Guerraoui R, Henzinger TA, Kapalka M, Singh V. Transactions in the jungle. In: ACM; 2010:263-272. doi:10.1145/1810479.1810529

Henzinger TA, Tomar A, Singh V, Wies T, Zufferey D. A marketplace for cloud resources. In: ACM; 2010:1-8. doi:10.1145/1879021.1879022

Doyen L, Henzinger TA, Legay A, Nickovic D. Robustness of sequential circuits. In: IEEE; 2010:77-84. doi:10.1109/ACSD.2010.26

Cerny P, Henzinger TA, Radhakrishna A. Quantitative Simulation Games. In: Manna Z, Peled D, eds. Time For Verification: Essays in Memory of Amir Pnueli. Vol 6200. Essays in Memory of Amir Pnueli. Springer; 2010:42-60. doi:10.1007/978-3-642-13754-9_3

Beyer D, Henzinger TA, Théoduloz G, Zufferey D. Shape refinement through explicit heap analysis. In: Rosenblum D, Taenzer G, eds. Vol 6013. Springer; 2010:263-277. doi:10.1007/978-3-642-12029-9_19

Chatterjee K, Doyen L, Henzinger TA. Expressiveness and closure properties for quantitative languages. Logical Methods in Computer Science. 2010;6(3):1-23. doi:10.2168/LMCS-6(3:10)2010

Barton NH, Kelleher J, Etheridge A. A new model for extinction and recolonization in two dimensions: Quantifying phylogeography. Evolution. 2010;64(9):2701-2715. doi:10.1111/j.1558-5646.2010.01019.x

Alur R, Cerny P. Expressiveness of streaming string transducers. In: Vol 8. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:1-12. doi:10.4230/LIPIcs.FSTTCS.2010.1

Cristau J, David C, Horn F. How do we remember the past in randomised strategies? . In: Proceedings of GandALF 2010. Vol 25. Open Publishing Association; 2010:30-39. doi:10.4204/EPTCS.25.7

Hoenicke J, Leino K, Podelski A, Schäf M, Wies T. Doomed program points. Formal Methods in System Design. 2010;37(2-3):171-199. doi:10.1007/s10703-010-0102-0

Cerny P, Henzinger TA, Radhakrishna A. Simulation distances. In: Vol 6269. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2010:235-268. doi:10.1007/978-3-642-15375-4_18

Chatterjee K, Cerny P, Henzinger TA, Radhakrishna A, Singh R. Quantitative Synthesis for Concurrent Programs. IST Austria; 2010. doi:10.15479/AT:IST-2010-0004

Cerny P, Henzinger TA, Radhakrishna A. Simulation Distances. IST Austria; 2010. doi:10.15479/AT:IST-2010-0003

Cerny P, Radhakrishna A, Zufferey D, Chaudhuri S, Alur R. Model checking of linearizability of concurrent list implementations. In: Vol 6174. Springer; 2010:465-479. doi:10.1007/978-3-642-14295-6_41

Chatterjee K, Henzinger TA, Jobstmann B, Radhakrishna A. GIST: A solver for probabilistic games. In: Vol 6174. Springer; 2010:665-669. doi:10.1007/978-3-642-14295-6_57

Cerny P, Radhakrishna A, Zufferey D, Chaudhuri S, Alur R. Model Checking of Linearizability of Concurrent List Implementations. IST Austria; 2010. doi:10.15479/AT:IST-2010-0001

Chatterjee K, Fijalkow N. Topological, Automata-Theoretic and Logical Characterization of Finitary Languages. IST Austria; 2010. doi:10.15479/AT:IST-2010-0002

Chatterjee K, Henzinger TA. Probabilistic Automata on infinite words: decidability and undecidability results. In: Vol 6252. Springer; 2010:1-16. doi:10.1007/978-3-642-15643-4_1

Chatterjee K, Doyen L, Henzinger TA. Qualitative analysis of partially-observable Markov Decision Processes. In: Vol 6281. Springer; 2010:258-269. doi:10.1007/978-3-642-15155-2_24

Zemach A, Kim MY, Silva P, et al. Local DNA hypomethylation activates genes in rice endosperm. Proceedings of the National Academy of Sciences. 2010;107(43):18729-18734. doi:10.1073/pnas.1009695107

Zemach A, Zilberman D. Evolution of eukaryotic DNA methylation and the pursuit of safer sex. Current Biology. 2010;20(17):0-5. doi:10.1016/j.cub.2010.07.007

Zemach A, McDaniel IE, Silva P, Zilberman D. Genome-wide evolutionary analysis of eukaryotic DNA methylation. Science. 2010;328(5980):916-919. doi:10.1126/science.1186366

Rosas U, Barton NH, Copsey L, Barbier De Reuille P, Coen E. Cryptic variation between species and the basis of hybrid performance. PLoS Biology. 2010;8(7). doi:10.1371/journal.pbio.1000429

Rosas U, Barton NH, Copsey L, Barbier De Reuille P, Coen E. Heterosis and the drift load. 2010. doi:10.1371/journal.pbio.1000429.s003

Feng X, Dickinson HG. Tapetal cell fate, lineage and proliferation in the Arabidopsis anther. Development. 2010;137(14):2409-2416. doi:10.1242/dev.049320

Feng X, Dickinson HG. Cell–cell interactions during patterning of the Arabidopsis anther. Biochemical Society Transactions. 2010;38(2):571-576. doi:10.1042/bst0380571

Chatterjee K, Majumdar R. Discounting in games across time scales. In: Vol 25. EPTCS; 2010:22-29. doi:10.4204/EPTCS.25.6

Pflicke H.   Dendritic cell migration across basement membranes in the skin. 2010.

Wies T, Zufferey D, Henzinger TA. Forward analysis of depth-bounded processes. In: Ong L, ed. Vol 6014. Springer; 2010:94-108. doi:10.1007/978-3-642-12032-9_8

Palero F, Abello P, Macpherson E, Matthee C, Pascual M. Genetic diversity levels in fishery-exploited spiny lobsters of the Genus Palinurus (Decapoda: Achelata). Journal of Crustacean Biology. 2010;30(4):658-663. doi:10.1651/09-3192.1

Schlögl A, Vidaurre C, Müller K-R. Adaptive Methods in BCI Research - An Introductory Tutorial. In: Graimann B, Pfurtscheller G, Allison B, eds. Brain-Computer Interfaces. 1st ed. FRONTCOLL. Berlin, Heidelberg: Springer; 2010:331-355. doi:10.1007/978-3-642-02091-9_18

Davison A, Barton NH, Clarke B. The effect of chirality phenotype and genotype on the fecundity and viability of Partula suturalis and Lymnaea stagnalis: Implications for the evolution of sinistral snails. Journal of Evolutionary Biology. 2009;22(8):1624-1635. doi:10.1111/j.1420-9101.2009.01770.x

Didier F, Henzinger TA, Mateescu M, Wolf V. Fast adaptive uniformization of the chemical master equation. In: Vol 4. IEEE; 2009:118-127. doi:10.1109/HiBi.2009.23

Henzinger TA, Jobstmann B, Wolf V. Formalisms for specifying Markovian population models. In: Vol 5797. Springer; 2009:3-23. doi:10.1007/978-3-642-04420-5_2

Henzinger TA, Kirsch C, Marques E, Sokolova A. Distributed, modular HTL. In: IEEE; 2009:171-180. doi:10.1109/RTSS.2009.9

Chatterjee K, Doyen L, Henzinger TA. Probabilistic weighted automata. In: Vol 5710. Springer; 2009:244-258. doi:10.1007/978-3-642-04081-8_17

Chatterjee K, Henzinger TA, Horn F. Finitary winning in omega-regular games. ACM Transactions on Computational Logic (TOCL). 2009;11(1). doi:10.1145/1614431.1614432

Polechova J, Barton NH, Marion G. Species’ range: Adaptation in space and time. American Naturalist. 2009;174(5):6-4. doi:10.1086/605958

Barton NH, De Cara M. The evolution of strong reproductive isolation. Evolution; International Journal of Organic Evolution. 2009;63(5):1171-1190. doi:10.1111/j.1558-5646.2009.00622.x

Barton NH. Why sex and recombination? . In: Cold Spring Harbor Symposia on Quantitative Biology. Vol 74. Cold Spring Harbor Laboratory Press; 2009:187-195. doi:10.1101/sqb.2009.74.030

Barton NH, Coe J. On the application of statistical physics to evolutionary biology. Journal of Theoretical Biology. 2009;259(2):317-324. doi:10.1016/j.jtbi.2009.03.019

Tripakis S, Lickly B, Henzinger TA, Lee E. On relational interfaces. In: EMSOFT ’09 Proceedings of the Seventh ACM International Conference on Embedded Software. ACM; 2009:67-76. doi:10.1145/1629335.1629346

Edelsbrunner H, Harer J. The persistent Morse complex segmentation of a 3-manifold. In: Vol 5903. Springer; 2009:36-50. doi:10.1007/978-3-642-10470-1_4

Barton NH, De Vladar H. Statistical mechanics and the evolution of polygenic quantitative traits. Genetics. 2009;181(3):997-1011. doi:10.1534/genetics.108.099309

Chatterjee K, Doyen L, Henzinger TA. Alternating weighted automata. In: Vol 5699. Springer; 2009:3-13. doi:10.1007/978-3-642-03409-1_2

Chatterjee K, Doyen L, Henzinger TA. A survey of stochastic games with limsup and liminf objectives. In: Vol 5556. Springer; 2009:1-15. doi:10.1007/978-3-642-02930-1_1

Chatterjee K, Henzinger TA, Horn F. Stochastic games with finitary objectives. In: Vol 5734. Springer; 2009:34-54. doi:10.1007/978-3-642-03816-7_4

Bloem R, Chatterjee K, Henzinger TA, Jobstmann B. Better quality in synthesis through quantitative objectives. In: Vol 5643. Springer; 2009:140-156. doi:10.1007/978-3-642-02658-4_14

Chatterjee K, Henzinger TA, Jobstmann B, Radhakrishna A. Gist: A Solver for Probabilistic Games. IST Austria; 2009. doi:10.15479/AT:IST-2009-0003

Chatterjee K, Henzinger TA, Horn F. Improved Lower Bounds for Request-Response and Finitary Streett Games. IST Austria; 2009. doi:10.15479/AT:IST-2009-0002

Chatterjee K. Probabilistic Automata on Infinite Words: Decidability and Undecidability Results. IST Austria; 2009. doi:10.15479/AT:IST-2009-0004

Chatterjee K, Doyen L, Henzinger TA. Qualitative Analysis of Partially-Observable Markov Decision Processes. IST Austria; 2009. doi:10.15479/AT:IST-2009-0001

Hsieh T-F, Ibarra CA, Silva P, et al. Genome-wide demethylation of Arabidopsis endosperm. Science. 2009;324(5933):1451-1454. doi:10.1126/science.1172417

Zilberman D. The evolving functions of DNA methylation. Current Opinion in Plant Biology. 2008;11(5):554-559. doi:10.1016/j.pbi.2008.07.004

Zilberman D, Coleman-Derr D, Ballinger T, Henikoff S. Histone A.Z and DNA methylation are mutually antagonistic chromatin marks. Nature. 2008;456(7218):125-129. doi:10.1038/nature07324

Barton NH. Identity and coalescence in structured populations: A commentary on “Inbreeding coefficients and coalescence times”10.1017/S0016672308009683__by Montgomery Slatkin. Genetics Research. 2008;89(5-6):475-477. doi:10.1017/S0016672308009683

Penterman J, Zilberman D, Huh JH, Ballinger T, Henikoff S, Fischer RL. DNA demethylation in the Arabidopsis genome. Proceedings of the National Academy of Sciences. 2007;104(16):6752-6757. doi:10.1073/pnas.0701861104

Zilberman D. The Human Promoter Methylome. Vol 39. Nature Publishing Group; 2007:442-443. doi:10.1038/ng0407-442

Zilberman D, Henikoff S. Genome-wide analysis of DNA methylation patterns. Development. 2007;134(22):3959-3965. doi:10.1242/dev.001131

Feng X, Dickinson HG. Packaging the male germline in plants. Trends in Genetics. 2007;23(10):503-510. doi:10.1016/j.tig.2007.08.005

Zilberman D, Gehring M, Tran RK, Ballinger T, Henikoff S. Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nature Genetics. 2006;39(1):61-69. doi:10.1038/ng1929

Tran RK, Henikoff JG, Zilberman D, Ditt RF, Jacobsen SE, Henikoff S. DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes. Current Biology. 2005;15(2):154-159. doi:10.1016/j.cub.2005.01.008

Tran RK, Zilberman D, de Bustos C, et al. Chromatin and siRNA pathways cooperate to maintain DNA methylation of small transposable elements in Arabidopsis. Genome Biology. 2005;6(11). doi:10.1186/gb-2005-6-11-r90

Zilberman D, Henikoff S. Epigenetic inheritance in Arabidopsis: Selective silence. Current Opinion in Genetics and Development. 2005;15(5):557-562. doi:10.1016/j.gde.2005.07.002

Zilberman D, Cao X, Johansen LK, Xie Z, Carrington JC, Jacobsen SE. Role of Arabidopsis ARGONAUT in RNA-directed DNA methylation triggered by inverted repeats. Current Biology. 2004;14(13):1214-1220. doi:10.1016/j.cub.2004.06.055

Xie Z, Johansen LK, Gustafson AM, et al. Genetic and functional diversification of small RNA pathways in plants. PLoS Biology. 2004;2(5):0642-0652. doi:10.1371/journal.pbio.0020104

Zilberman D, Henikoff S. Silencing of transposons in plant genomes: kick them when they’re down. Genome Biology. 2004;5(12). doi:10.1186/gb-2004-5-12-249

Chan SW-L, Zilberman D, Xie10.1126/science.1095989__Zhixin, Johansen10.1126/science.1095989__Lisa K., Carrington JC, Jacobsen SE. RNA silencing genes control de novo DNA methylation. Science. 2004;303(5662):1336. doi:10.1126/science.1095989

Liao Z, Chen M, Gong Y, et al. A new geranylgeranyl Diphosphate synthase gene from Ginkgo biloba, which intermediates the biosynthesis of the key precursor for ginkgolides. DNA Sequence. 2004;15(2):153-158. doi:10.1080/10425170410001667348

Cao X, Aufsatz W, Zilberman D, et al. Role of the DRM and CM methyltransferases in RNA-directed DNA methylation. Current Biology. 2003;13(24):2212-2217. doi:10.1016/j.cub.2003.11.052

Zilberman D, Cao10.1126/science.1079695__Xiaofeng, Jacobsen SE. ARGONAUT control of locus-specific siRNA accumulation and DNA and histone methylation. Science. 2003;299(5607):716-719. doi:10.1126/science.1079695

Lindroth AM, Cao X, Jackson JP, et al. Requirement of CHROMOMETHYLAS for maintenance of CpXpG methylation. Science. 2001;292(5524):2077-2080. doi:10.1126/science.1059745