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Mechanical forces in plant tissue matrix orient cell divisions via microtubule stabilization
L. Hörmayer, J.C. Montesinos López, N. Trozzi, L. Spona, S. Yoshida, P. Marhavá, S. Caballero Mancebo, E. Benková, C.-P.J. Heisenberg, Y. Dagdas, M. Majda, J. Friml, Dev Cell (2024) 34-5807(24)00177–1.
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ZnUMBA - a live imaging method to detect local barrier breaches
T. Higashi, R.E. Stephenson, C. Schwayer, K. Huljev, A.Y. Higashi, C.-P.J. Heisenberg, H. Chiba, A.L. Miller, Journal of Cell Science 136 (2023).
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Nitrate, auxin and cytokinin - a trio to tango
R. Abualia, S. Riegler, E. Benková, Cells 12 (2023).
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Molecular framework integrating nitrate sensing in root and auxin-guided shoot adaptive responses
R. Abualia, K. Ötvös, O. Novák, E. Bouguyon, K. Domanegg, A. Krapp, P. Nacry, A. Gojon, B. Lacombe, E. Benková, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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AB–TMK auxin perception for global phosphorylation and auxin canalization
J. Friml, M.C. Gallei, Z. Gelová, A.J. Johnson, E. Mazur, A. Monzer, L. Rodriguez Solovey, M. Roosjen, I. Verstraeten, B.D. divanovi, M. Zou, L. Fiedler, C. Giannini, P. Grones, M. Hrtyan, W. Kaufmann, A. Kuhn, M. Narasimhan, M. Randuch, N. Rýdza, K. Takahashi, S. Tan, A. Teplova, T. Kinoshita, D. Weijers, H. Rakusová, Nature 609 (2022) 575–581.
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Modulation of auxin transport via ZF proteins adjust plant response to high ambient temperature
C. Artner, Modulation of Auxin Transport via ZF Proteins Adjust Plant Response to High Ambient Temperature, Institute of Science and Technology Austria, 2022.
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Cellular requirements for PIN polar cargo clustering in Arabidopsis thaliana
H. Li, D. von Wangenheim, X. Zhang, S. Tan, N. Darwish-Miranda, S. Naramoto, K.T. Wabnik, R. de Rycke, W. Kaufmann, D.J. Gütl, R. Tejos, P. Grones, M. Ke, X. Chen, J. Dettmer, J. Friml, New Phytologist 229 (2021) 351–369.
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Pickle recruits retinoblastoma related 1 to control lateral root formation in arabidopsis
K. Ötvös, P. Miskolczi, P. Marhavý, A. Cruz-Ramírez, E. Benková, S. Robert, L. Bakó, International Journal of Molecular Sciences 22 (2021).
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A coupled mechano-biochemical model for cell polarity guided anisotropic root growth
M. Marconi, M. Gallemi, E. Benková, K. Wabnik, ELife 10 (2021).
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Auxin-regulated lateral root organogenesis
N. Cavallari, C. Artner, E. Benková, Cold Spring Harbor Perspectives in Biology 13 (2021).
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Xyloglucan remodeling defines auxin-dependent differential tissue expansion in plants
S.M. Velasquez, X. Guo, M. Gallemi, B. Aryal, P. Venhuizen, E. Barbez, K.A. Dünser, M. Darino, A. PM7ndík, O. Novák, M. Kalyna, G. Mouille, E. Benková, R.P. Bhalerao, J. Mravec, J. Kleine-Vehn, International Journal of Molecular Sciences 22 (2021).
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The TPLATE complex mediates membrane bending during plant clathrin-mediated endocytosis
A.J. Johnson, D.A. Dahhan, N. Gnyliukh, W. Kaufmann, V. Zheden, T. Costanzo, P. Mahou, M. Hrtyan, J. Wang, J.L. Aguilera Servin, D. van Damme, E. Beaurepaire, M. Loose, S.Y. Bednarek, J. Friml, Proceedings of the National Academy of Sciences 118 (2021).
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Targeting alternative splicing by RNAi: From the differential impact on splice variants to triggering artificial pre-mRNA splicing
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Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport
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Nitrate triggered phosphoproteome changes and a PIN2 phosphosite modulating root system architecture
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Role of hormones in nitrate regulated growth
R. Abualia, Role of Hormones in Nitrate Regulated Growth, Institute of Science and Technology Austria, 2021.
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Molecular mechanisms of the cytokinin-regulated endomembrane trafficking to coordinate plant organogenesis
H. Semerádová, Molecular Mechanisms of the Cytokinin-Regulated Endomembrane Trafficking to Coordinate Plant Organogenesis, Institute of Science and Technology Austria, 2021.
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Thermo-sensitive alternative splicing of FLOWERING LOCUS M is modulated by cyclin-dependent kinase 
C. Nibau, M. Gallemi, D. Dadarou, J.H. Doonan, N. Cavallari, Frontiers in Plant Science 10 (2020).
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Synergistic on Auxin and Cytokinin 1 positively regulates growth and attenuates soil pathogen resistance
A. Hurny, C. Cuesta, N. Cavallari, K. Ötvös, J. Duclercq, L. Dokládal, J.C. Montesinos López, M. Gallemi, H. Semerádová, T. Rauter, I. Stenzel, G. Persiau, F. Benade, R. Bhalearo, E. Sýkorová, A. Gorzsás, J. Sechet, G. Mouille, I. Heilmann, G. De Jaeger, J. Ludwig-Müller, E. Benková, Nature Communications 11 (2020).
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The Arabidopsis NR.1 transceptor coordinately controls auxin biosynthesis and transport to regulate root branching in response to nitrate
A. Maghiaoui, E. Bouguyon, C. Cuesta, F. Perrine-Walker, C. Alcon, G. Krouk, E. Benková, P. Nacry, A. Gojon, L. Bach, Journal of Experimental Botany 71 (2020) 4480–4494.
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Cytokinin fluoroprobe reveals multiple sites of cytokinin perception at plasma membrane and endoplasmic reticulum
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A functional kinase is necessary for cyclin-dependent kinase  (CDK) to maintain fertility at high ambient temperature in Arabidopsis
C. Nibau, D. Dadarou, N. Kargios, A. Mallioura, N. Fernandez-Fuentes, N. Cavallari, J.H. Doonan, Frontiers in Plant Science 11 (2020).
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Phytohormone cytokinin guides microtubule dynamics during cell progression from proliferative to differentiated stage
J.C. Montesinos López, A. Abuzeineh, A. Kopf, A. Juanes Garcia, K. Ötvös, J. Petrásek, M.K. Sixt, E. Benková, The Embo Journal 39 (2020).
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TOLs function as ubiquitin receptors in the early steps of the ESCRT pathway in higher plants
J. Moulinier-Anzola, M. Schwihla, L. De-Araújo, C. Artner, L. Jörg, N. Konstantinova, C. Luschnig, B. Korbei, Molecular Plant 13 (2020) 717–731.
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Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots
L. Hörmayer, J.C. Montesinos López, P. Marhavá, E. Benková, S. Yoshida, J. Friml, Proceedings of the National Academy of Sciences 117 (2020).
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Salicylic acid targets protein phosphatase 2A to attenuate growth in plants
S. Tan, M.F. Abas, I. Verstraeten, M. Glanc, G. Molnar, J. Hajny, P. Lasák, I. Petík, E. Russinova, J. Petrásek, O. Novák, J. Pospísil, J. Friml, Current Biology 30 (2020) 381–395.e8.
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All roads lead to auxin: Post-translational regulation of auxin transport by multiple hormonal pathways
H. Semerádová, J.C. Montesinos López, E. Benková, Plant Communications 1 (2020).
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A SOSEKI-based coordinate system interprets global polarity cues in arabidopsis
S. Yoshida, A. Van Der Schuren, M. Van Dop, L. Van Galen, S. Saiga, M. Adibi, B. Möller, C.A. Ten Hove, P. Marhavý, R. Smith, J. Friml, D. Weijers, Nature Plants 5 (2019) 160–166.
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Root gravity response module guides differential growth determining both root bending and apical hook formation in Arabidopsis
Q. Zhu, M. Gallemi, J. Pospísil, P. dádníková, M. Strnad, E. Benková, Development 146 (2019).
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Ethylene and cytokinin - partners in root growth regulation
C. Artner, E. Benková, Molecular Plant 12 (2019) 1312–1314.
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Editorial overview: Cell biology in the era of omics?
E. Benková, Y. Dagdas, Current Opinion in Plant Biology 52 (2019) –.
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Re-activation of stem cell pathways for pattern restoration in plant wound healing
P. Marhavá, L. Hörmayer, S. Yoshida, P. Marhavý, E. Benková, J. Friml, Cell 177 (2019) 957–969.e13.
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An armadillo-domain protein participates in a telomerase interaction network
L. Dokládal, E. Benková, D. Honys, N. Dupláková, L. Lee, S. Gelvin, E. Sýkorová, Plant Molecular Biology 97 (2018) 407–420.
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Cup-shaped Cotyledon1 (CU) and C regulate cytokinin homeostasis to determine ovule number in arabidopsis
M. Cucinotta, S. Manrique, C. Cuesta, E. Benková, O. Novák, L. Colombo, Journal of Experimental Botany 69 (2018) 5169–5176.
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Design, synthesis and perception of fluorescently labeled isoprenoid cytokinins
K. Kubiasová, V. Mik, J. Nisler, M. Hönig, A. Husidková, L. Spíchal, Z. Pbkná, O. Samajová, K. Doleeal, O. Plíhal, E. Benková, M. Strnad, L. Plíhalová, Phytochemistry 150 (2018) 1–11.
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Mutations in blind cavefish target the light regulated circadian clock gene period 2
R.M. Ceinos, E. Frigato, C. Pagano, N. Frohlich, P. Negrini, N. Cavallari, D. Vallone, S. Fuselli, C. Bertolucci, N.S. Foulkes, Scientific Reports 8 (2018).
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The cyclindependent kinase G group defines a thermosensitive alternative splicing circuit modulating the expression of Arabidopsis ATU 2AF 65A
N. Cavallari, C. Nibau, A. Fuchs, D. Dadarou, A. Barta, J. Doonan, The Plant Journal 94 (2018) 1010–1022.
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Identification and characterization of novel auxin-cytokinin cross-talk components
A. Hurny, Identification and Characterization of Novel Auxin-Cytokinin Cross-Talk Components, Institute of Science and Technology Austria, 2018.
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PID/WAG-mediated phosphorylation of the Arabidopsis PIN3 auxin transporter mediates polarity switches during gravitropism
P. Grones, M.F. Abas, J. Hajny, A. Jones, S. Waidmann, J. Kleine Vehn, J. Friml, Scientific Reports 8 (2018).
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Transporters and mechanisms of hormone transport in arabidopsis
R. Abualia, E. Benková, B. Lacombe, Advances in Botanical Research 87 (2018) 115–138.
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Light regulated expression of sensor histidine kinase CK controls cytokinin related development
T. Dobisova, V. Hrdinova, C. Cuesta, S. Michlickova, I. Urbankova, R. Hejatkova, P. Zadnikova, M. Pernisová, E. Benková, J. Hejátko, Plant Physiology 174 (2017) 387–404.
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Spatiotemporal mechanisms of root branching
K. Ötvös, E. Benková, Current Opinion in Genetics &; Development 45 (2017) 82–89.
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Live tracking of moving samples in confocal microscopy for vertically grown roots
D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, J. Friml, ELife 6 (2017).
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Methodological advances in auxin and cytokinin biology
A. Hurny, E. Benková, Auxins and Cytokinins in Plant Biology 1569 (2017) 1–29.
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Cellular mechanisms for cargo delivery and polarity maintenance at different polar domains in plant cells
. angowski, K.T. Wabnik, H. Li, S. Vanneste, S. Naramoto, H. Tanaka, J. Friml, Cell Discovery 2 (2016).
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A model of differential growth guided apical hook formation in plants
P. dádníková, K.T. Wabnik, A. Abuzeineh, M. Gallemí, D. Van Der Straeten, R. Smith, D. Inze, J. Friml, P. Prusinkiewicz, E. Benková, Plant Cell 28 (2016) 2464–2477.
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Cytokinin response factors integrate auxin and cytokinin pathways for female reproductive organ development
M. Cucinotta, S. Manrique, A. Guazzotti, N. Quadrelli, M. Mendes, E. Benková, L. Colombo, Development 143 (2016) 4419–4424.
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Real time analysis of the apical hook development
Q. Zhu, P. dádníková, D. Smet, D. Van Der Straeten, E. Benková, in:, Plant Hormones, Humana Press, 2016, pp. 1–8.
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DRACUL is a dynamic nucleoporin with a role in regulating the shade avoidance syndrome in Arabidopsis
M. Gallemi, A. Galstyan, S. Paulisi, C. Then, A. Ferrández Ayela, L. Lorenzo Orts, I. Roig Villanova, X. Wang, J. Micol, M. Ponce, P. Devlin, J. Martínez García, Development 143 (2016) 1623–1631.
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Sorting motifs involved in the trafficking and localization of the PIN1 auxin efflux carrier
G. Sancho Andrés, E. Soriano Ortega, C. Gao, J. Bernabé Orts, M. Narasimhan, A. Müller, R. Tejos, L. Jiang, J. Friml, F. Aniento, M. Marcote, Plant Physiology 171 (2016) 1965–1982.
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Mapping the subcellular mechanical properties of live cells in tissues with fluorescence emission-Brillouin imaging
K. Elsayad, S. Werner, M. Gallemi, J. Kong, E. Guajardo, L. Zhang, Y. Jaillais, T. Greb, Y. Belkhadir, Science Signaling 9 (2016).
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Plant hormones in interactions with the environment
E. Benková, Plant Molecular Biology 91 (2016) 597.
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Lateral root emergence in Arabidopsis is dependent on transcription factor LB regulation of auxin influx carrier LA
S. Porco, A. Larrieu, Y. Du, A. Gaudinier, T. Goh, K. Swarup, R. Swarup, B. Kuempers, A. Bishopp, J. Lavenus, I. Casimiro, K. Hill, E. Benková, H. Fukaki, S. Brady, B. Scheres, B. Peéet, M. Bennett, Development 143 (2016) 3340–3349.
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Nitrate controls root development through posttranscriptional regulation of the NR.1/NP.3 transporter sensor
E. Bouguyon, F. Perrine Walker, M. Pervent, J. Rochette, C. Cuesta, E. Benková, A. Martinière, L. Bach, G. Krouk, A. Gojon, P. Nacry, Plant Physiology 172 (2016) 1237–1248.
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Seedlings’ strategy to overcome a soil barrier
Q. Zhu, E. Benková, Trends in Plant Science 21 (2016) 809–811.
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Cytokinin response factor 6 represses cytokinin-associated genes during oxidative stress
P. Zwack, I. De Clercq, T. Howton, H.T. Hallmark, A. Hurny, E. Keshishian, A. Parish, E. Benková, M.S. Mukhtar, F. Van Breusegem, A. Rashotte, Plant Physiology 172 (2016) 1249–1258.
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Targeted cell elimination reveals an auxin-guided biphasic mode of lateral root initiation
P. Marhavý, J.C. Montesinos López, A. Abuzeineh, D. Van Damme, J. Vermeer, J. Duclercq, H. Rakusova, P. Marhavá, J. Friml, N. Geldner, E. Benková, Genes and Development 30 (2016) 471–483.
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Vascular cambium regeneration and vessel formation in wounded inflorescence stems of Arabidopsis
E. Mazur, E. Benková, J. Friml, Scientific Reports 6 (2016).
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The importance of localized auxin production for morphogenesis of reproductive organs and embryos in Arabidopsis
H. Robert, L. Crhák Khaitová, S. Mroue, E. Benková, Journal of Experimental Botany 66 (2015) 5029–5042.
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A coherent transcriptional feed-forward motif model for mediating auxin-sensitive PIN3 expression during lateral root development
Q. Chen, Y. Liu, S. Maere, E. Lee, G. Van Isterdael, Z. Xie, W. Xuan, J. Lucas, V. Vassileva, S. Kitakura, P. Marhavý, K.T. Wabnik, N. Geldner, E. Benková, J. Le, H. Fukaki, E. Grotewold, C. Li, J. Friml, F. Sack, T. Beeckman, S. Vanneste, Nature Communications 6 (2015).
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Strategies of seedlings to overcome their sessile nature: Auxin in mobility control
P. dádníková, D. Smet, Q. Zhu, D. Van Der Straeten, E. Benková, Frontiers in Plant Science 6 (2015).
LibreCat: https://research-explorer.ista.ac.at/record/1593
DOI: 10.3389/fpls.2015.00218

Cytokinin response factors regulate PIN-FORMED auxin transporters
M. Simásková, J. O’Brien, M. Khan-Djamei, G. Van Noorden, K. Ötvös, A. Vieten, I. De Clercq, J. Van Haperen, C. Cuesta, K. Hoyerová, S. Vanneste, P. Marhavý, K.T. Wabnik, F. Van Breusegem, M. Nowack, A. Murphy, J. Friml, D. Weijers, T. Beeckman, E. Benková, Nature Communications 6 (2015).
LibreCat: https://research-explorer.ista.ac.at/record/1640
DOI: 10.1038/ncomms9717

Auxin and Its Role in Plant Development
E. Zaeímalová, J. Petrásek, E. Benková, eds., Auxin and Its Role in Plant Development, 1st ed., Springer Nature, Vienna, 2014.
LibreCat: https://research-explorer.ista.ac.at/record/10811
DOI: 10.1007/978-3-7091-1526-8

Inhibition of cell expansion by rapid AB-mediated auxin effect on microtubules
X. Chen, L. Grandont, H. Li, R. Hauschild, S. Paque, A. Abuzeineh, H. Rakusova, E. Benková, C. Perrot Rechenmann, J. Friml, Nature 516 (2014) 90–93.
LibreCat: https://research-explorer.ista.ac.at/record/1862
DOI: 10.1038/nature13889
PMID: 25409144

Dynamic infrared imaging analysis of apical hook development in Arabidopsis: The case of brassinosteroids
D. Smet, P. dádníková, F. Vandenbussche, E. Benková, D. Van Der Straeten, New Phytologist 202 (2014) 1398–1411.
LibreCat: https://research-explorer.ista.ac.at/record/1922
DOI: 10.1111/nph.12751

Cytokinin controls polarity of PIN1-dependent Auxin transport during lateral root organogenesis
P. Marhavý, J. Duclercq, B. Weller, E. Feraru, A. Bielach, R. Offringa, J. Friml, C. Schwechheimer, A. Murphy, E. Benková, Current Biology 24 (2014) 1031–1037.
LibreCat: https://research-explorer.ista.ac.at/record/1934
DOI: 10.1016/j.cub.2014.04.002

The influence of heat stress on auxin distribution in transgenic B napus microspores and microspore derived embryos
E. Dubas, J. Moravdíková, J. Libantová, I. Matusíková, E. Benková, I. Zur, M. Krzewska, Protoplasma 251 (2014) 1077–1087.
LibreCat: https://research-explorer.ista.ac.at/record/2059
DOI: 10.1007/s00709-014-0616-1

Allopolyploid origin of the Balkan endemic Ranunculus wettsteinii (Ranunculaceae) inferred from nuclear and plastid DNA sequences
E. Cires Rodriguez, M. Baltisberger, C. Cuesta, P. Vargas, J. Prieto, Organisms Diversity and Evolution 14 (2014) 1–10.
LibreCat: https://research-explorer.ista.ac.at/record/2227
DOI: 10.1007/s13127-013-0150-6

Role of the Arabidopsis PIN6 auxin transporter in auxin homeostasis and auxin-mediated development
C. Cazzonelli, M. Vanstraelen, S. Simon, K. Yin, A. Carron Arthur, N. Nisar, G. Tarle, A. Cuttriss, I. Searle, E. Benková, U. Mathesius, J. Masle, J. Friml, B. Pogson, PLoS One 8 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/2472
DOI: 10.1371/journal.pone.0070069

An auxin transport mechanism restricts positive orthogravitropism in lateral roots
M. Rosquete, D. von Wangenheim, P. Marhavý, E. Barbez, E. Stelzer, E. Benková, A. Maizel, J. Kleine Vehn, Current Biology 23 (2013) 817–822.
LibreCat: https://research-explorer.ista.ac.at/record/2844
DOI: 10.1016/j.cub.2013.03.064

Auxin reflux between the endodermis and pericycle promotes lateral root initiation
P. Marhavý, M. Vanstraelen, B. De Rybel, D. Zhaojun, M. Bennett, T. Beeckman, E. Benková, EMBO Journal 32 (2013) 149–158.
LibreCat: https://research-explorer.ista.ac.at/record/2880
DOI: 10.1038/emboj.2012.303
PMID: 23178590

Modeling framework for the establishment of the apical-basal embryonic axis in plants
K.T. Wabnik, H. Robert, R. Smith, J. Friml, Current Biology 23 (2013) 2513–2518.
LibreCat: https://research-explorer.ista.ac.at/record/527
DOI: 10.1016/j.cub.2013.10.038

Cytokinin cross talking during biotic and abiotic stress responses
J. O’Brien, E. Benková, Frontiers in Plant Science 4 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/827
DOI: 10.3389/fpls.2013.00451

Systems approaches to study root architecture dynamics
C. Cuesta, K.T. Wabnik, E. Benková, Frontiers in Plant Science 4 (2013).
LibreCat: https://research-explorer.ista.ac.at/record/828
DOI: 10.3389/fpls.2013.00537