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Hledik, M. (2024). Genetic information and biological optimization. Institute of Science and Technology Austria.https://doi.org/10.15479/at:ista:15020 
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Casillas Perez, B. E., Bodova, K., Grasse, A. V., Tkadik, G., &; Cremer, S. (2023). Dynamic pathogen detection and social feedback shape collective hygiene in ants. Nature Communications. Springer Nature.https://doi.org/10.1038/s41467-023-38947-y 
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Lombardi, F., Pepic, S., Shriki, O., Tkadik, G., &; De Martino, D. (2023). Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain. Nature Computational Science. Springer Nature.https://doi.org/10.1038/s43588-023-00410-9 
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Reinhardt, M., Tkadik, G., &; Ten Wolde, P. R. (2023). Path weight sampling: Exact Monte Carlo computation of the mutual information between stochastic trajectories. Physical Review X. American Physical Society.https://doi.org/10.1103/PhysRevX.13.041017 
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Scarpetta, S., Morrisi, N., Mutti, C., Azzi, N., Trippi, I., Ciliento, R.,https://doi.org/10.1016/j.isci.2023.107840__Vaudano, A. E. (2023). Criticality of neuronal avalanches in human sleep and their relationship with sleep macro- and micro-architecture. IScience. Elsevier.https://doi.org/10.1016/j.isci.2023.107840 
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Lombardi, F., Herrmann, H. J., Parrino, L., Plenz, D., Scarpetta, S., Vaudano, A. E.,https://doi.org/10.1016/j.celrep.2023.113162__Shriki, O. (2023). Beyond pulsed inhibition: Alpha oscillations modulate attenuation and amplification of neural activity in the awake resting state. Cell Reports. Elsevier.https://doi.org/10.1016/j.celrep.2023.113162 
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Nardin, M., Csicsvari, J. L., Tkadik, G., &; Savin, C. (2023). The structure of hippocampal C interactions optimizes spatial coding across experience. The Journal of Neuroscience. Society of Neuroscience.https://doi.org/10.1523/JNEUROSCI.0194-23.2023 
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Lombardi, F., Herrmann, H. J., Parrino, L., Plenz, D., Scarpetta, S., Vaudano, A. E.,https://doi.org/10.1101/2022.03.03.482657__Shriki, O. (2022). Alpha rhythm induces attenuation-amplification dynamics in neural activity cascades. bioRxiv. Cold Spring Harbor Laboratory.https://doi.org/10.1101/2022.03.03.482657 
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Ngampruetikorn, V., Sachdeva, V., Torrence, J., Humplik, J., Schwab, D. J., &; Palmer, S. E. (2022). Inferring couplings in networks across order-disorder phase transitions. Physical Review Research. American Physical Society.https://doi.org/10.1103/PhysRevResearch.4.023240 
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Zoller, B., Gregor, T., &; Tkadik, G. (2022). Eukaryotic gene regulation at equilibrium, or non? Current Opinion in Systems Biology. Elsevier.https://doi.org/10.1016/j.coisb.2022.100435 
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Zisis, T., Brückner, D., Brandstätter, T., Siow, W. X., d’Alessandro, J., Vollmar, A. M.,https://doi.org/10.1016/j.bpj.2021.12.006__Zahler, S. (2022). Disentangling cadherin-mediated cell-cell interactions in collective cancer cell migration. Biophysical Journal. Elsevier.https://doi.org/10.1016/j.bpj.2021.12.006 
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Lagator, M., Sarikas, S., Steinrueck, M., Toledo-Aparicio, D., Bollback, J. P., Guet, C. C., &; Tkadik, G. (2022). Predicting bacterial promoter function and evolution from random sequences. ELife. eLife Sciences Publications.https://doi.org/10.7554/eLife.64543 
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Mlynarski, W. F., &; Tkadik, G. (2022). Efficient coding theory of dynamic attentional modulation. PLoS Biology. Public Library of Science.https://doi.org/10.1371/journal.pbio.3001889 
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Hledik, M., Barton, N. H., &; Tkadik, G. (2022). Accumulation and maintenance of information in evolution. Proceedings of the National Academy of Sciences. Proceedings of the National Academy of Sciences.https://doi.org/10.1073/pnas.2123152119 
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Bodova, K., Szep, E., &; Barton, N. H. (2021). Dynamic maximum entropy provides accurate approximation of structured population dynamics. PLoS Computational Biology. Public Library of Science.https://doi.org/10.1371/journal.pcbi.1009661 
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Lombardi, F., Pepic, S., Shriki, O., Tkadik, G., &; De Martino, D. (n.d.). Quantifying the coexistence of neuronal oscillations and avalanches. arXiv.https://doi.org/10.48550/ARXIV.2108.06686 
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arXiv: 2108.06686

Kavcic, B., &; Tkadik, G. (n.d.). Token-driven totally asymmetric simple exclusion process. arXiv.https://doi.org/10.48550/arXiv.2112.13558 
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Lombardi, F., Shriki, O., Herrmann, H. J., &; de Arcangelis, L. (2021). Long-range temporal correlations in the broadband resting state activity of the human brain revealed by neuronal avalanches. Neurocomputing. Elsevier.https://doi.org/10.1016/j.neucom.2020.05.126 
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