Zilberman, D. (2017). An evolutionary case for functional gene body methylation in plants and animals. Genome Biology. Springer Nature.https://doi.org/10.1186/s13059-017-1230-2 
LibreCat: https://research-explorer.ista.ac.at/record/9506
DOI: 10.1186/s13059-017-1230-2
PMID: 28486944

Huff, J. T., Zilberman, D., &; Roy, S. W. (2016). Mechanism for DNA transposons to generate introns on genomic scales. Nature. Springer Nature .https://doi.org/10.1038/nature20110 
LibreCat: https://research-explorer.ista.ac.at/record/9456
DOI: 10.1038/nature20110
PMID: 27760113

Park, K., Kim, M. Y., Vickers, M., Park, J.-S., Hyun, Y., Okamoto, T.,https://doi.org/10.1073/pnas.1619047114__Scholten, S. (2016). DNA demethylation is initiated in the central cells of Arabidopsis and rice. Proceedings of the National Academy of Sciences. National Academy of Sciences.https://doi.org/10.1073/pnas.1619047114 
LibreCat: https://research-explorer.ista.ac.at/record/9477
DOI: 10.1073/pnas.1619047114
PMID: 27956642

Hsieh, P.-H., He, S., Buttress, T., Gao, H., Couchman, M., Fischer, R. L.,https://doi.org/10.1073/pnas.1619074114__Feng, X. (2016). Arabidopsis male sexual lineage exhibits more robust maintenance of CG methylation than somatic tissues. Proceedings of the National Academy of Sciences. National Academy of Sciences.https://doi.org/10.1073/pnas.1619074114 
LibreCat: https://research-explorer.ista.ac.at/record/9473
DOI: 10.1073/pnas.1619074114
PMID: 27956643

Rodrigues, J. A., &; Zilberman, D. (2015). Evolution and function of genomic imprinting in plants. Genes and Development. Cold Spring Harbor Laboratory Press.https://doi.org/10.1101/gad.269902.115 
LibreCat: https://research-explorer.ista.ac.at/record/9532
DOI: 10.1101/gad.269902.115
PMID: 26680300

Kim, M. Y., &; Zilberman, D. (2014). DNA methylation as a system of plant genomic immunity. Trends in Plant Science. Elsevier.https://doi.org/10.1016/j.tplants.2014.01.014 
LibreCat: https://research-explorer.ista.ac.at/record/9519
DOI: 10.1016/j.tplants.2014.01.014
PMID: 24618094 

Huff, J. T., &; Zilberman, D. (2014). Dnmt1-independent CG methylation contributes to nucleosome positioning in diverse eukaryotes. Cell. Elsevier.https://doi.org/10.1016/j.cell.2014.01.029 
LibreCat: https://research-explorer.ista.ac.at/record/9458
DOI: 10.1016/j.cell.2014.01.029
PMID: 24630728

Mérai, Z., Chumak, N., García-Aguilar, M., Hsieh, T.-F., Nishimura, T., Schoft, V. K.,https://doi.org/10.1073/pnas.1418564111__Tamaru, H. (2014). The AAA-ATPase molecular chaperone Cd/ disassembles sumoylated centromeres, decondenses heterochromatin, and activates ribosomal RNA genes. Proceedings of the National Academy of Sciences. National Academy of Sciences.https://doi.org/10.1073/pnas.1418564111 
LibreCat: https://research-explorer.ista.ac.at/record/9479
DOI: 10.1073/pnas.1418564111
PMID: 25344531

Zemach, A., Kim, M. Y., Hsieh, P.-H., Coleman-Derr, D., Eshed-Williams, L., Thao, K.,https://doi.org/10.1016/j.cell.2013.02.033__Zilberman, D. (2013). The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access -containing heterochromatin. Cell. Elsevier.https://doi.org/10.1016/j.cell.2013.02.033 
LibreCat: https://research-explorer.ista.ac.at/record/9459
DOI: 10.1016/j.cell.2013.02.033
PMID: 23540698

Rodrigues, J. A., Ruan, R., Nishimura, T., Sharma, M. K., Sharma, R., Ronald, P. C.,https://doi.org/10.1073/pnas.1306164110__Zilberman, D. (2013). Imprinted expression of genes and small RNA is associated with localized hypomethylation of the maternal genome in rice endosperm. Proceedings of the National Academy of Sciences. National Academy of Sciences.https://doi.org/10.1073/pnas.1306164110 
LibreCat: https://research-explorer.ista.ac.at/record/9481
DOI: 10.1073/pnas.1306164110
PMID: 23613580

Feng, X., Zilberman, D., &; Dickinson, H. (2013). A conversation across generations: Soma-germ cell crosstalk in plants. Developmental Cell. Elsevier.https://doi.org/10.1016/j.devcel.2013.01.014 
LibreCat: https://research-explorer.ista.ac.at/record/9520
DOI: 10.1016/j.devcel.2013.01.014
PMID: 23410937

Ibarra, C. A., Feng, X., Schoft, V. K., Hsieh, T.-F., Uzawa, R., Rodrigues, J. A.,https://doi.org/10.1126/science.1224839__Zilberman, D. (2012). Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes. Science. American Association for the Advancement of Science.https://doi.org/10.1126/science.1224839 
LibreCat: https://research-explorer.ista.ac.at/record/9451
DOI: 10.1126/science.1224839
PMID: 22984074

Coleman-Derr, D., &; Zilberman, D. (2012). DNA methylation, A.Z, and the regulation of constitutive expression. Cold Spring Harbor Symposia on Quantitative Biology. Cold Spring Harbor Laboratory Press.https://doi.org/10.1101/sqb.2012.77.014944 
LibreCat: https://research-explorer.ista.ac.at/record/9535
DOI: 10.1101/sqb.2012.77.014944
PMID: 23250988

Kim, S. Y., Lee, J., Eshed-Williams, L., Zilberman, D., &; Sung, Z. R. (2012). EM and PR cooperate to repress key regulators of Arabidopsis development. PLoS Genetics. Public Library of Science.https://doi.org/10.1371/journal.pgen.1002512 
LibreCat: https://research-explorer.ista.ac.at/record/9499
DOI: 10.1371/journal.pgen.1002512
PMID: 22457632

Coleman-Derr, D., &; Zilberman, D. (2012). Deposition of histone variant A.Z within gene bodies regulates responsive genes. PLoS Genetics. Public Library of Science.https://doi.org/10.1371/journal.pgen.1002988 
LibreCat: https://research-explorer.ista.ac.at/record/9497
DOI: 10.1371/journal.pgen.1002988
PMID: 23071449

Huff, J. T., &; Zilberman, D. (2012). Regulation of biological accuracy, precision, and memory by plant chromatin organization. Current Opinion in Genetics and Development. Elsevier.https://doi.org/10.1016/j.gde.2012.01.007 
LibreCat: https://research-explorer.ista.ac.at/record/9528
DOI: 10.1016/j.gde.2012.01.007
PMID: 22336527

Hsieh, T.-F., Shin, J., Uzawa, R., Silva, P., Cohen, S., Bauer, M. J.,https://doi.org/10.1073/pnas.1019273108__Fischer, R. L. (2011). Regulation of imprinted gene expression in Arabidopsis endosperm. Proceedings of the National Academy of Sciences. National Academy of Sciences.https://doi.org/10.1073/pnas.1019273108 
LibreCat: https://research-explorer.ista.ac.at/record/9483
DOI: 10.1073/pnas.1019273108
PMID: 21257907

Zilberman, D. (2011). Balancing parental contributions in plant embryonic gene activation. Developmental Cell (Vol. 20, pp. 735–736). Elsevier.https://doi.org/10.1016/j.devcel.2011.05.018 
LibreCat: https://research-explorer.ista.ac.at/record/9522
DOI: 10.1016/j.devcel.2011.05.018
PMID: 21664571

Zemach, A., Kim, M. Y., Silva, P., Rodrigues, J. A., Dotson, B., Brooks, M. D., &; Zilberman, D. (2010). Local DNA hypomethylation activates genes in rice endosperm. Proceedings of the National Academy of Sciences. National Academy of Sciences.https://doi.org/10.1073/pnas.1009695107 
LibreCat: https://research-explorer.ista.ac.at/record/9485
DOI: 10.1073/pnas.1009695107
PMID: 20937895

Zemach, A., &; Zilberman, D. (2010). Evolution of eukaryotic DNA methylation and the pursuit of safer sex. Current Biology. Elsevier.https://doi.org/10.1016/j.cub.2010.07.007 
LibreCat: https://research-explorer.ista.ac.at/record/9489
DOI: 10.1016/j.cub.2010.07.007
PMID: 20833323