Simmons, Kristina, Jason Prentice, Gasper Tkadik, Jan Homann, Heather Yee, Stephanie Palmer, Philip Nelson, and Vijay Balasubramanian. “Data from: Transformation of Stimulus Correlations by the Retina.”https://doi.org/10.5061/dryad.246qg__Dryad, 2014.https://doi.org/10.5061/dryad.246qg .

Tkadik, Gasper, Olivier Marre, Dario Amodei, Elad Schneidman, William Bialek, and Michael Berry. “Searching for Collective Behavior in a Large Network of Sensory Neurons.”https://doi.org/10.1371/journal.pcbi.1003408__PLoS Computational Biology. Public Library of Science, 2014.https://doi.org/10.1371/journal.pcbi.1003408 .

Valderrama, Mario, Vicente Botella Soler, and Michel Le Van Quyen. “Neuronal Oscillations Scale up and Scale down the Brain Dynamics .”https://doi.org/10.1002/9783527671632.ch08__In Multiscale Analysis and Nonlinear Dynamics: From Genes to the Brain, edited by Misha Meyer and Z. Pesenson. Wiley-VCH, 2013.https://doi.org/10.1002/9783527671632.ch08 .

Rajan, Kanaka, Olivier Marre, and Gasper Tkadik. “Learning Quadratic Receptive Fields from Neural Responses to Natural Stimuli.”https://doi.org/10.1162/NECO_a_00463__Neural Computation. MIT Press , 2013.https://doi.org/10.1162/NECO_a_00463 .

Tkadik, Gasper, Olivier Marre, Thierry Mora, Dario Amodei, Michael Berry, and William Bialek. “The Simplest Maximum Entropy Model for Collective Behavior in a Neural Network.”https://doi.org/10.1088/1742-5468/2013/03/P03011__Journal of Statistical Mechanics Theory and Experiment. IOP Publishing Ltd., 2013.https://doi.org/10.1088/1742-5468/2013/03/P03011 .

Berry, Michael, Gasper Tkadik, Julien Dubuis, Olivier Marre, and Ravá Da Silveira. “A Simple Method for Estimating the Entropy of Neural Activity.”https://doi.org/10.1088/1742-5468/2013/03/P03015__Journal of Statistical Mechanics Theory and Experiment. IOP Publishing Ltd., 2013.https://doi.org/10.1088/1742-5468/2013/03/P03015 .

Granot Atedgi, Einat, Gasper Tkadik, Ronen Segev, and Elad Schneidman. “Stimulus-Dependent Maximum Entropy Models of Neural Population Codes.”https://doi.org/10.1371/journal.pcbi.1002922__PLoS Computational Biology. Public Library of Science, 2013.https://doi.org/10.1371/journal.pcbi.1002922 .

Botella Soler, Vicente, José Oteo, Javier Ros, and Paul Glendinning. “Lyapunov Exponent and Topological Entropy Plateaus in Piecewise Linear Maps.”https://doi.org/10.1088/1751-8113/46/12/125101__Journal of Physics A: Mathematical and Theoretical. IOP Publishing Ltd., 2013.https://doi.org/10.1088/1751-8113/46/12/125101 .

Tkadik, Gasper, Einat Granot Atedgi, Ronen Segev, and Elad Schneidman. “Retinal Metric: A Stimulus Distance Measure Derived from Population Neural Responses.”https://doi.org/10.1103/PhysRevLett.110.058104__Physical Review Letters. American Physical Society, 2013.https://doi.org/10.1103/PhysRevLett.110.058104 .

Dubuis, Julien, Gasper Tkadik, Eric Wieschaus, Thomas Gregor, and William Bialek. “Positional Information, in Bits.”https://doi.org/10.1073/pnas.1315642110__PNAS. National Academy of Sciences, 2013.https://doi.org/10.1073/pnas.1315642110 .

Wakamoto, Yurichi, Neraaj Dhar, Remy P Chait, Katrin Schneider, François Signorino Gelo, Stanislas Leibler, and John Mckinney. “Dynamic Persistence of Antibiotic-Stressed Mycobacteria.”https://doi.org/10.1126/science.1229858__Science. American Association for the Advancement of Science, 2013.https://doi.org/10.1126/science.1229858 .

Simmons, Kristina, Jason Prentice, Gasper Tkadik, Jan Homann, Heather Yee, Stephanie Palmer, Philip Nelson, and Vijay Balasubramanian. “Transformation of Stimulus Correlations by the Retina.”https://doi.org/10.1371/journal.pcbi.1003344__PLoS Computational Biology. Public Library of Science, 2013.https://doi.org/10.1371/journal.pcbi.1003344 .

Stephens, Greg, Thierry Mora, Gasper Tkadik, and William Bialek. “Statistical Thermodynamics of Natural Images.”https://doi.org/10.1103/PhysRevLett.110.018701__Physical Review Letters. American Physical Society, 2013.https://doi.org/10.1103/PhysRevLett.110.018701 .

Tkadik, Gasper, Aleksandra Walczak, and William Bialek. “Optimizing Information Flow in Small Genetic Networks. III. A Self-Interacting Gene.”https://doi.org/10.1103/PhysRevE.85.041903__https://doi.org/10.1103/PhysRevE.85.041903__Physical Review E Statistical Nonlinear and Soft Matter Physics . American Institute of Physics, 2012.https://doi.org/10.1103/PhysRevE.85.041903 .

Rieckh, Georg, Wolfgang Kreuzer, Holger Waubke, and Peter Balazs. “A 2.5D-Fourier-BEM Model for Vibrations in a Tunnel Running through Layered Anisotropic Soil.”https://doi.org/10.1016/j.enganabound.2011.12.014__https://doi.org/10.1016/j.enganabound.2011.12.014__Engineering Analysis with Boundary Elements. Elsevier, 2012.https://doi.org/10.1016/j.enganabound.2011.12.014 .

Tkadik, Gasper, and Aleksandra Walczak. “Information Transmission in Genetic Regulatory Networks a Review.”https://doi.org/10.1088/0953-8984/23/15/153102__Journal of Physics: Condensed Matter. IOP Publishing Ltd., 2011.https://doi.org/10.1088/0953-8984/23/15/153102 .

Tkadik, Gasper, Patrick Garrigan, Charles Ratliff, Grega Milcinski, Jennifer Klein, Lucia Seyfarth, Peter Sterling, David Brainard, and Vijay Balasubramanian. “Natural Images from the Birthplace of the Human Eye.”https://doi.org/10.1371/journal.pone.0020409__PLoS One. Public Library of Science, 2011.https://doi.org/10.1371/journal.pone.0020409 .