QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy
G. Nelson, U. Boehm, S. Bagley, P. Bajcsy, J. Bischof, C.M. Brown, A. Dauphin, I.M. Dobbie, J.E. Eriksson, O. Faklaris, J. Fernandez-Rodriguez, A. Ferrand, L. Gelman, A. Gheisari, H. Hartmann, C. Kukat, A. Laude, M. Mitkovski, S. Munck, A.J. North, T.M. Rasse, U. Resch-Genger, L.C. Schuetz, A. Seitz, C. Strambio-De-Castillia, J.R. Swedlow, I. Alexopoulos, K. Aumayr, S. Avilov, G.J. Bakker, R.R. Bammann, A. Bassi, H. Beckert, S. Beer, Y. Belyaev, J. Bierwagen, K.A. Birngruber, M. Bosch, J. Breitlow, L.A. Cameron, J. Chalfoun, J.J. Chambers, C.L. Chen, E. Conde-Sousa, A.D. Corbett, F.P. Cordelieres, E.D. Nery, R. Dietzel, F. Eismann, E. Fazeli, A. Felscher, H. Fried, N. Gaudreault, W.I. Goh, T. Guilbert, R. Hadleigh, P. Hemmerich, G.A. Holst, M.S. Itano, C.B. Jaffe, H.K. Jambor, S.C. Jarvis, A. Keppler, D. Kirchenbuechler, M. Kirchner, N. Kobayashi, G. Krens, S. Kunis, J. Lacoste, M. Marcello, G.G. Martins, D.J. Metcalf, C.A. Mitchell, J. Moore, T. Mueller, M.S. Nelson, S. Ogg, S. Onami, A.L. Palmer, P. Paul-Gilloteaux, J.A. Pimentel, L. Plantard, S. Podder, E. Rexhepaj, A. Royon, M.A. Saari, D. Schapman, V. Schoonderwoert, B. Schroth-Diez, S. Schwartz, M. Shaw, M. Spitaler, M.T. Stoeckl, D. Sudar, J. Teillon, S. Terjung, R. Thuenauer, C.D. Wilms, G.D. Wright, R. Nitschke, Journal of Microscopy 284 (2021) 56–73.
LibreCat: https://research-explorer.ista.ac.at/record/9911
DOI: 10.1111/jmi.13041
WoS: 000683702700001

Neurotransmitter signaling regulates distinct phases of multimodal human interneuron migration
S. Bajaj, J.A. Bagley, C.M. Sommer, A. Vertesy, S. Nagumo Wong, V. Krenn, J. Lévi-Strauss, J.A. Knoblich, EMBO Journal 40 (2021).
LibreCat: https://research-explorer.ista.ac.at/record/10179
DOI: 10.15252/embj.2021108714
WoS: 000708012800001
PMID: 34661293

PIPEcloned human IgE and Ig antibodies: New tools for investigating cow's milk allergy and tolerance
C.L. Pranger, J. Singer, V.K. Köhler, I. PaliSchöll, A. Fiocchi, S.N. Karagiannis, O. Zenarruzabeitia, F. Borrego, E. JensenJarolim, Allergy 76 (2021) 1553–1556.
LibreCat: https://research-explorer.ista.ac.at/record/10836
DOI: 10.1111/all.14604
WoS: 000577708800001
PMID: 32990982

Nontopological zero-bias peaks in full-shell nanowires induced by flux-tunable Andreev states
M. Valentini, F. Peñaranda, A.C. Hofmann, M. Brauns, R. Hauschild, P. Krogstrup, P. San-Jose, E. Prada, R. Aguado, G. Katsaros, Science 373 (2021).
LibreCat: https://research-explorer.ista.ac.at/record/8910
DOI: 10.1126/science.abf1513
WoS: 000677843100034
arXiv: 2008.02348

Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development
J. Morandell, L.A. Schwarz, B. Basilico, S. Tasciyan, G.A. Dimchev, A. Nicolas, C.M. Sommer, C. Kreuzinger, C. Dotter, L. Knaus, Z. Dobler, E. Cacci, F.K. Schur, J.G. Danzl, G. Novarino, Nature Communications 12 (2021).
LibreCat: https://research-explorer.ista.ac.at/record/9429
DOI: 10.1038/s41467-021-23123-x
WoS: 000658769900010

Developmental roles of auxin binding protein 1 in Arabidopsis thaliana
Z. Gelová, M.C. Gallei, M. Pernisová, G. Brunoud, X. Zhang, M. Glanc, L. Li, J. Michalko, Z. Pavlovicova, I. Verstraeten, H. Han, J. Hajny, R. Hauschild, M. covanová, M. Zwiewka, L. Hörmayer, M. Fendrych, T. Xu, T. Vernoux, J. Friml, Plant Science 303 (2021).
LibreCat: https://research-explorer.ista.ac.at/record/8931
DOI: 10.1016/j.plantsci.2020.110750
WoS: 000614154500001
PMID: 33487339

Amplified centrosomes in dendritic cells promote immune cell effector functions
R. Hauschild, (2020).
LibreCat: https://research-explorer.ista.ac.at/record/8181
DOI: 10.15479/AT:ISTA:8181

RGtracker
R. Hauschild, (2020).
LibreCat: https://research-explorer.ista.ac.at/record/8294
DOI: 10.15479/AT:ISTA:8294

Microtubules control cellular shape and coherence in amoeboid migrating cells
A. Kopf, J. Renkawitz, R. Hauschild, I. Girkontaite, K. Tedford, J. Merrin, O. Thorn-Seshold, D. Trauner, H. Häcker, K.D. Fischer, E. Kiermaier, M.K. Sixt, The Journal of Cell Biology 219 (2020).
LibreCat: https://research-explorer.ista.ac.at/record/7875
DOI: 10.1083/jcb.201907154
WoS: 000538141100020
PMID: 32379884

Precision medicine in clinical oncology: the journey from IgG antibody to IgE
J. Singer, J. Singer, E. Jensen-Jarolim, Current Opinion in Allergy and Clinical Immunology 20 (2020) 282–289.
LibreCat: https://research-explorer.ista.ac.at/record/7864
DOI: 10.1097/ACI.0000000000000637
WoS: 000561358300010

Zebrafish embryonic explants undergo genetically encoded self-assembly
A. Schauer, D.C. Nunes Pinheiro, R. Hauschild, C.-P.J. Heisenberg, ELife 9 (2020).
LibreCat: https://research-explorer.ista.ac.at/record/7888
DOI: 10.7554/elife.55190
WoS: 000531544400001
PMID: 32250246

Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion
J. Slovakova, M.K. Sikora, S. Caballero Mancebo, G. Krens, W. Kaufmann, K. Huljev, C.-P.J. Heisenberg, BioRxiv (2020).
LibreCat: https://research-explorer.ista.ac.at/record/9750
DOI: 10.1101/2020.11.20.391284

Cellular locomotion using environmental topography
A. Reversat, F.R. Gärtner, J. Merrin, J.A. Stopp, S. Tasciyan, J.L. Aguilera Servin, I. de Vries, R. Hauschild, M. Hons, M. Piel, A. Callan-Jones, R. Voituriez, M.K. Sixt, Nature 582 (2020) 582–585.
LibreCat: https://research-explorer.ista.ac.at/record/7885
DOI: 10.1038/s41586-020-2283-z
WoS: 000532688300008

A practical guide to optimization in  expansion microscopy
S.M. Truckenbrodt, C.M. Sommer, S.O. Rizzoli, J.G. Danzl, Nature Protocols 14 (2019) 832–863.
LibreCat: https://research-explorer.ista.ac.at/record/6052
DOI: 10.1038/s41596-018-0117-3
WoS: 000459890700008
PMID: 30778205

A novel magnet-based scratch method for standardisation of wound-healing assays
M. Fenu, T. Bettermann, C. Vogl, N. Darwish-Miranda, J. Schramel, F. Jenner, I. Ribitsch, Scientific Reports 9 (2019).
LibreCat: https://research-explorer.ista.ac.at/record/6867
DOI: 10.1038/s41598-019-48930-7
WoS: 000483697800007
PMID: 31477739

Isolation of synaptic vesicles from genetically engineered cultured neurons
C. Mckenzie, M. Spanova, A.J. Johnson, S. Kainrath, V. Zheden, H.H. Sitte, H.L. Janovjak, Journal of Neuroscience Methods 312 (2019) 114–121.
LibreCat: https://research-explorer.ista.ac.at/record/7406
DOI: 10.1016/j.jneumeth.2018.11.018
WoS: 000456220900013
PMID: 30496761

Fluid dynamics during bleb formation in migrating cells in vivo
M. Goudarzi, A. Boquet-Pujadas, J.C. Olivo-Marin, E. Raz, PLOS ONE 14 (2019).
LibreCat: https://research-explorer.ista.ac.at/record/6093
DOI: 10.1371/journal.pone.0212699
WoS: 000459712100022

Nuclear positioning facilitates amoeboid migration along the path of least resistance
J. Renkawitz, A. Kopf, J.A. Stopp, I. de Vries, M.K. Driscoll, J. Merrin, R. Hauschild, E.S. Welf, G. Danuser, R. Fiolka, M.K. Sixt, Nature 568 (2019) 546–550.
LibreCat: https://research-explorer.ista.ac.at/record/6328
DOI: 10.1038/s41586-019-1087-5
WoS: 000465594200050
PMID: 30944468

Drosophila TNF modulates tissue tension in the embryo to facilitate macrophage invasive migration
A. Ratheesh, J. Bicher, M. Smutny, J. Veselá, E. Papusheva, G. Krens, W. Kaufmann, A. György, A.M. Casano, D.E. Siekhaus, Developmental Cell 45 (2018) 331–346.
LibreCat: https://research-explorer.ista.ac.at/record/308
DOI: 10.1016/j.devcel.2018.04.002
WoS: 000432461400009
PMID: 29738712

Fast and efficient genetic engineering of hematopoietic precursor cells for the study of dendritic cell migration
A.F. Leithner, J. Renkawitz, I. de Vries, R. Hauschild, H. Haecker, M.K. Sixt, European Journal of Immunology 48 (2018) 1074–1077.
LibreCat: https://research-explorer.ista.ac.at/record/437
DOI: 10.1002/eji.201747358
WoS: 000434963700016

Lymphatic exosomes promote dendritic cell migration along guidance cues
M. Brown, L. Johnson, D. Leone, P. Májek, K. Vaahtomeri, D. Senfter, N. Bukosza, H. Schachner, G. Asfour, B. Langer, R. Hauschild, K. Parapatics, Y. Hong, K. Bennett, R. Kain, M. Detmar, M.K. Sixt, D. Jackson, D. Kerjaschki, Journal of Cell Biology 217 (2018) 2205–2221.
LibreCat: https://research-explorer.ista.ac.at/record/275
DOI: 10.1083/jcb.201612051
WoS: 000438077800026
PMID: 29650776

Chemokines and integrins independently tune actin flow and substrate friction during intranodal migration of T cells
M. Hons, A. Kopf, R. Hauschild, A.F. Leithner, F.R. Gärtner, J. Abe, J. Renkawitz, J. Stein, M.K. Sixt, Nature Immunology 19 (2018) 606–616.
LibreCat: https://research-explorer.ista.ac.at/record/15
DOI: 10.1038/s41590-018-0109-z
WoS: 000433041500026
PMID: 29777221

Real-time analysis of auxin response, cell wall pH and elongation in Arabidopsis thaliana Hypocotyls
L. Li, G. Krens, M. Fendrych, J. Friml, Bio-Protocol 8 (2018).
LibreCat: https://research-explorer.ista.ac.at/record/442
DOI: 10.21769/BioProtoc.2685

Locally triggered release of the chemokine CCL21 promotes dendritic cell transmigration across lymphatic endothelia
K. Vaahtomeri, M. Brown, R. Hauschild, I. de Vries, A.F. Leithner, M. Mehling, W. Kaufmann, M.K. Sixt, Cell Reports 19 (2017) 902–909.
LibreCat: https://research-explorer.ista.ac.at/record/672
DOI: 10.1016/j.celrep.2017.04.027

Dendritic cells interpret haptotactic chemokine gradients in a manner governed by signal to noise ratio and dependent on GRK6
J. Schwarz, V. Bierbaum, K. Vaahtomeri, R. Hauschild, M. Brown, I. de Vries, A.F. Leithner, A. Reversat, J. Merrin, T. Tarrant, M.T. Bollenbach, M.K. Sixt, Current Biology 27 (2017) 1314–1325.
LibreCat: https://research-explorer.ista.ac.at/record/674
DOI: 10.1016/j.cub.2017.04.004

Load adaptation of lamellipodial actin networks
J. Mueller, G. Szep, M. Nemethova, I. de Vries, A. Lieber, C. Winkler, K. Kruse, J. Small, C. Schmeiser, K. Keren, R. Hauschild, M.K. Sixt, Cell 171 (2017) 188–200.
LibreCat: https://research-explorer.ista.ac.at/record/727
DOI: 10.1016/j.cell.2017.07.051
WoS: 000411331800020

Biased partitioning of the multidrug efflux pump AcrAB TolC underlies long lived phenotypic heterogeneity
T. Bergmiller, A.M. Andersson, K. Tomasek, E. Balleza, D. Kiviet, R. Hauschild, G. Tkadik, C.C. Guet, Science 356 (2017) 311–315.
LibreCat: https://research-explorer.ista.ac.at/record/665
DOI: 10.1126/science.aaf4762

Live tracking of moving samples in confocal microscopy for vertically grown roots
D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, J. Friml, ELife 6 (2017).
LibreCat: https://research-explorer.ista.ac.at/record/946
DOI: 10.7554/eLife.26792
WoS: 000404728300001

Light sheet fluorescence microscopy of plant roots growing on the surface of a gel
D. von Wangenheim, R. Hauschild, J. Friml, Journal of Visualized Experiments JoVE 2017 (2017).
LibreCat: https://research-explorer.ista.ac.at/record/1078
DOI: 10.3791/55044
WoS: 000397847200041

Interstitial fluid osmolarity modulates the action of differential tissue surface tension in progenitor cell segregation during gastrulation
G. Krens, J. Veldhuis, V. Barone, D. Capek, J.-L. Maître, W. Brodland, C.-P.J. Heisenberg, Development 144 (2017) 1798–1806.
LibreCat: https://research-explorer.ista.ac.at/record/676
DOI: 10.1242/dev.144964
PMID: 28512197

Friction forces position the neural anlage
M. Smutny, Z. Ákos, S. Grigolon, S. Shamipour, V. Ruprecht, D. Capek, M. Behrndt, E. Papusheva, M. Tada, B. Hof, T. Vicsek, G. Salbreux, C.-P.J. Heisenberg, Nature Cell Biology 19 (2017) 306–317.
LibreCat: https://research-explorer.ista.ac.at/record/661
DOI: 10.1038/ncb3492
PMID: 28346437

A microfluidic device for measuring cell migration towards substrate bound and soluble chemokine gradients
J. Schwarz, V. Bierbaum, J. Merrin, T. Frank, R. Hauschild, M.T. Bollenbach, S. Tay, M.K. Sixt, M. Mehling, Scientific Reports 6 (2016).
LibreCat: https://research-explorer.ista.ac.at/record/1154
DOI: 10.1038/srep36440

Diversified actin protrusions promote environmental exploration but are dispensable for locomotion of leukocytes
A.F. Leithner, A. Eichner, J. Müller, A. Reversat, M. Brown, J. Schwarz, J. Merrin, D. De Gorter, F.K. Schur, J. Bayerl, I. de Vries, S. Wieser, R. Hauschild, F. Lai, M. Moser, D. Kerjaschki, K. Rottner, V. Small, T. Stradal, M.K. Sixt, Nature Cell Biology 18 (2016) 1253–1259.
LibreCat: https://research-explorer.ista.ac.at/record/1321
DOI: 10.1038/ncb3426

Inhibition of cell expansion by rapid AB-mediated auxin effect on microtubules
X. Chen, L. Grandont, H. Li, R. Hauschild, S. Paque, A. Abuzeineh, H. Rakusova, E. Benková, C. Perrot Rechenmann, J. Friml, Nature 516 (2014) 90–93.
LibreCat: https://research-explorer.ista.ac.at/record/1862
DOI: 10.1038/nature13889
PMID: 25409144

Deterministic progenitor behavior and unitary production of neurons in the neocortex
P. Gao, M.P. Postiglione, T. Krieger, L. Hernandez, C. Wang, Z. Han, C. Streicher, E. Papusheva, R. Insolera, K. Chugh, O. Kodish, K. Huang, B. Simons, L. Luo, S. Hippenmeyer, S. Shi, Cell 159 (2014) 775–788.
LibreCat: https://research-explorer.ista.ac.at/record/2022
DOI: 10.1016/j.cell.2014.10.027

Interstitial dendritic cell guidance by haptotactic chemokine gradients
M. Weber, R. Hauschild, J. Schwarz, C. Moussion, I. de Vries, D. Legler, S. Luther, M.T. Bollenbach, M.K. Sixt, Science 339 (2013) 328–332.
LibreCat: https://research-explorer.ista.ac.at/record/2839
DOI: 10.1126/science.1228456

Forces driving epithelial spreading in zebrafish gastrulation
M. Behrndt, G. Salbreux, P. Campinho, R. Hauschild, F. Oswald, J. Roensch, S. Grill, C.-P.J. Heisenberg, Science 338 (2012) 257–260.
LibreCat: https://research-explorer.ista.ac.at/record/2950
DOI: 10.1126/science.1224143

Ilastik: Interactive learning and segmentation toolkit
C.M. Sommer, C. Straehle, U. Köthe, F.A. Hamprecht, in:, 2011 IEEE International Symposium on Biomedical Imaging: From Nano to Micro, Institute of Electrical and Electronics Engineers, 2011.
LibreCat: https://research-explorer.ista.ac.at/record/9943
DOI: 10.1109/isbi.2011.5872394

Spatial organization of adhesion: force-dependent regulation and function in tissue morphogenesis
E. Papusheva, C.-P.J. Heisenberg, EMBO Journal 29 (2010) 2753–2768.
LibreCat: https://research-explorer.ista.ac.at/record/4157
DOI: 10.1038/emboj.2010.182
PMID: 20717145