Zilberman, Daniel. “An Evolutionary Case for Functional Gene Body Methylation in Plants and Animals.”https://doi.org/10.1186/s13059-017-1230-2__Genome Biology. Springer Nature, 2017.https://doi.org/10.1186/s13059-017-1230-2 .
LibreCat: https://research-explorer.ista.ac.at/record/9506
DOI: 10.1186/s13059-017-1230-2
PMID: 28486944

Huff, Jason T., Daniel Zilberman, and Scott W. Roy. “Mechanism for DNA Transposons to Generate Introns on Genomic Scales.”https://doi.org/10.1038/nature20110__Nature. Springer Nature , 2016.https://doi.org/10.1038/nature20110 .
LibreCat: https://research-explorer.ista.ac.at/record/9456
DOI: 10.1038/nature20110
PMID: 27760113

Park, Kyunghyuk, M. Yvonne Kim, Martin Vickers, Jin-Sup Park, Youbong Hyun, Takashi Okamoto, Daniel Zilberman, et al. “DNA Demethylation Is Initiated in the Central Cells of Arabidopsis and Rice.”https://doi.org/10.1073/pnas.1619047114__Proceedings of the National Academy of Sciences. National Academy of Sciences, 2016.https://doi.org/10.1073/pnas.1619047114 .
LibreCat: https://research-explorer.ista.ac.at/record/9477
DOI: 10.1073/pnas.1619047114
PMID: 27956642

Hsieh, Ping-Hung, Shengbo He, Toby Buttress, Hongbo Gao, Matthew Couchman, Robert L. Fischer, Daniel Zilberman, and Xiaoqi Feng. “Arabidopsis Male Sexual Lineage Exhibits More Robust Maintenance of CG Methylation than Somatic Tissues.”https://doi.org/10.1073/pnas.1619074114__Proceedings of the National Academy of Sciences. National Academy of Sciences, 2016.https://doi.org/10.1073/pnas.1619074114 .
LibreCat: https://research-explorer.ista.ac.at/record/9473
DOI: 10.1073/pnas.1619074114
PMID: 27956643

Rodrigues, Jessica A., and Daniel Zilberman. “Evolution and Function of Genomic Imprinting in Plants.”https://doi.org/10.1101/gad.269902.115__Genes and Development. Cold Spring Harbor Laboratory Press, 2015.https://doi.org/10.1101/gad.269902.115 .
LibreCat: https://research-explorer.ista.ac.at/record/9532
DOI: 10.1101/gad.269902.115
PMID: 26680300

Kim, M. Yvonne, and Daniel Zilberman. “DNA Methylation as a System of Plant Genomic Immunity.”https://doi.org/10.1016/j.tplants.2014.01.014__Trends in Plant Science. Elsevier, 2014.https://doi.org/10.1016/j.tplants.2014.01.014 .
LibreCat: https://research-explorer.ista.ac.at/record/9519
DOI: 10.1016/j.tplants.2014.01.014
PMID: 24618094 

Huff, Jason T., and Daniel Zilberman. “Dnmt1-Independent CG Methylation Contributes to Nucleosome Positioning in Diverse Eukaryotes.”https://doi.org/10.1016/j.cell.2014.01.029__Cell. Elsevier, 2014.https://doi.org/10.1016/j.cell.2014.01.029 .
LibreCat: https://research-explorer.ista.ac.at/record/9458
DOI: 10.1016/j.cell.2014.01.029
PMID: 24630728

Mérai, Zsuzsanna, Nina Chumak, Marcelina García-Aguilar, Tzung-Fu Hsieh, Toshiro Nishimura, Vera K. Schoft, János Bindics, et al. “The AAA-ATPase Molecular Chaperone Cd/ Disassembles Sumoylated Centromeres, Decondenses Heterochromatin, and Activates Ribosomal RNA Genes.”https://doi.org/10.1073/pnas.1418564111__Proceedings of the National Academy of Sciences. National Academy of Sciences, 2014.https://doi.org/10.1073/pnas.1418564111 .
LibreCat: https://research-explorer.ista.ac.at/record/9479
DOI: 10.1073/pnas.1418564111
PMID: 25344531

Zemach, Assaf, M. Yvonne Kim, Ping-Hung Hsieh, Devin Coleman-Derr, Leor Eshed-Williams, Ka Thao, Stacey L. Harmer, and Daniel Zilberman. “The Arabidopsis Nucleosome Remodeler DDM1 Allows DNA Methyltransferases to Access -Containing Heterochromatin.”https://doi.org/10.1016/j.cell.2013.02.033__Cell. Elsevier, 2013.https://doi.org/10.1016/j.cell.2013.02.033 .
LibreCat: https://research-explorer.ista.ac.at/record/9459
DOI: 10.1016/j.cell.2013.02.033
PMID: 23540698

Rodrigues, Jessica A., Randy Ruan, Toshiro Nishimura, Manoj K. Sharma, Rita Sharma, Pamela C Ronald, Robert L. Fischer, and Daniel Zilberman. “Imprinted Expression of Genes and Small RNA Is Associated with Localized Hypomethylation of the Maternal Genome in Rice Endosperm.”https://doi.org/10.1073/pnas.1306164110__Proceedings of the National Academy of Sciences. National Academy of Sciences, 2013.https://doi.org/10.1073/pnas.1306164110 .
LibreCat: https://research-explorer.ista.ac.at/record/9481
DOI: 10.1073/pnas.1306164110
PMID: 23613580

Feng, Xiaoqi, Daniel Zilberman, and Hugh Dickinson. “A Conversation across Generations: Soma-Germ Cell Crosstalk in Plants.”https://doi.org/10.1016/j.devcel.2013.01.014__Developmental Cell. Elsevier, 2013.https://doi.org/10.1016/j.devcel.2013.01.014 .
LibreCat: https://research-explorer.ista.ac.at/record/9520
DOI: 10.1016/j.devcel.2013.01.014
PMID: 23410937

Ibarra, Christian A., Xiaoqi Feng, Vera K. Schoft, Tzung-Fu Hsieh, Rie Uzawa, Jessica A. Rodrigues, Assaf Zemach, et al. “Active DNA Demethylation in Plant Companion Cells Reinforces Transposon Methylation in Gametes.”https://doi.org/10.1126/science.1224839__Science. American Association for the Advancement of Science, 2012.https://doi.org/10.1126/science.1224839 .
LibreCat: https://research-explorer.ista.ac.at/record/9451
DOI: 10.1126/science.1224839
PMID: 22984074

Coleman-Derr, D., and Daniel Zilberman. “DNA Methylation, A.Z, and the Regulation of Constitutive Expression.”https://doi.org/10.1101/sqb.2012.77.014944__Cold Spring Harbor Symposia on Quantitative Biology. Cold Spring Harbor Laboratory Press, 2012.https://doi.org/10.1101/sqb.2012.77.014944 .
LibreCat: https://research-explorer.ista.ac.at/record/9535
DOI: 10.1101/sqb.2012.77.014944
PMID: 23250988

Kim, Sang Yeol, Jungeun Lee, Leor Eshed-Williams, Daniel Zilberman, and Z. Renee Sung. “EM and PR Cooperate to Repress Key Regulators of Arabidopsis Development.”https://doi.org/10.1371/journal.pgen.1002512__PLoS Genetics. Public Library of Science, 2012.https://doi.org/10.1371/journal.pgen.1002512 .
LibreCat: https://research-explorer.ista.ac.at/record/9499
DOI: 10.1371/journal.pgen.1002512
PMID: 22457632

Coleman-Derr, Devin, and Daniel Zilberman. “Deposition of Histone Variant A.Z within Gene Bodies Regulates Responsive Genes.”https://doi.org/10.1371/journal.pgen.1002988__PLoS Genetics. Public Library of Science, 2012.https://doi.org/10.1371/journal.pgen.1002988 .
LibreCat: https://research-explorer.ista.ac.at/record/9497
DOI: 10.1371/journal.pgen.1002988
PMID: 23071449

Huff, Jason T., and Daniel Zilberman. “Regulation of Biological Accuracy, Precision, and Memory by Plant Chromatin Organization.”https://doi.org/10.1016/j.gde.2012.01.007__Current Opinion in Genetics and Development. Elsevier, 2012.https://doi.org/10.1016/j.gde.2012.01.007 .
LibreCat: https://research-explorer.ista.ac.at/record/9528
DOI: 10.1016/j.gde.2012.01.007
PMID: 22336527

Hsieh, Tzung-Fu, Juhyun Shin, Rie Uzawa, Pedro Silva, Stephanie Cohen, Matthew J. Bauer, Meryl Hashimoto, et al. “Regulation of Imprinted Gene Expression in Arabidopsis Endosperm.”https://doi.org/10.1073/pnas.1019273108__Proceedings of the National Academy of Sciences. National Academy of Sciences, 2011.https://doi.org/10.1073/pnas.1019273108 .
LibreCat: https://research-explorer.ista.ac.at/record/9483
DOI: 10.1073/pnas.1019273108
PMID: 21257907

Zilberman, Daniel. Balancing Parental Contributions in Plant Embryonic Gene Activation. Developmental Cell. Vol. 20. Elsevier, 2011.https://doi.org/10.1016/j.devcel.2011.05.018 .
LibreCat: https://research-explorer.ista.ac.at/record/9522
DOI: 10.1016/j.devcel.2011.05.018
PMID: 21664571

Zemach, Assaf, M. Yvonne Kim, Pedro Silva, Jessica A. Rodrigues, Bradley Dotson, Matthew D. Brooks, and Daniel Zilberman. “Local DNA Hypomethylation Activates Genes in Rice Endosperm.”https://doi.org/10.1073/pnas.1009695107__Proceedings of the National Academy of Sciences. National Academy of Sciences, 2010.https://doi.org/10.1073/pnas.1009695107 .
LibreCat: https://research-explorer.ista.ac.at/record/9485
DOI: 10.1073/pnas.1009695107
PMID: 20937895

Zemach, Assaf, and Daniel Zilberman. “Evolution of Eukaryotic DNA Methylation and the Pursuit of Safer Sex.”https://doi.org/10.1016/j.cub.2010.07.007__Current Biology. Elsevier, 2010.https://doi.org/10.1016/j.cub.2010.07.007 .
LibreCat: https://research-explorer.ista.ac.at/record/9489
DOI: 10.1016/j.cub.2010.07.007
PMID: 20833323