A statistical summary of segment libraries and sequencing results
V. Pokusaeva, D.R. Usmanova, E.V. Putintseva, L. Espinar, K. Sarkisyan, A.S. Mishin, N.S. Bogatyreva, D. Ivankov, A. Akopyan, S. Avvakumov, I.S. Povolotskaya, G.J. Filion, L.B. Carey, F. Kondrashov, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9790
DOI: 10.1371/journal.pgen.1008079.s011

A statistical summary of segment libraries and sequencing results
V. Pokusaeva, D.R. Usmanova, E.V. Putintseva, L. Espinar, K. Sarkisyan, A.S. Mishin, N.S. Bogatyreva, D. Ivankov, A. Akopyan, I.S. Povolotskaya, G.J. Filion, L.B. Carey, F. Kondrashov, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9797
DOI: 10.1371/journal.pgen.1008079.s011

Multiple alignment of Hi orthologues
V. Pokusaeva, D.R. Usmanova, E.V. Putintseva, L. Espinar, K. Sarkisyan, A.S. Mishin, N.S. Bogatyreva, D. Ivankov, A. Akopyan, S. Avvakumov, I.S. Povolotskaya, G.J. Filion, L.B. Carey, F. Kondrashov, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9789
DOI: 10.1371/journal.pgen.1008079.s010

Chance and pleiotropy dominate genetic diversity in complex bacterial environments
L. Noda-García, D. Davidi, E. Korenblum, A. Elazar, E. Putintseva, A. Aharoni, D.S. Tawfik, Nature Microbiology 4 (2019) 1221–1230.
LibreCat: https://research-explorer.ista.ac.at/record/6506
DOI: 10.1038/s41564-019-0412-y
WoS: 000480348200017

Additional file 11 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O. Sigalova, A. Chaplin, O. Bochkareva, P. Shelyakin, V. Filaretov, E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9731
DOI: 10.6084/m9.figshare.9808772.v1

Additional file 10 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9783
DOI: 10.6084/m9.figshare.9808760.v1

Additional file 20 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9897
DOI: 10.6084/m9.figshare.9808850.v1

Additional file 15 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9890
DOI: 10.6084/m9.figshare.9808802.v1

Additional file 16 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9892
DOI: 10.6084/m9.figshare.9808814.v1

Additional file 17 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9893
DOI: 10.6084/m9.figshare.9808820.v1

Additional file 18 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9894
DOI: 10.6084/m9.figshare.9808826.v1

Additional file 19 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9895
DOI: 10.6084/m9.figshare.9808835.v1

Additional file 1 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9896
DOI: 10.6084/m9.figshare.9808841.v1

Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, BMC Genomics 20 (2019).
LibreCat: https://research-explorer.ista.ac.at/record/6898
DOI: 10.1186/s12864-019-6059-5
WoS: 000485256100001

Additional file 21 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9898
DOI: 10.6084/m9.figshare.9808859.v1

Additional file 9 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9901
DOI: 10.6084/m9.figshare.9808907.v1

Additional file 2 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9899
DOI: 10.6084/m9.figshare.9808865.v1

Additional file 5 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
LibreCat: https://research-explorer.ista.ac.at/record/9900
DOI: 10.6084/m9.figshare.9808886.v1

Large multiple sequence alignments with a root-to-leaf regressive method
E. Garriga, P. Di Tommaso, C. Magis, I. Erb, L. Mansouri, A. Baltzis, H. Laayouni, F. Kondrashov, E. Floden, C. Notredame, Nature Biotechnology 37 (2019) 1466–1470.
LibreCat: https://research-explorer.ista.ac.at/record/7181
DOI: 10.1038/s41587-019-0333-6
WoS: 000500748900021
PMID: 31792410

Fast and accurate large multiple sequence alignments with a root-to-leaf regressive method
E. Garriga, P. di Tommaso, C. Magis, I. Erb, L. Mansouri, A. Baltzis, H. Laayouni, F. Kondrashov, E. Floden, C. Notredame, (2018).
LibreCat: https://research-explorer.ista.ac.at/record/13059
DOI: 10.5281/ZENODO.2025846