[{"oa_version":"Published Version","status":"public","ddc":["570"],"_id":"12106","file_date_updated":"2023-08-16T11:30:45Z","month":"06","oa":1,"date_created":"2023-01-08T23:00:53Z","volume":41,"author":[{"full_name":"Yeung, Jake","last_name":"Yeung","orcid":"0000-0003-1732-1559","id":"123012b2-db30-11eb-b4d8-a35840c0551b","first_name":"Jake"},{"first_name":"Maria","full_name":"Florescu, Maria","last_name":"Florescu"},{"last_name":"Zeller","full_name":"Zeller, Peter","first_name":"Peter"},{"first_name":"Buys Anton","full_name":"De Barbanson, Buys Anton","last_name":"De Barbanson"},{"full_name":"Wellenstein, Max D.","last_name":"Wellenstein","first_name":"Max D."},{"last_name":"Van Oudenaarden","full_name":"Van Oudenaarden, Alexander","first_name":"Alexander"}],"intvolume":"        41","scopus_import":"1","doi":"10.1038/s41587-022-01560-3","department":[{"_id":"ScienComp"}],"has_accepted_license":"1","article_processing_charge":"No","day":"01","publisher":"Springer Nature","article_type":"original","page":"813–823","license":"https://creativecommons.org/licenses/by/4.0/","language":[{"iso":"eng"}],"year":"2023","publication_identifier":{"issn":["1087-0156"],"eissn":["1546-1696"]},"corr_author":"1","quality_controlled":"1","abstract":[{"lang":"eng","text":"Regulation of chromatin states involves the dynamic interplay between different histone modifications to control gene expression. Recent advances have enabled mapping of histone marks in single cells, but most methods are constrained to profile only one histone mark per cell. Here, we present an integrated experimental and computational framework, scChIX-seq (single-cell chromatin immunocleavage and unmixing sequencing), to map several histone marks in single cells. scChIX-seq multiplexes two histone marks together in single cells, then computationally deconvolves the signal using training data from respective histone mark profiles. This framework learns the cell-type-specific correlation structure between histone marks, and therefore does not require a priori assumptions of their genomic distributions. Using scChIX-seq, we demonstrate multimodal analysis of histone marks in single cells across a range of mark combinations. Modeling dynamics of in vitro macrophage differentiation enables integrated analysis of chromatin velocity. Overall, scChIX-seq unlocks systematic interrogation of the interplay between histone modifications in single cells."}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"external_id":{"isi":["000909067600003"],"pmid":["36593403"]},"isi":1,"date_published":"2023-06-01T00:00:00Z","date_updated":"2025-04-23T08:45:24Z","title":"scChIX-seq infers dynamic relationships between histone modifications in single cells","publication_status":"published","acknowledgement":"We thank M. van Loenhout for experimental advice on purifying cell types from the bone marrow, R. van der Linden for expertise with FACS and M. Blotenburg for help with cell typing the mouse organogenesis dataset. We thank M. Saraswat and O. Stegle for discussions on multinomial distributions. This work was supported by a European Research Council Advanced grant (ERC-AdG 742225-IntScOmics); Nederlandse Organisatie voor Wetenschappelijk Onderzoek (NWO) TOP grant (NWO CW 714.016.001) and NWO grant (OCENW.GROOT.2019.017); the Swiss National Science Foundation Early Postdoc Mobility (P2ELP3-184488 to P.Z. and P2BSP3-174991 to J.Y.); Marie Sklodowska-Curie Actions Postdoc (798573 to P.Z.) and the Human Frontier for Science Program Long-Term Fellowships (LT000209-2018-L to P.Z. and LT000097-2019-L to J.Y.). This work is part of the Oncode Institute which is financed partly by the Dutch Cancer Society.","type":"journal_article","file":[{"checksum":"668447a1c8d360b68f8aaf9e08ed644f","content_type":"application/pdf","relation":"main_file","file_size":12040976,"file_id":"14066","access_level":"open_access","creator":"dernst","date_updated":"2023-08-16T11:30:45Z","success":1,"date_created":"2023-08-16T11:30:45Z","file_name":"2023_NatureBioTech_Yeung.pdf"}],"publication":"Nature Biotechnology","pmid":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"mla":"Yeung, Jake, et al. “ScChIX-Seq Infers Dynamic Relationships between Histone Modifications in Single Cells.” <i>Nature Biotechnology</i>, vol. 41, Springer Nature, 2023, pp. 813–823, doi:<a href=\"https://doi.org/10.1038/s41587-022-01560-3\">10.1038/s41587-022-01560-3</a>.","ista":"Yeung J, Florescu M, Zeller P, De Barbanson BA, Wellenstein MD, Van Oudenaarden A. 2023. scChIX-seq infers dynamic relationships between histone modifications in single cells. Nature Biotechnology. 41, 813–823.","ieee":"J. Yeung, M. Florescu, P. Zeller, B. A. De Barbanson, M. D. Wellenstein, and A. Van Oudenaarden, “scChIX-seq infers dynamic relationships between histone modifications in single cells,” <i>Nature Biotechnology</i>, vol. 41. Springer Nature, pp. 813–823, 2023.","ama":"Yeung J, Florescu M, Zeller P, De Barbanson BA, Wellenstein MD, Van Oudenaarden A. scChIX-seq infers dynamic relationships between histone modifications in single cells. <i>Nature Biotechnology</i>. 2023;41:813–823. doi:<a href=\"https://doi.org/10.1038/s41587-022-01560-3\">10.1038/s41587-022-01560-3</a>","short":"J. Yeung, M. Florescu, P. Zeller, B.A. De Barbanson, M.D. Wellenstein, A. Van Oudenaarden, Nature Biotechnology 41 (2023) 813–823.","chicago":"Yeung, Jake, Maria Florescu, Peter Zeller, Buys Anton De Barbanson, Max D. Wellenstein, and Alexander Van Oudenaarden. “ScChIX-Seq Infers Dynamic Relationships between Histone Modifications in Single Cells.” <i>Nature Biotechnology</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s41587-022-01560-3\">https://doi.org/10.1038/s41587-022-01560-3</a>.","apa":"Yeung, J., Florescu, M., Zeller, P., De Barbanson, B. A., Wellenstein, M. D., &#38; Van Oudenaarden, A. (2023). scChIX-seq infers dynamic relationships between histone modifications in single cells. <i>Nature Biotechnology</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41587-022-01560-3\">https://doi.org/10.1038/s41587-022-01560-3</a>"}},{"quality_controlled":"1","abstract":[{"text":"The power factor of poly(3,4-ethylenedioxythiophene):poly(styrene sulfonate) (PEDOT:PSS) film can be significantly improved by optimizing the oxidation level of the film in oxidation and reduction processes. However, precise control over the oxidation and reduction effects in PEDOT:PSS remains a challenge, which greatly sacrifices both S and σ. Here, we propose a two-step post-treatment using a mixture of ethylene glycol (EG) and Arginine (Arg) and sulfuric acid (H2SO4) in sequence to engineer high-performance PEDOT:PSS thermoelectric films. The high-polarity EG dopant removes the excess non-ionized PSS and induces benzenoid-to-quinoid conformational change in the PEDOT:PSS films. In particular, basic amino acid Arg tunes the oxidation level of PEDOT:PSS and prevents the films from over-oxidation during H2SO4 post-treatment, leading to increased S. The following H2SO4 post-treatment further induces highly orientated lamellar stacking microstructures to increase σ, yielding a maximum power factor of 170.6 μW m−1 K−2 at 460 K. Moreover, a novel trigonal-shape thermoelectric device is designed and assembled by the as-prepared PEDOT:PSS films in order to harvest heat via a vertical temperature gradient. An output power density of 33 μW cm−2 is generated at a temperature difference of 40 K, showing the potential application for low-grade wearable electronic devices.","lang":"eng"}],"date_published":"2023-03-15T00:00:00Z","isi":1,"external_id":{"isi":["000911497000001"]},"date_updated":"2025-01-09T07:35:04Z","title":"Two-step post-treatment to deliver high performance thermoelectric device with vertical temperature gradient","publication_status":"published","publication_identifier":{"issn":["0169-4332"]},"publication":"Applied Surface Science","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"mla":"Zhang, Li, et al. “Two-Step Post-Treatment to Deliver High Performance Thermoelectric Device with Vertical Temperature Gradient.” <i>Applied Surface Science</i>, vol. 613, 156101, Elsevier, 2023, doi:<a href=\"https://doi.org/10.1016/j.apsusc.2022.156101\">10.1016/j.apsusc.2022.156101</a>.","ista":"Zhang L, Liu X, Wu T, Xu S, Suo G, Ye X, Hou X, Yang Y, Liu Q, Wang H. 2023. Two-step post-treatment to deliver high performance thermoelectric device with vertical temperature gradient. Applied Surface Science. 613, 156101.","ama":"Zhang L, Liu X, Wu T, et al. Two-step post-treatment to deliver high performance thermoelectric device with vertical temperature gradient. <i>Applied Surface Science</i>. 2023;613. doi:<a href=\"https://doi.org/10.1016/j.apsusc.2022.156101\">10.1016/j.apsusc.2022.156101</a>","ieee":"L. Zhang <i>et al.</i>, “Two-step post-treatment to deliver high performance thermoelectric device with vertical temperature gradient,” <i>Applied Surface Science</i>, vol. 613. Elsevier, 2023.","short":"L. Zhang, X. Liu, T. Wu, S. Xu, G. Suo, X. Ye, X. Hou, Y. Yang, Q. Liu, H. Wang, Applied Surface Science 613 (2023).","apa":"Zhang, L., Liu, X., Wu, T., Xu, S., Suo, G., Ye, X., … Wang, H. (2023). Two-step post-treatment to deliver high performance thermoelectric device with vertical temperature gradient. <i>Applied Surface Science</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.apsusc.2022.156101\">https://doi.org/10.1016/j.apsusc.2022.156101</a>","chicago":"Zhang, Li, Xingyu Liu, Ting Wu, Shengduo Xu, Guoquan Suo, Xiaohui Ye, Xiaojiang Hou, Yanling Yang, Qingfeng Liu, and Hongqiang Wang. “Two-Step Post-Treatment to Deliver High Performance Thermoelectric Device with Vertical Temperature Gradient.” <i>Applied Surface Science</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.apsusc.2022.156101\">https://doi.org/10.1016/j.apsusc.2022.156101</a>."},"type":"journal_article","acknowledgement":"Scientific Research Program Funded by Shaanxi Provincial Education Department (Program No.22JY012), Natural Science Basic Research Program of Shaanxi (Grant No.2022JZ-31), Young Talent fund of University Association for Science and Technology in Shaanxi, China (Grant No.20210411), China Postdoctoral Science Foundation (Grant No. 2021M692621), the Foundation of Shaanxi University of Science & Technology (Grant No. 2017GBJ-03), Open Foundation of Key Laboratory of Auxiliary Chemistry and Technology for Chemical Industry, Ministry of Education, Shaanxi University of Science and Technology (Grant No. KFKT2022-15), and Open Foundation of Shaanxi Collaborative Innovation Center of Industrial Auxiliary Chemistry and Technology, Shaanxi University of Science and Technology (Grant No. KFKT2022-15).","date_created":"2023-01-12T11:55:02Z","volume":613,"author":[{"full_name":"Zhang, Li","last_name":"Zhang","first_name":"Li"},{"first_name":"Xingyu","last_name":"Liu","full_name":"Liu, Xingyu"},{"first_name":"Ting","last_name":"Wu","full_name":"Wu, Ting"},{"full_name":"Xu, Shengduo","last_name":"Xu","first_name":"Shengduo","id":"12ab8624-4c8a-11ec-9e11-e1ac2438f22f"},{"first_name":"Guoquan","last_name":"Suo","full_name":"Suo, Guoquan"},{"full_name":"Ye, Xiaohui","last_name":"Ye","first_name":"Xiaohui"},{"last_name":"Hou","full_name":"Hou, Xiaojiang","first_name":"Xiaojiang"},{"full_name":"Yang, Yanling","last_name":"Yang","first_name":"Yanling"},{"first_name":"Qingfeng","full_name":"Liu, Qingfeng","last_name":"Liu"},{"first_name":"Hongqiang","last_name":"Wang","full_name":"Wang, Hongqiang"}],"intvolume":"       613","scopus_import":"1","doi":"10.1016/j.apsusc.2022.156101","article_number":"156101","oa_version":"None","status":"public","_id":"12113","month":"03","keyword":["Surfaces","Coatings and Films","Condensed Matter Physics","Surfaces and Interfaces","General Physics and Astronomy","General Chemistry"],"language":[{"iso":"eng"}],"year":"2023","OA_type":"closed access","department":[{"_id":"MaIb"}],"article_processing_charge":"No","day":"15","article_type":"original","publisher":"Elsevier"},{"publisher":"Elsevier","article_type":"original","day":"01","has_accepted_license":"1","article_processing_charge":"No","department":[{"_id":"PaSc"}],"language":[{"iso":"eng"}],"year":"2023","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","keyword":["Structural Biology"],"oa":1,"month":"01","oa_version":"Published Version","status":"public","file_date_updated":"2023-08-16T09:36:28Z","_id":"12114","ddc":["570"],"article_number":"100079","scopus_import":"1","doi":"10.1016/j.yjsbx.2022.100079","intvolume":"         7","author":[{"first_name":"Diego F.","last_name":"Gauto","full_name":"Gauto, Diego F."},{"full_name":"Lebedenko, Olga O.","last_name":"Lebedenko","first_name":"Olga O."},{"first_name":"Lea Marie","id":"36336939-eb97-11eb-a6c2-c83f1214ca79","orcid":"0000-0002-6401-5151","last_name":"Becker","full_name":"Becker, Lea Marie"},{"first_name":"Isabel","full_name":"Ayala, Isabel","last_name":"Ayala"},{"first_name":"Roman","last_name":"Lichtenecker","full_name":"Lichtenecker, Roman"},{"first_name":"Nikolai R.","full_name":"Skrynnikov, Nikolai R.","last_name":"Skrynnikov"},{"first_name":"Paul","id":"7B541462-FAF6-11E9-A490-E8DFE5697425","orcid":"0000-0002-9350-7606","last_name":"Schanda","full_name":"Schanda, Paul"}],"date_created":"2023-01-12T11:55:38Z","volume":7,"file":[{"file_size":5132322,"file_id":"14064","relation":"main_file","content_type":"application/pdf","checksum":"b4b1c10a31018aafe053b7d55a470e54","file_name":"2023_JourStrucBiologyX_Gauto.pdf","date_created":"2023-08-16T09:36:28Z","success":1,"date_updated":"2023-08-16T09:36:28Z","creator":"dernst","access_level":"open_access"}],"type":"journal_article","acknowledgement":"The NMR platform in Grenoble is part of the Grenoble Instruct-ERIC center (ISBG; UAR 3518 CNRS-CEA-UGA-EMBL) within the Grenoble Partnership for Structural Biology (PSB), supported by FRISBI (ANR-10-INBS-0005-02) and GRAL, financed within the University Grenoble Alpes graduate school (Ecoles Universitaires de Recherche) CBH-EUR-GS (ANR-17-EURE-0003). This work was supported by the European Research Council (StG-2012-311318-ProtDyn2Function to P.S.) and used the platforms of the Grenoble Instruct Center (ISBG; UMS 3518 CNRS-CEA-UJF-EMBL) with support from FRISBI (ANR-10-INSB-05–02) and GRAL (ANR-10-LABX-49–01) within the Grenoble Partnership for Structural Biology (PSB). We would like to thank Sergei Izmailov for developing and maintaining the pyxmolpp2 library. N.R.S. acknowledges support from St. Petersburg State University in a form of the grant 92425251 and the access to the MRR, MCT and CAMR resource centers. P.S. thanks Malcolm Levitt for pointing out the fact that “tensor asymmetry” is better called “tensor biaxiality”.","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"apa":"Gauto, D. F., Lebedenko, O. O., Becker, L. M., Ayala, I., Lichtenecker, R., Skrynnikov, N. R., &#38; Schanda, P. (2023). Aromatic ring flips in differently packed ubiquitin protein crystals from MAS NMR and MD. <i>Journal of Structural Biology: X</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.yjsbx.2022.100079\">https://doi.org/10.1016/j.yjsbx.2022.100079</a>","chicago":"Gauto, Diego F., Olga O. Lebedenko, Lea Marie Becker, Isabel Ayala, Roman Lichtenecker, Nikolai R. Skrynnikov, and Paul Schanda. “Aromatic Ring Flips in Differently Packed Ubiquitin Protein Crystals from MAS NMR and MD.” <i>Journal of Structural Biology: X</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.yjsbx.2022.100079\">https://doi.org/10.1016/j.yjsbx.2022.100079</a>.","short":"D.F. Gauto, O.O. Lebedenko, L.M. Becker, I. Ayala, R. Lichtenecker, N.R. Skrynnikov, P. Schanda, Journal of Structural Biology: X 7 (2023).","ama":"Gauto DF, Lebedenko OO, Becker LM, et al. Aromatic ring flips in differently packed ubiquitin protein crystals from MAS NMR and MD. <i>Journal of Structural Biology: X</i>. 2023;7. doi:<a href=\"https://doi.org/10.1016/j.yjsbx.2022.100079\">10.1016/j.yjsbx.2022.100079</a>","ieee":"D. F. Gauto <i>et al.</i>, “Aromatic ring flips in differently packed ubiquitin protein crystals from MAS NMR and MD,” <i>Journal of Structural Biology: X</i>, vol. 7. Elsevier, 2023.","ista":"Gauto DF, Lebedenko OO, Becker LM, Ayala I, Lichtenecker R, Skrynnikov NR, Schanda P. 2023. Aromatic ring flips in differently packed ubiquitin protein crystals from MAS NMR and MD. Journal of Structural Biology: X. 7, 100079.","mla":"Gauto, Diego F., et al. “Aromatic Ring Flips in Differently Packed Ubiquitin Protein Crystals from MAS NMR and MD.” <i>Journal of Structural Biology: X</i>, vol. 7, 100079, Elsevier, 2023, doi:<a href=\"https://doi.org/10.1016/j.yjsbx.2022.100079\">10.1016/j.yjsbx.2022.100079</a>."},"pmid":1,"publication":"Journal of Structural Biology: X","publication_identifier":{"issn":["2590-1524"]},"corr_author":"1","date_updated":"2024-10-09T21:04:02Z","title":"Aromatic ring flips in differently packed ubiquitin protein crystals from MAS NMR and MD","publication_status":"published","tmp":{"image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)"},"external_id":{"pmid":["36578472"]},"date_published":"2023-01-01T00:00:00Z","abstract":[{"text":"Probing the dynamics of aromatic side chains provides important insights into the behavior of a protein because flips of aromatic rings in a protein’s hydrophobic core report on breathing motion involving a large part of the protein. Inherently invisible to crystallography, aromatic motions have been primarily studied by solution NMR. The question how packing of proteins in crystals affects ring flips has, thus, remained largely unexplored. Here we apply magic-angle spinning NMR, advanced phenylalanine 1H-13C/2H isotope labeling and MD simulation to a protein in three different crystal packing environments to shed light onto possible impact of packing on ring flips. The flips of the two Phe residues in ubiquitin, both surface exposed, appear remarkably conserved in the different crystal forms, even though the intermolecular packing is quite different: Phe4 flips on a ca. 10–20 ns time scale, and Phe45 are broadened in all crystals, presumably due to µs motion. Our findings suggest that intramolecular influences are more important for ring flips than intermolecular (packing) effects.","lang":"eng"}],"quality_controlled":"1"},{"department":[{"_id":"JoDa"}],"article_processing_charge":"No","day":"01","article_type":"original","publisher":"Springer Nature","keyword":["Oncology","Surgery"],"page":"46-47","year":"2023","language":[{"iso":"eng"}],"_id":"12115","oa_version":"Published Version","status":"public","month":"01","oa":1,"volume":30,"date_created":"2023-01-12T11:56:22Z","related_material":{"record":[{"id":"12205","relation":"other","status":"public"}]},"author":[{"last_name":"Glajzer","full_name":"Glajzer, Jacek","first_name":"Jacek"},{"last_name":"Castillo-Tong","full_name":"Castillo-Tong, Dan Cacsire","first_name":"Dan Cacsire"},{"last_name":"Richter","full_name":"Richter, Rolf","first_name":"Rolf"},{"full_name":"Vergote, Ignace","last_name":"Vergote","first_name":"Ignace"},{"first_name":"Hagen","last_name":"Kulbe","full_name":"Kulbe, Hagen"},{"last_name":"Vanderstichele","full_name":"Vanderstichele, Adriaan","first_name":"Adriaan"},{"first_name":"Ilary","last_name":"Ruscito","full_name":"Ruscito, Ilary"},{"first_name":"Fabian","last_name":"Trillsch","full_name":"Trillsch, Fabian"},{"first_name":"Alexander","full_name":"Mustea, Alexander","last_name":"Mustea"},{"id":"382077BA-F248-11E8-B48F-1D18A9856A87","first_name":"Caroline","full_name":"Kreuzinger, Caroline","last_name":"Kreuzinger"},{"full_name":"Gourley, Charlie","last_name":"Gourley","first_name":"Charlie"},{"full_name":"Gabra, Hani","last_name":"Gabra","first_name":"Hani"},{"first_name":"Eliane T.","last_name":"Taube","full_name":"Taube, Eliane T."},{"first_name":"Oliver","full_name":"Dorigo, Oliver","last_name":"Dorigo"},{"full_name":"Horst, David","last_name":"Horst","first_name":"David"},{"full_name":"Keunecke, Carlotta","last_name":"Keunecke","first_name":"Carlotta"},{"last_name":"Baum","full_name":"Baum, Joanna","first_name":"Joanna"},{"full_name":"Angelotti, Timothy","last_name":"Angelotti","first_name":"Timothy"},{"full_name":"Sehouli, Jalid","last_name":"Sehouli","first_name":"Jalid"},{"last_name":"Braicu","full_name":"Braicu, Elena Ioana","first_name":"Elena Ioana"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.1245/s10434-022-12681-z"}],"intvolume":"        30","doi":"10.1245/s10434-022-12681-z","scopus_import":"1","type":"journal_article","acknowledgement":"This work was supported by European Commission’s Seventh Framework Programme under Grant Agreement No. 279113 (OCTIPS; www.octips.eu).","publication":"Annals of Surgical Oncology","citation":{"mla":"Glajzer, Jacek, et al. “ASO Visual Abstract: Impact of BRCA Mutation Status on Tumor Dissemination Pattern, Surgical Outcome, and Patient Survival in Primary and Recurrent High-Grade Serous Ovarian Cancer (HGSOC). A Multicenter, Retrospective Study of the Ovarian Cancer Therapy—Innovative Models Prolong Survival (OCTIPS) Consortium.” <i>Annals of Surgical Oncology</i>, vol. 30, Springer Nature, 2023, pp. 46–47, doi:<a href=\"https://doi.org/10.1245/s10434-022-12681-z\">10.1245/s10434-022-12681-z</a>.","ista":"Glajzer J, Castillo-Tong DC, Richter R, Vergote I, Kulbe H, Vanderstichele A, Ruscito I, Trillsch F, Mustea A, Kreuzinger C, Gourley C, Gabra H, Taube ET, Dorigo O, Horst D, Keunecke C, Baum J, Angelotti T, Sehouli J, Braicu EI. 2023. ASO Visual Abstract: Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome, and patient survival in primary and recurrent high-grade serous ovarian cancer (HGSOC). A multicenter, retrospective study of the ovarian cancer therapy—innovative models prolong survival (OCTIPS) consortium. Annals of Surgical Oncology. 30, 46–47.","ama":"Glajzer J, Castillo-Tong DC, Richter R, et al. ASO Visual Abstract: Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome, and patient survival in primary and recurrent high-grade serous ovarian cancer (HGSOC). A multicenter, retrospective study of the ovarian cancer therapy—innovative models prolong survival (OCTIPS) consortium. <i>Annals of Surgical Oncology</i>. 2023;30:46-47. doi:<a href=\"https://doi.org/10.1245/s10434-022-12681-z\">10.1245/s10434-022-12681-z</a>","ieee":"J. Glajzer <i>et al.</i>, “ASO Visual Abstract: Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome, and patient survival in primary and recurrent high-grade serous ovarian cancer (HGSOC). A multicenter, retrospective study of the ovarian cancer therapy—innovative models prolong survival (OCTIPS) consortium,” <i>Annals of Surgical Oncology</i>, vol. 30. Springer Nature, pp. 46–47, 2023.","short":"J. Glajzer, D.C. Castillo-Tong, R. Richter, I. Vergote, H. Kulbe, A. Vanderstichele, I. Ruscito, F. Trillsch, A. Mustea, C. Kreuzinger, C. Gourley, H. Gabra, E.T. Taube, O. Dorigo, D. Horst, C. Keunecke, J. Baum, T. Angelotti, J. Sehouli, E.I. Braicu, Annals of Surgical Oncology 30 (2023) 46–47.","apa":"Glajzer, J., Castillo-Tong, D. C., Richter, R., Vergote, I., Kulbe, H., Vanderstichele, A., … Braicu, E. I. (2023). ASO Visual Abstract: Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome, and patient survival in primary and recurrent high-grade serous ovarian cancer (HGSOC). A multicenter, retrospective study of the ovarian cancer therapy—innovative models prolong survival (OCTIPS) consortium. <i>Annals of Surgical Oncology</i>. Springer Nature. <a href=\"https://doi.org/10.1245/s10434-022-12681-z\">https://doi.org/10.1245/s10434-022-12681-z</a>","chicago":"Glajzer, Jacek, Dan Cacsire Castillo-Tong, Rolf Richter, Ignace Vergote, Hagen Kulbe, Adriaan Vanderstichele, Ilary Ruscito, et al. “ASO Visual Abstract: Impact of BRCA Mutation Status on Tumor Dissemination Pattern, Surgical Outcome, and Patient Survival in Primary and Recurrent High-Grade Serous Ovarian Cancer (HGSOC). A Multicenter, Retrospective Study of the Ovarian Cancer Therapy—Innovative Models Prolong Survival (OCTIPS) Consortium.” <i>Annals of Surgical Oncology</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1245/s10434-022-12681-z\">https://doi.org/10.1245/s10434-022-12681-z</a>."},"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","publication_identifier":{"issn":["1068-9265"],"eissn":["1534-4681"]},"quality_controlled":"1","external_id":{"isi":["000879151800001"]},"isi":1,"date_published":"2023-01-01T00:00:00Z","title":"ASO Visual Abstract: Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome, and patient survival in primary and recurrent high-grade serous ovarian cancer (HGSOC). A multicenter, retrospective study of the ovarian cancer therapy—innovative models prolong survival (OCTIPS) consortium","publication_status":"published","date_updated":"2025-04-23T08:43:43Z"},{"oa_version":"Published Version","status":"public","_id":"12158","file_date_updated":"2023-02-27T07:46:45Z","ddc":["570","000"],"month":"02","oa":1,"date_created":"2023-01-12T12:09:09Z","volume":55,"author":[{"first_name":"Peter","last_name":"Zeller","full_name":"Zeller, Peter"},{"orcid":"0000-0003-1732-1559","full_name":"Yeung, Jake","last_name":"Yeung","first_name":"Jake","id":"123012b2-db30-11eb-b4d8-a35840c0551b"},{"last_name":"Viñas Gaza","full_name":"Viñas Gaza, Helena","first_name":"Helena"},{"last_name":"de Barbanson","full_name":"de Barbanson, Buys Anton","first_name":"Buys Anton"},{"first_name":"Vivek","last_name":"Bhardwaj","full_name":"Bhardwaj, Vivek"},{"first_name":"Maria","last_name":"Florescu","full_name":"Florescu, Maria"},{"last_name":"van der Linden","full_name":"van der Linden, Reinier","first_name":"Reinier"},{"full_name":"van Oudenaarden, Alexander","last_name":"van Oudenaarden","first_name":"Alexander"}],"intvolume":"        55","scopus_import":"1","doi":"10.1038/s41588-022-01260-3","department":[{"_id":"ScienComp"}],"has_accepted_license":"1","article_processing_charge":"No","day":"01","publisher":"Springer Nature","article_type":"review","page":"333-345","keyword":["Genetics"],"language":[{"iso":"eng"}],"year":"2023","publication_identifier":{"issn":["1061-4036"],"eissn":["1546-1718"]},"quality_controlled":"1","abstract":[{"text":"Post-translational histone modifications modulate chromatin activity to affect gene expression. How chromatin states underlie lineage choice in single cells is relatively unexplored. We develop sort-assisted single-cell chromatin immunocleavage (sortChIC) and map active (H3K4me1 and H3K4me3) and repressive (H3K27me3 and H3K9me3) histone modifications in the mouse bone marrow. During differentiation, hematopoietic stem and progenitor cells (HSPCs) acquire active chromatin states mediated by cell-type-specifying transcription factors, which are unique for each lineage. By contrast, most alterations in repressive marks during differentiation occur independent of the final cell type. Chromatin trajectory analysis shows that lineage choice at the chromatin level occurs at the progenitor stage. Joint profiling of H3K4me1 and H3K9me3 demonstrates that cell types within the myeloid lineage have distinct active chromatin but share similar myeloid-specific heterochromatin states. This implies a hierarchical regulation of chromatin during hematopoiesis: heterochromatin dynamics distinguish differentiation trajectories and lineages, while euchromatin dynamics reflect cell types within lineages.","lang":"eng"}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"date_published":"2023-02-01T00:00:00Z","external_id":{"pmid":["36539617"]},"date_updated":"2025-04-23T08:45:00Z","title":"Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis","publication_status":"published","acknowledgement":"We thank A. Giladi for sharing mRNA abundance tables of cell types together with J. van den Berg for critical reading of the manuscript. We thank M. Bartosovic for sharing method comparison data. pK19pA-MN was a gift from Ulrich Laemmli (Addgene plasmid 86973, http://n2t.net/addgene:86973; RRID:Addgene_86973). Figure 8 is adopted from Hematopoiesis (human) diagram by A. Rad and M. Häggström under CC-BY-SA 3.0 license. This work was supported by European Research Council Advanced under grant ERC-AdG 742225-IntScOmics and Nederlandse Organisatie voor Wetenschappelijk Onderzoek (NWO) TOP award NWO-CW 714.016.001. The SNF (P2BSP3-174991), HFSP (LT000209/2018-L) and Marie Skłodowska-Curie Actions (798573) supported P.Z. The SNF (P2ELP3_184488) and HFSP (LT000097/2019-L) supported J.Y. and the EMBO LTF (ALTF 1197–2019) supported V.B. This work is part of the Oncode Institute, which is partly financed by the Dutch Cancer Society. The funders had no role in study design, data collection and analysis, decision to publish or preparation of the manuscript.","type":"journal_article","file":[{"success":1,"date_updated":"2023-02-27T07:46:45Z","access_level":"open_access","creator":"dernst","date_created":"2023-02-27T07:46:45Z","file_name":"2023_NatureGenetics_Zeller.pdf","content_type":"application/pdf","relation":"main_file","checksum":"6fdb8e34fbeea63edd0f2c6c2cc5823e","file_size":21484855,"file_id":"12688"}],"publication":"Nature Genetics","pmid":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"ama":"Zeller P, Yeung J, Viñas Gaza H, et al. Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis. <i>Nature Genetics</i>. 2023;55:333-345. doi:<a href=\"https://doi.org/10.1038/s41588-022-01260-3\">10.1038/s41588-022-01260-3</a>","ieee":"P. Zeller <i>et al.</i>, “Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis,” <i>Nature Genetics</i>, vol. 55. Springer Nature, pp. 333–345, 2023.","ista":"Zeller P, Yeung J, Viñas Gaza H, de Barbanson BA, Bhardwaj V, Florescu M, van der Linden R, van Oudenaarden A. 2023. Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis. Nature Genetics. 55, 333–345.","mla":"Zeller, Peter, et al. “Single-Cell SortChIC Identifies Hierarchical Chromatin Dynamics during Hematopoiesis.” <i>Nature Genetics</i>, vol. 55, Springer Nature, 2023, pp. 333–45, doi:<a href=\"https://doi.org/10.1038/s41588-022-01260-3\">10.1038/s41588-022-01260-3</a>.","chicago":"Zeller, Peter, Jake Yeung, Helena Viñas Gaza, Buys Anton de Barbanson, Vivek Bhardwaj, Maria Florescu, Reinier van der Linden, and Alexander van Oudenaarden. “Single-Cell SortChIC Identifies Hierarchical Chromatin Dynamics during Hematopoiesis.” <i>Nature Genetics</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s41588-022-01260-3\">https://doi.org/10.1038/s41588-022-01260-3</a>.","apa":"Zeller, P., Yeung, J., Viñas Gaza, H., de Barbanson, B. A., Bhardwaj, V., Florescu, M., … van Oudenaarden, A. (2023). Single-cell sortChIC identifies hierarchical chromatin dynamics during hematopoiesis. <i>Nature Genetics</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41588-022-01260-3\">https://doi.org/10.1038/s41588-022-01260-3</a>","short":"P. Zeller, J. Yeung, H. Viñas Gaza, B.A. de Barbanson, V. Bhardwaj, M. Florescu, R. van der Linden, A. van Oudenaarden, Nature Genetics 55 (2023) 333–345."}},{"day":"02","article_type":"review","publisher":"Elsevier","department":[{"_id":"EdHa"}],"has_accepted_license":"1","article_processing_charge":"Yes (via OA deal)","language":[{"iso":"eng"}],"year":"2023","page":"58-65","keyword":["Cell Biology","Developmental Biology"],"month":"12","oa":1,"oa_version":"Published Version","status":"public","_id":"12162","ddc":["570"],"file_date_updated":"2024-01-08T10:16:04Z","scopus_import":"1","doi":"10.1016/j.semcdb.2022.11.005","date_created":"2023-01-12T12:09:47Z","volume":"150-151","author":[{"id":"43BE2298-F248-11E8-B48F-1D18A9856A87","first_name":"Bernat","full_name":"Corominas-Murtra, Bernat","last_name":"Corominas-Murtra","orcid":"0000-0001-9806-5643"},{"first_name":"Edouard B","id":"3A9DB764-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-6005-1561","full_name":"Hannezo, Edouard B","last_name":"Hannezo"}],"file":[{"file_name":"2023_SeminarsCellDevBiology_CorominasMurtra.pdf","date_created":"2024-01-08T10:16:04Z","success":1,"date_updated":"2024-01-08T10:16:04Z","creator":"dernst","access_level":"open_access","file_size":1343750,"file_id":"14741","relation":"main_file","content_type":"application/pdf","checksum":"c619887cf130f4649bf3035417186004"}],"acknowledgement":"This work received funding from the ERC under the European Union’s Horizon 2020 research and innovation programme (grant agreement No. 851288 to E.H.).\r\nB. C-M wants to acknowledge the support of the field of excellence Complexity of Life, in Basic Research and Innovation of the University of Graz.","type":"journal_article","pmid":1,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"short":"B. Corominas-Murtra, E.B. Hannezo, Seminars in Cell &#38; Developmental Biology 150–151 (2023) 58–65.","chicago":"Corominas-Murtra, Bernat, and Edouard B Hannezo. “Modelling the Dynamics of Mammalian Gut Homeostasis.” <i>Seminars in Cell &#38; Developmental Biology</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.semcdb.2022.11.005\">https://doi.org/10.1016/j.semcdb.2022.11.005</a>.","apa":"Corominas-Murtra, B., &#38; Hannezo, E. B. (2023). Modelling the dynamics of mammalian gut homeostasis. <i>Seminars in Cell &#38; Developmental Biology</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.semcdb.2022.11.005\">https://doi.org/10.1016/j.semcdb.2022.11.005</a>","ista":"Corominas-Murtra B, Hannezo EB. 2023. Modelling the dynamics of mammalian gut homeostasis. Seminars in Cell &#38; Developmental Biology. 150–151, 58–65.","mla":"Corominas-Murtra, Bernat, and Edouard B. Hannezo. “Modelling the Dynamics of Mammalian Gut Homeostasis.” <i>Seminars in Cell &#38; Developmental Biology</i>, vol. 150–151, Elsevier, 2023, pp. 58–65, doi:<a href=\"https://doi.org/10.1016/j.semcdb.2022.11.005\">10.1016/j.semcdb.2022.11.005</a>.","ieee":"B. Corominas-Murtra and E. B. Hannezo, “Modelling the dynamics of mammalian gut homeostasis,” <i>Seminars in Cell &#38; Developmental Biology</i>, vol. 150–151. Elsevier, pp. 58–65, 2023.","ama":"Corominas-Murtra B, Hannezo EB. Modelling the dynamics of mammalian gut homeostasis. <i>Seminars in Cell &#38; Developmental Biology</i>. 2023;150-151:58-65. doi:<a href=\"https://doi.org/10.1016/j.semcdb.2022.11.005\">10.1016/j.semcdb.2022.11.005</a>"},"publication":"Seminars in Cell & Developmental Biology","publication_identifier":{"issn":["1084-9521"]},"corr_author":"1","ec_funded":1,"external_id":{"pmid":["36470715"],"isi":["001053522200001"]},"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"isi":1,"date_published":"2023-12-02T00:00:00Z","date_updated":"2025-04-14T07:52:27Z","title":"Modelling the dynamics of mammalian gut homeostasis","publication_status":"published","project":[{"grant_number":"851288","call_identifier":"H2020","_id":"05943252-7A3F-11EA-A408-12923DDC885E","name":"Design Principles of Branching Morphogenesis"}],"quality_controlled":"1","abstract":[{"text":"Homeostatic balance in the intestinal epithelium relies on a fast cellular turnover, which is coordinated by an intricate interplay between biochemical signalling, mechanical forces and organ geometry. We review recent modelling approaches that have been developed to understand different facets of this remarkable homeostatic equilibrium. Existing models offer different, albeit complementary, perspectives on the problem. First, biomechanical models aim to explain the local and global mechanical stresses driving cell renewal as well as tissue shape maintenance. Second, compartmental models provide insights into the conditions necessary to keep a constant flow of cells with well-defined ratios of cell types, and how perturbations can lead to an unbalance of relative compartment sizes. A third family of models address, at the cellular level, the nature and regulation of stem fate choices that are necessary to fuel cellular turnover. We also review how these different approaches are starting to be integrated together across scales, to provide quantitative predictions and new conceptual frameworks to think about the dynamics of cell renewal in complex tissues.","lang":"eng"}]},{"publisher":"Wiley","article_type":"review","day":"01","issue":"6","has_accepted_license":"1","article_processing_charge":"Yes (via OA deal)","department":[{"_id":"MaLo"}],"language":[{"iso":"eng"}],"year":"2023","page":"762-777","keyword":["Cell Biology","Genetics","Molecular Biology","Biochemistry","Structural Biology","Biophysics"],"oa":1,"month":"03","oa_version":"Published Version","status":"public","_id":"12163","ddc":["570"],"file_date_updated":"2023-08-16T08:31:04Z","scopus_import":"1","doi":"10.1002/1873-3468.14540","intvolume":"       597","author":[{"first_name":"Martin","id":"462D4284-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-7309-9724","full_name":"Loose, Martin","last_name":"Loose"},{"orcid":"0000-0002-3580-2906","last_name":"Auer","full_name":"Auer, Albert","first_name":"Albert","id":"3018E8C2-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Brognara","full_name":"Brognara, Gabriel","first_name":"Gabriel","id":"D96FFDA0-A884-11E9-9968-DC26E6697425"},{"full_name":"Budiman, Hanifatul R","last_name":"Budiman","first_name":"Hanifatul R","id":"55380f95-15b2-11ec-abd3-aff8e230696b"},{"first_name":"Lukasz M","id":"e3a512e2-4bbe-11eb-a68a-e3857a7844c2","last_name":"Kowalski","full_name":"Kowalski, Lukasz M"},{"full_name":"Matijevic, Ivana","last_name":"Matijevic","first_name":"Ivana","id":"83c17ce3-15b2-11ec-abd3-f486545870bd"}],"date_created":"2023-01-12T12:09:58Z","volume":597,"file":[{"creator":"dernst","access_level":"open_access","date_updated":"2023-08-16T08:31:04Z","success":1,"file_name":"2023_FEBSLetters_Loose.pdf","date_created":"2023-08-16T08:31:04Z","checksum":"7492244d3f9c5faa1347ef03f6e5bc84","relation":"main_file","content_type":"application/pdf","file_id":"14063","file_size":3148143}],"type":"journal_article","acknowledgement":"The authors acknowledge support from IST Austria and helpful comments from the anonymous reviewers that helped to improve this manuscript. We apologize to the authors of primary literature and outstanding research not cited here due to space restraints.","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"apa":"Loose, M., Auer, A., Brognara, G., Budiman, H. R., Kowalski, L. M., &#38; Matijevic, I. (2023). In vitro reconstitution of small GTPase regulation. <i>FEBS Letters</i>. Wiley. <a href=\"https://doi.org/10.1002/1873-3468.14540\">https://doi.org/10.1002/1873-3468.14540</a>","chicago":"Loose, Martin, Albert Auer, Gabriel Brognara, Hanifatul R Budiman, Lukasz M Kowalski, and Ivana Matijevic. “In Vitro Reconstitution of Small GTPase Regulation.” <i>FEBS Letters</i>. Wiley, 2023. <a href=\"https://doi.org/10.1002/1873-3468.14540\">https://doi.org/10.1002/1873-3468.14540</a>.","short":"M. Loose, A. Auer, G. Brognara, H.R. Budiman, L.M. Kowalski, I. Matijevic, FEBS Letters 597 (2023) 762–777.","ieee":"M. Loose, A. Auer, G. Brognara, H. R. Budiman, L. M. Kowalski, and I. Matijevic, “In vitro reconstitution of small GTPase regulation,” <i>FEBS Letters</i>, vol. 597, no. 6. Wiley, pp. 762–777, 2023.","ama":"Loose M, Auer A, Brognara G, Budiman HR, Kowalski LM, Matijevic I. In vitro reconstitution of small GTPase regulation. <i>FEBS Letters</i>. 2023;597(6):762-777. doi:<a href=\"https://doi.org/10.1002/1873-3468.14540\">10.1002/1873-3468.14540</a>","ista":"Loose M, Auer A, Brognara G, Budiman HR, Kowalski LM, Matijevic I. 2023. In vitro reconstitution of small GTPase regulation. FEBS Letters. 597(6), 762–777.","mla":"Loose, Martin, et al. “In Vitro Reconstitution of Small GTPase Regulation.” <i>FEBS Letters</i>, vol. 597, no. 6, Wiley, 2023, pp. 762–77, doi:<a href=\"https://doi.org/10.1002/1873-3468.14540\">10.1002/1873-3468.14540</a>."},"pmid":1,"publication":"FEBS Letters","publication_identifier":{"issn":["0014-5793"],"eissn":["1873-3468"]},"corr_author":"1","date_updated":"2024-10-09T21:03:42Z","publication_status":"published","title":"In vitro reconstitution of small GTPase regulation","isi":1,"tmp":{"image":"/images/cc_by_nc_nd.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)"},"external_id":{"pmid":["36448231"],"isi":["000891573000001"]},"date_published":"2023-03-01T00:00:00Z","quality_controlled":"1","abstract":[{"text":"Small GTPases play essential roles in the organization of eukaryotic cells. In recent years, it has become clear that their intracellular functions result from intricate biochemical networks of the GTPase and their regulators that dynamically bind to a membrane surface. Due to the inherent complexities of their interactions, however, revealing the underlying mechanisms of action is often difficult to achieve from in vivo studies. This review summarizes in vitro reconstitution approaches developed to obtain a better mechanistic understanding of how small GTPase activities are regulated in space and time.","lang":"eng"}]},{"article_processing_charge":"No","department":[{"_id":"KrPi"}],"article_type":"original","publisher":"Springer Nature","day":"01","page":"29-43","keyword":["Computational Theory and Mathematics","Computer Networks and Communications","Hardware and Architecture","Theoretical Computer Science"],"language":[{"iso":"eng"}],"year":"2023","oa_version":"Preprint","status":"public","_id":"12164","oa":1,"month":"03","main_file_link":[{"open_access":"1","url":"https://drops.dagstuhl.de/opus/volltexte/2019/11310/"}],"author":[{"first_name":"Mirza Ahad","id":"3EDE6DE4-AA5A-11E9-986D-341CE6697425","full_name":"Baig, Mirza Ahad","last_name":"Baig"},{"last_name":"Hendler","full_name":"Hendler, Danny","first_name":"Danny"},{"last_name":"Milani","full_name":"Milani, Alessia","first_name":"Alessia"},{"first_name":"Corentin","full_name":"Travers, Corentin","last_name":"Travers"}],"date_created":"2023-01-12T12:10:08Z","volume":36,"scopus_import":"1","doi":"10.1007/s00446-022-00439-5","intvolume":"        36","acknowledgement":"A preliminary version of this work appeared in DISC’19. Mirza Ahad Baig, Alessia Milani and Corentin Travers are supported by ANR projects Descartes and FREDDA. Mirza Ahad Baig is supported by UMI Relax. Danny Hendler is supported by the Israel Science Foundation (Grants 380/18 and 1425/22).","type":"journal_article","publication":"Distributed Computing","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"apa":"Baig, M. A., Hendler, D., Milani, A., &#38; Travers, C. (2023). Long-lived counters with polylogarithmic amortized step complexity. <i>Distributed Computing</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00446-022-00439-5\">https://doi.org/10.1007/s00446-022-00439-5</a>","chicago":"Baig, Mirza Ahad, Danny Hendler, Alessia Milani, and Corentin Travers. “Long-Lived Counters with Polylogarithmic Amortized Step Complexity.” <i>Distributed Computing</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1007/s00446-022-00439-5\">https://doi.org/10.1007/s00446-022-00439-5</a>.","short":"M.A. Baig, D. Hendler, A. Milani, C. Travers, Distributed Computing 36 (2023) 29–43.","ieee":"M. A. Baig, D. Hendler, A. Milani, and C. Travers, “Long-lived counters with polylogarithmic amortized step complexity,” <i>Distributed Computing</i>, vol. 36. Springer Nature, pp. 29–43, 2023.","ama":"Baig MA, Hendler D, Milani A, Travers C. Long-lived counters with polylogarithmic amortized step complexity. <i>Distributed Computing</i>. 2023;36:29-43. doi:<a href=\"https://doi.org/10.1007/s00446-022-00439-5\">10.1007/s00446-022-00439-5</a>","ista":"Baig MA, Hendler D, Milani A, Travers C. 2023. Long-lived counters with polylogarithmic amortized step complexity. Distributed Computing. 36, 29–43.","mla":"Baig, Mirza Ahad, et al. “Long-Lived Counters with Polylogarithmic Amortized Step Complexity.” <i>Distributed Computing</i>, vol. 36, Springer Nature, 2023, pp. 29–43, doi:<a href=\"https://doi.org/10.1007/s00446-022-00439-5\">10.1007/s00446-022-00439-5</a>."},"publication_identifier":{"eissn":["1432-0452"],"issn":["0178-2770"]},"quality_controlled":"1","abstract":[{"text":"A shared-memory counter is a widely-used and well-studied concurrent object. It supports two operations: An Inc operation that increases its value by 1 and a Read operation that returns its current value. In Jayanti et al (SIAM J Comput, 30(2), 2000), Jayanti, Tan and Toueg proved a linear lower bound on the worst-case step complexity of obstruction-free implementations, from read-write registers, of a large class of shared objects that includes counters. The lower bound leaves open the question of finding counter implementations with sub-linear amortized step complexity. In this work, we address this gap. We show that n-process, wait-free and linearizable counters can be implemented from read-write registers with O(log2n) amortized step complexity. This is the first counter algorithm from read-write registers that provides sub-linear amortized step complexity in executions of arbitrary length. Since a logarithmic lower bound on the amortized step complexity of obstruction-free counter implementations exists, our upper bound is within a logarithmic factor of the optimal. The worst-case step complexity of the construction remains linear, which is optimal. This is obtained thanks to a new max register construction with O(logn) amortized step complexity in executions of arbitrary length in which the value stored in the register does not grow too quickly. We then leverage an existing counter algorithm by Aspnes, Attiya and Censor-Hillel [1] in which we “plug” our max register implementation to show that it remains linearizable while achieving O(log2n) amortized step complexity.","lang":"eng"}],"date_updated":"2023-08-16T08:39:36Z","title":"Long-lived counters with polylogarithmic amortized step complexity","publication_status":"published","external_id":{"isi":["000890138700001"]},"isi":1,"date_published":"2023-03-01T00:00:00Z"},{"day":"01","article_type":"original","publisher":"Springer Nature","department":[{"_id":"BjHo"}],"article_processing_charge":"No","year":"2023","language":[{"iso":"eng"}],"keyword":["General Physics and Astronomy"],"page":"62-72","month":"01","_id":"12165","oa_version":"None","status":"public","intvolume":"         5","doi":"10.1038/s42254-022-00539-y","scopus_import":"1","volume":5,"date_created":"2023-01-12T12:10:18Z","author":[{"first_name":"Björn","id":"3A374330-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-2057-2754","last_name":"Hof","full_name":"Hof, Björn"}],"type":"journal_article","citation":{"apa":"Hof, B. (2023). Directed percolation and the transition to turbulence. <i>Nature Reviews Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s42254-022-00539-y\">https://doi.org/10.1038/s42254-022-00539-y</a>","chicago":"Hof, Björn. “Directed Percolation and the Transition to Turbulence.” <i>Nature Reviews Physics</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s42254-022-00539-y\">https://doi.org/10.1038/s42254-022-00539-y</a>.","short":"B. Hof, Nature Reviews Physics 5 (2023) 62–72.","ieee":"B. Hof, “Directed percolation and the transition to turbulence,” <i>Nature Reviews Physics</i>, vol. 5. Springer Nature, pp. 62–72, 2023.","ama":"Hof B. Directed percolation and the transition to turbulence. <i>Nature Reviews Physics</i>. 2023;5:62-72. doi:<a href=\"https://doi.org/10.1038/s42254-022-00539-y\">10.1038/s42254-022-00539-y</a>","mla":"Hof, Björn. “Directed Percolation and the Transition to Turbulence.” <i>Nature Reviews Physics</i>, vol. 5, Springer Nature, 2023, pp. 62–72, doi:<a href=\"https://doi.org/10.1038/s42254-022-00539-y\">10.1038/s42254-022-00539-y</a>.","ista":"Hof B. 2023. Directed percolation and the transition to turbulence. Nature Reviews Physics. 5, 62–72."},"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","publication":"Nature Reviews Physics","corr_author":"1","publication_identifier":{"eissn":["2522-5820"]},"date_published":"2023-01-01T00:00:00Z","external_id":{"isi":["000890148700002"]},"isi":1,"publication_status":"published","title":"Directed percolation and the transition to turbulence","date_updated":"2024-10-09T21:04:02Z","quality_controlled":"1","abstract":[{"lang":"eng","text":"It may come as a surprise that a phenomenon as ubiquitous and prominent as the transition from laminar to turbulent flow has resisted combined efforts by physicists, engineers and mathematicians, and remained unresolved for almost one and a half centuries. In recent years, various studies have proposed analogies to directed percolation, a well-known universality class in statistical mechanics, which describes a non-equilibrium phase transition from a fluctuating active phase into an absorbing state. It is this unlikely relation between the multiscale, high-dimensional dynamics that signify the transition process in virtually all flows of practical relevance, and the arguably most basic non-equilibrium phase transition, that so far has mainly been the subject of model studies, which I review in this Perspective."}]},{"scopus_import":"1","doi":"10.1111/mec.16779","intvolume":"        32","main_file_link":[{"url":"https://doi.org/10.1111/mec.16779","open_access":"1"}],"author":[{"id":"3C147470-F248-11E8-B48F-1D18A9856A87","first_name":"Anja M","full_name":"Westram, Anja M","last_name":"Westram","orcid":"0000-0003-1050-4969"},{"first_name":"Roger","last_name":"Butlin","full_name":"Butlin, Roger"}],"date_created":"2023-01-12T12:10:28Z","volume":32,"oa":1,"month":"01","oa_version":"Published Version","status":"public","_id":"12166","OA_type":"free access","language":[{"iso":"eng"}],"year":"2023","page":"26-29","keyword":["Genetics","Ecology","Evolution","Behavior and Systematics"],"publisher":"Wiley","article_type":"editorial","day":"01","issue":"1","article_processing_charge":"No","department":[{"_id":"NiBa"}],"date_updated":"2025-04-23T08:44:33Z","title":"Professor Kerstin Johannesson–winner of the 2022 Molecular Ecology Prize","publication_status":"published","isi":1,"external_id":{"pmid":["36443277"],"isi":["000892168800001"]},"date_published":"2023-01-01T00:00:00Z","quality_controlled":"1","abstract":[{"lang":"eng","text":"Kerstin Johannesson is a marine ecologist and evolutionary biologist based at the Tjärnö Marine Laboratory of the University of Gothenburg, which is situated in the beautiful Kosterhavet National Park on the Swedish west coast. Her work, using marine periwinkles (especially Littorina saxatilis and L. fabalis) as main model systems, has made a remarkable contribution to marine evolutionary biology and our understanding of local adaptation and its genetic underpinnings."}],"publication_identifier":{"eissn":["1365-294X"],"issn":["0962-1083"]},"corr_author":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"apa":"Westram, A. M., &#38; Butlin, R. (2023). Professor Kerstin Johannesson–winner of the 2022 Molecular Ecology Prize. <i>Molecular Ecology</i>. Wiley. <a href=\"https://doi.org/10.1111/mec.16779\">https://doi.org/10.1111/mec.16779</a>","chicago":"Westram, Anja M, and Roger Butlin. “Professor Kerstin Johannesson–Winner of the 2022 Molecular Ecology Prize.” <i>Molecular Ecology</i>. Wiley, 2023. <a href=\"https://doi.org/10.1111/mec.16779\">https://doi.org/10.1111/mec.16779</a>.","short":"A.M. Westram, R. Butlin, Molecular Ecology 32 (2023) 26–29.","ieee":"A. M. Westram and R. Butlin, “Professor Kerstin Johannesson–winner of the 2022 Molecular Ecology Prize,” <i>Molecular Ecology</i>, vol. 32, no. 1. Wiley, pp. 26–29, 2023.","ama":"Westram AM, Butlin R. Professor Kerstin Johannesson–winner of the 2022 Molecular Ecology Prize. <i>Molecular Ecology</i>. 2023;32(1):26-29. doi:<a href=\"https://doi.org/10.1111/mec.16779\">10.1111/mec.16779</a>","mla":"Westram, Anja M., and Roger Butlin. “Professor Kerstin Johannesson–Winner of the 2022 Molecular Ecology Prize.” <i>Molecular Ecology</i>, vol. 32, no. 1, Wiley, 2023, pp. 26–29, doi:<a href=\"https://doi.org/10.1111/mec.16779\">10.1111/mec.16779</a>.","ista":"Westram AM, Butlin R. 2023. Professor Kerstin Johannesson–winner of the 2022 Molecular Ecology Prize. Molecular Ecology. 32(1), 26–29."},"pmid":1,"publication":"Molecular Ecology","type":"journal_article"},{"title":"Experimental analysis of Cascade CSTRs with step and pulse inputs","publication_status":"published","date_updated":"2023-08-16T09:08:11Z","date_published":"2023-03-20T00:00:00Z","quality_controlled":"1","abstract":[{"text":"In industrial reactors and equipment, non-ideality is quite a common phenomenon rather than an exception. These deviations from ideality impact the process's overall efficiency and the effectiveness of the equipment. To recognize the associated non-ideality, one needs to have enough understanding of the formulation of the equations and in-depth knowledge of the residence time distribution (RTD) data of real reactors. In the current work, step input and pulse input were used to create RTD data for Cascade continuous stirred tank reactors (CSTRs). For the aforementioned configuration, experiments were run at various flow rates to validate the developed characteristic equations. To produce RTD data, distilled water was utilized as the flowing fluid, and NaOH was the tracer substance. The ideal behavior of tracer concentration exits age distribution, and cumulative fraction for each setup and each input was plotted and experimental results were compared with perfect behavior. Deviation of concentration exit age distribution and cumulative fractional distribution from ideal behavior is more in pulse input as compared to a step input. For ideal cases, the exit age distribution curve and cumulative fraction curves are independent of the type of input. But a significant difference was observed for the two cases, which may be due to non-measurable fluctuations in volumetric flow rate, non-achievement of instant injection of tracer in case of pulse input, and slight variations in the sampling period. Further, with increasing flow rate, concentration, exit age, and cumulative fractional curves shifted upward, and this behavior matches with the actual case.","lang":"eng"}],"publication_identifier":{"issn":["2214-7853"]},"citation":{"chicago":"Khatoon, Bushra, Shoaib Kamil, Hitesh Babu, and M. Siraj Alam. “Experimental Analysis of Cascade CSTRs with Step and Pulse Inputs.” <i>Materials Today: Proceedings</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.matpr.2022.11.037\">https://doi.org/10.1016/j.matpr.2022.11.037</a>.","apa":"Khatoon, B., Kamil, S., Babu, H., &#38; Siraj Alam, M. (2023). Experimental analysis of Cascade CSTRs with step and pulse inputs. <i>Materials Today: Proceedings</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.matpr.2022.11.037\">https://doi.org/10.1016/j.matpr.2022.11.037</a>","short":"B. Khatoon, S. Kamil, H. Babu, M. Siraj Alam, Materials Today: Proceedings 78 (2023) 40–47.","ieee":"B. Khatoon, S. Kamil, H. Babu, and M. Siraj Alam, “Experimental analysis of Cascade CSTRs with step and pulse inputs,” <i>Materials Today: Proceedings</i>, vol. 78, no. Part 1. Elsevier, pp. 40–47, 2023.","ama":"Khatoon B, Kamil S, Babu H, Siraj Alam M. Experimental analysis of Cascade CSTRs with step and pulse inputs. <i>Materials Today: Proceedings</i>. 2023;78(Part 1):40-47. doi:<a href=\"https://doi.org/10.1016/j.matpr.2022.11.037\">10.1016/j.matpr.2022.11.037</a>","mla":"Khatoon, Bushra, et al. “Experimental Analysis of Cascade CSTRs with Step and Pulse Inputs.” <i>Materials Today: Proceedings</i>, vol. 78, no. Part 1, Elsevier, 2023, pp. 40–47, doi:<a href=\"https://doi.org/10.1016/j.matpr.2022.11.037\">10.1016/j.matpr.2022.11.037</a>.","ista":"Khatoon B, Kamil S, Babu H, Siraj Alam M. 2023. Experimental analysis of Cascade CSTRs with step and pulse inputs. Materials Today: Proceedings. 78(Part 1), 40–47."},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication":"Materials Today: Proceedings","type":"journal_article","doi":"10.1016/j.matpr.2022.11.037","scopus_import":"1","intvolume":"        78","author":[{"full_name":"Khatoon, Bushra","last_name":"Khatoon","first_name":"Bushra"},{"id":"185a19af-dc7d-11ea-9b2f-8eb2201959e9","first_name":"Shoaib","full_name":"Kamil, Shoaib","last_name":"Kamil"},{"full_name":"Babu, Hitesh","last_name":"Babu","first_name":"Hitesh"},{"first_name":"M.","last_name":"Siraj Alam","full_name":"Siraj Alam, M."}],"volume":78,"date_created":"2023-01-12T12:11:26Z","month":"03","_id":"12172","status":"public","oa_version":"None","year":"2023","language":[{"iso":"eng"}],"keyword":["General Medicine"],"page":"40-47","article_type":"original","publisher":"Elsevier","issue":"Part 1","day":"20","article_processing_charge":"No","department":[{"_id":"BjHo"}]},{"language":[{"iso":"eng"}],"year":"2023","page":"1505-1560","publisher":"Springer Nature","article_type":"original","day":"01","article_processing_charge":"No","department":[{"_id":"RoSe"}],"scopus_import":"1","doi":"10.1007/s00023-022-01252-3","intvolume":"        24","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2205.15284"}],"author":[{"first_name":"Chiara","id":"342E7E22-F248-11E8-B48F-1D18A9856A87","full_name":"Boccato, Chiara","last_name":"Boccato"},{"first_name":"Robert","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6781-0521","full_name":"Seiringer, Robert","last_name":"Seiringer"}],"date_created":"2023-01-15T23:00:52Z","volume":24,"oa":1,"month":"05","status":"public","oa_version":"Preprint","_id":"12183","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"short":"C. Boccato, R. Seiringer, Annales Henri Poincare 24 (2023) 1505–1560.","chicago":"Boccato, Chiara, and Robert Seiringer. “The Bose Gas in a Box with Neumann Boundary Conditions.” <i>Annales Henri Poincare</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1007/s00023-022-01252-3\">https://doi.org/10.1007/s00023-022-01252-3</a>.","apa":"Boccato, C., &#38; Seiringer, R. (2023). The Bose Gas in a box with Neumann boundary conditions. <i>Annales Henri Poincare</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00023-022-01252-3\">https://doi.org/10.1007/s00023-022-01252-3</a>","mla":"Boccato, Chiara, and Robert Seiringer. “The Bose Gas in a Box with Neumann Boundary Conditions.” <i>Annales Henri Poincare</i>, vol. 24, Springer Nature, 2023, pp. 1505–60, doi:<a href=\"https://doi.org/10.1007/s00023-022-01252-3\">10.1007/s00023-022-01252-3</a>.","ista":"Boccato C, Seiringer R. 2023. The Bose Gas in a box with Neumann boundary conditions. Annales Henri Poincare. 24, 1505–1560.","ieee":"C. Boccato and R. Seiringer, “The Bose Gas in a box with Neumann boundary conditions,” <i>Annales Henri Poincare</i>, vol. 24. Springer Nature, pp. 1505–1560, 2023.","ama":"Boccato C, Seiringer R. The Bose Gas in a box with Neumann boundary conditions. <i>Annales Henri Poincare</i>. 2023;24:1505-1560. doi:<a href=\"https://doi.org/10.1007/s00023-022-01252-3\">10.1007/s00023-022-01252-3</a>"},"publication":"Annales Henri Poincare","type":"journal_article","acknowledgement":"Funding from the European Union’s Horizon 2020 research and innovation programme under the ERC grant agreement No 694227 is gratefully acknowledged.","date_updated":"2025-04-14T07:26:59Z","publication_status":"published","title":"The Bose Gas in a box with Neumann boundary conditions","project":[{"grant_number":"694227","call_identifier":"H2020","_id":"25C6DC12-B435-11E9-9278-68D0E5697425","name":"Analysis of quantum many-body systems"}],"date_published":"2023-05-01T00:00:00Z","external_id":{"isi":["000910751800002"],"arxiv":["2205.15284"]},"isi":1,"abstract":[{"lang":"eng","text":"We consider a gas of n bosonic particles confined in a box [−ℓ/2,ℓ/2]3 with Neumann boundary conditions. We prove Bose–Einstein condensation in the Gross–Pitaevskii regime, with an optimal bound on the condensate depletion. Moreover, our lower bound for the ground state energy in a small box [−ℓ/2,ℓ/2]3 implies (via Neumann bracketing) a lower bound for the ground state energy of N bosons in a large box [−L/2,L/2]3 with density ρ=N/L3 in the thermodynamic limit."}],"quality_controlled":"1","publication_identifier":{"issn":["1424-0637"]},"corr_author":"1","ec_funded":1,"arxiv":1},{"author":[{"last_name":"Glajzer","full_name":"Glajzer, Jacek","first_name":"Jacek"},{"first_name":"Dan Cacsire","last_name":"Castillo-Tong","full_name":"Castillo-Tong, Dan Cacsire"},{"last_name":"Richter","full_name":"Richter, Rolf","first_name":"Rolf"},{"first_name":"Ignace","last_name":"Vergote","full_name":"Vergote, Ignace"},{"first_name":"Hagen","full_name":"Kulbe, Hagen","last_name":"Kulbe"},{"first_name":"Adriaan","full_name":"Vanderstichele, Adriaan","last_name":"Vanderstichele"},{"first_name":"Ilary","full_name":"Ruscito, Ilary","last_name":"Ruscito"},{"last_name":"Trillsch","full_name":"Trillsch, Fabian","first_name":"Fabian"},{"full_name":"Mustea, Alexander","last_name":"Mustea","first_name":"Alexander"},{"last_name":"Kreuzinger","full_name":"Kreuzinger, Caroline","id":"382077BA-F248-11E8-B48F-1D18A9856A87","first_name":"Caroline"},{"first_name":"Charlie","last_name":"Gourley","full_name":"Gourley, Charlie"},{"full_name":"Gabra, Hani","last_name":"Gabra","first_name":"Hani"},{"last_name":"Taube","full_name":"Taube, Eliane T.","first_name":"Eliane T."},{"full_name":"Dorigo, Oliver","last_name":"Dorigo","first_name":"Oliver"},{"first_name":"David","last_name":"Horst","full_name":"Horst, David"},{"first_name":"Carlotta","last_name":"Keunecke","full_name":"Keunecke, Carlotta"},{"first_name":"Joanna","last_name":"Baum","full_name":"Baum, Joanna"},{"last_name":"Angelotti","full_name":"Angelotti, Timothy","first_name":"Timothy"},{"first_name":"Jalid","full_name":"Sehouli, Jalid","last_name":"Sehouli"},{"first_name":"Elena Ioana","last_name":"Braicu","full_name":"Braicu, Elena Ioana"}],"date_created":"2023-01-16T09:44:36Z","related_material":{"record":[{"status":"public","relation":"other","id":"12115"}]},"volume":30,"scopus_import":"1","doi":"10.1245/s10434-022-12459-3","intvolume":"        30","oa_version":"Published Version","status":"public","_id":"12205","ddc":["610"],"file_date_updated":"2023-02-02T13:01:20Z","oa":1,"month":"01","page":"35-45","keyword":["Oncology","Surgery"],"language":[{"iso":"eng"}],"year":"2023","has_accepted_license":"1","article_processing_charge":"No","department":[{"_id":"JoDa"}],"article_type":"original","publisher":"Springer Nature","day":"01","quality_controlled":"1","abstract":[{"lang":"eng","text":"Background: This study seeks to evaluate the impact of breast cancer (BRCA) gene status on tumor dissemination pattern, surgical outcome and survival in a multicenter cohort of paired primary ovarian cancer (pOC) and recurrent ovarian cancer (rOC).\r\n\r\nPatients and Methods: Medical records and follow-up data from 190 patients were gathered retrospectively. All patients had surgery at pOC and at least one further rOC surgery at four European high-volume centers. Patients were divided into one cohort with confirmed mutation for BRCA1 and/or BRCA2 (BRCAmut) and a second cohort with BRCA wild type or unknown (BRCAwt). Patterns of tumor presentation, surgical outcome and survival data were analyzed between the two groups.\r\n\r\nResults: Patients with BRCAmut disease were on average 4 years younger and had significantly more tumor involvement upon diagnosis. Patients with BRCAmut disease showed higher debulking rates at all stages. Multivariate analysis showed that only patient age had significant predictive value for complete tumor resection in pOC. At rOC, however, only BRCAmut status significantly correlated with optimal debulking. Patients with BRCAmut disease showed significantly prolonged overall survival (OS) by 24.3 months. Progression-free survival (PFS) was prolonged in the BRCAmut group at all stages as well, reaching statistical significance during recurrence.\r\n\r\nConclusions: Patients with BRCAmut disease showed a more aggressive course of disease with earlier onset and more extensive tumor dissemination at pOC. However, surgical outcome and OS were significantly better in patients with BRCAmut disease compared with patients with BRCAwt disease. We therefore propose to consider BRCAmut status in regard to patient selection for cytoreductive surgery, especially in rOC."}],"date_updated":"2025-04-23T08:43:44Z","publication_status":"published","title":"Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome and patient survival in primary and recurrent high-grade serous ovarian cancer: A multicenter retrospective study by the Ovarian Cancer Therapy-Innovative Models Prolong Survival (OCTIPS) consortium","date_published":"2023-01-01T00:00:00Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"external_id":{"pmid":["36085390"],"isi":["000852125500006"]},"isi":1,"publication_identifier":{"issn":["1068-9265"],"eissn":["1534-4681"]},"publication":"Annals of Surgical Oncology","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"ieee":"J. Glajzer <i>et al.</i>, “Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome and patient survival in primary and recurrent high-grade serous ovarian cancer: A multicenter retrospective study by the Ovarian Cancer Therapy-Innovative Models Prolong Survival (OCTIPS) consortium,” <i>Annals of Surgical Oncology</i>, vol. 30. Springer Nature, pp. 35–45, 2023.","ama":"Glajzer J, Castillo-Tong DC, Richter R, et al. Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome and patient survival in primary and recurrent high-grade serous ovarian cancer: A multicenter retrospective study by the Ovarian Cancer Therapy-Innovative Models Prolong Survival (OCTIPS) consortium. <i>Annals of Surgical Oncology</i>. 2023;30:35-45. doi:<a href=\"https://doi.org/10.1245/s10434-022-12459-3\">10.1245/s10434-022-12459-3</a>","ista":"Glajzer J, Castillo-Tong DC, Richter R, Vergote I, Kulbe H, Vanderstichele A, Ruscito I, Trillsch F, Mustea A, Kreuzinger C, Gourley C, Gabra H, Taube ET, Dorigo O, Horst D, Keunecke C, Baum J, Angelotti T, Sehouli J, Braicu EI. 2023. Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome and patient survival in primary and recurrent high-grade serous ovarian cancer: A multicenter retrospective study by the Ovarian Cancer Therapy-Innovative Models Prolong Survival (OCTIPS) consortium. Annals of Surgical Oncology. 30, 35–45.","mla":"Glajzer, Jacek, et al. “Impact of BRCA Mutation Status on Tumor Dissemination Pattern, Surgical Outcome and Patient Survival in Primary and Recurrent High-Grade Serous Ovarian Cancer: A Multicenter Retrospective Study by the Ovarian Cancer Therapy-Innovative Models Prolong Survival (OCTIPS) Consortium.” <i>Annals of Surgical Oncology</i>, vol. 30, Springer Nature, 2023, pp. 35–45, doi:<a href=\"https://doi.org/10.1245/s10434-022-12459-3\">10.1245/s10434-022-12459-3</a>.","apa":"Glajzer, J., Castillo-Tong, D. C., Richter, R., Vergote, I., Kulbe, H., Vanderstichele, A., … Braicu, E. I. (2023). Impact of BRCA mutation status on tumor dissemination pattern, surgical outcome and patient survival in primary and recurrent high-grade serous ovarian cancer: A multicenter retrospective study by the Ovarian Cancer Therapy-Innovative Models Prolong Survival (OCTIPS) consortium. <i>Annals of Surgical Oncology</i>. Springer Nature. <a href=\"https://doi.org/10.1245/s10434-022-12459-3\">https://doi.org/10.1245/s10434-022-12459-3</a>","chicago":"Glajzer, Jacek, Dan Cacsire Castillo-Tong, Rolf Richter, Ignace Vergote, Hagen Kulbe, Adriaan Vanderstichele, Ilary Ruscito, et al. “Impact of BRCA Mutation Status on Tumor Dissemination Pattern, Surgical Outcome and Patient Survival in Primary and Recurrent High-Grade Serous Ovarian Cancer: A Multicenter Retrospective Study by the Ovarian Cancer Therapy-Innovative Models Prolong Survival (OCTIPS) Consortium.” <i>Annals of Surgical Oncology</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1245/s10434-022-12459-3\">https://doi.org/10.1245/s10434-022-12459-3</a>.","short":"J. Glajzer, D.C. Castillo-Tong, R. Richter, I. Vergote, H. Kulbe, A. Vanderstichele, I. Ruscito, F. Trillsch, A. Mustea, C. Kreuzinger, C. Gourley, H. Gabra, E.T. Taube, O. Dorigo, D. Horst, C. Keunecke, J. Baum, T. Angelotti, J. Sehouli, E.I. Braicu, Annals of Surgical Oncology 30 (2023) 35–45."},"pmid":1,"type":"journal_article","acknowledgement":"E.I.B. is a Feodor Lynen fellow of the Humboldt Foundation and a participant of the Charité Clinical Scientist Program funded by the Charité Universitätsmedizin Berlin and the Berlin Institute of Health. This work was supported by European Commission’s Seventh Framework Programme under grant agreement no. 279113 (OCTIPS; www.octips.eu).\r\nOpen Access funding enabled and organized by Projekt DEAL.","file":[{"creator":"dernst","access_level":"open_access","date_updated":"2023-02-02T13:01:20Z","success":1,"file_name":"2023_AnnalsSurgicalOncology_Glajzer.pdf","date_created":"2023-02-02T13:01:20Z","checksum":"36a1200e1011f4b2155a8041d0308f34","relation":"main_file","content_type":"application/pdf","file_size":365865,"file_id":"12490"}]},{"department":[{"_id":"LiBu"}],"has_accepted_license":"1","article_processing_charge":"Yes","issue":"2","day":"01","article_type":"original","publisher":"American Astronomical Society","keyword":["Space and Planetary Science","Astronomy and Astrophysics"],"language":[{"iso":"eng"}],"year":"2023","article_number":"131","status":"public","oa_version":"Published Version","_id":"13443","ddc":["520"],"file_date_updated":"2023-08-02T07:42:26Z","month":"08","oa":1,"date_created":"2023-08-01T14:19:16Z","volume":952,"author":[{"full_name":"Mathur, Savita","last_name":"Mathur","first_name":"Savita"},{"first_name":"Zachary R.","full_name":"Claytor, Zachary R.","last_name":"Claytor"},{"full_name":"Santos, Ângela R. G.","last_name":"Santos","first_name":"Ângela R. G."},{"first_name":"Rafael A.","last_name":"García","full_name":"García, Rafael A."},{"first_name":"Louis","last_name":"Amard","full_name":"Amard, Louis"},{"first_name":"Lisa Annabelle","id":"d9edb345-f866-11ec-9b37-d119b5234501","orcid":"0000-0003-0142-4000","last_name":"Bugnet","full_name":"Bugnet, Lisa Annabelle"},{"first_name":"Enrico","full_name":"Corsaro, Enrico","last_name":"Corsaro"},{"full_name":"Bonanno, Alfio","last_name":"Bonanno","first_name":"Alfio"},{"full_name":"Breton, Sylvain N.","last_name":"Breton","first_name":"Sylvain N."},{"full_name":"Godoy-Rivera, Diego","last_name":"Godoy-Rivera","first_name":"Diego"},{"first_name":"Marc H.","full_name":"Pinsonneault, Marc H.","last_name":"Pinsonneault"},{"first_name":"Jennifer","full_name":"van Saders, Jennifer","last_name":"van Saders"}],"intvolume":"       952","scopus_import":"1","doi":"10.3847/1538-4357/acd118","type":"journal_article","acknowledgement":"This paper includes data collected by the Kepler mission and obtained from the MAST data archive at the Space Telescope Science Institute (STScI). Funding for the Kepler mission is provided by the NASA Science Mission Directorate. STScI is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5–26555. We acknowledge that this research was supported in part by the National Science Foundation under grant No. NSF PHY-1748958. S.M. acknowledges support from the Spanish Ministry of Science and Innovation (MICINN) with the Ramón y Cajal fellowship No. RYC-2015-17697, the grant No. PID2019-107061GB-C66, and through AEI under the Severo Ochoa Centres of Excellence Programme 2020–2023 (CEX2019-000920-S). S.M. and D.G.R. acknowledge support from the Spanish Ministry of Science and Innovation (MICINN) with the grant No. PID2019-107187GB-I00. Z.R.C. acknowledges support from National Aeronautics and Space Administration via the TESS Guest Investigator Program (grant No. 80NSSC18K18584). The work presented here was partially supported by the NASA grant NNX17AF27G. A.R.G.S. acknowledges the support by FCT through national funds and by FEDER through COMPETE2020 by the following grants: UIDB/04434/2020 and UIDP/04434/2020. A.R.G.S. is supported by FCT through the work contract No. 2020.02480.CEECIND/CP1631/CT0001. R.A.G., L.A., and S.N.B. acknowledge the support from PLATO and GOLF CNES grants. S.N.B. acknowledges support from PLATO ASI-INAF agreement No. 2015-019-R.1-2018.","file":[{"file_name":"2023_AstrophysicalJour_Mathur.pdf","date_created":"2023-08-02T07:42:26Z","success":1,"date_updated":"2023-08-02T07:42:26Z","creator":"dernst","access_level":"open_access","file_id":"13448","file_size":4192386,"relation":"main_file","content_type":"application/pdf","checksum":"f12452834d7ed6748dbf5ace18af4723"}],"publication":"The Astrophysical Journal","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"short":"S. Mathur, Z.R. Claytor, Â.R.G. Santos, R.A. García, L. Amard, L.A. Bugnet, E. Corsaro, A. Bonanno, S.N. Breton, D. Godoy-Rivera, M.H. Pinsonneault, J. van Saders, The Astrophysical Journal 952 (2023).","chicago":"Mathur, Savita, Zachary R. Claytor, Ângela R. G. Santos, Rafael A. García, Louis Amard, Lisa Annabelle Bugnet, Enrico Corsaro, et al. “Magnetic Activity Evolution of Solar-like Stars. I. Sph–Age Relation Derived from Kepler Observations.” <i>The Astrophysical Journal</i>. American Astronomical Society, 2023. <a href=\"https://doi.org/10.3847/1538-4357/acd118\">https://doi.org/10.3847/1538-4357/acd118</a>.","apa":"Mathur, S., Claytor, Z. R., Santos, Â. R. G., García, R. A., Amard, L., Bugnet, L. A., … van Saders, J. (2023). Magnetic activity evolution of solar-like stars. I. Sph–age relation derived from Kepler observations. <i>The Astrophysical Journal</i>. American Astronomical Society. <a href=\"https://doi.org/10.3847/1538-4357/acd118\">https://doi.org/10.3847/1538-4357/acd118</a>","ista":"Mathur S, Claytor ZR, Santos ÂRG, García RA, Amard L, Bugnet LA, Corsaro E, Bonanno A, Breton SN, Godoy-Rivera D, Pinsonneault MH, van Saders J. 2023. Magnetic activity evolution of solar-like stars. I. Sph–age relation derived from Kepler observations. The Astrophysical Journal. 952(2), 131.","mla":"Mathur, Savita, et al. “Magnetic Activity Evolution of Solar-like Stars. I. Sph–Age Relation Derived from Kepler Observations.” <i>The Astrophysical Journal</i>, vol. 952, no. 2, 131, American Astronomical Society, 2023, doi:<a href=\"https://doi.org/10.3847/1538-4357/acd118\">10.3847/1538-4357/acd118</a>.","ieee":"S. Mathur <i>et al.</i>, “Magnetic activity evolution of solar-like stars. I. Sph–age relation derived from Kepler observations,” <i>The Astrophysical Journal</i>, vol. 952, no. 2. American Astronomical Society, 2023.","ama":"Mathur S, Claytor ZR, Santos ÂRG, et al. Magnetic activity evolution of solar-like stars. I. Sph–age relation derived from Kepler observations. <i>The Astrophysical Journal</i>. 2023;952(2). doi:<a href=\"https://doi.org/10.3847/1538-4357/acd118\">10.3847/1538-4357/acd118</a>"},"publication_identifier":{"eissn":["1538-4357"],"issn":["0004-637X"]},"abstract":[{"lang":"eng","text":"The ages of solar-like stars have been at the center of many studies such as exoplanet characterization or Galactic-archeology. While ages are usually computed from stellar evolution models, relations linking ages to other stellar properties, such as rotation and magnetic activity, have been investigated. With the large catalog of 55,232 rotation periods, Prot, and photometric magnetic activity index, Sph from Kepler data, we have the opportunity to look for such magneto-gyro-chronology relations. Stellar ages are obtained with two stellar evolution codes that include treatment of angular momentum evolution, hence using Prot as input in addition to classical atmospheric parameters. We explore two different ways of predicting stellar ages on three subsamples with spectroscopic observations: solar analogs, late-F and G dwarfs, and K dwarfs. We first perform a Bayesian analysis to derive relations between Sph and ages between 1 and 5 Gyr, and other stellar properties. For late-F and G dwarfs, and K dwarfs, the multivariate regression favors the model with Prot and Sph with median differences of 0.1% and 0.2%, respectively. We also apply Machine Learning techniques with a Random Forest algorithm to predict ages up to 14 Gyr with the same set of input parameters. For late-F, G and K dwarfs together, predicted ages are on average within 5.3% of the model ages and improve to 3.1% when including Prot. These are very promising results for a quick age estimation for solar-like stars with photometric observations, especially with current and future space missions."}],"quality_controlled":"1","date_published":"2023-08-01T00:00:00Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"external_id":{"isi":["001034185700001"]},"isi":1,"date_updated":"2024-10-21T06:01:32Z","title":"Magnetic activity evolution of solar-like stars. I. Sph–age relation derived from Kepler observations","publication_status":"published"},{"department":[{"_id":"LiBu"}],"type":"preprint","article_processing_charge":"No","day":"06","publication":"arXiv","language":[{"iso":"eng"}],"year":"2023","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"mla":"Huber, Daniel, et al. “Asteroseismology with the Roman Galactic Bulge Time-Domain Survey.” <i>ArXiv</i>, 2307.03237, doi:<a href=\"https://doi.org/10.48550/arXiv.2307.03237\">10.48550/arXiv.2307.03237</a>.","ista":"Huber D, Pinsonneault M, Beck P, Bedding TR, Joss Bland-Hawthorn JB-H, Breton SN, Bugnet LA, Chaplin WJ, Garcia RA, Grunblatt SK, Guzik JA, Hekker S, Kawaler SD, Mathis S, Mathur S, Metcalfe T, Mosser B, Ness MK, Piro AL, Serenelli A, Sharma S, Soderblom DR, Stassun KG, Stello D, Tayar J, Belle GT van, Zinn JC. Asteroseismology with the Roman galactic bulge time-domain survey. arXiv, 2307.03237.","ieee":"D. Huber <i>et al.</i>, “Asteroseismology with the Roman galactic bulge time-domain survey,” <i>arXiv</i>. .","ama":"Huber D, Pinsonneault M, Beck P, et al. Asteroseismology with the Roman galactic bulge time-domain survey. <i>arXiv</i>. doi:<a href=\"https://doi.org/10.48550/arXiv.2307.03237\">10.48550/arXiv.2307.03237</a>","short":"D. Huber, M. Pinsonneault, P. Beck, T.R. Bedding, J.B.-H. Joss Bland-Hawthorn, S.N. Breton, L.A. Bugnet, W.J. Chaplin, R.A. Garcia, S.K. Grunblatt, J.A. Guzik, S. Hekker, S.D. Kawaler, S. Mathis, S. Mathur, T. Metcalfe, B. Mosser, M.K. Ness, A.L. Piro, A. Serenelli, S. Sharma, D.R. Soderblom, K.G. Stassun, D. Stello, J. Tayar, G.T. van Belle, J.C. Zinn, ArXiv (n.d.).","apa":"Huber, D., Pinsonneault, M., Beck, P., Bedding, T. R., Joss Bland-Hawthorn, J. B.-H., Breton, S. N., … Zinn, J. C. (n.d.). Asteroseismology with the Roman galactic bulge time-domain survey. <i>arXiv</i>. <a href=\"https://doi.org/10.48550/arXiv.2307.03237\">https://doi.org/10.48550/arXiv.2307.03237</a>","chicago":"Huber, Daniel, Marc Pinsonneault, Paul Beck, Timothy R. Bedding, Joss Bland-Hawthorn Joss Bland-Hawthorn, Sylvain N. Breton, Lisa Annabelle Bugnet, et al. “Asteroseismology with the Roman Galactic Bulge Time-Domain Survey.” <i>ArXiv</i>, n.d. <a href=\"https://doi.org/10.48550/arXiv.2307.03237\">https://doi.org/10.48550/arXiv.2307.03237</a>."},"article_number":"2307.03237","oa_version":"Preprint","status":"public","arxiv":1,"_id":"13447","month":"07","oa":1,"date_created":"2023-08-02T07:30:43Z","abstract":[{"lang":"eng","text":"Asteroseismology has transformed stellar astrophysics. Red giant asteroseismology is a prime example, with oscillation periods and amplitudes that are readily detectable with time-domain space-based telescopes. These oscillations can be used to infer masses, ages and radii for large numbers of stars, providing unique constraints on stellar populations in our galaxy. The cadence, duration, and spatial resolution of the Roman galactic bulge time-domain survey (GBTDS) are well-suited for asteroseismology and will probe an important population not studied by prior missions. We identify photometric precision as a key requirement for realizing the potential of asteroseismology with Roman. A precision of 1 mmag per 15-min cadence or better for saturated stars will enable detections of the populous red clump star population in the Galactic bulge. If the survey efficiency is better than expected, we argue for repeat observations of the same fields to improve photometric precision, or covering additional fields to expand the stellar population reach if the photometric precision for saturated stars is better than 1 mmag. Asteroseismology is relatively insensitive to the timing of the observations during the mission, and the prime red clump targets can be observed in a single 70 day campaign in any given field. Complementary stellar characterization, particularly astrometry tied to the Gaia system, will also dramatically expand the diagnostic power of asteroseismology. We also highlight synergies to Roman GBTDS exoplanet science using transits and microlensing."}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2307.03237"}],"author":[{"full_name":"Huber, Daniel","last_name":"Huber","first_name":"Daniel"},{"full_name":"Pinsonneault, Marc","last_name":"Pinsonneault","first_name":"Marc"},{"first_name":"Paul","last_name":"Beck","full_name":"Beck, Paul"},{"first_name":"Timothy R.","last_name":"Bedding","full_name":"Bedding, Timothy R."},{"last_name":"Joss Bland-Hawthorn","full_name":"Joss Bland-Hawthorn, Joss Bland-Hawthorn","first_name":"Joss Bland-Hawthorn"},{"first_name":"Sylvain N.","last_name":"Breton","full_name":"Breton, Sylvain N."},{"last_name":"Bugnet","full_name":"Bugnet, Lisa Annabelle","orcid":"0000-0003-0142-4000","id":"d9edb345-f866-11ec-9b37-d119b5234501","first_name":"Lisa Annabelle"},{"first_name":"William J.","last_name":"Chaplin","full_name":"Chaplin, William J."},{"full_name":"Garcia, Rafael A.","last_name":"Garcia","first_name":"Rafael A."},{"last_name":"Grunblatt","full_name":"Grunblatt, Samuel K.","first_name":"Samuel K."},{"last_name":"Guzik","full_name":"Guzik, Joyce A.","first_name":"Joyce A."},{"full_name":"Hekker, Saskia","last_name":"Hekker","first_name":"Saskia"},{"last_name":"Kawaler","full_name":"Kawaler, Steven D.","first_name":"Steven D."},{"last_name":"Mathis","full_name":"Mathis, Stephane","first_name":"Stephane"},{"full_name":"Mathur, Savita","last_name":"Mathur","first_name":"Savita"},{"full_name":"Metcalfe, Travis","last_name":"Metcalfe","first_name":"Travis"},{"last_name":"Mosser","full_name":"Mosser, Benoit","first_name":"Benoit"},{"last_name":"Ness","full_name":"Ness, Melissa K.","first_name":"Melissa K."},{"first_name":"Anthony L.","last_name":"Piro","full_name":"Piro, Anthony L."},{"full_name":"Serenelli, Aldo","last_name":"Serenelli","first_name":"Aldo"},{"full_name":"Sharma, Sanjib","last_name":"Sharma","first_name":"Sanjib"},{"first_name":"David R.","last_name":"Soderblom","full_name":"Soderblom, David R."},{"last_name":"Stassun","full_name":"Stassun, Keivan G.","first_name":"Keivan G."},{"full_name":"Stello, Dennis","last_name":"Stello","first_name":"Dennis"},{"last_name":"Tayar","full_name":"Tayar, Jamie","first_name":"Jamie"},{"last_name":"Belle","full_name":"Belle, Gerard T. van","first_name":"Gerard T. van"},{"last_name":"Zinn","full_name":"Zinn, Joel C.","first_name":"Joel C."}],"date_published":"2023-07-06T00:00:00Z","external_id":{"arxiv":["2307.03237"]},"date_updated":"2023-08-02T07:36:00Z","doi":"10.48550/arXiv.2307.03237","title":"Asteroseismology with the Roman galactic bulge time-domain survey","publication_status":"submitted"},{"oa":1,"month":"08","ddc":["530"],"_id":"13963","file_date_updated":"2023-08-07T09:48:08Z","status":"public","oa_version":"Published Version","article_number":"054201","doi":"10.1103/physrevb.108.054201","scopus_import":"1","intvolume":"       108","author":[{"first_name":"Pietro","id":"4115AF5C-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-7969-2729","full_name":"Brighi, Pietro","last_name":"Brighi"},{"orcid":"0000-0003-0038-7068","full_name":"Ljubotina, Marko","last_name":"Ljubotina","first_name":"Marko","id":"F75EE9BE-5C90-11EA-905D-16643DDC885E"},{"full_name":"Abanin, Dmitry A.","last_name":"Abanin","first_name":"Dmitry A."},{"last_name":"Serbyn","full_name":"Serbyn, Maksym","orcid":"0000-0002-2399-5827","id":"47809E7E-F248-11E8-B48F-1D18A9856A87","first_name":"Maksym"}],"volume":108,"date_created":"2023-08-05T18:25:22Z","publisher":"American Physical Society","article_type":"original","day":"01","issue":"5","article_processing_charge":"Yes (in subscription journal)","has_accepted_license":"1","department":[{"_id":"MaSe"}],"year":"2023","language":[{"iso":"eng"}],"corr_author":"1","publication_identifier":{"issn":["2469-9950"],"eissn":["2469-9969"]},"arxiv":1,"ec_funded":1,"project":[{"name":"Non-Ergodic Quantum Matter: Universality, Dynamics and Control","_id":"23841C26-32DE-11EA-91FC-C7463DDC885E","call_identifier":"H2020","grant_number":"850899"}],"title":"Many-body localization proximity effect in a two-species bosonic Hubbard model","publication_status":"published","date_updated":"2025-04-14T07:52:06Z","date_published":"2023-08-01T00:00:00Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"external_id":{"arxiv":["2303.16876"]},"abstract":[{"text":"The many-body localization (MBL) proximity effect is an intriguing phenomenon where a thermal bath localizes due to the interaction with a disordered system. The interplay of thermal and nonergodic behavior in these systems gives rise to a rich phase diagram, whose exploration is an active field of research. In this paper, we study a bosonic Hubbard model featuring two particle species representing the bath and the disordered system. Using state-of-the-art numerical techniques, we investigate the dynamics of the model in different regimes, based on which we obtain a tentative phase diagram as a function of coupling strength and bath size. When the bath is composed of a single particle, we observe clear signatures of a transition from an MBL proximity effect to a delocalized phase. Increasing the bath size, however, its thermalizing effect becomes stronger and eventually the whole system delocalizes in the range of moderate interaction strengths studied. In this regime, we characterize particle transport, revealing diffusive behavior of the originally localized bosons.","lang":"eng"}],"quality_controlled":"1","file":[{"file_id":"13981","file_size":3051398,"relation":"main_file","content_type":"application/pdf","checksum":"f763000339b5fd543c14377109920690","file_name":"2023_PhysRevB_Brighi.pdf","date_created":"2023-08-07T09:48:08Z","date_updated":"2023-08-07T09:48:08Z","success":1,"access_level":"open_access","creator":"dernst"}],"acknowledgement":"We thank A. A. Michailidis and A. Mirlin for insightful discussions. P.B., M.L., and M.S. acknowledge support by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation program (Grant Agreement No. 850899). D.A. was\r\nsupported by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation program (Grant Agreement No. 864597) and by the Swiss National Science Foundation. P.B., M.L., and M.S. acknowledge PRACE for awarding us access to Joliot-Curie at GENCI@CEA, France, where the TEBD simulations were performed. The TEBD simulations were performed using the ITensor library [60].","type":"journal_article","citation":{"short":"P. Brighi, M. Ljubotina, D.A. Abanin, M. Serbyn, Physical Review B 108 (2023).","apa":"Brighi, P., Ljubotina, M., Abanin, D. A., &#38; Serbyn, M. (2023). Many-body localization proximity effect in a two-species bosonic Hubbard model. <i>Physical Review B</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevb.108.054201\">https://doi.org/10.1103/physrevb.108.054201</a>","chicago":"Brighi, Pietro, Marko Ljubotina, Dmitry A. Abanin, and Maksym Serbyn. “Many-Body Localization Proximity Effect in a Two-Species Bosonic Hubbard Model.” <i>Physical Review B</i>. American Physical Society, 2023. <a href=\"https://doi.org/10.1103/physrevb.108.054201\">https://doi.org/10.1103/physrevb.108.054201</a>.","mla":"Brighi, Pietro, et al. “Many-Body Localization Proximity Effect in a Two-Species Bosonic Hubbard Model.” <i>Physical Review B</i>, vol. 108, no. 5, 054201, American Physical Society, 2023, doi:<a href=\"https://doi.org/10.1103/physrevb.108.054201\">10.1103/physrevb.108.054201</a>.","ista":"Brighi P, Ljubotina M, Abanin DA, Serbyn M. 2023. Many-body localization proximity effect in a two-species bosonic Hubbard model. Physical Review B. 108(5), 054201.","ieee":"P. Brighi, M. Ljubotina, D. A. Abanin, and M. Serbyn, “Many-body localization proximity effect in a two-species bosonic Hubbard model,” <i>Physical Review B</i>, vol. 108, no. 5. American Physical Society, 2023.","ama":"Brighi P, Ljubotina M, Abanin DA, Serbyn M. Many-body localization proximity effect in a two-species bosonic Hubbard model. <i>Physical Review B</i>. 2023;108(5). doi:<a href=\"https://doi.org/10.1103/physrevb.108.054201\">10.1103/physrevb.108.054201</a>"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication":"Physical Review B"},{"publisher":"Elsevier","article_type":"original","day":"01","issue":"8","article_processing_charge":"Yes (via OA deal)","has_accepted_license":"1","department":[{"_id":"DaZi"}],"year":"2023","language":[{"iso":"eng"}],"oa":1,"month":"08","ddc":["570"],"_id":"13965","file_date_updated":"2023-08-07T08:32:26Z","status":"public","oa_version":"Published Version","article_number":"102087","doi":"10.1016/j.gde.2023.102087","scopus_import":"1","intvolume":"        81","author":[{"id":"b8c4f54b-e484-11eb-8fdc-a54df64ef6dd","first_name":"Elizabeth","full_name":"Hollwey, Elizabeth","last_name":"Hollwey"},{"full_name":"Briffa, Amy","last_name":"Briffa","first_name":"Amy"},{"first_name":"Martin","full_name":"Howard, Martin","last_name":"Howard"},{"first_name":"Daniel","id":"6973db13-dd5f-11ea-814e-b3e5455e9ed1","orcid":"0000-0002-0123-8649","full_name":"Zilberman, Daniel","last_name":"Zilberman"}],"volume":81,"date_created":"2023-08-06T22:01:10Z","file":[{"file_name":"2023_CurrentOpinionGenetics_Hollwey.pdf","date_created":"2023-08-07T08:32:26Z","date_updated":"2023-08-07T08:32:26Z","success":1,"access_level":"open_access","creator":"dernst","file_size":2568632,"file_id":"13980","relation":"main_file","content_type":"application/pdf","checksum":"a294cd9506b80ed6ef218ef44ed32765"}],"type":"journal_article","citation":{"ieee":"E. Hollwey, A. Briffa, M. Howard, and D. Zilberman, “Concepts, mechanisms and implications of long-term epigenetic inheritance,” <i>Current Opinion in Genetics and Development</i>, vol. 81, no. 8. Elsevier, 2023.","ama":"Hollwey E, Briffa A, Howard M, Zilberman D. Concepts, mechanisms and implications of long-term epigenetic inheritance. <i>Current Opinion in Genetics and Development</i>. 2023;81(8). doi:<a href=\"https://doi.org/10.1016/j.gde.2023.102087\">10.1016/j.gde.2023.102087</a>","mla":"Hollwey, Elizabeth, et al. “Concepts, Mechanisms and Implications of Long-Term Epigenetic Inheritance.” <i>Current Opinion in Genetics and Development</i>, vol. 81, no. 8, 102087, Elsevier, 2023, doi:<a href=\"https://doi.org/10.1016/j.gde.2023.102087\">10.1016/j.gde.2023.102087</a>.","ista":"Hollwey E, Briffa A, Howard M, Zilberman D. 2023. Concepts, mechanisms and implications of long-term epigenetic inheritance. Current Opinion in Genetics and Development. 81(8), 102087.","apa":"Hollwey, E., Briffa, A., Howard, M., &#38; Zilberman, D. (2023). Concepts, mechanisms and implications of long-term epigenetic inheritance. <i>Current Opinion in Genetics and Development</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.gde.2023.102087\">https://doi.org/10.1016/j.gde.2023.102087</a>","chicago":"Hollwey, Elizabeth, Amy Briffa, Martin Howard, and Daniel Zilberman. “Concepts, Mechanisms and Implications of Long-Term Epigenetic Inheritance.” <i>Current Opinion in Genetics and Development</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.gde.2023.102087\">https://doi.org/10.1016/j.gde.2023.102087</a>.","short":"E. Hollwey, A. Briffa, M. Howard, D. Zilberman, Current Opinion in Genetics and Development 81 (2023)."},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"publication":"Current Opinion in Genetics and Development","corr_author":"1","publication_identifier":{"issn":["0959-437X"],"eissn":["1879-0380"]},"title":"Concepts, mechanisms and implications of long-term epigenetic inheritance","date_updated":"2024-10-09T21:06:16Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"date_published":"2023-08-01T00:00:00Z","isi":1,"external_id":{"isi":["001047020200001"],"pmid":["37441873"]},"quality_controlled":"1","abstract":[{"lang":"eng","text":"Many modes and mechanisms of epigenetic inheritance have been elucidated in eukaryotes. Most of them are relatively short-term, generally not exceeding one or a few organismal generations. However, emerging evidence indicates that one mechanism, cytosine DNA methylation, can mediate epigenetic inheritance over much longer timescales, which are mostly or completely inaccessible in the laboratory. Here we discuss the evidence for, and mechanisms and implications of, such long-term epigenetic inheritance. We argue that compelling evidence supports the long-term epigenetic inheritance of gene body methylation, at least in the model angiosperm Arabidopsis thaliana, and that variation in such methylation can therefore serve as an epigenetic basis for phenotypic variation in natural populations."}]},{"type":"journal_article","acknowledgement":"We acknowledge stimulating discussions with Sergey Varganov, Artur Izmaylov, Jacek Kłos, Piotr Żuchowski, Dominika Zgid, Nikolay Prokof'ev, Boris Svistunov, Robert Parrish, and Andreas Heßelmann. G.B. and Q.P.H. acknowledge support from the Austrian Science Fund (FWF) under Projects No. M2641-N27 and No. M2751. M.L. acknowledges support by the FWF under Project No. P29902-N27, and by the European Research Council (ERC) Starting Grant No. 801770 (ANGULON). T.V.T. was supported by the NSF CAREER award No. PHY-2045681. This work is supported by the German Research Foundation (DFG) under Germany's Excellence Strategy EXC2181/1-390900948 (the Heidelberg STRUCTURES Excellence Cluster). The authors acknowledge support by the state of Baden-Württemberg through bwHPC.","publication":"Physical Review B","citation":{"apa":"Bighin, G., Ho, Q. P., Lemeshko, M., &#38; Tscherbul, T. V. (2023). Diagrammatic Monte Carlo for electronic correlation in molecules: High-order many-body perturbation theory with low scaling. <i>Physical Review B</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevB.108.045115\">https://doi.org/10.1103/PhysRevB.108.045115</a>","chicago":"Bighin, Giacomo, Quoc P Ho, Mikhail Lemeshko, and T. V. Tscherbul. “Diagrammatic Monte Carlo for Electronic Correlation in Molecules: High-Order Many-Body Perturbation Theory with Low Scaling.” <i>Physical Review B</i>. American Physical Society, 2023. <a href=\"https://doi.org/10.1103/PhysRevB.108.045115\">https://doi.org/10.1103/PhysRevB.108.045115</a>.","short":"G. Bighin, Q.P. Ho, M. Lemeshko, T.V. Tscherbul, Physical Review B 108 (2023).","ieee":"G. Bighin, Q. P. Ho, M. Lemeshko, and T. V. Tscherbul, “Diagrammatic Monte Carlo for electronic correlation in molecules: High-order many-body perturbation theory with low scaling,” <i>Physical Review B</i>, vol. 108, no. 4. American Physical Society, 2023.","ama":"Bighin G, Ho QP, Lemeshko M, Tscherbul TV. Diagrammatic Monte Carlo for electronic correlation in molecules: High-order many-body perturbation theory with low scaling. <i>Physical Review B</i>. 2023;108(4). doi:<a href=\"https://doi.org/10.1103/PhysRevB.108.045115\">10.1103/PhysRevB.108.045115</a>","mla":"Bighin, Giacomo, et al. “Diagrammatic Monte Carlo for Electronic Correlation in Molecules: High-Order Many-Body Perturbation Theory with Low Scaling.” <i>Physical Review B</i>, vol. 108, no. 4, 045115, American Physical Society, 2023, doi:<a href=\"https://doi.org/10.1103/PhysRevB.108.045115\">10.1103/PhysRevB.108.045115</a>.","ista":"Bighin G, Ho QP, Lemeshko M, Tscherbul TV. 2023. Diagrammatic Monte Carlo for electronic correlation in molecules: High-order many-body perturbation theory with low scaling. Physical Review B. 108(4), 045115."},"user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","arxiv":1,"ec_funded":1,"corr_author":"1","publication_identifier":{"issn":["2469-9950"],"eissn":["2469-9969"]},"quality_controlled":"1","abstract":[{"text":"We present a low-scaling diagrammatic Monte Carlo approach to molecular correlation energies. Using combinatorial graph theory to encode many-body Hugenholtz diagrams, we sample the Møller-Plesset (MPn) perturbation series, obtaining accurate correlation energies up to n=5, with quadratic scaling in the number of basis functions. Our technique reduces the computational complexity of the molecular many-fermion correlation problem, opening up the possibility of low-scaling, accurate stochastic computations for a wide class of many-body systems described by Hugenholtz diagrams.","lang":"eng"}],"date_published":"2023-07-15T00:00:00Z","isi":1,"external_id":{"isi":["001532067800001"],"arxiv":["2203.12666"]},"title":"Diagrammatic Monte Carlo for electronic correlation in molecules: High-order many-body perturbation theory with low scaling","publication_status":"published","project":[{"grant_number":"M02641","call_identifier":"FWF","name":"A path-integral approach to composite impurities","_id":"26986C82-B435-11E9-9278-68D0E5697425"},{"call_identifier":"FWF","name":"Algebro-Geometric Applications of Factorization Homology","_id":"26B96266-B435-11E9-9278-68D0E5697425","grant_number":"M02751"},{"name":"Quantum rotations in the presence of a many-body environment","_id":"26031614-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"P29902"},{"grant_number":"801770","name":"Angulon: physics and applications of a new quasiparticle","_id":"2688CF98-B435-11E9-9278-68D0E5697425","call_identifier":"H2020"}],"date_updated":"2025-09-09T12:45:32Z","department":[{"_id":"MiLe"},{"_id":"TaHa"}],"article_processing_charge":"No","issue":"4","day":"15","publisher":"American Physical Society","article_type":"original","year":"2023","language":[{"iso":"eng"}],"article_number":"045115","_id":"13966","oa_version":"Preprint","status":"public","month":"07","oa":1,"volume":108,"date_created":"2023-08-06T22:01:10Z","author":[{"id":"4CA96FD4-F248-11E8-B48F-1D18A9856A87","first_name":"Giacomo","last_name":"Bighin","full_name":"Bighin, Giacomo","orcid":"0000-0001-8823-9777"},{"id":"3DD82E3C-F248-11E8-B48F-1D18A9856A87","first_name":"Quoc P","last_name":"Ho","full_name":"Ho, Quoc P","orcid":"0000-0001-6889-1418"},{"last_name":"Lemeshko","full_name":"Lemeshko, Mikhail","orcid":"0000-0002-6990-7802","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","first_name":"Mikhail"},{"first_name":"T. V.","full_name":"Tscherbul, T. V.","last_name":"Tscherbul"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2203.12666"}],"intvolume":"       108","doi":"10.1103/PhysRevB.108.045115","scopus_import":"1"},{"year":"2023","language":[{"iso":"eng"}],"department":[{"_id":"KrCh"}],"article_processing_charge":"No","day":"01","publisher":"Institute of Electrical and Electronics Engineers","volume":2023,"date_created":"2023-08-06T22:01:10Z","author":[{"last_name":"Kretinsky","full_name":"Kretinsky, Jan","orcid":"0000-0002-8122-2881","id":"44CEF464-F248-11E8-B48F-1D18A9856A87","first_name":"Jan"},{"id":"b21b0c15-30a2-11eb-80dc-f13ca25802e1","first_name":"Tobias","last_name":"Meggendorfer","full_name":"Meggendorfer, Tobias","orcid":"0000-0002-1712-2165"},{"id":"02ab0197-cc70-11ed-ab61-918e71f56881","first_name":"Maximilian","last_name":"Weininger","full_name":"Weininger, Maximilian"}],"main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2304.09930"}],"intvolume":"      2023","doi":"10.1109/LICS56636.2023.10175771","scopus_import":"1","_id":"13967","status":"public","oa_version":"Preprint","month":"07","oa":1,"publication":"38th Annual ACM/IEEE Symposium on Logic in Computer Science","citation":{"ieee":"J. Kretinsky, T. Meggendorfer, and M. Weininger, “Stopping criteria for value iteration on stochastic games with quantitative objectives,” in <i>38th Annual ACM/IEEE Symposium on Logic in Computer Science</i>, Boston, MA, United States, 2023, vol. 2023.","ama":"Kretinsky J, Meggendorfer T, Weininger M. Stopping criteria for value iteration on stochastic games with quantitative objectives. In: <i>38th Annual ACM/IEEE Symposium on Logic in Computer Science</i>. Vol 2023. Institute of Electrical and Electronics Engineers; 2023. doi:<a href=\"https://doi.org/10.1109/LICS56636.2023.10175771\">10.1109/LICS56636.2023.10175771</a>","mla":"Kretinsky, Jan, et al. “Stopping Criteria for Value Iteration on Stochastic Games with Quantitative Objectives.” <i>38th Annual ACM/IEEE Symposium on Logic in Computer Science</i>, vol. 2023, Institute of Electrical and Electronics Engineers, 2023, doi:<a href=\"https://doi.org/10.1109/LICS56636.2023.10175771\">10.1109/LICS56636.2023.10175771</a>.","ista":"Kretinsky J, Meggendorfer T, Weininger M. 2023. Stopping criteria for value iteration on stochastic games with quantitative objectives. 38th Annual ACM/IEEE Symposium on Logic in Computer Science. LICS: Logic in Computer Science vol. 2023.","chicago":"Kretinsky, Jan, Tobias Meggendorfer, and Maximilian Weininger. “Stopping Criteria for Value Iteration on Stochastic Games with Quantitative Objectives.” In <i>38th Annual ACM/IEEE Symposium on Logic in Computer Science</i>, Vol. 2023. Institute of Electrical and Electronics Engineers, 2023. <a href=\"https://doi.org/10.1109/LICS56636.2023.10175771\">https://doi.org/10.1109/LICS56636.2023.10175771</a>.","apa":"Kretinsky, J., Meggendorfer, T., &#38; Weininger, M. (2023). Stopping criteria for value iteration on stochastic games with quantitative objectives. In <i>38th Annual ACM/IEEE Symposium on Logic in Computer Science</i> (Vol. 2023). Boston, MA, United States: Institute of Electrical and Electronics Engineers. <a href=\"https://doi.org/10.1109/LICS56636.2023.10175771\">https://doi.org/10.1109/LICS56636.2023.10175771</a>","short":"J. Kretinsky, T. Meggendorfer, M. Weininger, in:, 38th Annual ACM/IEEE Symposium on Logic in Computer Science, Institute of Electrical and Electronics Engineers, 2023."},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","conference":{"location":"Boston, MA, United States","start_date":"2023-06-26","end_date":"2023-06-29","name":"LICS: Logic in Computer Science"},"type":"conference","acknowledgement":"This research was funded in part by DFG projects 383882557 “SUV” and 427755713 “GOPro”.","abstract":[{"lang":"eng","text":"A classic solution technique for Markov decision processes (MDP) and stochastic games (SG) is value iteration (VI). Due to its good practical performance, this approximative approach is typically preferred over exact techniques, even though no practical bounds on the imprecision of the result could be given until recently. As a consequence, even the most used model checkers could return arbitrarily wrong results. Over the past decade, different works derived stopping criteria, indicating when the precision reaches the desired level, for various settings, in particular MDP with reachability, total reward, and mean payoff, and SG with reachability.In this paper, we provide the first stopping criteria for VI on SG with total reward and mean payoff, yielding the first anytime algorithms in these settings. To this end, we provide the solution in two flavours: First through a reduction to the MDP case and second directly on SG. The former is simpler and automatically utilizes any advances on MDP. The latter allows for more local computations, heading towards better practical efficiency.Our solution unifies the previously mentioned approaches for MDP and SG and their underlying ideas. To achieve this, we isolate objective-specific subroutines as well as identify objective-independent concepts. These structural concepts, while surprisingly simple, form the very essence of the unified solution."}],"quality_controlled":"1","date_published":"2023-07-01T00:00:00Z","isi":1,"external_id":{"arxiv":["2304.09930"],"isi":["001036707700042"]},"title":"Stopping criteria for value iteration on stochastic games with quantitative objectives","publication_status":"published","date_updated":"2025-07-10T11:50:43Z","arxiv":1,"corr_author":"1","publication_identifier":{"isbn":["9798350335873"],"issn":["1043-6871"]}},{"publication_identifier":{"eissn":["2296-424X"]},"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"isi":1,"external_id":{"isi":["001038636400001"]},"date_published":"2023-07-14T00:00:00Z","date_updated":"2025-03-11T08:00:41Z","publication_status":"published","title":"Optical and electronic signal stabilization of plasmonic fiber optic gate electrodes: Towards improved real-time dual-mode biosensing","quality_controlled":"1","abstract":[{"lang":"eng","text":"The use of multimodal readout mechanisms next to label-free real-time monitoring of biomolecular interactions can provide valuable insight into surface-based reaction mechanisms. To this end, the combination of an electrolyte-gated field-effect transistor (EG-FET) with a fiber optic-coupled surface plasmon resonance (FO-SPR) probe serving as gate electrode has been investigated to deconvolute surface mass and charge density variations associated to surface reactions. However, applying an electrochemical potential on such gold-coated FO-SPR gate electrodes can induce gradual morphological changes of the thin gold film, leading to an irreversible blue-shift of the SPR wavelength and a substantial signal drift. We show that mild annealing leads to optical and electronic signal stabilization (20-fold lower signal drift than as-sputtered fiber optic gates) and improved overall analytical performance characteristics. The thermal treatment prevents morphological changes of the thin gold-film occurring during operation, hence providing reliable and stable data immediately upon gate voltage application. Thus, the readout output of both transducing principles, the optical FO-SPR and electronic EG-FET, stays constant throughout the whole sensing time-window and the long-term effect of thermal treatment is also improved, providing stable signals even after 1 year of storage. Annealing should therefore be considered a necessary modification for applying fiber optic gate electrodes in real-time multimodal investigations of surface reactions at the solid-liquid interface."}],"file":[{"date_updated":"2023-08-07T07:48:11Z","success":1,"creator":"dernst","access_level":"open_access","file_name":"2023_FrontiersPhysics_Hasler.pdf","date_created":"2023-08-07T07:48:11Z","relation":"main_file","content_type":"application/pdf","checksum":"fb36dda665e57bab006a000bf0faacd5","file_size":2421758,"file_id":"13978"}],"type":"journal_article","acknowledgement":"This project has received funding from the European Union’s Horizon 2020 Research and Innovation Programme under the Marie Skłodowska-Curie grant agreement No. 813863–BORGES. We further thank the office of the Federal Government of Lower Austria, K3-Group–Culture, Science and Education, for their financial support as part of the project “Responsive Wound Dressing”. We gratefully acknowledge the financial support from the Austrian Research Promotion Agency (FFG; 888067).\r\nWe thank the Electron Microscopy Facility at IST Austria for their support with sputter coating the FO tips and Bernhard Pichler from AIT for software development to facilitate data evaluation.","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"short":"R. Hasler, M.H. Steger-Polt, C. Reiner-Rozman, S. Fossati, S. Lee, P. Aspermair, C. Kleber, M. Ibáñez, J. Dostalek, W. Knoll, Frontiers in Physics 11 (2023).","apa":"Hasler, R., Steger-Polt, M. H., Reiner-Rozman, C., Fossati, S., Lee, S., Aspermair, P., … Knoll, W. (2023). Optical and electronic signal stabilization of plasmonic fiber optic gate electrodes: Towards improved real-time dual-mode biosensing. <i>Frontiers in Physics</i>. Frontiers. <a href=\"https://doi.org/10.3389/fphy.2023.1202132\">https://doi.org/10.3389/fphy.2023.1202132</a>","chicago":"Hasler, Roger, Marie Helene Steger-Polt, Ciril Reiner-Rozman, Stefan Fossati, Seungho Lee, Patrik Aspermair, Christoph Kleber, Maria Ibáñez, Jakub Dostalek, and Wolfgang Knoll. “Optical and Electronic Signal Stabilization of Plasmonic Fiber Optic Gate Electrodes: Towards Improved Real-Time Dual-Mode Biosensing.” <i>Frontiers in Physics</i>. Frontiers, 2023. <a href=\"https://doi.org/10.3389/fphy.2023.1202132\">https://doi.org/10.3389/fphy.2023.1202132</a>.","ista":"Hasler R, Steger-Polt MH, Reiner-Rozman C, Fossati S, Lee S, Aspermair P, Kleber C, Ibáñez M, Dostalek J, Knoll W. 2023. Optical and electronic signal stabilization of plasmonic fiber optic gate electrodes: Towards improved real-time dual-mode biosensing. Frontiers in Physics. 11, 1202132.","mla":"Hasler, Roger, et al. “Optical and Electronic Signal Stabilization of Plasmonic Fiber Optic Gate Electrodes: Towards Improved Real-Time Dual-Mode Biosensing.” <i>Frontiers in Physics</i>, vol. 11, 1202132, Frontiers, 2023, doi:<a href=\"https://doi.org/10.3389/fphy.2023.1202132\">10.3389/fphy.2023.1202132</a>.","ieee":"R. Hasler <i>et al.</i>, “Optical and electronic signal stabilization of plasmonic fiber optic gate electrodes: Towards improved real-time dual-mode biosensing,” <i>Frontiers in Physics</i>, vol. 11. Frontiers, 2023.","ama":"Hasler R, Steger-Polt MH, Reiner-Rozman C, et al. Optical and electronic signal stabilization of plasmonic fiber optic gate electrodes: Towards improved real-time dual-mode biosensing. <i>Frontiers in Physics</i>. 2023;11. doi:<a href=\"https://doi.org/10.3389/fphy.2023.1202132\">10.3389/fphy.2023.1202132</a>"},"publication":"Frontiers in Physics","month":"07","oa":1,"article_number":"1202132","status":"public","oa_version":"Published Version","file_date_updated":"2023-08-07T07:48:11Z","_id":"13968","ddc":["530"],"intvolume":"        11","scopus_import":"1","doi":"10.3389/fphy.2023.1202132","date_created":"2023-08-06T22:01:11Z","related_material":{"record":[{"status":"public","id":"19308","relation":"research_data"}]},"volume":11,"author":[{"last_name":"Hasler","full_name":"Hasler, Roger","first_name":"Roger"},{"full_name":"Steger-Polt, Marie Helene","last_name":"Steger-Polt","first_name":"Marie Helene"},{"full_name":"Reiner-Rozman, Ciril","last_name":"Reiner-Rozman","first_name":"Ciril"},{"first_name":"Stefan","last_name":"Fossati","full_name":"Fossati, Stefan"},{"full_name":"Lee, Seungho","last_name":"Lee","orcid":"0000-0002-6962-8598","id":"BB243B88-D767-11E9-B658-BC13E6697425","first_name":"Seungho"},{"full_name":"Aspermair, Patrik","last_name":"Aspermair","first_name":"Patrik"},{"full_name":"Kleber, Christoph","last_name":"Kleber","first_name":"Christoph"},{"first_name":"Maria","id":"43C61214-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria","last_name":"Ibáñez"},{"last_name":"Dostalek","full_name":"Dostalek, Jakub","first_name":"Jakub"},{"first_name":"Wolfgang","last_name":"Knoll","full_name":"Knoll, Wolfgang"}],"day":"14","article_type":"original","publisher":"Frontiers","department":[{"_id":"MaIb"}],"acknowledged_ssus":[{"_id":"EM-Fac"}],"has_accepted_license":"1","article_processing_charge":"Yes","language":[{"iso":"eng"}],"year":"2023"}]