Mechanisms of radial glia progenitor cell lineage progression
R.J. Beattie, S. Hippenmeyer, FEBS Letters 591 (2017) 3993–4008.

Multi-electrode array recording from salamander retinal ganglion cells
O. Marre, G. Tkadik, D. Amodei, E. Schneidman, W. Bialek, M. Berry, (2017).

Graph matching problems for annotating C. Elegans
D. Kainmueller, F. Jug, C. Rother, G. Meyers, (2017).

MATLAB analysis code for 'Sequence-Specific Thermodynamic Properties of Nucleic Acids Influence Both Transcriptional Pausing and Backtracking in Yeast'
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Brittle fracture simulation with boundary elements for computer graphics
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The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W
C. Fraisse, M.A.L. Picard, B. Vicoso, Nature Communications 8 (2017).

Fastq files for "Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection"
M. Steinrück, C.C. Guet, (2017).

Source codes: Brittle fracture simulation with boundary elements for computer graphics
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Supplementary Files for "The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W"
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Forward migration indexes
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Immunological synapse DC-Tcells
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Biased partitioning of the multi-drug efflux pump AcrAB-TolC underlies long-lived phenotypic heterogeneity
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Biased partitioning of the multidrug efflux pump AcrAB TolC underlies long lived phenotypic heterogeneity
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Data for "The genomic characterization of the t-haplotype, a mouse meiotic driver, highlights its complex history and specialized biology"
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Strong amplifiers of natural selection
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Code for "The genomic characterization of the t-haplotype, a mouse meiotic driver, highlights its complex history and specialized biology"
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Live tracking of moving samples in confocal microscopy for vertically grown roots
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Light sheet fluorescence microscopy of plant roots growing on the surface of a gel
D. von Wangenheim, R. Hauschild, J. Friml, Journal of Visualized Experiments JoVE 2017 (2017).

Light Sheet Fluorescence microscopy of plant roots growing on the surface of a gel
D. von Wangenheim, R. Hauschild, J. Friml, (2017).

Live tracking of moving samples in confocal microscopy for vertically grown roots
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Bounding helly numbers via betti numbers
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Transient behavior between multi-cell flow states in ferrofluidic Taylor-Couette flow
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Strongly aligned molecules inside helium droplets in the near-adiabatic regime
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A lower bound for the BCS functional with boundary conditions at infinity
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Sequence-specific thermodynamic properties of nucleic acids influence both transcriptional pausing and backtracking in yeast
M. Lukacisin, M. Landon, R. Jajoo, PLoS One 12 (2017).

The dynamic cytokine niche
F.P. Assen, M.K. Sixt, Immunity 46 (2017) 519–520.

PirB regulates asymmetries in hippocampal circuitry
H. Ukai, A. Kawahara, K. Hirayama, M.J. Case, S. Aino, M. Miyabe, K. Wakita, R. Oogi, M. Kasayuki, S. Kawashima, S. Sugimoto, K. Chikamatsu, N. Nitta, T. Koga, R. Shigemoto, T. Takai, I. Ito, PLoS One 12 (2017).

Green-light-induced inactivation of receptor signaling using cobalamin-binding domains
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Methodological advances in auxin and cytokinin biology
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The RNA-binding protein tristetraprolin schedules apoptosis of pathogen-engaged neutrophils during bacterial infection
F. Ebner, V. Sedlyarov, S. Tasciyan, M. Ivin, F. Kratochvill, N. Gratz, L. Kenner, A. Villunger, M.K. Sixt, P. Kovarik, The Journal of Clinical Investigation 127 (2017) 2051–2065.

Interstitial fluid osmolarity modulates the action of differential tissue surface tension in progenitor cell segregation during gastrulation
G. Krens, J. Veldhuis, V. Barone, D. Capek, J.-L. Maître, W. Brodland, C.-P.J. Heisenberg, Development 144 (2017) 1798–1806.

Complex chromosomal neighborhood effects determine the adaptive potential of a gene under selection
M. Steinrück, C.C. Guet, ELife 6 (2017).

Stress induced mutagenesis: Stress diversity facilitates the persistence of mutator genes
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Toward a quantitative understanding of antibiotic resistance evolution
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Non-polynomial worst case analysis of recursive programs
K. Chatterjee, H. Fu, A.K. Goharshady, in:, R. Majumdar, V. Kundak (Eds.), Springer, 2017, pp. 41–63.

JTDec: A tool for tree decompositions in soot
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Friction forces position the neural anlage
M. Smutny, Z. Ákos, S. Grigolon, S. Shamipour, V. Ruprecht, D. Capek, M. Behrndt, E. Papusheva, M. Tada, B. Hof, T. Vicsek, G. Salbreux, C.-P.J. Heisenberg, Nature Cell Biology 19 (2017) 306–317.

An effective feedback loop between cell-cell contact duration and morphogen signaling determines cell fate
V. Barone, M. Lang, G. Krens, S. Pradhan, S. Shamipour, K. Sako, M.K. Sikora, C.C. Guet, C.-P.J. Heisenberg, Developmental Cell 43 (2017) 198–211.

Cell polarity in cerebral cortex development - cellular architecture shaped by biochemical networks
A.H. Hansen, C.F. Düllberg, C. Mieck, M. Loose, S. Hippenmeyer, Frontiers in Cellular Neuroscience 11 (2017).

An orthogonal permease–inducer–repressor feedback loop shows bistability
R. Gnügge, L. Dharmarajan, M. Lang, J. Stelling, ACS Synthetic Biology 5 (2016) 1098–1107.

Conditionally optimal algorithms for generalized Büchi Games
K. Chatterjee, W. Dvorák, M.H. Henzinger, V. Loitzenbauer, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.

On the skolem problem for continuous linear dynamical systems
V.K. Chonev, J. Ouaknine, J. Worrell, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik, 2016.

Computation tree logic for synchronization properties
K. Chatterjee, L. Doyen, in:, Schloss Dagstuhl- Leibniz-Zentrum fur Informatik, 2016.

Cellular mechanisms for cargo delivery and polarity maintenance at different polar domains in plant cells
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SCP-ECG .0: An enhanced standard communication protocol for computer-assisted electrocardiography
P. Rubel, D. Pani, A. Schlögl, J. Fayn, F. Badilini, P. Macfarlane, A. Varri, in:, 2016 Computing in Cardiology Conference, Computing in Cardiology, 2016, pp. 309–312.

Relevant sparse codes with variational information bottleneck
M.J. Chalk, O. Marre, G. Tkadik, in:, Neural Information Processing Systems, 2016, pp. 1965–1973.

KCT auxiliary proteins modulate kinetics of GABAB receptor-mediated inhibition in Cholecystokinin-containing interneurons
S. Booker, D. Althof, A. Gross, D. Loreth, J. Müller, A. Unger, B. Fakler, A. Varro, M. Watanabe, M. Gassmann, B. Bettler, R. Shigemoto, I. Vida, Á. Kulik, Cerebral Cortex 27 (2016) 2318–2334.

Nested weighted limit-average automata of bounded width
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.

Local linearizability for concurrent container-type data structures
A. Haas, T.A. Henzinger, A. Holzer, C. Kirsch, M. Lippautz, H. Payer, A. Sezgin, A. Sokolova, H. Veith, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2016.

Computational multicopter design
T. Du, A. Schulz, B. Zhu, B. Bickel, W. Matusik, in:, ACM, 2016.

Lifelong learning with weighted majority votes
A. Pentina, R. Urner, in:, Neural Information Processing Systems, 2016, pp. 3619–3627.

FlexMolds: Automatic design of flexible shells for molding
L. Malomo, N. Pietroni, B. Bickel, P. Cignoni, in:, ACM, 2016.

Improving weakly-supervised object localization by micro-annotation
A. Kolesnikov, C. Lampert, in:, Proceedings of the British Machine Vision Conference 2016, BMVA Press, 2016, p. 92.1-92.12.

Parallel reachability analysis for hybrid systems
A. Gurung, A. Deka, E. Bartocci, S. Bogomolov, R. Grosu, R. Ray, in:, IEEE, 2016.

Estimating nonlinear neural response functions using GP priors and Kronecker methods
C. Savin, G. Tkadik, in:, Neural Information Processing Systems, 2016, pp. 3610–3618.

Efficient single sideband microwave to optical conversion using a LiNbO WGM-resonator
A. Rueda, F. Sedlmeir, M. Collodo, U. Vogl, B. Stiller, G. Schunk, D. Strekalov, C. Marquardt, J.M. Fink, O. Painter, G. Leuchs, H. Schwefel, in:, IEEE, 2016.

Synthesizing time triggered schedules for switched networks with faulty links
G. Avni, S. Guha, G. Rodríguez Navas, in:, Proceedings of the 13th International Conference on Embedded Software , ACM, 2016.

Tutorial: Software tools for hybrid systems verification transformation and synthesis  HyST and TuLiP
P. Duggirala, C. Fan, M. Potok, B. Qi, S. Mitra, M. Viswanathan, S. Bak, S. Bogomolov, T. Johnson, L. Nguyen, C. Schilling, A. Sogokon, H. Tran, W. Xiang, in:, 2016 IEEE Conference on Control Applications, IEEE, 2016.

Space-time sculpting of liquid animation
P. Manteaux, U. Vimont, C. Wojtan, D. Rohmer, M. Cani, in:, Proceedings of the 9th International Conference on Motion in Games , ACM, 2016.

RASGR deficiency causes immunodeficiency with impaired cytoskeletal dynamics
E. Salzer, D. Ça7daf, M. Hons, E. Mace, W. Garncarz, O. Petronczki, R. Platzer, L. Pfajfer, I. Bilic, S. Ban, K. Willmann, M. Mukherjee, V. Supper, H. Hsu, P. Banerjee, P. Sinha, F. Mcclanahan, G. Zlabinger, W. Pickl, J. Gribben, H. Stockinger, K. Bennett, J. Huppa, L. Dupré, Ö. Sanal, U. Jäger, M.K. Sixt, I. Tezcan, J. Orange, K. Boztug, Nature Immunology 17 (2016) 1352–1360.

Quantitative automata under probabilistic semantics
K. Chatterjee, T.A. Henzinger, J. Otop, in:, Proceedings of the 31st Annual ACM/IEEE Symposium, IEEE, 2016, pp. 76–85.

Model and objective separation with conditional lower bounds: disjunction is harder than conjunction
K. Chatterjee, W. Dvoák, M.H. Henzinger, V. Loitzenbauer, in:, Proceedings of the 31st Annual ACM/IEEE Symposium on Logic in Computer Science, IEEE, 2016, pp. 197–206.

Heme drives hemolysis-induced susceptibility to infection via disruption of phagocyte functions
R. Martins, J. Maier, A. Gorki, K. Huber, O. Sharif, P. Starkl, S. Saluzzo, F. Quattrone, R. Gawish, K. Lakovits, M. Aichinger, B. Radic Sarikas, C. Lardeau, A. Hladik, A. Korosec, M. Brown, K. Vaahtomeri, M. Duggan, D. Kerjaschki, H. Esterbauer, J. Colinge, S. Eisenbarth, T. Decker, K. Bennett, S. Kubicek, M.K. Sixt, G. Superti Furga, S. Knapp, Nature Immunology 17 (2016) 1361–1372.

Hierarchic genetic strategy with maturing as a generic tool for multiobjective optimization
R. azarz, M. Idzik, K. Gdek, E.P. Gajda-Zagorska, Journal of Computational Science 17 (2016) 249–260.

Ground states of large bosonic systems: The gross Pitaevskii limit revisited
P. Nam, N. Rougerie, R. Seiringer, Analysis and PDE 9 (2016) 459–485.

Enquiry into the topology of plasma membrane localized PIN auxin transport components
T. Nodzyski, S. Vanneste, M. Zwiewka, M. Pernisová, J. Hejátko, J. Friml, Molecular Plant 9 (2016) 1504–1519.

Auxin flow mediated competition between axillary buds to restore apical dominance
J. Balla, Z. Medved’Ová, P. Kalousek, N. Matijesduková, J. Friml, V. Reinöhl, S. Procházka, Scientific Reports 6 (2016).

A study of rigorous ODE integrators for multi scale set oriented computations
T. Miyaji, P. Pilarczyk, M. Gameiro, H. Kokubu, K. Mischaikow, Applied Numerical Mathematics 107 (2016) 34–47.

A Radical Break Restraining Neutrophil Migration
J. Renkawitz, M.K. Sixt, Developmental Cell 38 (2016) 448–450.

A noncanonical auxin sensing mechanism is required for organ morphogenesis in arabidopsis
S. Simonini, J. Deb, L. Moubayidin, P. Stephenson, M. Valluru, A. Freire Rios, K. Sorefan, D. Weijers, J. Friml, L. Östergaard, Genes and Development 30 (2016) 2286–2296.

A model of differential growth guided apical hook formation in plants
P. dádníková, K.T. Wabnik, A. Abuzeineh, M. Gallemí, D. Van Der Straeten, R. Smith, D. Inze, J. Friml, P. Prusinkiewicz, E. Benková, Plant Cell 28 (2016) 2464–2477.

A microfluidic device for measuring cell migration towards substrate bound and soluble chemokine gradients
J. Schwarz, V. Bierbaum, J. Merrin, T. Frank, R. Hauschild, M.T. Bollenbach, S. Tay, M.K. Sixt, M. Mehling, Scientific Reports 6 (2016).

Tracy-widom distribution for the largest eigenvalue of real sample covariance matrices with general population
J. Lee, K. Schnelli, Annals of Applied Probability 26 (2016) 3786–3839.

Modular parameter identification of biomolecular networks
M. Lang, J. Stelling, SIAM Journal on Scientific Computing 38 (2016) 8–08.

Understanding regulatory networks requires more than computing a multitude of graph statistics: Comment on &quot;Drivers of structural features in gene regulatory networks: From biophysical constraints to biological function&quot; by O. C. Martin et al.
G. Tkadik, Physics of Life Reviews 17 (2016) 166–167.

Nonequilibrium description of de novo biogenesis and transport through Golgi-like cisternae
H. Sachdeva, M. Barma, M. Rao, Scientific Reports 6 (2016).

A closer look at multiple-forking: Leveraging (in)dependence for a tighter bound
C. Kamath Hosdurg, S. Chatterjee, Algorithmica 74 (2016) 1321–1362.

Pseudoentropy: Lower-bounds for chain rules and transformations
K.Z. Pietrzak, S. Maciej, in:, Springer, 2016, pp. 183–203.

Neural stem cells to cerebral cortex: Emerging mechanisms regulating progenitor behavior and productivity
N. Dwyer, B. Chen, S. Chou, S. Hippenmeyer, L. Nguyen, T. Ghashghaei, Journal of Neuroscience 36 (2016) 11394–11401.

Robust draws in balanced knockout tournaments
K. Chatterjee, R. Ibsen-Jensen, J. Tkadlec, in:, AAAI Press, 2016, pp. 172–179.

Mating and longevity in ant males
S. Metzler, J. Heinze, A. Schrempf, Ecology and Evolution 6 (2016) 8903–8906.

Cytokinin response factors integrate auxin and cytokinin pathways for female reproductive organ development
M. Cucinotta, S. Manrique, A. Guazzotti, N. Quadrelli, M. Mendes, E. Benková, L. Colombo, Development 143 (2016) 4419–4424.

Modular architecture and unique teichoic acid recognition features of choline-binding protein L CbpL contributing to pneumococcal pathogenesis
J. Gutierrez-Fernandez, M. Saleh, M. Alcorlo, A. Gómez Mejóa, D. Pantoja Uceda, M. Treviño, F. Vob, M. Abdullah, S. Galán Bartual, J. Seinen, P. Sánchez Murcia, F. Gago, M. Bruix, S. Hammerschmidt, J. Hermoso, Scientific Reports 6 (2016).

Asymptotic analysis of noisy fitness maximization, applied to metabolism &amp; growth
D. De Martino, D. Masoero,  Journal of Statistical Mechanics: Theory and Experiment 2016 (2016).

Reconstruction of haplotype-blocks selected during experimental evolution.
S. Franssen, N.H. Barton, C. Schlötterer, Molecular Biology and Evolution 34 (2016) 174–184.

Only the combination of mathematics and agent based simulations can leverage the full potential of evolutionary modeling: Comment on cEvolutionary game theory using agent-based methodsd by C. Adami, J. Schossau and A. Hintze
C. Hilbe, A. Traulsen, Physics of Life Reviews 19 (2016) 29–31.

Formin’ a nuclear protection
J. Renkawitz, M.K. Sixt, Cell 167 (2016) 1448–1449.

Immune priming in arthropods: an update focusing on the red flour beetle
B. Milutinovic, R. Peuß, K. Ferro, J. Kurtz, Zoology  119 (2016) 254–261.

Comparative genomic analysis of Haemophilus haemolyticus and nontypeable Haemophilus influenzae and a new testing scheme for their discrimination
F. Hu, L. Rishishwar, A. Sivadas, G. Mitchell, J. King, T. Murphy, J. Gilsdorf, L. Mayer, X. Wang, Journal of Clinical Microbiology 54 (2016) 3010–3017.

Surprises in numerical expressions of physical constants
A. Amir, M. Lemeshko, T. Tokieda, American Mathematical Monthly 123 (2016) 609–612.

Libration of strongly oriented polar molecules inside a superfluid
E. Redchenko, M. Lemeshko, ChemPhysChem 17 (2016) 3649–3654.

Purification of ovine respiratory complex i results in a highly active and stable preparation
J.A. Letts, G. Degliesposti, K. Fiedorczuk, M. Skehel, L.A. Sazanov, Journal of Biological Chemistry 291 (2016) 24657–24675.

Real time analysis of the apical hook development
Q. Zhu, P. dádníková, D. Smet, D. Van Der Straeten, E. Benková, in:, Plant Hormones, Humana Press, 2016, pp. 1–8.

Termination of shoot gravitropic responses by auxin feedback on PIN3 polarity
H. Rakusová, M. Abbas, H. Han, S. Song, H. Robert, J. Friml, Current Biology 26 (2016) 3026–3032.

Compliant control for soft robots: Emergent behavior of a tendon driven anthropomorphic arm
G.S. Martius, R. Hostettler, A. Knoll, R. Der, in:, IEEE, 2016.

Acceleration feature points of unsteady shear flows
J. Kasten, J. Reininghaus, I. Hotz, H. Hege, B. Noack, G. Daviller, M. Morzyski, Archives of Mechanics 68 (2016) 55–80.

Efficient T-cell priming and activation requires signaling through prostaglandin  (EP) receptors
V. Sreeramkumar, M. Hons, C. Punzón, J. Stein, D. Sancho, M. Fresno Forcelledo, N. Cuesta, Immunology and Cell Biology 94 (2016) 39–51.

Culturing synechocystis sp. Strain pcc 6803 with N2 and CO2 in a diel regime reveals multiphase glycogen dynamics with low maintenance costs
A. Angermayr, P. Van Alphen, D. Hasdemir, G. Kramer, M. Iqbal, W. Van Grondelle, H. Hoefsloot, Y. Choi, K. Hellingwerf, Applied and Environmental Microbiology 82 (2016) 4180–4189.

Bulk universality for deformed wigner matrices
J. Lee, K. Schnelli, B. Stetler, H. Yau, Annals of Probability 44 (2016) 2349–2425.

Fuselage boundary layer ingestion propulsion applied to a thin haul commuter aircraft for optimal efficiency
G. Miki, A. Stoll, J. Bevirt, R. Grah, M. Moore, in:, AIAA, 2016, pp. 1–19.