Unterweger IA, Klepstad J, Hannezo EB, Lundegaard PR, Trusina A, Ober EA. 2023. Lineage tracing identifies heterogeneous hepatoblast contribution to cell lineages and postembryonic organ growth dynamics. PLoS Biology. 21(10), e3002315.
LibreCat: https://research-explorer.ista.ac.at/record/14426
DOI: 10.1371/journal.pbio.3002315

Brückner D, Chen H, Barinov L, Zoller B, Gregor T. 2023. Stochastic motion and transcriptional dynamics of pairs of distal DNA loci on a compacted chromosome. Science. 380(6652), 1357–1362.
LibreCat: https://research-explorer.ista.ac.at/record/13261
DOI: 10.1126/science.adf5568
WoS: 001106405600028

Ucar MC, Hannezo EB, Tiilikainen E, Liaqat I, Jakobsson E, Nurmi H, Vaahtomeri K. 2023. Self-organized and directed branching results in optimal coverage in developing dermal lymphatic networks. Nature Communications. 14, 5878.
LibreCat: https://research-explorer.ista.ac.at/record/14378
DOI: 10.1038/s41467-023-41456-7
WoS: 001075884500007
PMID: 37735168

Alanko JH, Ucar MC, Canigova N, Stopp JA, Schwarz J, Merrin J, Hannezo EB, Sixt MK. 2023. CC acts as both a sensor and a sink for CCL19 to coordinate collective leukocyte migration. Science Immunology. 8(87), ad84.
LibreCat: https://research-explorer.ista.ac.at/record/14274
DOI: 10.1126/sciimmunol.adc9584
WoS: 001062110600003
PMID: 37656776

Corominas-Murtra B, Hannezo EB. 2023. Modelling the dynamics of mammalian gut homeostasis. Seminars in Cell &; Developmental Biology. 150–151, 58–65.
LibreCat: https://research-explorer.ista.ac.at/record/12162
DOI: 10.1016/j.semcdb.2022.11.005
WoS: 001053522200001
PMID: 36470715

Schwayer C, Brückner D. 2023. Connecting theory and experiment in cell and tissue mechanics. Journal of Cell Science. 136(24), jcs. 261515.
LibreCat: https://research-explorer.ista.ac.at/record/14827
DOI: 10.1242/jcs.261515
PMID: 38149871

Grober D, Palaia I, Ucar MC, Hannezo EB, Sari A, Palacci JA. 2023. Unconventional colloidal aggregation in chiral bacterial baths. Nature Physics. 19, 1680–1688.
LibreCat: https://research-explorer.ista.ac.at/record/13971
DOI: 10.1038/s41567-023-02136-x
WoS: 001037346400005

Dunajova Z, Prats Mateu B, Radler P, Lim K, Brandis D, Velicky P, Danzl JG, Wong RW, Elgeti J, Hannezo EB, Loose M. 2023. Chiral and nematic phases of flexible active filaments, Institute of Science and Technology Austria,10.15479/AT:ISTA:13116 .
LibreCat: https://research-explorer.ista.ac.at/record/13116
DOI: 10.15479/AT:ISTA:13116

Dunajova Z, Prats Mateu B, Radler P, Lim K, Brandis D, Velicky P, Danzl JG, Wong RW, Elgeti J, Hannezo EB, Loose M. 2023. Chiral and nematic phases of flexible active filaments. Nature Physics. 19, 1916–1926.
LibreCat: https://research-explorer.ista.ac.at/record/13314
DOI: 10.1038/s41567-023-02218-w
PMID: 38075437

Assen FP, Abe J, Hons M, Hauschild R, Shamipour S, Kaufmann W, Costanzo T, Krens G, Brown M, Ludewig B, Hippenmeyer S, Heisenberg C-PJ, Weninger W, Hannezo EB, Luther SA, Stein JV, Sixt MK. 2022. Multitier mechanics control stromal adaptations in swelling lymph nodes. Nature Immunology. 23, 1246–1255.
LibreCat: https://research-explorer.ista.ac.at/record/9794
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Zisis T, Brückner D, Brandstätter T, Siow WX, d’Alessandro J, Vollmar AM, Broedersz CP, Zahler S. 2022. Disentangling cadherin-mediated cell-cell interactions in collective cancer cell migration. Biophysical Journal. 121(1), -60.
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Hannezo EB, Heisenberg C-PJ. 2022. Rigidity transitions in development and disease. Trends in Cell Biology. 32(5), 3-444.
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PMID: 35058104

Yanagida A, Corujo-Simon E, Revell CK, Sahu P, Stirparo GG, Aspalter IM, Winkel AK, Peters R, De Belly H, Cassani DAD, Achouri S, Blumenfeld R, Franze K, Hannezo EB, Paluch EK, Nichols J, Chalut KJ. 2022. Cell surface fluctuations regulate early embryonic lineage sorting. Cell. 185(5), 777–793.e20.
LibreCat: https://research-explorer.ista.ac.at/record/10825
DOI: 10.1016/j.cell.2022.01.022
WoS: 000796293700007
PMID: 35196500

Nunes Pinheiro DC, Kardos R, Hannezo EB, Heisenberg C-PJ. 2022. Morphogen gradient orchestrates pattern-preserving tissue morphogenesis via motility-driven unjamming. Nature Physics. 18(12), 1482–1493.
LibreCat: https://research-explorer.ista.ac.at/record/12209
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WoS: 000871319900002

Randriamanantsoa S, Papargyriou A, Maurer HC, Peschke K, Schuster M, Zecchin G, Steiger K, Öllinger R, Saur D, Scheel C, Rad R, Hannezo EB, Reichert M, Bausch AR. 2022. Spatiotemporal dynamics of self-organized branching in pancreas-derived organoids. Nature Communications. 13, 5219.
LibreCat: https://research-explorer.ista.ac.at/record/12217
DOI: 10.1038/s41467-022-32806-y
WoS: 000850348400025

Stock J, Kazmar T, Schlumm F, Hannezo EB, Pauli A. 2022. A self-generated Toddler gradient guides mesodermal cell migration. Science Advances. 8(37), eadd2488.
LibreCat: https://research-explorer.ista.ac.at/record/12253
DOI: 10.1126/sciadv.add2488
WoS: 000888875000009
PMID: 36103529

Brückner D, Schmitt M, Fink A, Ladurner G, Flommersfeld J, Arlt N, Hannezo EB, Rädler JO, Broedersz CP. 2022. Geometry adaptation of protrusion and polarity dynamics in confined cell migration. Physical Review X. 12(3), 031041.
LibreCat: https://research-explorer.ista.ac.at/record/12277
DOI: 10.1103/physrevx.12.031041
WoS: 000861534700001
arXiv: 2106.01014

Azkanaz M, Corominas-Murtra B, Ellenbroek SIJ, Bruens L, Webb AT, Laskaris D, Oost KC, Lafirenze SJA, Annusver K, Messal HA, Iqbal S, Flanagan DJ, Huels DJ, Rojas-Rodríguez F, Vizoso M, Kasper M, Sansom OJ, Snippert HJ, Liberali P, Simons BD, Katajisto P, Hannezo EB, van Rheenen J. 2022. Retrograde movements determine effective stem cell numbers in the intestine. Nature. 607(7919), 548–554.
LibreCat: https://research-explorer.ista.ac.at/record/12274
DOI: 10.1038/s41586-022-04962-0
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PMID: 35831497

Randriamanantsoa S, Papargyriou A, Maurer C, Peschke K, Schuster M, Zecchin G, Steiger K, Öllinger R, Saur D, Scheel C, Rad R, Hannezo EB, Reichert M, Bausch AR. 2021. Spatiotemporal dynamics of self-organized branching in pancreas-derived organoids, Zenodo,10.5281/ZENODO.5148117 .
LibreCat: https://research-explorer.ista.ac.at/record/13068
DOI: 10.5281/ZENODO.5148117

Boocock DR, Hino N, Ruzickova N, Hirashima T, Hannezo EB. 2021. Theory of mechanochemical patterning and optimal migration in cell monolayers. Nature Physics. 17, 267–274.
LibreCat: https://research-explorer.ista.ac.at/record/8602
DOI: 10.1038/s41567-020-01037-7
WoS: 000573519500002

Hankeova S, Salplachta J, Zikmund T, Kavkova M, Van Hul N, Brinek A, Smekalova V, Laznovsky J, Dawit F, Jaros J, Bryja V, Lendahl U, Ellis E, Nemeth A, Fischler B, Hannezo EB, Kaiser J, Andersson ER. 2021. DUCT reveals architectural mechanisms contributing to bile duct recovery in a mouse model for alagille syndrome. eLife. 10, e60916.
LibreCat: https://research-explorer.ista.ac.at/record/9244
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PMID: 33635272

Dobramysl U, Jarsch IK, Inoue Y, Shimo H, Richier B, Gadsby JR, Mason J, Szaapak A, Ioannou PS, Correia GP, Walrant A, Butler R, Hannezo EB, Simons BD, Gallop JL. 2021. Stochastic combinations of actin regulatory proteins are sufficient to drive filopodia formation. Journal of Cell Biology. 220(4), e202003052.
LibreCat: https://research-explorer.ista.ac.at/record/9306
DOI: 10.1083/jcb.202003052
WoS: 000663160600002
PMID: 33740033

Petridou N, Corominas-Murtra B, Heisenberg C-PJ, Hannezo EB. 2021. Rigidity percolation uncovers a structural basis for embryonic tissue phase transitions. Cell. 184(7), 1914–1928.e19.
LibreCat: https://research-explorer.ista.ac.at/record/9316
DOI: 10.1016/j.cell.2021.02.017
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PMID: 33730596

Lenne PF, Munro E, Heemskerk I, Warmflash A, Bocanegra L, Kishi K, Kicheva A, Long Y, Fruleux A, Boudaoud A, Saunders TE, Caldarelli P, Michaut A, Gros J, Maroudas-Sacks Y, Keren K, Hannezo EB, Gartner ZJ, Stormo B, Gladfelter A, Rodrigues A, Shyer A, Minc N, Maître JL, Di Talia S, Khamaisi B, Sprinzak D, Tlili S. 2021. Roadmap for the multiscale coupling of biochemical and mechanical signals during development. Physical biology. 18(4), 041501.
LibreCat: https://research-explorer.ista.ac.at/record/9349
DOI: 10.1088/1478-3975/abd0db
WoS: 000640396400001
PMID: 33276350

Yang Q, Xue S, Chan CJ, Rempfler M, Vischi D, Maurer-Gutierrez F, Hiiragi T, Hannezo EB, Liberali P. 2021. Cell fate coordinates mechano-osmotic forces in intestinal crypt formation. Nature Cell Biology. 23, 733–744.
LibreCat: https://research-explorer.ista.ac.at/record/9629
DOI: 10.1038/s41556-021-00700-2
WoS: 000664016300003
PMID: 34155381

Chaigne A, Smith MB, Cavestany RL, Hannezo EB, Chalut KJ, Paluch EK. 2021. Three-dimensional geometry controls division symmetry in stem cell colonies. Journal of Cell Science. 134(14), j18.
LibreCat: https://research-explorer.ista.ac.at/record/9952
DOI: 10.1242/jcs.255018
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Sahu P, Schwarz JM, Manning ML. 2021. Geometric signatures of tissue surface tension in a three-dimensional model of confluent tissue. New Journal of Physics. 23(9), 093043.
LibreCat: https://research-explorer.ista.ac.at/record/10178
DOI: 10.1088/1367-2630/ac23f1
WoS: 000702042400001
arXiv: 2102.05397

Ucar MC, Kamenev D, Sunadome K, Fachet DC, Lallemend F, Adameyko I, Hadjab S, Hannezo EB. 2021. Theory of branching morphogenesis by local interactions and global guidance. Nature Communications. 12, 6830.
LibreCat: https://research-explorer.ista.ac.at/record/10402
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PMID: 34819507

Ucar MC. 2021. Source data for the manuscript ‘Theory of branching morphogenesis by local interactions and global guidance’, Zenodo,10.5281/ZENODO.5257160 .
LibreCat: https://research-explorer.ista.ac.at/record/13058
DOI: 10.5281/ZENODO.5257160

Munjal A, Hannezo EB, Tsai TYC, Mitchison TJ, Megason SG. 2021. Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis. Cell. 184(26), 6313–6325.e18.
LibreCat: https://research-explorer.ista.ac.at/record/10573
DOI: 10.1016/j.cell.2021.11.025
WoS: 000735387500002

Luciano M, Xue S, De Vos WH, Redondo-Morata L, Surin M, Lafont F, Hannezo EB, Gabriele S. 2021. Cell monolayers sense curvature by exploiting active mechanics and nuclear mechanoadaptation. Nature Physics. 17(12), 1382–1390.
LibreCat: https://research-explorer.ista.ac.at/record/10365
DOI: 10.1038/s41567-021-01374-1
WoS: 000720204300004

Ucar MC, Lipowsky R. 2020. Collective force generation by molecular motors is determined by strain-induced unbinding. Nano Letters. 20(1), 669–676.
LibreCat: https://research-explorer.ista.ac.at/record/7166
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PMID: 31797672

Ucar MC, Lipowsky R. 2020. MURL_Dataz, American Chemical Society ,10.1021/acs.nanolett.9b04445.s002 .
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Kolchinsky A, Corominas-Murtra B. 2020. Decomposing information into copying versus transformation. Journal of the Royal Society Interface. 17(162), 0623.
LibreCat: https://research-explorer.ista.ac.at/record/7431
DOI: 10.1098/rsif.2019.0623
WoS: 000538369800002
PMID: 31964273
arXiv: 1903.10693

Dekoninck S, Hannezo EB, Sifrim A, Miroshnikova YA, Aragona M, Malfait M, Gargouri S, De Neunheuser C, Dubois C, Voet T, Wickström SA, Simons BD, Blanpain C. 2020. Defining the design principles of skin epidermis postnatal growth. Cell. 181(3), 604–620.e22.
LibreCat: https://research-explorer.ista.ac.at/record/7789
DOI: 10.1016/j.cell.2020.03.015
WoS: 000530708400016
PMID: 32259486

Corominas-Murtra B, Scheele CLGJ, Kishi K, Ellenbroek SIJ, Simons BD, Van Rheenen J, Hannezo EB. 2020. Stem cell lineage survival as a noisy competition for niche access. Proceedings of the National Academy of Sciences of the United States of America. 117(29), 16969–16975.
LibreCat: https://research-explorer.ista.ac.at/record/8220
DOI: 10.1073/pnas.1921205117
WoS: 000553292900014
PMID: 32611816

Sznurkowska MK, Hannezo EB, Azzarelli R, Chatzeli L, Ikeda T, Yoshida S, Philpott A, Simons BD. 2020. Tracing the cellular basis of islet specification in mouse pancreas. Nature Communications. 11, 5037.
LibreCat: https://research-explorer.ista.ac.at/record/8669
DOI: 10.1038/s41467-020-18837-3
WoS: 000577244600003
PMID: 33028844

Chaigne A, Labouesse C, White IJ, Agnew M, Hannezo EB, Chalut KJ, Paluch EK. 2020. Abscission couples cell division to embryonic stem cell fate. Developmental Cell. 55(2), 195–208.
LibreCat: https://research-explorer.ista.ac.at/record/8672
DOI: 10.1016/j.devcel.2020.09.001
WoS: 000582501100012
PMID: 32979313

Ucar MC, Lipowsky R. 2019. Supplementary information - Collective force generation by molecular motors is determined by strain-induced unbinding, American Chemical Society ,10.1021/acs.nanolett.9b04445.s001 .
LibreCat: https://research-explorer.ista.ac.at/record/9726
DOI: 10.1021/acs.nanolett.9b04445.s001

Corominas-Murtra B. 2019. Thermodynamics of duplication thresholds in synthetic protocell systems. Life. 9(1), 9.
LibreCat: https://research-explorer.ista.ac.at/record/5944
DOI: 10.3390/life9010009
WoS: 000464125500001

Recho P, Hallou A, Hannezo EB. 2019. Theory of mechanochemical patterning in biphasic biological tissues. Proceedings of the National Academy of Sciences of the United States of America. 116(12), 5344–5349.
LibreCat: https://research-explorer.ista.ac.at/record/6191
DOI: 10.1073/pnas.1813255116
WoS: 000461679000027
PMID: 30819884

Guiu J, Hannezo EB, Yui S, Demharter S, Ulyanchenko S, Maimets M, Jørgensen A, Perlman S, Lundvall L, Mamsen LS, Larsen A, Olesen RH, Andersen CY, Thuesen LL, Hare KJ, Pers TH, Khodosevich K, Simons BD, Jensen KB. 2019. Tracing the origin of adult intestinal stem cells. Nature. 570, 107–111.
LibreCat: https://research-explorer.ista.ac.at/record/6513
DOI: 10.1038/s41586-019-1212-5
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PMID: 31092921

Hannezo EB, Simons BD. 2019. Multiscale dynamics of branching morphogenesis. Current Opinion in Cell Biology. 60, 99–105.
LibreCat: https://research-explorer.ista.ac.at/record/6559
DOI: 10.1016/j.ceb.2019.04.008
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PMID: 31181348

Hannezo EB, Heisenberg C-PJ. 2019. Mechanochemical feedback loops in development and disease. Cell. 178(1), 12–25.
LibreCat: https://research-explorer.ista.ac.at/record/6601
DOI: 10.1016/j.cell.2019.05.052
WoS: 000473002700005
PMID: 31251912

Krndija D, Marjou FE, Guirao B, Richon S, Leroy O, Bellaiche Y, Hannezo EB, Vignjevic DM. 2019. Active cell migration is critical for steady-state epithelial turnover in the gut. Science. 365(6454), 705–710.
LibreCat: https://research-explorer.ista.ac.at/record/6832
DOI: 10.1126/science.aau3429
WoS: 000481688700050
PMID: 31416964

Petridou N, Grigolon S, Salbreux G, Hannezo EB, Heisenberg C-PJ. 2019. Fluidization-mediated tissue spreading by mitotic cell rounding and non-canonical Wnt signalling. Nature Cell Biology. 21, 169–178.
LibreCat: https://research-explorer.ista.ac.at/record/5789
DOI: 10.1038/s41556-018-0247-4
WoS: 000457468300011
PMID: 30559456

Shamipour S, Kardos R, Xue S, Hof B, Hannezo EB, Heisenberg C-PJ. 2019. Bulk actin dynamics drive phase segregation in zebrafish oocytes. Cell. 177(6), 1463–1479.e18.
LibreCat: https://research-explorer.ista.ac.at/record/6508
DOI: 10.1016/j.cell.2019.04.030
WoS: 000469415100013
PMID: 31080065

Qin X, Hannezo EB, Mangeat T, Liu C, Majumder P, Liu J, Choesmel Cadamuro V, Mcdonald J, Liu Y, Yi B, Wang X. 2018. A biochemical network controlling basal myosin oscillation. Nature Communications. 9(1), 1210.
LibreCat: https://research-explorer.ista.ac.at/record/401
DOI: 10.1038/s41467-018-03574-5
WoS: 000428165400009

Lilja A, Rodilla V, Huyghe M, Hannezo EB, Landragin C, Renaud O, Leroy O, Rulands S, Simons B, Fré S. 2018. Clonal analysis of Notc-expressing cells reveals the existence of unipotent stem cells that retain long-term plasticity in the embryonic mammary gland. Nature Cell Biology. 20(6), 677–687.
LibreCat: https://research-explorer.ista.ac.at/record/288
DOI: 10.1038/s41556-018-0108-1
WoS: 000433237300003
PMID: 29784917

Sznurkowska M, Hannezo EB, Azzarelli R, Rulands S, Nestorowa S, Hindley C, Nichols J, Göttgens B, Huch M, Philpott A, Simons B. 2018. Defining lineage potential and fate behavior of precursors during pancreas development. Developmental Cell. 46(3), 360–375.
LibreCat: https://research-explorer.ista.ac.at/record/132
DOI: 10.1016/j.devcel.2018.06.028
WoS: 000441327300012

Hannezo EB, Simons BD. 2018. Statistical theory of branching morphogenesis. Development Growth and Differentiation. 60(9), 512–521.
LibreCat: https://research-explorer.ista.ac.at/record/5787
DOI: 10.1111/dgd.12570
WoS: 000453555100002

Dasbiswas K, Hannezo EB, Gov N. 2018. Theory of eppithelial cell shape transitions induced by mechanoactive chemical gradients. Biophysical Journal. 114(4), 968–977.
LibreCat: https://research-explorer.ista.ac.at/record/421
DOI: 10.1016/j.bpj.2017.12.022
WoS: 000428016700021
arXiv: 1709.01486

Corominas-Murtra B, Seoane LF, Solé R. 2018. Zipf’s Law, unbounded complexity and open-ended evolution. Journal of the Royal Society Interface. 15(149), 20180395.
LibreCat: https://research-explorer.ista.ac.at/record/5860
DOI: 10.1098/rsif.2018.0395
WoS: 000456783800002
arXiv: 1612.01605

Corominas-Murtra B, Fibla MS, Valverde S, Solé R. 2018. Chromatic transitions in the emergence of syntax networks. Royal Society Open Science. 5(12), 181286.
LibreCat: https://research-explorer.ista.ac.at/record/5859
DOI: 10.1098/rsos.181286
WoS: 000456566500027
PMID: 30662738

Deliu E, Arecco N, Morandell J, Dotter C, Contreras X, Girardot C, Käsper E, Kozlova A, Kishi K, Chiaradia I, Noh K, Novarino G. 2018. Haploinsufficiency of the intellectual disability gene SET disturbs developmental gene expression and cognition. Nature Neuroscience. 21(12), 1717–1727.
LibreCat: https://research-explorer.ista.ac.at/record/3
DOI: 10.1038/s41593-018-0266-2
WoS: 000451324700010

Hannezo EB, Scheele C, Moad M, Drogo N, Heer R, Sampogna R, Van Rheenen J, Simons B. 2017. A unifying theory of branching morphogenesis. Cell. 171(1), 242–255.
LibreCat: https://research-explorer.ista.ac.at/record/726
DOI: 10.1016/j.cell.2017.08.026
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