[{"isi":1,"publication":"Inventiones Mathematicae","article_processing_charge":"No","fulldoi":"https://doi.org/10.1007/s00222-023-01191-8","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.1905.00890"}],"scopus_import":"1","article_type":"original","oa":1,"publication_status":"published","department":[{"_id":"VaKa"}],"month":"08","day":"01","_id":"12877","acknowledgement":"J.D.S. and M.L. have been partially supported by the NSERC Discovery grant, reference number 502617-2017. M.L. was also supported by the ERC project 692925 NUHGD of Sylvain Crovisier, by the ANR AAPG 2021 PRC CoSyDy: Conformally symplectic dynamics, beyond symplectic dynamics (ANR-CE40-0014), and by the ANR JCJC PADAWAN: Parabolic dynamics, bifurcations and wandering domains (ANR-21-CE40-0012). V.K. acknowledges partial support of the NSF grant DMS-1402164 and ERC Grant # 885707.","author":[{"last_name":"De Simoi","first_name":"Jacopo","full_name":"De Simoi, Jacopo"},{"id":"FE553552-CDE8-11E9-B324-C0EBE5697425","full_name":"Kaloshin, Vadim","orcid":"0000-0002-6051-2628","last_name":"Kaloshin","first_name":"Vadim"},{"full_name":"Leguil, Martin","last_name":"Leguil","first_name":"Martin"}],"arxiv":1,"abstract":[{"text":"We consider billiards obtained by removing from the plane finitely many strictly convex analytic obstacles satisfying the non-eclipse condition. The restriction of the dynamics to the set of non-escaping orbits is conjugated to a subshift, which provides a natural labeling of periodic orbits. We show that under suitable symmetry and genericity assumptions, the Marked Length Spectrum determines the geometry of the billiard table.","lang":"eng"}],"type":"journal_article","volume":233,"page":"829-901","publication_identifier":{"eissn":["1432-1297"],"issn":["0020-9910"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","intvolume":"       233","citation":{"chicago":"De Simoi, Jacopo, Vadim Kaloshin, and Martin Leguil. “Marked Length Spectral Determination of Analytic Chaotic Billiards with Axial Symmetries.” <i>Inventiones Mathematicae</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1007/s00222-023-01191-8\">https://doi.org/10.1007/s00222-023-01191-8</a>.","short":"J. De Simoi, V. Kaloshin, M. Leguil, Inventiones Mathematicae 233 (2023) 829–901.","ieee":"J. De Simoi, V. Kaloshin, and M. Leguil, “Marked Length Spectral determination of analytic chaotic billiards with axial symmetries,” <i>Inventiones Mathematicae</i>, vol. 233. Springer Nature, pp. 829–901, 2023.","mla":"De Simoi, Jacopo, et al. “Marked Length Spectral Determination of Analytic Chaotic Billiards with Axial Symmetries.” <i>Inventiones Mathematicae</i>, vol. 233, Springer Nature, 2023, pp. 829–901, doi:<a href=\"https://doi.org/10.1007/s00222-023-01191-8\">10.1007/s00222-023-01191-8</a>.","ama":"De Simoi J, Kaloshin V, Leguil M. Marked Length Spectral determination of analytic chaotic billiards with axial symmetries. <i>Inventiones Mathematicae</i>. 2023;233:829-901. doi:<a href=\"https://doi.org/10.1007/s00222-023-01191-8\">10.1007/s00222-023-01191-8</a>","apa":"De Simoi, J., Kaloshin, V., &#38; Leguil, M. (2023). Marked Length Spectral determination of analytic chaotic billiards with axial symmetries. <i>Inventiones Mathematicae</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00222-023-01191-8\">https://doi.org/10.1007/s00222-023-01191-8</a>","ista":"De Simoi J, Kaloshin V, Leguil M. 2023. Marked Length Spectral determination of analytic chaotic billiards with axial symmetries. Inventiones Mathematicae. 233, 829–901."},"status":"public","quality_controlled":"1","ec_funded":1,"year":"2023","publisher":"Springer Nature","language":[{"iso":"eng"}],"date_updated":"2025-04-14T07:53:46Z","project":[{"grant_number":"885707","name":"Spectral rigidity and integrability for billiards and geodesic flows","_id":"9B8B92DE-BA93-11EA-9121-9846C619BF3A","call_identifier":"H2020"}],"oa_version":"Preprint","date_created":"2023-04-30T22:01:05Z","date_published":"2023-08-01T00:00:00Z","doi":"10.1007/s00222-023-01191-8","title":"Marked Length Spectral determination of analytic chaotic billiards with axial symmetries","external_id":{"arxiv":["1905.00890"],"isi":["000978887600001"]}},{"day":"01","month":"07","issue":"1","department":[{"_id":"JiFr"}],"publication_status":"published","oa":1,"article_type":"original","fulldoi":"https://doi.org/10.1111/tpj.16218","main_file_link":[{"url":"https://doi.org/10.1111/tpj.16218","open_access":"1"}],"scopus_import":"1","publication":"Plant Journal","isi":1,"article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":115,"page":"155-174","publication_identifier":{"issn":["0960-7412"],"eissn":["1365-313X"]},"type":"journal_article","abstract":[{"text":"Salicylic acid (SA) plays important roles in different aspects of plant development, including root growth, where auxin is also a major player by means of its asymmetric distribution. However, the mechanism underlying the effect of SA on the development of rice roots remains poorly understood. Here, we show that SA inhibits rice root growth by interfering with auxin transport associated with the OsPIN3t- and clathrin-mediated gene regulatory network (GRN). SA inhibits root growth as well as Brefeldin A-sensitive trafficking through a non-canonical SA signaling mechanism. Transcriptome analysis of rice seedlings treated with SA revealed that the OsPIN3t auxin transporter is at the center of a GRN involving the coat protein clathrin. The root growth and endocytic trafficking in both the pin3t and clathrin heavy chain mutants were SA insensitivity. SA inhibitory effect on the endocytosis of OsPIN3t was dependent on clathrin; however, the root growth and endocytic trafficking mediated by tyrphostin A23 (TyrA23) were independent of the pin3t mutant under SA treatment. These data reveal that SA affects rice root growth through the convergence of transcriptional and non-SA signaling mechanisms involving OsPIN3t-mediated auxin transport and clathrin-mediated trafficking as key components.","lang":"eng"}],"_id":"12878","acknowledgement":"The authors thank Professor Jianqiang Wu (Kunming Institute of Botany, Chinese Academy of Sciences) for support with phytohormone measurement. Thanks also go to Professor Pieter. B. F. Ouwerkerk (Leiden University) and Professor Jean-Benoit Morel (Plant Health Institute of Montpellier) for provision of the rice lines NB-7B-70 and NB-7B-76 and wild-type NB-61-WT, Professor Zuhua He (Chinese Academy of Sciences) for provision of the rice OsNPR1-RNAi mutant, and Professor Yinong Yang (The Pennsylvania State University) for provision of the rice line NahG. This work was supported by grants from the National Natural Science Foundation of China (Grant Nos. 32260085, 31460453, 31660501, 31860064, 31970609, 31801792 and 31960554), the Key Projects of the Applied Basic Research Plan of Yunnan Province (202301AS070082), the Major Special Program for Scientific Research, Education Department of Yunnan Province (Grant No. ZD2015005), the Start-up fund from Xishuangbanna Tropical Botanical Garden, and ‘Top Talents Program in Science and Technology’ from Yunnan Province, the SRF for ROCS, SEM (Grant No. [2013] 1792), and the Major Science and Technology Project in Yunnan Province (202102AE090042 and 202202AE090036); and the young and middle-aged academic and technical leaders reserve talent program in Yunnan Province (202205AC160076).","author":[{"first_name":"Lihui","last_name":"Jiang","full_name":"Jiang, Lihui"},{"full_name":"Yao, Baolin","last_name":"Yao","first_name":"Baolin"},{"last_name":"Zhang","first_name":"Xiaoyan","full_name":"Zhang, Xiaoyan"},{"last_name":"Wu","first_name":"Lixia","full_name":"Wu, Lixia"},{"full_name":"Fu, Qijing","first_name":"Qijing","last_name":"Fu"},{"first_name":"Yiting","last_name":"Zhao","full_name":"Zhao, Yiting"},{"full_name":"Cao, Yuxin","last_name":"Cao","first_name":"Yuxin"},{"full_name":"Zhu, Ruomeng","last_name":"Zhu","first_name":"Ruomeng"},{"last_name":"Lu","first_name":"Xinqi","full_name":"Lu, Xinqi"},{"first_name":"Wuying","last_name":"Huang","full_name":"Huang, Wuying"},{"last_name":"Zhao","first_name":"Jianping","full_name":"Zhao, Jianping"},{"first_name":"Kuixiu","last_name":"Li","full_name":"Li, Kuixiu"},{"full_name":"Zhao, Shuanglu","first_name":"Shuanglu","last_name":"Zhao"},{"full_name":"Han, Li","first_name":"Li","last_name":"Han"},{"last_name":"Zhou","first_name":"Xuan","full_name":"Zhou, Xuan"},{"full_name":"Luo, Chongyu","first_name":"Chongyu","last_name":"Luo"},{"first_name":"Haiyan","last_name":"Zhu","full_name":"Zhu, Haiyan"},{"full_name":"Yang, Jing","first_name":"Jing","last_name":"Yang"},{"last_name":"Huang","first_name":"Huichuan","full_name":"Huang, Huichuan"},{"full_name":"Zhu, Zhengge","first_name":"Zhengge","last_name":"Zhu"},{"first_name":"Xiahong","last_name":"He","full_name":"He, Xiahong"},{"first_name":"Jiří","last_name":"Friml","orcid":"0000-0002-8302-7596","id":"4159519E-F248-11E8-B48F-1D18A9856A87","full_name":"Friml, Jiří"},{"full_name":"Zhang, Zhongkai","first_name":"Zhongkai","last_name":"Zhang"},{"full_name":"Liu, Changning","first_name":"Changning","last_name":"Liu"},{"last_name":"Du","first_name":"Yunlong","full_name":"Du, Yunlong"}],"OA_place":"publisher","year":"2023","OA_type":"free access","quality_controlled":"1","status":"public","citation":{"ista":"Jiang L, Yao B, Zhang X, Wu L, Fu Q, Zhao Y, Cao Y, Zhu R, Lu X, Huang W, Zhao J, Li K, Zhao S, Han L, Zhou X, Luo C, Zhu H, Yang J, Huang H, Zhu Z, He X, Friml J, Zhang Z, Liu C, Du Y. 2023. Salicylic acid inhibits rice endocytic protein trafficking mediated by OsPIN3t and clathrin to affect root growth. Plant Journal. 115(1), 155–174.","ieee":"L. Jiang <i>et al.</i>, “Salicylic acid inhibits rice endocytic protein trafficking mediated by OsPIN3t and clathrin to affect root growth,” <i>Plant Journal</i>, vol. 115, no. 1. Wiley, pp. 155–174, 2023.","mla":"Jiang, Lihui, et al. “Salicylic Acid Inhibits Rice Endocytic Protein Trafficking Mediated by OsPIN3t and Clathrin to Affect Root Growth.” <i>Plant Journal</i>, vol. 115, no. 1, Wiley, 2023, pp. 155–74, doi:<a href=\"https://doi.org/10.1111/tpj.16218\">10.1111/tpj.16218</a>.","chicago":"Jiang, Lihui, Baolin Yao, Xiaoyan Zhang, Lixia Wu, Qijing Fu, Yiting Zhao, Yuxin Cao, et al. “Salicylic Acid Inhibits Rice Endocytic Protein Trafficking Mediated by OsPIN3t and Clathrin to Affect Root Growth.” <i>Plant Journal</i>. Wiley, 2023. <a href=\"https://doi.org/10.1111/tpj.16218\">https://doi.org/10.1111/tpj.16218</a>.","short":"L. Jiang, B. Yao, X. Zhang, L. Wu, Q. Fu, Y. Zhao, Y. Cao, R. Zhu, X. Lu, W. Huang, J. Zhao, K. Li, S. Zhao, L. Han, X. Zhou, C. Luo, H. Zhu, J. Yang, H. Huang, Z. Zhu, X. He, J. Friml, Z. Zhang, C. Liu, Y. Du, Plant Journal 115 (2023) 155–174.","apa":"Jiang, L., Yao, B., Zhang, X., Wu, L., Fu, Q., Zhao, Y., … Du, Y. (2023). Salicylic acid inhibits rice endocytic protein trafficking mediated by OsPIN3t and clathrin to affect root growth. <i>Plant Journal</i>. Wiley. <a href=\"https://doi.org/10.1111/tpj.16218\">https://doi.org/10.1111/tpj.16218</a>","ama":"Jiang L, Yao B, Zhang X, et al. Salicylic acid inhibits rice endocytic protein trafficking mediated by OsPIN3t and clathrin to affect root growth. <i>Plant Journal</i>. 2023;115(1):155-174. doi:<a href=\"https://doi.org/10.1111/tpj.16218\">10.1111/tpj.16218</a>"},"intvolume":"       115","external_id":{"isi":["000971861400001"],"pmid":["37025008 "]},"title":"Salicylic acid inhibits rice endocytic protein trafficking mediated by OsPIN3t and clathrin to affect root growth","date_published":"2023-07-01T00:00:00Z","doi":"10.1111/tpj.16218","date_created":"2023-04-30T22:01:06Z","oa_version":"Published Version","ddc":["580"],"pmid":1,"date_updated":"2026-06-18T17:29:30Z","publisher":"Wiley","language":[{"iso":"eng"}]},{"volume":14,"publication_identifier":{"issn":["1949-1034"],"eissn":["1949-1042"]},"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","license":"https://creativecommons.org/licenses/by-nc/4.0/","_id":"12880","author":[{"first_name":"Jeanae M.","last_name":"Kaneshiro","full_name":"Kaneshiro, Jeanae M."},{"full_name":"Capitanio, Juliana S.","first_name":"Juliana S.","last_name":"Capitanio"},{"first_name":"Martin W","last_name":"Hetzer","orcid":"0000-0002-2111-992X","id":"86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed","full_name":"Hetzer, Martin W"}],"acknowledgement":"We thank members of the Hetzer lab for critical review of the manuscript; Novogene for mRNA library preparation and sequencing; the Next-Generation Sequencing Core Facility at the Salk Institute, with funding from NIH-NCI CCSG: P30 014195, the Chapman Foundation, and the Helmsley Charitable Trust, for sequencing Cut&Run libraries; and the Waitt Advanced Biophotonics Core Facility at the Salk Institute, with funding from NIH-NCI CCSG: P30 014195, the Waitt Foundation, and the Chan-Zuckerberg Initiative Imaging Scientist Award, for electron microscopy sample preparation and imaging.","abstract":[{"lang":"eng","text":"Peripheral heterochromatin positioning depends on nuclear envelope associated proteins and repressive histone modifications. Here we show that overexpression (OE) of Lamin B1 (LmnB1) leads to the redistribution of peripheral heterochromatin into heterochromatic foci within the nucleoplasm. These changes represent a perturbation of heterochromatin binding at the nuclear periphery (NP) through a mechanism independent from altering other heterochromatin anchors or histone post-translational modifications. We further show that LmnB1 OE alters gene expression. These changes do not correlate with different levels of H3K9me3, but a significant number of the misregulated genes were likely mislocalized away from the NP upon LmnB1 OE. We also observed an enrichment of developmental processes amongst the upregulated genes. ~74% of these genes were normally repressed in our cell type, suggesting that LmnB1 OE promotes gene de-repression. This demonstrates a broader consequence of LmnB1 OE on cell fate, and highlights the importance of maintaining proper levels of LmnB1."}],"type":"journal_article","issue":"1","publication_status":"published","department":[{"_id":"MaHe"}],"has_accepted_license":"1","day":"18","month":"04","isi":1,"publication":"Nucleus","article_processing_charge":"No","fulldoi":"https://doi.org/10.1080/19491034.2023.2202548","scopus_import":"1","article_number":"2202548","article_type":"original","oa":1,"file_date_updated":"2023-05-02T07:24:55Z","file":[{"file_id":"12884","success":1,"relation":"main_file","file_name":"2023_Nucleus_Kaneshiro.pdf","date_created":"2023-05-02T07:24:55Z","file_size":3811113,"date_updated":"2023-05-02T07:24:55Z","content_type":"application/pdf","access_level":"open_access","checksum":"8e707eda84f64dbad7f03545ae0a83ef","creator":"dernst"}],"ddc":["570"],"pmid":1,"date_updated":"2024-10-09T21:05:01Z","oa_version":"Published Version","date_created":"2023-04-30T22:01:06Z","date_published":"2023-04-18T00:00:00Z","doi":"10.1080/19491034.2023.2202548","corr_author":"1","external_id":{"isi":["000971629400001"],"pmid":["37071033"]},"title":"Lamin B1 overexpression alters chromatin organization and gene expression","publisher":"Taylor & Francis","language":[{"iso":"eng"}],"tmp":{"name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)","image":"/images/cc_by_nc.png","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode","short":"CC BY-NC (4.0)"},"status":"public","quality_controlled":"1","year":"2023","intvolume":"        14","citation":{"chicago":"Kaneshiro, Jeanae M., Juliana S. Capitanio, and Martin Hetzer. “Lamin B1 Overexpression Alters Chromatin Organization and Gene Expression.” <i>Nucleus</i>. Taylor &#38; Francis, 2023. <a href=\"https://doi.org/10.1080/19491034.2023.2202548\">https://doi.org/10.1080/19491034.2023.2202548</a>.","short":"J.M. Kaneshiro, J.S. Capitanio, M. Hetzer, Nucleus 14 (2023).","mla":"Kaneshiro, Jeanae M., et al. “Lamin B1 Overexpression Alters Chromatin Organization and Gene Expression.” <i>Nucleus</i>, vol. 14, no. 1, 2202548, Taylor &#38; Francis, 2023, doi:<a href=\"https://doi.org/10.1080/19491034.2023.2202548\">10.1080/19491034.2023.2202548</a>.","ieee":"J. M. Kaneshiro, J. S. Capitanio, and M. Hetzer, “Lamin B1 overexpression alters chromatin organization and gene expression,” <i>Nucleus</i>, vol. 14, no. 1. Taylor &#38; Francis, 2023.","ama":"Kaneshiro JM, Capitanio JS, Hetzer M. Lamin B1 overexpression alters chromatin organization and gene expression. <i>Nucleus</i>. 2023;14(1). doi:<a href=\"https://doi.org/10.1080/19491034.2023.2202548\">10.1080/19491034.2023.2202548</a>","apa":"Kaneshiro, J. M., Capitanio, J. S., &#38; Hetzer, M. (2023). Lamin B1 overexpression alters chromatin organization and gene expression. <i>Nucleus</i>. Taylor &#38; Francis. <a href=\"https://doi.org/10.1080/19491034.2023.2202548\">https://doi.org/10.1080/19491034.2023.2202548</a>","ista":"Kaneshiro JM, Capitanio JS, Hetzer M. 2023. Lamin B1 overexpression alters chromatin organization and gene expression. Nucleus. 14(1), 2202548."}},{"publisher":"American Physical Society","language":[{"iso":"eng"}],"related_material":{"link":[{"url":"https://github.com/FrederikRavnKlausen/model-for-culture-formation","relation":"software"}],"record":[{"relation":"research_data","id":"12869","status":"public"}]},"external_id":{"arxiv":["2305.02153"],"isi":["001106396300005"],"pmid":["38115445"]},"corr_author":"1","title":"Stochastic cellular automaton model of culture formation","doi":"10.1103/PhysRevE.108.054307","date_published":"2023-11-08T00:00:00Z","oa_version":"Preprint","date_created":"2023-05-04T08:35:01Z","date_updated":"2025-09-09T12:26:01Z","pmid":1,"citation":{"apa":"Klausen, F. R., &#38; Lauritsen, A. B. (2023). Stochastic cellular automaton model of culture formation. <i>Physical Review E</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevE.108.054307\">https://doi.org/10.1103/PhysRevE.108.054307</a>","ama":"Klausen FR, Lauritsen AB. Stochastic cellular automaton model of culture formation. <i>Physical Review E</i>. 2023;108(5). doi:<a href=\"https://doi.org/10.1103/PhysRevE.108.054307\">10.1103/PhysRevE.108.054307</a>","mla":"Klausen, Frederik Ravn, and Asbjørn Bækgaard Lauritsen. “Stochastic Cellular Automaton Model of Culture Formation.” <i>Physical Review E</i>, vol. 108, no. 5, 054307, American Physical Society, 2023, doi:<a href=\"https://doi.org/10.1103/PhysRevE.108.054307\">10.1103/PhysRevE.108.054307</a>.","ieee":"F. R. Klausen and A. B. Lauritsen, “Stochastic cellular automaton model of culture formation,” <i>Physical Review E</i>, vol. 108, no. 5. American Physical Society, 2023.","short":"F.R. Klausen, A.B. Lauritsen, Physical Review E 108 (2023).","chicago":"Klausen, Frederik Ravn, and Asbjørn Bækgaard Lauritsen. “Stochastic Cellular Automaton Model of Culture Formation.” <i>Physical Review E</i>. American Physical Society, 2023. <a href=\"https://doi.org/10.1103/PhysRevE.108.054307\">https://doi.org/10.1103/PhysRevE.108.054307</a>.","ista":"Klausen FR, Lauritsen AB. 2023. Stochastic cellular automaton model of culture formation. Physical Review E. 108(5), 054307."},"intvolume":"       108","year":"2023","status":"public","quality_controlled":"1","type":"journal_article","abstract":[{"text":"We introduce a stochastic cellular automaton as a model for culture and border formation. The model can be conceptualized as a game where the expansion rate of cultures is quantified in terms of their area and perimeter in such a way that approximately geometrically round cultures get a competitive advantage. We first analyze the model with periodic boundary conditions, where we study how the model can end up in a fixed state, i.e., freezes. Then we implement the model on the European geography with mountains and rivers. We see how the model reproduces some qualitative features of European culture formation, namely, that rivers and mountains are more frequently borders between cultures, mountainous regions tend to have higher cultural diversity, and the central European plain has less clear cultural borders.","lang":"eng"}],"arxiv":1,"_id":"12890","author":[{"full_name":"Klausen, Frederik Ravn","last_name":"Klausen","first_name":"Frederik Ravn"},{"id":"e1a2682f-dc8d-11ea-abe3-81da9ac728f1","full_name":"Lauritsen, Asbjørn Bækgaard","orcid":"0000-0003-4476-2288","first_name":"Asbjørn Bækgaard","last_name":"Lauritsen"}],"acknowledgement":"Thanks to Kim Sneppen, Svend Krøjer, Peter Wildemann, Peter Rasmussen and Kent Bækgaard Lauritsen for discussions and suggestions. FRK acknowledges support from the Villum Foundation for support through the QMATH center of Excellence (Grant No. 10059) and the Villum Young Investigator (Grant No. 25452) programs.","user_id":"317138e5-6ab7-11ef-aa6d-ffef3953e345","publication_identifier":{"issn":["2470-0045"],"eissn":["2470-0053"]},"volume":108,"oa":1,"article_type":"original","article_number":"054307","fulldoi":"https://doi.org/10.1103/PhysRevE.108.054307","scopus_import":"1","main_file_link":[{"open_access":"1","url":"https://doi.org/10.48550/arXiv.2305.02153"}],"article_processing_charge":"No","publication":"Physical Review E","isi":1,"month":"11","day":"08","publication_status":"published","department":[{"_id":"GradSch"},{"_id":"RoSe"}],"issue":"5"},{"department":[{"_id":"GradSch"},{"_id":"JoFi"}],"publication_status":"published","month":"05","day":"05","has_accepted_license":"1","article_processing_charge":"No","fulldoi":"https://doi.org/10.15479/at:ista:12900","file_date_updated":"2023-07-06T11:37:40Z","file":[{"file_name":"thesis.zip","relation":"source_file","file_id":"12928","creator":"rsahu","checksum":"8cbdab9c37ee55e591092a6f66b272c4","content_type":"application/x-zip-compressed","access_level":"closed","file_size":36767177,"date_updated":"2023-06-06T22:30:03Z","date_created":"2023-05-09T08:45:14Z","embargo_to":"open_access"},{"creator":"rsahu","checksum":"439659ead46618147309be39d9dd5a8c","access_level":"closed","content_type":"application/pdf","file_size":17501990,"date_updated":"2023-07-06T11:37:40Z","date_created":"2023-05-09T08:51:17Z","file_name":"thesis_pdfa_final.pdf","relation":"main_file","file_id":"12929"}],"publication_identifier":{"issn":["2663-337X"],"isbn":["978-3-99078-030-5"]},"page":"190","acknowledged_ssus":[{"_id":"M-Shop"},{"_id":"SSU"},{"_id":"NanoFab"}],"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","_id":"12900","author":[{"last_name":"Sahu","first_name":"Rishabh","id":"47D26E34-F248-11E8-B48F-1D18A9856A87","full_name":"Sahu, Rishabh","orcid":"0000-0001-6264-2162"}],"abstract":[{"lang":"eng","text":"About a 100 years ago, we discovered that our universe is inherently noisy, that is, measuring any physical quantity with a precision beyond a certain point is not possible because of an omnipresent inherent noise. We call this - the quantum noise. Certain physical processes allow this quantum noise to get correlated in conjugate physical variables. These quantum correlations can be used to go beyond the potential of our inherently noisy universe and obtain a quantum advantage over the classical applications. \r\n\r\nQuantum noise being inherent also means that, at the fundamental level, the physical quantities are not well defined and therefore, objects can stay in multiple states at the same time. For example, the position of a particle not being well defined means that the particle is in multiple positions at the same time. About 4 decades ago, we started exploring the possibility of using objects which can be in multiple states at the same time to increase the dimensionality in computation. Thus, the field of quantum computing was born. We discovered that using quantum entanglement, a property closely related to quantum correlations, can be used to speed up computation of certain problems, such as factorisation of large numbers, faster than any known classical algorithm. Thus began the pursuit to make quantum computers a reality. \r\n\r\nTill date, we have explored quantum control over many physical systems including photons, spins, atoms, ions and even simple circuits made up of superconducting material. However, there persists one ubiquitous theme. The more readily a system interacts with an external field or matter, the more easily we can control it. But this also means that such a system can easily interact with a noisy environment and quickly lose its coherence. Consequently, such systems like electron spins need to be protected from the environment to ensure the longevity of their coherence. Other systems like nuclear spins are naturally protected as they do not interact easily with the environment. But, due to the same reason, it is harder to interact with such systems. \r\n\r\nAfter decades of experimentation with various systems, we are convinced that no one type of quantum system would be the best for all the quantum applications. We would need hybrid systems which are all interconnected - much like the current internet where all sorts of devices can all talk to each other - but now for quantum devices. A quantum internet. \r\n\r\nOptical photons are the best contenders to carry information for the quantum internet. They can carry quantum information cheaply and without much loss - the same reasons which has made them the backbone of our current internet. Following this direction, many systems, like trapped ions, have already demonstrated successful quantum links over a large distances using optical photons. However, some of the most promising contenders for quantum computing which are based on microwave frequencies have been left behind. This is because high energy optical photons can adversely affect fragile low-energy microwave systems. \r\n\r\nIn this thesis, we present substantial progress on this missing quantum link between microwave and optics using electrooptical nonlinearities in lithium niobate. The nonlinearities are enhanced by using resonant cavities for all the involved modes leading to observation of strong direct coupling between optical and microwave frequencies. With this strong coupling we are not only able to achieve almost 100\\% internal conversion efficiency with low added noise, thus presenting a quantum-enabled transducer, but also we are able to observe novel effects such as cooling of a microwave mode using optics. The strong coupling regime also leads to direct observation of dynamical backaction effect between microwave and optical frequencies which are studied in detail here. Finally, we also report first observation of microwave-optics entanglement in form of two-mode squeezed vacuum squeezed 0.7dB below vacuum level. \r\nWith this new bridge between microwave and optics, the microwave-based quantum technologies can finally be a part of a quantum network which is based on optical photons - putting us one step closer to a future with quantum internet. "}],"type":"dissertation","ec_funded":1,"status":"public","degree_awarded":"PhD","year":"2023","OA_place":"publisher","alternative_title":["ISTA Thesis"],"citation":{"ama":"Sahu R. Cavity quantum electrooptics. 2023. doi:<a href=\"https://doi.org/10.15479/at:ista:12900\">10.15479/at:ista:12900</a>","apa":"Sahu, R. (2023). <i>Cavity quantum electrooptics</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/at:ista:12900\">https://doi.org/10.15479/at:ista:12900</a>","short":"R. Sahu, Cavity Quantum Electrooptics, Institute of Science and Technology Austria, 2023.","chicago":"Sahu, Rishabh. “Cavity Quantum Electrooptics.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/at:ista:12900\">https://doi.org/10.15479/at:ista:12900</a>.","mla":"Sahu, Rishabh. <i>Cavity Quantum Electrooptics</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/at:ista:12900\">10.15479/at:ista:12900</a>.","ieee":"R. Sahu, “Cavity quantum electrooptics,” Institute of Science and Technology Austria, 2023.","ista":"Sahu R. 2023. Cavity quantum electrooptics. Institute of Science and Technology Austria."},"supervisor":[{"last_name":"Fink","first_name":"Johannes M","orcid":"0000-0001-8112-028X","id":"4B591CBA-F248-11E8-B48F-1D18A9856A87","full_name":"Fink, Johannes M"}],"date_updated":"2026-04-15T06:43:26Z","ddc":["537","535","539"],"date_created":"2023-05-05T11:08:50Z","oa_version":"Published Version","project":[{"grant_number":"758053","name":"A Fiber Optic Transceiver for Superconducting Qubits","_id":"26336814-B435-11E9-9278-68D0E5697425","call_identifier":"H2020"},{"grant_number":"899354","name":"Quantum Local Area Networks with Superconducting Qubits","_id":"9B868D20-BA93-11EA-9121-9846C619BF3A","call_identifier":"H2020"},{"name":"QUANTUM INFORMATION SYSTEMS BEYOND CLASSICAL CAPABILITIES / P5- Integration of Superconducting Quantum Circuits","_id":"bdb108fd-d553-11ed-ba76-83dc74a9864f","grant_number":"F07105"}],"keyword":["quantum optics","electrooptics","quantum networks","quantum communication","transduction"],"doi":"10.15479/at:ista:12900","date_published":"2023-05-05T00:00:00Z","title":"Cavity quantum electrooptics","corr_author":"1","related_material":{"record":[{"status":"public","relation":"new_edition","id":"13175"},{"relation":"part_of_dissertation","id":"10924","status":"public"},{"id":"9114","relation":"part_of_dissertation","status":"public"}]},"language":[{"iso":"eng"}],"publisher":"Institute of Science and Technology Austria","tmp":{"name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)","image":"/images/cc_by_nc_sa.png","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode","short":"CC BY-NC-SA (4.0)"}},{"publication_identifier":{"eissn":["1096-0783"],"issn":["0022-1236"]},"volume":285,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","arxiv":1,"author":[{"first_name":"Dario","last_name":"Feliciangeli","orcid":"0000-0003-0754-8530","full_name":"Feliciangeli, Dario","id":"41A639AA-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Gerolin, Augusto","first_name":"Augusto","last_name":"Gerolin"},{"id":"30AD2CBC-F248-11E8-B48F-1D18A9856A87","full_name":"Portinale, Lorenzo","last_name":"Portinale","first_name":"Lorenzo"}],"_id":"12911","acknowledgement":"This work started when A.G. was visiting the Erwin Schrödinger Institute and then continued when D.F. and L.P visited the Theoretical Chemistry Department of the Vrije Universiteit Amsterdam. The authors thank the hospitality of both places and, especially, P. Gori-Giorgi and K. Giesbertz for fruitful discussions and literature suggestions in the early state of the project. The authors also thank J. Maas and R. Seiringer for their feedback and useful comments to a first draft of the article. Finally, we acknowledge the high quality review done by the anonymous referee of our paper, who we would like to thank for the excellent work and constructive feedback.\r\nD.F acknowledges support by the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation programme (grant agreements No 716117 and No 694227). A.G. acknowledges funding by the HORIZON EUROPE European Research Council under H2020/MSCA-IF “OTmeetsDFT” [grant ID: 795942] as well as partial support of his research by the Canada Research Chairs Program (ID 2021-00234) and Natural Sciences and Engineering Research Council of Canada, RGPIN-2022-05207. L.P. acknowledges support by the Austrian Science Fund (FWF), grants No W1245 and No F65, and by the Deutsche Forschungsgemeinschaft (DFG) - Project number 390685813.","type":"journal_article","abstract":[{"text":"This paper establishes new connections between many-body quantum systems, One-body Reduced Density Matrices Functional Theory (1RDMFT) and Optimal Transport (OT), by interpreting the problem of computing the ground-state energy of a finite-dimensional composite quantum system at positive temperature as a non-commutative entropy regularized Optimal Transport problem. We develop a new approach to fully characterize the dual-primal solutions in such non-commutative setting. The mathematical formalism is particularly relevant in quantum chemistry: numerical realizations of the many-electron ground-state energy can be computed via a non-commutative version of Sinkhorn algorithm. Our approach allows to prove convergence and robustness of this algorithm, which, to our best knowledge, were unknown even in the two marginal case. Our methods are based on a priori estimates in the dual problem, which we believe to be of independent interest. Finally, the above results are extended in 1RDMFT setting, where bosonic or fermionic symmetry conditions are enforced on the problem.","lang":"eng"}],"publication_status":"published","department":[{"_id":"RoSe"},{"_id":"JaMa"}],"issue":"4","month":"08","day":"15","scopus_import":"1","fulldoi":"https://doi.org/10.1016/j.jfa.2023.109963","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2106.11217","open_access":"1"}],"article_processing_charge":"No","publication":"Journal of Functional Analysis","isi":1,"oa":1,"article_type":"original","article_number":"109963","oa_version":"Preprint","date_created":"2023-05-07T22:01:02Z","project":[{"grant_number":"716117","name":"Optimal Transport and Stochastic Dynamics","call_identifier":"H2020","_id":"256E75B8-B435-11E9-9278-68D0E5697425"},{"call_identifier":"H2020","_id":"25C6DC12-B435-11E9-9278-68D0E5697425","name":"Analysis of quantum many-body systems","grant_number":"694227"},{"name":"Taming Complexity in Partial Differential Systems","_id":"260482E2-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"F06504"}],"date_updated":"2025-04-15T08:31:52Z","external_id":{"isi":["000990804300001"],"arxiv":["2106.11217"]},"title":"A non-commutative entropic optimal transport approach to quantum composite systems at positive temperature","doi":"10.1016/j.jfa.2023.109963","date_published":"2023-08-15T00:00:00Z","related_material":{"record":[{"status":"public","relation":"earlier_version","id":"9792"}]},"publisher":"Elsevier","language":[{"iso":"eng"}],"ec_funded":1,"status":"public","quality_controlled":"1","year":"2023","intvolume":"       285","citation":{"ista":"Feliciangeli D, Gerolin A, Portinale L. 2023. A non-commutative entropic optimal transport approach to quantum composite systems at positive temperature. Journal of Functional Analysis. 285(4), 109963.","ama":"Feliciangeli D, Gerolin A, Portinale L. A non-commutative entropic optimal transport approach to quantum composite systems at positive temperature. <i>Journal of Functional Analysis</i>. 2023;285(4). doi:<a href=\"https://doi.org/10.1016/j.jfa.2023.109963\">10.1016/j.jfa.2023.109963</a>","apa":"Feliciangeli, D., Gerolin, A., &#38; Portinale, L. (2023). A non-commutative entropic optimal transport approach to quantum composite systems at positive temperature. <i>Journal of Functional Analysis</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jfa.2023.109963\">https://doi.org/10.1016/j.jfa.2023.109963</a>","short":"D. Feliciangeli, A. Gerolin, L. Portinale, Journal of Functional Analysis 285 (2023).","chicago":"Feliciangeli, Dario, Augusto Gerolin, and Lorenzo Portinale. “A Non-Commutative Entropic Optimal Transport Approach to Quantum Composite Systems at Positive Temperature.” <i>Journal of Functional Analysis</i>. Elsevier, 2023. <a href=\"https://doi.org/10.1016/j.jfa.2023.109963\">https://doi.org/10.1016/j.jfa.2023.109963</a>.","mla":"Feliciangeli, Dario, et al. “A Non-Commutative Entropic Optimal Transport Approach to Quantum Composite Systems at Positive Temperature.” <i>Journal of Functional Analysis</i>, vol. 285, no. 4, 109963, Elsevier, 2023, doi:<a href=\"https://doi.org/10.1016/j.jfa.2023.109963\">10.1016/j.jfa.2023.109963</a>.","ieee":"D. Feliciangeli, A. Gerolin, and L. Portinale, “A non-commutative entropic optimal transport approach to quantum composite systems at positive temperature,” <i>Journal of Functional Analysis</i>, vol. 285, no. 4. Elsevier, 2023."}},{"publication_status":"published","department":[{"_id":"AnHi"}],"month":"04","day":"26","has_accepted_license":"1","scopus_import":"1","fulldoi":"https://doi.org/10.1038/s41467-023-38005-7","article_processing_charge":"No","publication":"Nature Communications","isi":1,"file":[{"relation":"main_file","file_name":"2023_NatureComm_DiezMerida.pdf","file_id":"12917","success":1,"checksum":"a778105665c10beb2354c92d2b295115","creator":"dernst","date_created":"2023-05-08T07:26:40Z","date_updated":"2023-05-08T07:26:40Z","file_size":1405588,"access_level":"open_access","content_type":"application/pdf"}],"file_date_updated":"2023-05-08T07:26:40Z","oa":1,"article_type":"original","article_number":"2396","publication_identifier":{"eissn":["2041-1723"]},"volume":14,"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","acknowledgement":"We are grateful for the fruitful discussions with Allan MacDonald and Andrei Bernevig. D.K.E. acknowledges support from the Ministry of Economy and Competitiveness of Spain through the “Severo Ochoa” program for Centers of Excellence in R&D (SE5-0522), Fundació Privada Cellex, Fundació Privada Mir-Puig, the Generalitat de Catalunya through the CERCA program, funding from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation program (grant agreement no. 852927)” and the La Caixa Foundation. K.T.L. acknowledges the support of the Ministry of Science and Technology of China and the HKRGC through grants MOST20SC04, C6025-19G, 16310219, 16309718, and 16310520. J.D.M. acknowledges support from the INPhINIT ‘la Caixa’ Foundation (ID 100010434) fellowship program (LCF/BQ/DI19/11730021). Y.M.X. acknowledges the support of HKRGC through Grant No. PDFS2223-6S01.","_id":"12913","author":[{"full_name":"Díez-Mérida, J.","first_name":"J.","last_name":"Díez-Mérida"},{"full_name":"Díez-Carlón, A.","last_name":"Díez-Carlón","first_name":"A."},{"full_name":"Yang, S. Y.","last_name":"Yang","first_name":"S. Y."},{"full_name":"Xie, Y. M.","first_name":"Y. M.","last_name":"Xie"},{"full_name":"Gao, X. J.","last_name":"Gao","first_name":"X. J."},{"id":"5479D234-2D30-11EA-89CC-40953DDC885E","full_name":"Senior, Jorden L","last_name":"Senior","first_name":"Jorden L"},{"full_name":"Watanabe, K.","first_name":"K.","last_name":"Watanabe"},{"full_name":"Taniguchi, T.","last_name":"Taniguchi","first_name":"T."},{"full_name":"Lu, X.","first_name":"X.","last_name":"Lu"},{"id":"4AD6785A-F248-11E8-B48F-1D18A9856A87","full_name":"Higginbotham, Andrew P","orcid":"0000-0003-2607-2363","last_name":"Higginbotham","first_name":"Andrew P"},{"first_name":"K. T.","last_name":"Law","full_name":"Law, K. T."},{"first_name":"Dmitri K.","last_name":"Efetov","full_name":"Efetov, Dmitri K."}],"type":"journal_article","abstract":[{"text":"The coexistence of gate-tunable superconducting, magnetic and topological orders in magic-angle twisted bilayer graphene provides opportunities for the creation of hybrid Josephson junctions. Here we report the fabrication of gate-defined symmetry-broken Josephson junctions in magic-angle twisted bilayer graphene, where the weak link is gate-tuned close to the correlated insulator state with a moiré filling factor of υ = −2. We observe a phase-shifted and asymmetric Fraunhofer pattern with a pronounced magnetic hysteresis. Our theoretical calculations of the junction weak link—with valley polarization and orbital magnetization—explain most of these unconventional features. The effects persist up to the critical temperature of 3.5 K, with magnetic hysteresis observed below 800 mK. We show how the combination of magnetization and its current-induced magnetization switching allows us to realise a programmable zero-field superconducting diode. Our results represent a major advance towards the creation of future superconducting quantum electronic devices.","lang":"eng"}],"status":"public","quality_controlled":"1","year":"2023","intvolume":"        14","citation":{"ista":"Díez-Mérida J, Díez-Carlón A, Yang SY, Xie YM, Gao XJ, Senior JL, Watanabe K, Taniguchi T, Lu X, Higginbotham AP, Law KT, Efetov DK. 2023. Symmetry-broken Josephson junctions and superconducting diodes in magic-angle twisted bilayer graphene. Nature Communications. 14, 2396.","mla":"Díez-Mérida, J., et al. “Symmetry-Broken Josephson Junctions and Superconducting Diodes in Magic-Angle Twisted Bilayer Graphene.” <i>Nature Communications</i>, vol. 14, 2396, Springer Nature, 2023, doi:<a href=\"https://doi.org/10.1038/s41467-023-38005-7\">10.1038/s41467-023-38005-7</a>.","ieee":"J. Díez-Mérida <i>et al.</i>, “Symmetry-broken Josephson junctions and superconducting diodes in magic-angle twisted bilayer graphene,” <i>Nature Communications</i>, vol. 14. Springer Nature, 2023.","chicago":"Díez-Mérida, J., A. Díez-Carlón, S. Y. Yang, Y. M. Xie, X. J. Gao, Jorden L Senior, K. Watanabe, et al. “Symmetry-Broken Josephson Junctions and Superconducting Diodes in Magic-Angle Twisted Bilayer Graphene.” <i>Nature Communications</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s41467-023-38005-7\">https://doi.org/10.1038/s41467-023-38005-7</a>.","short":"J. Díez-Mérida, A. Díez-Carlón, S.Y. Yang, Y.M. Xie, X.J. Gao, J.L. Senior, K. Watanabe, T. Taniguchi, X. Lu, A.P. Higginbotham, K.T. Law, D.K. Efetov, Nature Communications 14 (2023).","apa":"Díez-Mérida, J., Díez-Carlón, A., Yang, S. Y., Xie, Y. M., Gao, X. J., Senior, J. L., … Efetov, D. K. (2023). Symmetry-broken Josephson junctions and superconducting diodes in magic-angle twisted bilayer graphene. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-023-38005-7\">https://doi.org/10.1038/s41467-023-38005-7</a>","ama":"Díez-Mérida J, Díez-Carlón A, Yang SY, et al. Symmetry-broken Josephson junctions and superconducting diodes in magic-angle twisted bilayer graphene. <i>Nature Communications</i>. 2023;14. doi:<a href=\"https://doi.org/10.1038/s41467-023-38005-7\">10.1038/s41467-023-38005-7</a>"},"date_created":"2023-05-07T22:01:03Z","oa_version":"Published Version","pmid":1,"date_updated":"2023-08-01T14:34:00Z","ddc":["530"],"external_id":{"isi":["000979744000004"],"pmid":["37100775"]},"title":"Symmetry-broken Josephson junctions and superconducting diodes in magic-angle twisted bilayer graphene","doi":"10.1038/s41467-023-38005-7","date_published":"2023-04-26T00:00:00Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"language":[{"iso":"eng"}],"publisher":"Springer Nature"},{"citation":{"ama":"Suzuki F, Unruh WG. Numerical quantum clock simulations for measuring tunneling times. <i>Physical Review A</i>. 2023;107(4). doi:<a href=\"https://doi.org/10.1103/PhysRevA.107.042216\">10.1103/PhysRevA.107.042216</a>","apa":"Suzuki, F., &#38; Unruh, W. G. (2023). Numerical quantum clock simulations for measuring tunneling times. <i>Physical Review A</i>. American Physical Society. <a href=\"https://doi.org/10.1103/PhysRevA.107.042216\">https://doi.org/10.1103/PhysRevA.107.042216</a>","short":"F. Suzuki, W.G. Unruh, Physical Review A 107 (2023).","chicago":"Suzuki, Fumika, and William G. Unruh. “Numerical Quantum Clock Simulations for Measuring Tunneling Times.” <i>Physical Review A</i>. American Physical Society, 2023. <a href=\"https://doi.org/10.1103/PhysRevA.107.042216\">https://doi.org/10.1103/PhysRevA.107.042216</a>.","ieee":"F. Suzuki and W. G. Unruh, “Numerical quantum clock simulations for measuring tunneling times,” <i>Physical Review A</i>, vol. 107, no. 4. American Physical Society, 2023.","mla":"Suzuki, Fumika, and William G. Unruh. “Numerical Quantum Clock Simulations for Measuring Tunneling Times.” <i>Physical Review A</i>, vol. 107, no. 4, 042216, American Physical Society, 2023, doi:<a href=\"https://doi.org/10.1103/PhysRevA.107.042216\">10.1103/PhysRevA.107.042216</a>.","ista":"Suzuki F, Unruh WG. 2023. Numerical quantum clock simulations for measuring tunneling times. Physical Review A. 107(4), 042216."},"intvolume":"       107","year":"2023","quality_controlled":"1","status":"public","ec_funded":1,"language":[{"iso":"eng"}],"publisher":"American Physical Society","date_published":"2023-04-20T00:00:00Z","doi":"10.1103/PhysRevA.107.042216","external_id":{"isi":["000975799300006"],"arxiv":["2207.13130"]},"title":"Numerical quantum clock simulations for measuring tunneling times","corr_author":"1","date_updated":"2025-04-14T07:44:01Z","project":[{"_id":"260C2330-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"ISTplus - Postdoctoral Fellowships","grant_number":"754411"}],"date_created":"2023-05-07T22:01:03Z","oa_version":"Preprint","article_number":"042216","article_type":"original","oa":1,"publication":"Physical Review A","isi":1,"article_processing_charge":"No","fulldoi":"https://doi.org/10.1103/PhysRevA.107.042216","scopus_import":"1","main_file_link":[{"url":"https://doi.org/10.48550/arXiv.2207.13130","open_access":"1"}],"month":"04","day":"20","issue":"4","department":[{"_id":"MiLe"}],"publication_status":"published","abstract":[{"text":"We numerically study two methods of measuring tunneling times using a quantum clock. In the conventional method using the Larmor clock, we show that the Larmor tunneling time can be shorter for higher tunneling barriers. In the second method, we study the probability of a spin-flip of a particle when it is transmitted through a potential barrier including a spatially rotating field interacting with its spin. According to the adiabatic theorem, the probability depends on the velocity of the particle inside the barrier. It is numerically observed that the probability increases for higher barriers, which is consistent with the result obtained by the Larmor clock. By comparing outcomes for different initial spin states, we suggest that one of the main causes of the apparent decrease in the tunneling time can be the filtering effect occurring at the end of the barrier.","lang":"eng"}],"type":"journal_article","acknowledgement":"We thank W. H. Zurek, N. Sinitsyn, M. O. Scully, M. Arndt, and C. H. Marrows for helpful discussions. F.S. acknowledges support from the Los Alamos National Laboratory LDRD program under Project No. 20230049DR and the Center for Nonlinear Studies. F.S. also thanks the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant No. 754411 for support. W.G.U. thanks the Natural Science and Engineering Research Council of Canada, the Hagler Institute of Texas A&M University, the Helmholz Inst HZDR, Germany for support while this work was being done.","_id":"12914","author":[{"first_name":"Fumika","last_name":"Suzuki","orcid":"0000-0003-4982-5970","full_name":"Suzuki, Fumika","id":"650C99FC-1079-11EA-A3C0-73AE3DDC885E"},{"full_name":"Unruh, William G.","last_name":"Unruh","first_name":"William G."}],"arxiv":1,"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","volume":107,"publication_identifier":{"eissn":["2469-9934"],"issn":["2469-9926"]}},{"external_id":{"isi":["000976063200001"],"pmid":["37071412"]},"title":"Thermoelectric performance of surface-engineered Cu1.5–xTe–Cu2Se nanocomposites","corr_author":"1","doi":"10.1021/acsnano.3c00495","date_published":"2023-05-09T00:00:00Z","date_created":"2023-05-07T22:01:04Z","oa_version":"Submitted Version","date_updated":"2025-06-25T06:01:54Z","pmid":1,"publisher":"American Chemical Society","language":[{"iso":"eng"}],"OA_type":"green","year":"2023","OA_place":"repository","status":"public","quality_controlled":"1","citation":{"apa":"Xing, C., Zhang, Y., Xiao, K., Han, X., Liu, Y., Nan, B., … Cabot, A. (2023). Thermoelectric performance of surface-engineered Cu1.5–xTe–Cu2Se nanocomposites. <i>ACS Nano</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acsnano.3c00495\">https://doi.org/10.1021/acsnano.3c00495</a>","ama":"Xing C, Zhang Y, Xiao K, et al. Thermoelectric performance of surface-engineered Cu1.5–xTe–Cu2Se nanocomposites. <i>ACS Nano</i>. 2023;17(9):8442-8452. doi:<a href=\"https://doi.org/10.1021/acsnano.3c00495\">10.1021/acsnano.3c00495</a>","mla":"Xing, Congcong, et al. “Thermoelectric Performance of Surface-Engineered Cu1.5–XTe–Cu2Se Nanocomposites.” <i>ACS Nano</i>, vol. 17, no. 9, American Chemical Society, 2023, pp. 8442–52, doi:<a href=\"https://doi.org/10.1021/acsnano.3c00495\">10.1021/acsnano.3c00495</a>.","ieee":"C. Xing <i>et al.</i>, “Thermoelectric performance of surface-engineered Cu1.5–xTe–Cu2Se nanocomposites,” <i>ACS Nano</i>, vol. 17, no. 9. American Chemical Society, pp. 8442–8452, 2023.","short":"C. Xing, Y. Zhang, K. Xiao, X. Han, Y. Liu, B. Nan, M.G. Ramon, K.H. Lim, J. Li, J. Arbiol, B. Poudel, A. Nozariasbmarz, W. Li, M. Ibáñez, A. Cabot, ACS Nano 17 (2023) 8442–8452.","chicago":"Xing, Congcong, Yu Zhang, Ke Xiao, Xu Han, Yu Liu, Bingfei Nan, Maria Garcia Ramon, et al. “Thermoelectric Performance of Surface-Engineered Cu1.5–XTe–Cu2Se Nanocomposites.” <i>ACS Nano</i>. American Chemical Society, 2023. <a href=\"https://doi.org/10.1021/acsnano.3c00495\">https://doi.org/10.1021/acsnano.3c00495</a>.","ista":"Xing C, Zhang Y, Xiao K, Han X, Liu Y, Nan B, Ramon MG, Lim KH, Li J, Arbiol J, Poudel B, Nozariasbmarz A, Li W, Ibáñez M, Cabot A. 2023. Thermoelectric performance of surface-engineered Cu1.5–xTe–Cu2Se nanocomposites. ACS Nano. 17(9), 8442–8452."},"intvolume":"        17","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_identifier":{"issn":["1936-0851"],"eissn":["1936-086X"]},"page":"8442-8452","volume":17,"type":"journal_article","abstract":[{"lang":"eng","text":"Cu2–xS and Cu2–xSe have recently been reported as promising thermoelectric (TE) materials for medium-temperature applications. In contrast, Cu2–xTe, another member of the copper chalcogenide family, typically exhibits low Seebeck coefficients that limit its potential to achieve a superior thermoelectric figure of merit, zT, particularly in the low-temperature range where this material could be effective. To address this, we investigated the TE performance of Cu1.5–xTe–Cu2Se nanocomposites by consolidating surface-engineered Cu1.5Te nanocrystals. This surface engineering strategy allows for precise adjustment of Cu/Te ratios and results in a reversible phase transition at around 600 K in Cu1.5–xTe–Cu2Se nanocomposites, as systematically confirmed by in situ high-temperature X-ray diffraction combined with differential scanning calorimetry analysis. The phase transition leads to a conversion from metallic-like to semiconducting-like TE properties. Additionally, a layer of Cu2Se generated around Cu1.5–xTe nanoparticles effectively inhibits Cu1.5–xTe grain growth, minimizing thermal conductivity and decreasing hole concentration. These properties indicate that copper telluride based compounds have a promising thermoelectric potential, translated into a high dimensionless zT of 1.3 at 560 K."}],"author":[{"full_name":"Xing, Congcong","first_name":"Congcong","last_name":"Xing"},{"full_name":"Zhang, Yu","last_name":"Zhang","first_name":"Yu"},{"full_name":"Xiao, Ke","last_name":"Xiao","first_name":"Ke"},{"full_name":"Han, Xu","last_name":"Han","first_name":"Xu"},{"orcid":"0000-0001-7313-6740","id":"2A70014E-F248-11E8-B48F-1D18A9856A87","full_name":"Liu, Yu","first_name":"Yu","last_name":"Liu"},{"last_name":"Nan","first_name":"Bingfei","full_name":"Nan, Bingfei"},{"last_name":"Ramon","first_name":"Maria Garcia","full_name":"Ramon, Maria Garcia","id":"1ffff7cd-ed76-11ed-8d5f-be5e7c364eb9"},{"first_name":"Khak Ho","last_name":"Lim","full_name":"Lim, Khak Ho"},{"first_name":"Junshan","last_name":"Li","full_name":"Li, Junshan"},{"full_name":"Arbiol, Jordi","first_name":"Jordi","last_name":"Arbiol"},{"last_name":"Poudel","first_name":"Bed","full_name":"Poudel, Bed"},{"full_name":"Nozariasbmarz, Amin","first_name":"Amin","last_name":"Nozariasbmarz"},{"full_name":"Li, Wenjie","first_name":"Wenjie","last_name":"Li"},{"orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria","id":"43C61214-F248-11E8-B48F-1D18A9856A87","last_name":"Ibáñez","first_name":"Maria"},{"last_name":"Cabot","first_name":"Andreu","full_name":"Cabot, Andreu"}],"_id":"12915","acknowledgement":"The authors acknowledge support from the projects ENE2016-77798-C4-3-R and NANOGEN (PID2020-116093RB-C43) funded by MCIN/AEI/10.13039/501100011033/and by “ERDF A way of making Europe”, and by the “European Union”. K.X. and B.N. thank the China Scholarship Council (CSC) for scholarship support. The authors acknowledge funding from Generalitat de Catalunya 2017 SGR 327 and 2017 SGR 1246. ICN2 is supported by the Severo Ochoa program from the Spanish MCIN/AEI (Grant No.: CEX2021-001214-S). IREC and ICN2 are funded by the CERCA Programme/Generalitat de Catalunya. J.L. acknowledges support from the Natural Science Foundation of Sichuan province (2022NSFSC1229). Part of the present work was performed in the frameworks of Universitat de Barcelona Nanoscience Ph.D. program and Universitat Autònoma de Barcelona Materials Science Ph.D. program. Y.L. acknowledges funding from the National Natural Science Foundation of China (Grant No. 22209034) and the Innovation and Entrepreneurship Project of Overseas Returnees in Anhui Province (Grants No. 2022LCX002). K.H.L. acknowledges the financial support of the National Natural Science Foundation of China (Grant No. 22208293).","day":"09","month":"05","publication_status":"published","department":[{"_id":"MaIb"}],"issue":"9","oa":1,"article_type":"original","fulldoi":"https://doi.org/10.1021/acsnano.3c00495","scopus_import":"1","main_file_link":[{"open_access":"1","url":"https://ddd.uab.cat/pub/artpub/2023/zlnqprw07rek/acsnan_a2023_Pre.pdf"}],"article_processing_charge":"No","isi":1,"publication":"ACS Nano"},{"title":"Data from: Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster","corr_author":"1","doi":"10.15479/AT:ISTA:12933","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2023-05-15T00:00:00Z","date_created":"2023-05-10T10:00:49Z","oa_version":"Published Version","date_updated":"2026-04-07T13:25:33Z","contributor":[{"id":"2A0848E2-F248-11E8-B48F-1D18A9856A87","first_name":"Ariana","last_name":"Macon"},{"first_name":"Beatriz","last_name":"Vicoso","orcid":"0000-0002-4579-8306","id":"49E1C5C6-F248-11E8-B48F-1D18A9856A87"}],"ddc":["570"],"type":"research_data","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"abstract":[{"lang":"eng","text":"Datasets of the publication \"Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster\"."}],"publisher":"Institute of Science and Technology Austria","related_material":{"record":[{"status":"public","id":"14077","relation":"used_in_publication"},{"relation":"used_in_publication","id":"14058","status":"public"}]},"_id":"12933","author":[{"orcid":"0000-0001-8330-1754","id":"33AB266C-F248-11E8-B48F-1D18A9856A87","full_name":"Puixeu Sala, Gemma","first_name":"Gemma","last_name":"Puixeu Sala"}],"day":"15","month":"05","has_accepted_license":"1","year":"2023","department":[{"_id":"GradSch"},{"_id":"NiBa"},{"_id":"BeVi"}],"status":"public","file":[{"file_name":"Dataset_S1.csv","relation":"main_file","success":1,"file_id":"12934","checksum":"0ba0bcd0bb8b18d84792136a4370df90","creator":"gpuixeus","date_created":"2023-05-10T09:41:43Z","access_level":"open_access","content_type":"text/csv","file_size":8029982,"date_updated":"2023-05-10T09:41:43Z"},{"relation":"main_file","file_name":"Dataset_S2.csv","file_id":"12935","success":1,"checksum":"a62aa9a6d4904e0fdb699cf752640863","creator":"gpuixeus","date_created":"2023-05-10T09:41:43Z","date_updated":"2023-05-10T09:41:43Z","file_size":13667640,"content_type":"text/csv","access_level":"open_access"},{"file_name":"Dataset_S3.csv","relation":"main_file","file_id":"12936","success":1,"creator":"gpuixeus","checksum":"e20ea7f4f8a9bdf1b3849a44664ae58b","date_created":"2023-05-10T09:41:48Z","content_type":"text/csv","access_level":"open_access","date_updated":"2023-05-10T09:41:48Z","file_size":8369141},{"checksum":"f6156e5fc44446c907ddd0d7289d4cf8","creator":"gpuixeus","access_level":"open_access","content_type":"text/csv","date_updated":"2023-05-10T09:41:50Z","file_size":19543247,"date_created":"2023-05-10T09:41:50Z","file_name":"Dataset_S4.csv","relation":"main_file","success":1,"file_id":"12937"},{"success":1,"file_id":"12944","file_name":"readme.txt","relation":"main_file","date_created":"2023-05-11T12:50:18Z","content_type":"text/plain","access_level":"open_access","date_updated":"2023-05-11T12:50:18Z","file_size":4566,"creator":"gpuixeus","checksum":"ae9f54c77a1c42b666ae6c1dfd33ac86"}],"file_date_updated":"2023-05-11T12:50:18Z","oa":1,"citation":{"apa":"Puixeu Sala, G. 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Puixeu Sala, “Data from: Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster.” Institute of Science and Technology Austria, 2023.","chicago":"Puixeu Sala, Gemma. “Data from: Sex-Specific Estimation of Cis and Trans Regulation of Gene Expression in Heads and Gonads of Drosophila Melanogaster.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/AT:ISTA:12933\">https://doi.org/10.15479/AT:ISTA:12933</a>.","short":"G. Puixeu Sala, (2023).","ista":"Puixeu Sala G. 2023. Data from: Sex-specific estimation of cis and trans regulation of gene expression in heads and gonads of Drosophila melanogaster, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:12933\">10.15479/AT:ISTA:12933</a>."},"fulldoi":"https://doi.org/10.15479/AT:ISTA:12933","article_processing_charge":"No"},{"citation":{"chicago":"Cremer, Sylvia. “Data from: ‘Dynamic Pathogen Detection and Social Feedback Shape Collective Hygiene in Ants’ .” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/AT:ISTA:12945\">https://doi.org/10.15479/AT:ISTA:12945</a>.","short":"S. Cremer, (2023).","ieee":"S. Cremer, “Data from: ‘Dynamic pathogen detection and social feedback shape collective hygiene in ants’ .” Institute of Science and Technology Austria, 2023.","mla":"Cremer, Sylvia. <i>Data from: “Dynamic Pathogen Detection and Social Feedback Shape Collective Hygiene in Ants” </i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:12945\">10.15479/AT:ISTA:12945</a>.","ama":"Cremer S. Data from: “Dynamic pathogen detection and social feedback shape collective hygiene in ants” . 2023. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:12945\">10.15479/AT:ISTA:12945</a>","apa":"Cremer, S. (2023). Data from: “Dynamic pathogen detection and social feedback shape collective hygiene in ants” . Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:12945\">https://doi.org/10.15479/AT:ISTA:12945</a>","ista":"Cremer S. 2023. 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H. (2023). The infinitesimal model with dominance. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:12949\">https://doi.org/10.15479/AT:ISTA:12949</a>","ama":"Barton NH. The infinitesimal model with dominance. 2023. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:12949\">10.15479/AT:ISTA:12949</a>","mla":"Barton, Nicholas H. <i>The Infinitesimal Model with Dominance</i>. Institute of Science and Technology Austria, 2023, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:12949\">10.15479/AT:ISTA:12949</a>.","ieee":"N. H. Barton, “The infinitesimal model with dominance.” Institute of Science and Technology Austria, 2023.","chicago":"Barton, Nicholas H. “The Infinitesimal Model with Dominance.” Institute of Science and Technology Austria, 2023. <a href=\"https://doi.org/10.15479/AT:ISTA:12949\">https://doi.org/10.15479/AT:ISTA:12949</a>.","short":"N.H. Barton, (2023).","ista":"Barton NH. 2023. The infinitesimal model with dominance, Institute of Science and Technology Austria, <a href=\"https://doi.org/10.15479/AT:ISTA:12949\">10.15479/AT:ISTA:12949</a>."},"doi":"10.15479/AT:ISTA:12949","date_published":"2023-05-13T00:00:00Z","title":"The infinitesimal model with dominance","corr_author":"1","date_updated":"2025-09-09T13:07:07Z","ddc":["576"],"oa_version":"Published Version","date_created":"2023-05-13T09:49:09Z","keyword":["Quantitative genetics","infinitesimal model"],"project":[{"grant_number":"101055327","name":"Understanding the evolution of continuous genomes","_id":"bd6958e0-d553-11ed-ba76-86eba6a76c00"}],"publisher":"Institute of Science and Technology Austria","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"related_material":{"record":[{"id":"14452","relation":"used_in_publication","status":"public"}]},"day":"13","month":"05","has_accepted_license":"1","department":[{"_id":"NiBa"}],"file_date_updated":"2023-05-16T04:09:08Z","file":[{"access_level":"open_access","content_type":"application/octet-stream","file_size":13662,"date_updated":"2023-05-13T09:36:33Z","date_created":"2023-05-13T09:36:33Z","checksum":"b0ce7d4b1ee7e7265430ceed36fc3336","creator":"nbarton","success":1,"file_id":"12950","file_name":"Neutral identities 16th Jan","relation":"main_file"},{"file_name":"p, zA, zD, N=30 neutral III","relation":"main_file","file_id":"12951","success":1,"checksum":"ad5035ad4f7d3b150a252c79884f6a83","creator":"nbarton","date_created":"2023-05-13T09:38:17Z","access_level":"open_access","content_type":"application/octet-stream","file_size":181619928,"date_updated":"2023-05-13T09:38:17Z"},{"file_name":"p, zA, zD, N=30 neutral IV","relation":"main_file","success":1,"file_id":"12952","creator":"nbarton","checksum":"62182a1de796256edd6f4223704312ef","date_created":"2023-05-13T09:41:59Z","access_level":"open_access","content_type":"application/octet-stream","date_updated":"2023-05-13T09:41:59Z","file_size":605902074},{"success":1,"file_id":"12953","relation":"main_file","file_name":"p, zA, zD, N=30 selected k=5","file_size":1018238746,"date_updated":"2023-05-13T09:46:52Z","access_level":"open_access","content_type":"application/octet-stream","date_created":"2023-05-13T09:46:52Z","creator":"nbarton","checksum":"af775dda5c4f6859cb1e5a81ec40a667"},{"success":1,"file_id":"12954","relation":"main_file","file_name":"Pairwise F N=30 neutral II","date_updated":"2023-05-13T09:42:05Z","file_size":3197160,"access_level":"open_access","content_type":"application/octet-stream","date_created":"2023-05-13T09:42:05Z","creator":"nbarton","checksum":"af26f3394c387d3ada14b434cd68b1e5"},{"checksum":"d5da7dc0e7282dd48222e26d12e34220","creator":"nbarton","date_created":"2023-05-13T09:42:06Z","access_level":"open_access","content_type":"application/octet-stream","date_updated":"2023-05-13T09:42:06Z","file_size":55492,"file_name":"Pedigrees N=30 neutral II","relation":"main_file","success":1,"file_id":"12955"},{"file_id":"12956","success":1,"relation":"main_file","file_name":"selected reps N=30 selected k=1,2 300 reps III","file_size":474003467,"date_updated":"2023-05-13T09:46:06Z","content_type":"application/octet-stream","access_level":"open_access","date_created":"2023-05-13T09:46:06Z","creator":"nbarton","checksum":"00f386d80677590e29f6235d49cba58d"},{"relation":"main_file","file_name":"Algorithm for caclulating identities.nb","success":1,"file_id":"12957","creator":"nbarton","checksum":"658cef3eaea6136a4d24da4f074191d7","date_created":"2023-05-13T09:46:08Z","date_updated":"2023-05-13T09:46:08Z","file_size":121209,"content_type":"application/octet-stream","access_level":"open_access"},{"relation":"main_file","file_name":"Infinitesimal with dominance.nb","file_id":"12958","success":1,"creator":"nbarton","checksum":"db9b6dddd7a596d974e25f5e78f5c45c","file_size":1803898,"date_updated":"2023-05-13T09:46:08Z","content_type":"application/octet-stream","access_level":"open_access","date_created":"2023-05-13T09:46:08Z"},{"file_id":"12967","success":1,"file_name":"ReadMe.txt","relation":"main_file","content_type":"text/plain","access_level":"open_access","date_updated":"2023-05-16T04:09:08Z","file_size":990,"date_created":"2023-05-16T04:09:08Z","checksum":"91f80a9fb58cae8eef2d8bf59fe30189","creator":"nbarton"}],"oa":1,"article_processing_charge":"No","fulldoi":"https://doi.org/10.15479/AT:ISTA:12949","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","contributor":[{"last_name":"Veber","first_name":"Amandine","contributor_type":"researcher"},{"last_name":"Etheridge","first_name":"Alison","contributor_type":"researcher"}],"abstract":[{"text":"The classical infinitesimal model is a simple and robust model for the inheritance of quantitative traits. In this model, a quantitative trait is expressed as the sum of a genetic and a non-genetic (environmental) component and the genetic component of offspring traits within a family follows a normal distribution around the average of the parents’ trait values, and has a variance that is independent of the trait values of the parents. Although the trait distribution across the whole population can be far from normal, the trait distributions within families are normally distributed with a variance-covariance matrix that is determined entirely by that in  the ancestral population and the probabilities of identity determined by the pedigree. Moreover, conditioning on some of the trait values within the pedigree has predictable effects on the mean and variance within and between families. In previous work, Barton et al. (2017), we showed that when trait values are determined by the sum of a large number of Mendelian factors, each  of small effect, one can justify the infinitesimal model as limit of Mendelian inheritance. It was also shown that under some forms of epistasis, trait values within a family are still normally distributed.","lang":"eng"}],"type":"research_data","author":[{"last_name":"Barton","first_name":"Nicholas H","orcid":"0000-0002-8548-5240","full_name":"Barton, Nicholas H","id":"4880FE40-F248-11E8-B48F-1D18A9856A87"}],"_id":"12949"},{"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"publisher":"Springer Nature","language":[{"iso":"eng"}],"date_created":"2023-05-14T22:01:00Z","oa_version":"Published Version","project":[{"grant_number":"716117","call_identifier":"H2020","_id":"256E75B8-B435-11E9-9278-68D0E5697425","name":"Optimal Transport and Stochastic Dynamics"},{"grant_number":"F6504","name":"Taming Complexity in Partial Differential Systems","_id":"fc31cba2-9c52-11eb-aca3-ff467d239cd2"},{"name":"Dissipation and dispersion in nonlinear partial differential equations","_id":"260788DE-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"W1245"}],"date_updated":"2025-05-15T10:54:12Z","pmid":1,"ddc":["510"],"title":"Homogenisation of dynamical optimal transport on periodic graphs","corr_author":"1","external_id":{"arxiv":["2110.15321"],"pmid":["37131846"],"isi":["000980588900001"]},"doi":"10.1007/s00526-023-02472-z","date_published":"2023-04-28T00:00:00Z","intvolume":"        62","citation":{"ieee":"P. Gladbach, E. Kopfer, J. Maas, and L. Portinale, “Homogenisation of dynamical optimal transport on periodic graphs,” <i>Calculus of Variations and Partial Differential Equations</i>, vol. 62, no. 5. Springer Nature, 2023.","mla":"Gladbach, Peter, et al. “Homogenisation of Dynamical Optimal Transport on Periodic Graphs.” <i>Calculus of Variations and Partial Differential Equations</i>, vol. 62, no. 5, 143, Springer Nature, 2023, doi:<a href=\"https://doi.org/10.1007/s00526-023-02472-z\">10.1007/s00526-023-02472-z</a>.","short":"P. Gladbach, E. Kopfer, J. Maas, L. Portinale, Calculus of Variations and Partial Differential Equations 62 (2023).","chicago":"Gladbach, Peter, Eva Kopfer, Jan Maas, and Lorenzo Portinale. “Homogenisation of Dynamical Optimal Transport on Periodic Graphs.” <i>Calculus of Variations and Partial Differential Equations</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1007/s00526-023-02472-z\">https://doi.org/10.1007/s00526-023-02472-z</a>.","apa":"Gladbach, P., Kopfer, E., Maas, J., &#38; Portinale, L. (2023). Homogenisation of dynamical optimal transport on periodic graphs. <i>Calculus of Variations and Partial Differential Equations</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00526-023-02472-z\">https://doi.org/10.1007/s00526-023-02472-z</a>","ama":"Gladbach P, Kopfer E, Maas J, Portinale L. Homogenisation of dynamical optimal transport on periodic graphs. <i>Calculus of Variations and Partial Differential Equations</i>. 2023;62(5). doi:<a href=\"https://doi.org/10.1007/s00526-023-02472-z\">10.1007/s00526-023-02472-z</a>","ista":"Gladbach P, Kopfer E, Maas J, Portinale L. 2023. Homogenisation of dynamical optimal transport on periodic graphs. Calculus of Variations and Partial Differential Equations. 62(5), 143."},"ec_funded":1,"status":"public","quality_controlled":"1","year":"2023","arxiv":1,"author":[{"last_name":"Gladbach","first_name":"Peter","full_name":"Gladbach, Peter"},{"full_name":"Kopfer, Eva","first_name":"Eva","last_name":"Kopfer"},{"first_name":"Jan","last_name":"Maas","id":"4C5696CE-F248-11E8-B48F-1D18A9856A87","full_name":"Maas, Jan","orcid":"0000-0002-0845-1338"},{"full_name":"Portinale, Lorenzo","id":"30AD2CBC-F248-11E8-B48F-1D18A9856A87","first_name":"Lorenzo","last_name":"Portinale"}],"_id":"12959","acknowledgement":"J.M. gratefully acknowledges support by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (Grant Agreement No. 716117). J.M and L.P. also acknowledge support from the Austrian Science Fund (FWF), grants No F65 and W1245. E.K. gratefully acknowledges support by the German Research Foundation through the Hausdorff Center for Mathematics and the Collaborative Research Center 1060. P.G. is partially funded by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation)—350398276. We thank the anonymous reviewer for the careful reading and for useful suggestions. Open access funding provided by Austrian Science Fund (FWF).","type":"journal_article","abstract":[{"lang":"eng","text":"This paper deals with the large-scale behaviour of dynamical optimal transport on Zd\r\n-periodic graphs with general lower semicontinuous and convex energy densities. Our main contribution is a homogenisation result that describes the effective behaviour of the discrete problems in terms of a continuous optimal transport problem. The effective energy density can be explicitly expressed in terms of a cell formula, which is a finite-dimensional convex programming problem that depends non-trivially on the local geometry of the discrete graph and the discrete energy density. Our homogenisation result is derived from a Γ\r\n-convergence result for action functionals on curves of measures, which we prove under very mild growth conditions on the energy density. We investigate the cell formula in several cases of interest, including finite-volume discretisations of the Wasserstein distance, where non-trivial limiting behaviour occurs."}],"publication_identifier":{"issn":["0944-2669"],"eissn":["1432-0835"]},"volume":62,"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","fulldoi":"https://doi.org/10.1007/s00526-023-02472-z","scopus_import":"1","article_processing_charge":"Yes (via OA deal)","isi":1,"publication":"Calculus of Variations and Partial Differential Equations","file":[{"relation":"main_file","file_name":"2023_CalculusEquations_Gladbach.pdf","success":1,"file_id":"14393","checksum":"359bee38d94b7e0aa73925063cb8884d","creator":"dernst","date_updated":"2023-10-04T11:34:10Z","file_size":1240995,"content_type":"application/pdf","access_level":"open_access","date_created":"2023-10-04T11:34:10Z"}],"file_date_updated":"2023-10-04T11:34:10Z","oa":1,"article_type":"original","article_number":"143","publication_status":"published","department":[{"_id":"JaMa"}],"issue":"5","month":"04","day":"28","has_accepted_license":"1"},{"type":"journal_article","abstract":[{"lang":"eng","text":"Two notes separated by a doubling in frequency sound similar to humans. This “octave equivalence” is critical to perception and production of music and speech and occurs early in human development. Because it also occurs cross-culturally, a biological basis of octave equivalence has been hypothesized. Members of our team previousy suggested four human traits are at the root of this phenomenon: (1) vocal learning, (2) clear octave information in vocal harmonics, (3) differing vocal ranges, and (4) vocalizing together. Using cross-species studies, we can test how relevant these respective traits are, while controlling for enculturation effects and addressing questions of phylogeny. Common marmosets possess forms of three of the four traits, lacking differing vocal ranges. We tested 11 common marmosets by adapting an established head-turning paradigm, creating a parallel test to an important infant study. Unlike human infants, marmosets responded similarly to tones shifted by an octave or other intervals. Because previous studies with the same head-turning paradigm produced differential results to discernable acoustic stimuli in common marmosets, our results suggest that marmosets do not perceive octave equivalence. Our work suggests differing vocal ranges between adults and children and men and women and the way they are used in singing together may be critical to the development of octave equivalence."}],"_id":"12961","acknowledgement":"We thank Prof. Dr. Thomas Bugnyar for supporting the study and financing the marmoset laboratory, and Alexandra Bohmann and the animal keeping team for their care. Vedrana Šlipogor was funded by University of South Bohemia postdoctoral fellowship.","author":[{"first_name":"Bernhard","last_name":"Wagner","full_name":"Wagner, Bernhard"},{"full_name":"Šlipogor, Vedrana","last_name":"Šlipogor","first_name":"Vedrana"},{"first_name":"Jinook","last_name":"Oh","full_name":"Oh, Jinook","id":"403169A4-080F-11EA-9993-BF3F3DDC885E","orcid":"0000-0001-7425-2372"},{"full_name":"Varga, Marion","first_name":"Marion","last_name":"Varga"},{"first_name":"Marisa","last_name":"Hoeschele","full_name":"Hoeschele, Marisa"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":26,"publication_identifier":{"eissn":["1467-7687"],"issn":["1363-755X"]},"article_number":"e13395","article_type":"original","scopus_import":"1","fulldoi":"https://doi.org/10.1111/desc.13395","publication":"Developmental Science","article_processing_charge":"No","month":"09","day":"01","issue":"5","department":[{"_id":"SyCr"}],"publication_status":"published","language":[{"iso":"eng"}],"publisher":"Wiley","title":"A comparison between common marmosets (Callithrix jacchus) and human infants sheds light on traits proposed to be at the root of human octave equivalence","external_id":{"pmid":["37101383"]},"date_published":"2023-09-01T00:00:00Z","doi":"10.1111/desc.13395","date_created":"2023-05-14T22:01:00Z","oa_version":"None","pmid":1,"date_updated":"2023-10-04T11:37:33Z","citation":{"ama":"Wagner B, Šlipogor V, Oh J, Varga M, Hoeschele M. A comparison between common marmosets (Callithrix jacchus) and human infants sheds light on traits proposed to be at the root of human octave equivalence. <i>Developmental Science</i>. 2023;26(5). doi:<a href=\"https://doi.org/10.1111/desc.13395\">10.1111/desc.13395</a>","apa":"Wagner, B., Šlipogor, V., Oh, J., Varga, M., &#38; Hoeschele, M. (2023). A comparison between common marmosets (Callithrix jacchus) and human infants sheds light on traits proposed to be at the root of human octave equivalence. <i>Developmental Science</i>. Wiley. <a href=\"https://doi.org/10.1111/desc.13395\">https://doi.org/10.1111/desc.13395</a>","chicago":"Wagner, Bernhard, Vedrana Šlipogor, Jinook Oh, Marion Varga, and Marisa Hoeschele. “A Comparison between Common Marmosets (Callithrix Jacchus) and Human Infants Sheds Light on Traits Proposed to Be at the Root of Human Octave Equivalence.” <i>Developmental Science</i>. Wiley, 2023. <a href=\"https://doi.org/10.1111/desc.13395\">https://doi.org/10.1111/desc.13395</a>.","short":"B. Wagner, V. Šlipogor, J. Oh, M. Varga, M. Hoeschele, Developmental Science 26 (2023).","mla":"Wagner, Bernhard, et al. “A Comparison between Common Marmosets (Callithrix Jacchus) and Human Infants Sheds Light on Traits Proposed to Be at the Root of Human Octave Equivalence.” <i>Developmental Science</i>, vol. 26, no. 5, e13395, Wiley, 2023, doi:<a href=\"https://doi.org/10.1111/desc.13395\">10.1111/desc.13395</a>.","ieee":"B. Wagner, V. Šlipogor, J. Oh, M. Varga, and M. Hoeschele, “A comparison between common marmosets (Callithrix jacchus) and human infants sheds light on traits proposed to be at the root of human octave equivalence,” <i>Developmental Science</i>, vol. 26, no. 5. Wiley, 2023.","ista":"Wagner B, Šlipogor V, Oh J, Varga M, Hoeschele M. 2023. A comparison between common marmosets (Callithrix jacchus) and human infants sheds light on traits proposed to be at the root of human octave equivalence. Developmental Science. 26(5), e13395."},"intvolume":"        26","year":"2023","quality_controlled":"1","status":"public"},{"publication_identifier":{"issn":["1467-8659"]},"page":"397-409","volume":42,"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","_id":"12972","acknowledgement":"This work was supported by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation program (grant agreement No 715767 – MATERIALIZABLE), and FWF Lise Meitner (Grant M 3319). We thank the anonymous reviewers for their insightful feedback; Solal Pirelli, Shardul Chiplunkar, and Paola Mejia for proofreading; everyone in the visual computing group at ISTA for inspiring lunch and coffee breaks; Thibault Tricard for help producing the results of Phasor Noise.","author":[{"orcid":"0000-0001-9200-5690","id":"70f0d7cf-ae65-11ec-a14f-89dfc5505b19","full_name":"Liu, Zhenyuan","last_name":"Liu","first_name":"Zhenyuan"},{"last_name":"Piovarci","first_name":"Michael","full_name":"Piovarci, Michael","id":"62E473F4-5C99-11EA-A40E-AF823DDC885E","orcid":"0000-0002-5062-4474"},{"full_name":"Hafner, Christian","id":"400429CC-F248-11E8-B48F-1D18A9856A87","first_name":"Christian","last_name":"Hafner"},{"id":"a3a24133-2cc7-11ec-be88-8ddaf6f464b1","full_name":"Charrondiere, Raphael","first_name":"Raphael","last_name":"Charrondiere"},{"last_name":"Bickel","first_name":"Bernd","orcid":"0000-0001-6511-9385","full_name":"Bickel, Bernd","id":"49876194-F248-11E8-B48F-1D18A9856A87"}],"type":"journal_article","abstract":[{"text":"Embroidery is a long-standing and high-quality approach to making logos and images on textiles. Nowadays, it can also be performed via automated machines that weave threads with high spatial accuracy. A characteristic feature of the appearance of the threads is a high degree of anisotropy. The anisotropic behavior is caused by depositing thin but long strings of thread. As a result, the stitched patterns convey both color and direction. Artists leverage this anisotropic behavior to enhance pure color images with textures, illusions of motion, or depth cues. However, designing colorful embroidery patterns with prescribed directionality is a challenging task, one usually requiring an expert designer. In this work, we propose an interactive algorithm that generates machine-fabricable embroidery patterns from multi-chromatic images equipped with user-specified directionality fields.We cast the problem of finding a stitching pattern into vector theory. To find a suitable stitching pattern, we extract sources and sinks from the divergence field of the vector field extracted from the input and use them to trace streamlines. We further optimize the streamlines to guarantee a smooth and connected stitching pattern. The generated patterns approximate the color distribution constrained by the directionality field. To allow for further artistic control, the trade-off between color match and directionality match can be interactively explored via an intuitive slider. We showcase our approach by fabricating several embroidery paths.","lang":"eng"}],"publication_status":"published","department":[{"_id":"BeBi"}],"issue":"2","day":"08","month":"05","has_accepted_license":"1","scopus_import":"1","fulldoi":"https://doi.org/10.1111/cgf.14770 ","article_processing_charge":"No","publication":"Computer Graphics Forum","isi":1,"file_date_updated":"2023-05-16T08:28:37Z","file":[{"date_created":"2023-05-16T08:28:37Z","access_level":"open_access","content_type":"application/pdf","file_size":24003702,"date_updated":"2023-05-16T08:28:37Z","checksum":"4c188c2be4745467a8790bbf5d6491aa","creator":"mpiovarc","success":1,"file_id":"12974","file_name":"Zhenyuan2023.pdf","relation":"main_file"}],"oa":1,"article_type":"original","date_created":"2023-05-16T08:47:25Z","oa_version":"Published Version","project":[{"grant_number":"M03319","name":"Perception-Aware Appearance Fabrication","_id":"eb901961-77a9-11ec-83b8-f5c883a62027"},{"grant_number":"715767","name":"MATERIALIZABLE: Intelligent fabrication-oriented Computational Design and Modeling","call_identifier":"H2020","_id":"24F9549A-B435-11E9-9278-68D0E5697425"}],"keyword":["embroidery","design","directionality","density","image"],"date_updated":"2025-04-14T07:28:57Z","ddc":["004"],"external_id":{"isi":["001000062600033"]},"title":"Directionality-aware design of embroidery patterns","corr_author":"1","doi":"10.1111/cgf.14770 ","date_published":"2023-05-08T00:00:00Z","conference":{"name":"EG: Eurographics","end_date":"2023-05-12","start_date":"2023-05-08","location":"Saarbrucken, Germany"},"tmp":{"short":"CC BY-NC-ND (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png"},"publisher":"Wiley","language":[{"iso":"eng"}],"ec_funded":1,"quality_controlled":"1","status":"public","year":"2023","intvolume":"        42","citation":{"ista":"Liu Z, Piovarci M, Hafner C, Charrondiere R, Bickel B. 2023. Directionality-aware design of embroidery patterns. Computer Graphics Forum. 42(2), 397–409.","chicago":"Liu, Zhenyuan, Michael Piovarci, Christian Hafner, Raphael Charrondiere, and Bernd Bickel. “Directionality-Aware Design of Embroidery Patterns.” <i>Computer Graphics Forum</i>. Wiley, 2023. <a href=\"https://doi.org/10.1111/cgf.14770 \">https://doi.org/10.1111/cgf.14770 </a>.","short":"Z. Liu, M. Piovarci, C. Hafner, R. Charrondiere, B. Bickel, Computer Graphics Forum 42 (2023) 397–409.","ieee":"Z. Liu, M. Piovarci, C. Hafner, R. Charrondiere, and B. Bickel, “Directionality-aware design of embroidery patterns,” <i>Computer Graphics Forum</i>, vol. 42, no. 2. Wiley, pp. 397–409, 2023.","mla":"Liu, Zhenyuan, et al. “Directionality-Aware Design of Embroidery Patterns.” <i>Computer Graphics Forum</i>, vol. 42, no. 2, Wiley, 2023, pp. 397–409, doi:<a href=\"https://doi.org/10.1111/cgf.14770 \">10.1111/cgf.14770 </a>.","ama":"Liu Z, Piovarci M, Hafner C, Charrondiere R, Bickel B. Directionality-aware design of embroidery patterns. <i>Computer Graphics Forum</i>. 2023;42(2):397-409. doi:<a href=\"https://doi.org/10.1111/cgf.14770 \">10.1111/cgf.14770 </a>","apa":"Liu, Z., Piovarci, M., Hafner, C., Charrondiere, R., &#38; Bickel, B. (2023). Directionality-aware design of embroidery patterns. <i>Computer Graphics Forum</i>. Saarbrucken, Germany: Wiley. <a href=\"https://doi.org/10.1111/cgf.14770 \">https://doi.org/10.1111/cgf.14770 </a>"}},{"keyword":["reinforcement learning","deposition","control","color","multi-filament"],"project":[{"grant_number":"M03319","_id":"eb901961-77a9-11ec-83b8-f5c883a62027","name":"Perception-Aware Appearance Fabrication"}],"date_created":"2023-05-16T09:14:09Z","oa_version":"Submitted Version","ddc":["004"],"date_updated":"2025-04-15T07:43:52Z","external_id":{"isi":["001048371104068"]},"title":"Learning deposition policies for fused multi-material 3D printing","date_published":"2023-07-04T00:00:00Z","doi":"10.1109/ICRA48891.2023.10160465","conference":{"name":"ICRA: International Conference on Robotics and Automation","end_date":"2023-06-02","start_date":"2023-05-29","location":"London, United Kingdom"},"language":[{"iso":"eng"}],"publisher":"IEEE","quality_controlled":"1","status":"public","year":"2023","intvolume":"      2023","citation":{"ieee":"K. Liao, T. Tricard, M. Piovarci, H.-P. Seidel, and V. Babaei, “Learning deposition policies for fused multi-material 3D printing,” in <i>2023 IEEE International Conference on Robotics and Automation</i>, London, United Kingdom, 2023, vol. 2023, pp. 12345–12352.","mla":"Liao, Kang, et al. “Learning Deposition Policies for Fused Multi-Material 3D Printing.” <i>2023 IEEE International Conference on Robotics and Automation</i>, vol. 2023, IEEE, 2023, pp. 12345–52, doi:<a href=\"https://doi.org/10.1109/ICRA48891.2023.10160465\">10.1109/ICRA48891.2023.10160465</a>.","short":"K. Liao, T. Tricard, M. Piovarci, H.-P. Seidel, V. Babaei, in:, 2023 IEEE International Conference on Robotics and Automation, IEEE, 2023, pp. 12345–12352.","chicago":"Liao, Kang, Thibault Tricard, Michael Piovarci, Hans-Peter Seidel, and Vahid Babaei. “Learning Deposition Policies for Fused Multi-Material 3D Printing.” In <i>2023 IEEE International Conference on Robotics and Automation</i>, 2023:12345–52. IEEE, 2023. <a href=\"https://doi.org/10.1109/ICRA48891.2023.10160465\">https://doi.org/10.1109/ICRA48891.2023.10160465</a>.","apa":"Liao, K., Tricard, T., Piovarci, M., Seidel, H.-P., &#38; Babaei, V. (2023). Learning deposition policies for fused multi-material 3D printing. In <i>2023 IEEE International Conference on Robotics and Automation</i> (Vol. 2023, pp. 12345–12352). London, United Kingdom: IEEE. <a href=\"https://doi.org/10.1109/ICRA48891.2023.10160465\">https://doi.org/10.1109/ICRA48891.2023.10160465</a>","ama":"Liao K, Tricard T, Piovarci M, Seidel H-P, Babaei V. Learning deposition policies for fused multi-material 3D printing. In: <i>2023 IEEE International Conference on Robotics and Automation</i>. Vol 2023. IEEE; 2023:12345-12352. doi:<a href=\"https://doi.org/10.1109/ICRA48891.2023.10160465\">10.1109/ICRA48891.2023.10160465</a>","ista":"Liao K, Tricard T, Piovarci M, Seidel H-P, Babaei V. 2023. Learning deposition policies for fused multi-material 3D printing. 2023 IEEE International Conference on Robotics and Automation. ICRA: International Conference on Robotics and Automation vol. 2023, 12345–12352."},"volume":2023,"page":"12345-12352","publication_identifier":{"issn":["1050-4729"],"eisbn":["9798350323658"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"12976","author":[{"full_name":"Liao, Kang","first_name":"Kang","last_name":"Liao"},{"first_name":"Thibault","last_name":"Tricard","full_name":"Tricard, Thibault"},{"first_name":"Michael","last_name":"Piovarci","orcid":"0000-0002-5062-4474","full_name":"Piovarci, Michael","id":"62E473F4-5C99-11EA-A40E-AF823DDC885E"},{"full_name":"Seidel, Hans-Peter","first_name":"Hans-Peter","last_name":"Seidel"},{"full_name":"Babaei, Vahid","first_name":"Vahid","last_name":"Babaei"}],"acknowledgement":"This work is graciously supported by FWF Lise Meitner (Grant M 3319). Kang Liao sincerely thank Emiliano Luci, Chunyu Lin, and Yao Zhao for their huge support.","type":"conference","abstract":[{"lang":"eng","text":"3D printing based on continuous deposition of materials, such as filament-based 3D printing, has seen widespread adoption thanks to its versatility in working with a wide range of materials. An important shortcoming of this type of technology is its limited multi-material capabilities. While there are simple hardware designs that enable multi-material printing in principle, the required software is heavily underdeveloped. A typical hardware design fuses together individual materials fed into a single chamber from multiple inlets before they are deposited. This design, however, introduces a time delay between the intended material mixture and its actual deposition. In this work, inspired by diverse path planning research in robotics, we show that this mechanical challenge can be addressed via improved printer control. We propose to formulate the search for optimal multi-material printing policies in a reinforcement\r\nlearning setup. We put forward a simple numerical deposition model that takes into account the non-linear material mixing and delayed material deposition. To validate our system we focus on color fabrication, a problem known for its strict requirements for varying material mixtures at a high spatial frequency. We demonstrate that our learned control policy outperforms state-of-the-art hand-crafted algorithms."}],"department":[{"_id":"BeBi"}],"publication_status":"published","has_accepted_license":"1","day":"04","month":"07","fulldoi":"https://doi.org/10.1109/ICRA48891.2023.10160465","scopus_import":"1","isi":1,"publication":"2023 IEEE International Conference on Robotics and Automation","article_processing_charge":"No","oa":1,"file":[{"content_type":"application/pdf","access_level":"open_access","date_updated":"2023-05-16T09:12:05Z","file_size":5367986,"date_created":"2023-05-16T09:12:05Z","checksum":"daeaa67124777d88487f933ea3f77164","creator":"mpiovarc","success":1,"file_id":"12977","file_name":"Liao2023.pdf","relation":"main_file"}],"file_date_updated":"2023-05-16T09:12:05Z"},{"citation":{"ama":"Condor J, Piovarci M, Bickel B, Didyk P. Gloss-aware color correction for 3D printing. In: <i>SIGGRAPH ’23 Conference Proceedings</i>. Association for Computing Machinery; 2023. doi:<a href=\"https://doi.org/10.1145/3588432.3591546\">10.1145/3588432.3591546</a>","apa":"Condor, J., Piovarci, M., Bickel, B., &#38; Didyk, P. (2023). Gloss-aware color correction for 3D printing. In <i>SIGGRAPH ’23 Conference Proceedings</i>. Los Angeles, CA, United States: Association for Computing Machinery. <a href=\"https://doi.org/10.1145/3588432.3591546\">https://doi.org/10.1145/3588432.3591546</a>","short":"J. Condor, M. Piovarci, B. Bickel, P. Didyk, in:, SIGGRAPH ’23 Conference Proceedings, Association for Computing Machinery, 2023.","chicago":"Condor, Jorge, Michael Piovarci, Bernd Bickel, and Piotr Didyk. “Gloss-Aware Color Correction for 3D Printing.” In <i>SIGGRAPH ’23 Conference Proceedings</i>. Association for Computing Machinery, 2023. <a href=\"https://doi.org/10.1145/3588432.3591546\">https://doi.org/10.1145/3588432.3591546</a>.","ieee":"J. Condor, M. Piovarci, B. Bickel, and P. Didyk, “Gloss-aware color correction for 3D printing,” in <i>SIGGRAPH ’23 Conference Proceedings</i>, Los Angeles, CA, United States, 2023.","mla":"Condor, Jorge, et al. “Gloss-Aware Color Correction for 3D Printing.” <i>SIGGRAPH ’23 Conference Proceedings</i>, 21, Association for Computing Machinery, 2023, doi:<a href=\"https://doi.org/10.1145/3588432.3591546\">10.1145/3588432.3591546</a>.","ista":"Condor J, Piovarci M, Bickel B, Didyk P. 2023. Gloss-aware color correction for 3D printing. SIGGRAPH ’23 Conference Proceedings. SIGGRAPH: Computer Graphics and Interactive Techniques Conference, 21."},"year":"2023","status":"public","quality_controlled":"1","language":[{"iso":"eng"}],"publisher":"Association for Computing Machinery","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"conference":{"start_date":"2023-08-06","location":"Los Angeles, CA, United States","name":"SIGGRAPH: Computer Graphics and Interactive Techniques Conference","end_date":"2023-08-10"},"date_published":"2023-07-23T00:00:00Z","doi":"10.1145/3588432.3591546","external_id":{"isi":["001117690500021"]},"title":"Gloss-aware color correction for 3D printing","corr_author":"1","ddc":["004"],"date_updated":"2025-04-15T07:43:53Z","project":[{"grant_number":"M03319","_id":"eb901961-77a9-11ec-83b8-f5c883a62027","name":"Perception-Aware Appearance Fabrication"}],"keyword":["color","gloss","perception","color compensation","color management"],"oa_version":"Published Version","date_created":"2023-05-16T09:34:13Z","article_number":"21","oa":1,"file":[{"relation":"main_file","file_name":"Condor2023_supplemental.pdf","file_id":"12983","success":1,"checksum":"84a437739af5d46507928939b20c0c28","creator":"mpiovarc","file_size":42323971,"date_updated":"2023-05-16T09:32:50Z","access_level":"open_access","content_type":"application/pdf","date_created":"2023-05-16T09:32:50Z"},{"date_created":"2024-01-29T10:14:10Z","file_size":26079404,"date_updated":"2024-01-29T10:14:10Z","access_level":"open_access","content_type":"application/pdf","creator":"dernst","checksum":"0f5c8b242e8e7c153c04888c4d0c6f37","success":1,"file_id":"14893","relation":"main_file","file_name":"2023_Siggraph_Condor.pdf"}],"file_date_updated":"2024-01-29T10:14:10Z","isi":1,"publication":"SIGGRAPH ’23 Conference Proceedings","article_processing_charge":"Yes (via OA deal)","scopus_import":"1","fulldoi":"https://doi.org/10.1145/3588432.3591546","has_accepted_license":"1","day":"23","month":"07","publication_status":"published","department":[{"_id":"BeBi"}],"abstract":[{"text":"Color and gloss are fundamental aspects of surface appearance. State-of-the-art fabrication techniques can manipulate both properties of the printed 3D objects. However, in the context of appearance reproduction, perceptual aspects of color and gloss are usually handled separately, even though previous perceptual studies suggest their interaction. Our work is motivated by previous studies demonstrating a perceived color shift due to a change in the object's gloss, i.e., two samples with the same color but different surface gloss appear as they have different colors. In this paper, we conduct new experiments which support this observation and provide insights into the magnitude and direction of the perceived color change. We use the observations as guidance to design a new method that estimates and corrects the color shift enabling the fabrication of objects with the same perceived color but different surface gloss. We formulate the problem as an optimization procedure solved using differentiable rendering. We evaluate the effectiveness of our method in perceptual experiments with 3D objects fabricated using a multi-material 3D printer and demonstrate potential applications. ","lang":"eng"}],"type":"conference","_id":"12979","author":[{"full_name":"Condor, Jorge","first_name":"Jorge","last_name":"Condor"},{"first_name":"Michael","last_name":"Piovarci","orcid":"0000-0002-5062-4474","id":"62E473F4-5C99-11EA-A40E-AF823DDC885E","full_name":"Piovarci, Michael"},{"full_name":"Bickel, Bernd","id":"49876194-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-6511-9385","last_name":"Bickel","first_name":"Bernd"},{"full_name":"Didyk, Piotr","last_name":"Didyk","first_name":"Piotr"}],"acknowledgement":"We thank Matthew S Zurawski for the 3D model of the car speed shape. This research has been supported by the Swiss National Science Foundation (SNSF, Grant 200502) and the FWF Lise Meitner (Grant M 3319).","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","publication_identifier":{"isbn":["9798400701597"]}},{"intvolume":"        42","citation":{"ama":"Piovarci M, Chapiro A, Bickel B. Skin-Screen: A computational fabrication framework for color tattoos. <i>ACM Transactions on Graphics</i>. 2023;42(4). doi:<a href=\"https://doi.org/10.1145/3592432\">10.1145/3592432</a>","apa":"Piovarci, M., Chapiro, A., &#38; Bickel, B. (2023). Skin-Screen: A computational fabrication framework for color tattoos. <i>ACM Transactions on Graphics</i>. Los Angeles, CA, United States: Association for Computing Machinery. <a href=\"https://doi.org/10.1145/3592432\">https://doi.org/10.1145/3592432</a>","short":"M. Piovarci, A. Chapiro, B. Bickel, ACM Transactions on Graphics 42 (2023).","chicago":"Piovarci, Michael, Alexandre Chapiro, and Bernd Bickel. “Skin-Screen: A Computational Fabrication Framework for Color Tattoos.” <i>ACM Transactions on Graphics</i>. Association for Computing Machinery, 2023. <a href=\"https://doi.org/10.1145/3592432\">https://doi.org/10.1145/3592432</a>.","ieee":"M. Piovarci, A. Chapiro, and B. Bickel, “Skin-Screen: A computational fabrication framework for color tattoos,” <i>ACM Transactions on Graphics</i>, vol. 42, no. 4. Association for Computing Machinery, 2023.","mla":"Piovarci, Michael, et al. “Skin-Screen: A Computational Fabrication Framework for Color Tattoos.” <i>ACM Transactions on Graphics</i>, vol. 42, no. 4, 67, Association for Computing Machinery, 2023, doi:<a href=\"https://doi.org/10.1145/3592432\">10.1145/3592432</a>.","ista":"Piovarci M, Chapiro A, Bickel B. 2023. Skin-Screen: A computational fabrication framework for color tattoos. ACM Transactions on Graphics. 42(4), 67."},"status":"public","quality_controlled":"1","year":"2023","conference":{"end_date":"2023-08-10","name":"SIGGRAPH: Computer Graphics and Interactive Techniques Conference","location":"Los Angeles, CA, United States","start_date":"2023-08-06"},"publisher":"Association for Computing Machinery","language":[{"iso":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"date_updated":"2025-04-15T07:43:53Z","ddc":["004"],"date_created":"2023-05-16T09:39:14Z","oa_version":"Published Version","project":[{"grant_number":"M03319","name":"Perception-Aware Appearance Fabrication","_id":"eb901961-77a9-11ec-83b8-f5c883a62027"}],"keyword":["appearance","modeling","reproduction","tattoo","skin color","gamut mapping","ink-optimization","prosthetic"],"doi":"10.1145/3592432","date_published":"2023-07-26T00:00:00Z","external_id":{"isi":["001044671300033"]},"title":"Skin-Screen: A computational fabrication framework for color tattoos","corr_author":"1","article_processing_charge":"Yes (via OA deal)","isi":1,"publication":"ACM Transactions on Graphics","scopus_import":"1","fulldoi":"https://doi.org/10.1145/3592432","article_type":"original","article_number":"67","file_date_updated":"2024-04-16T05:52:18Z","file":[{"file_id":"12985","success":1,"file_name":"Piovarci2023.pdf","relation":"main_file","content_type":"application/pdf","access_level":"open_access","date_updated":"2023-05-16T09:38:25Z","file_size":30817343,"date_created":"2023-05-16T09:38:25Z","checksum":"5f0a6867689e025a661bd0b4fd90b821","creator":"mpiovarc"},{"success":1,"file_id":"15324","file_name":"2023_ACM_Piovarci.pdf","relation":"main_file","access_level":"open_access","content_type":"application/pdf","file_size":30281676,"date_updated":"2024-04-16T05:52:18Z","date_created":"2024-04-16T05:52:18Z","checksum":"6dd371de5b517e5f184f9c2cbea4b8b3","creator":"dernst"}],"oa":1,"publication_status":"published","department":[{"_id":"BeBi"}],"issue":"4","month":"07","day":"26","has_accepted_license":"1","_id":"12984","acknowledgement":"We thank Todor Asenov and the Miba Machine Shop for their help in assembling the tattoo machine and manufacturing the substrates. We thank Geysler Rodrigues for the insightful discussions on tattooing practices from a professional artist's perspective. We thank Maria Fernanda Portugal for sharing a doctor's perspective on medical applications of tattoos. This work is graciously supported by the FWF Lise Meitner (Grant M 3319).","author":[{"first_name":"Michael","last_name":"Piovarci","id":"62E473F4-5C99-11EA-A40E-AF823DDC885E","full_name":"Piovarci, Michael","orcid":"0000-0002-5062-4474"},{"last_name":"Chapiro","first_name":"Alexandre","full_name":"Chapiro, Alexandre"},{"first_name":"Bernd","last_name":"Bickel","id":"49876194-F248-11E8-B48F-1D18A9856A87","full_name":"Bickel, Bernd","orcid":"0000-0001-6511-9385"}],"abstract":[{"text":"Tattoos are a highly popular medium, with both artistic and medical applications. Although the mechanical process of tattoo application has evolved historically, the results are reliant on the artisanal skill of the artist. This can be especially challenging for some skin tones, or in cases where artists lack experience. We provide the first systematic overview of tattooing as a computational fabrication technique. We built an automated tattooing rig and a recipe for the creation of silicone sheets mimicking realistic skin tones, which allowed us to create an accurate model predicting tattoo appearance. This enables several exciting applications including tattoo previewing, color retargeting, novel ink spectra optimization, color-accurate prosthetics, and more.","lang":"eng"}],"type":"journal_article","publication_identifier":{"issn":["0730-0301"],"eissn":["1557-7368"]},"volume":42,"acknowledged_ssus":[{"_id":"M-Shop"}],"user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87"},{"citation":{"ieee":"A. Zavadakova, L. Vistejnova, T. Belinova, F. Tichanek, D. Bilikova, and P. R. Mouton, “Novel stereological method for estimation of cell counts in 3D collagen scaffolds,” <i>Scientific Reports</i>, vol. 13, no. 1. Springer Nature, 2023.","mla":"Zavadakova, Anna, et al. “Novel Stereological Method for Estimation of Cell Counts in 3D Collagen Scaffolds.” <i>Scientific Reports</i>, vol. 13, no. 1, 7959, Springer Nature, 2023, doi:<a href=\"https://doi.org/10.1038/s41598-023-35162-z\">10.1038/s41598-023-35162-z</a>.","chicago":"Zavadakova, Anna, Lucie Vistejnova, Tereza Belinova, Filip Tichanek, Dagmar Bilikova, and Peter R. Mouton. “Novel Stereological Method for Estimation of Cell Counts in 3D Collagen Scaffolds.” <i>Scientific Reports</i>. Springer Nature, 2023. <a href=\"https://doi.org/10.1038/s41598-023-35162-z\">https://doi.org/10.1038/s41598-023-35162-z</a>.","short":"A. Zavadakova, L. Vistejnova, T. Belinova, F. Tichanek, D. Bilikova, P.R. Mouton, Scientific Reports 13 (2023).","apa":"Zavadakova, A., Vistejnova, L., Belinova, T., Tichanek, F., Bilikova, D., &#38; Mouton, P. R. (2023). Novel stereological method for estimation of cell counts in 3D collagen scaffolds. <i>Scientific Reports</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41598-023-35162-z\">https://doi.org/10.1038/s41598-023-35162-z</a>","ama":"Zavadakova A, Vistejnova L, Belinova T, Tichanek F, Bilikova D, Mouton PR. Novel stereological method for estimation of cell counts in 3D collagen scaffolds. <i>Scientific Reports</i>. 2023;13(1). doi:<a href=\"https://doi.org/10.1038/s41598-023-35162-z\">10.1038/s41598-023-35162-z</a>","ista":"Zavadakova A, Vistejnova L, Belinova T, Tichanek F, Bilikova D, Mouton PR. 2023. Novel stereological method for estimation of cell counts in 3D collagen scaffolds. Scientific Reports. 13(1), 7959."},"intvolume":"        13","year":"2023","status":"public","quality_controlled":"1","language":[{"iso":"eng"}],"publisher":"Springer Nature","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"related_material":{"link":[{"relation":"erratum","url":"https://doi.org/10.1038/s41598-023-37265-z"}]},"doi":"10.1038/s41598-023-35162-z","date_published":"2023-05-17T00:00:00Z","title":"Novel stereological method for estimation of cell counts in 3D collagen scaffolds","external_id":{"isi":["000995271600104"],"pmid":["37198326"]},"date_updated":"2025-04-23T08:56:48Z","pmid":1,"ddc":["570"],"date_created":"2023-05-19T11:12:25Z","oa_version":"Published Version","keyword":["Multidisciplinary"],"article_type":"original","article_number":"7959","file_date_updated":"2023-05-22T07:57:37Z","file":[{"success":1,"file_id":"13047","file_name":"2023_ScientificReports_Zavadakova.pdf","relation":"main_file","date_created":"2023-05-22T07:57:37Z","access_level":"open_access","content_type":"application/pdf","file_size":3055077,"date_updated":"2023-05-22T07:57:37Z","creator":"dernst","checksum":"8c1b769693ff4288df8376e59ad1176d"}],"oa":1,"article_processing_charge":"No","publication":"Scientific Reports","isi":1,"fulldoi":"https://doi.org/10.1038/s41598-023-35162-z","scopus_import":"1","day":"17","month":"05","has_accepted_license":"1","publication_status":"published","department":[{"_id":"Bio"}],"issue":"1","abstract":[{"text":"Current methods for assessing cell proliferation in 3D scaffolds rely on changes in metabolic activity or total DNA, however, direct quantification of cell number in 3D scaffolds remains a challenge. To address this issue, we developed an unbiased stereology approach that uses systematic-random sampling and thin focal-plane optical sectioning of the scaffolds followed by estimation of total cell number (StereoCount). This approach was validated against an indirect method for measuring the total DNA (DNA content); and the Bürker counting chamber, the current reference method for quantifying cell number. We assessed the total cell number for cell seeding density (cells per unit volume) across four values and compared the methods in terms of accuracy, ease-of-use and time demands. The accuracy of StereoCount markedly outperformed the DNA content for cases with ~ 10,000 and ~ 125,000 cells/scaffold. For cases with ~ 250,000 and ~ 375,000 cells/scaffold both StereoCount and DNA content showed lower accuracy than the Bürker but did not differ from each other. In terms of ease-of-use, there was a strong advantage for the StereoCount due to output in terms of absolute cell numbers along with the possibility for an overview of cell distribution and future use of automation for high throughput analysis. Taking together, the StereoCount method is an efficient approach for direct cell quantification in 3D collagen scaffolds. Its major benefit is that automated StereoCount could accelerate research using 3D scaffolds focused on drug discovery for a wide variety of human diseases.","lang":"eng"}],"type":"journal_article","_id":"13033","author":[{"full_name":"Zavadakova, Anna","last_name":"Zavadakova","first_name":"Anna"},{"full_name":"Vistejnova, Lucie","first_name":"Lucie","last_name":"Vistejnova"},{"first_name":"Tereza","last_name":"Belinova","full_name":"Belinova, Tereza","id":"0bf89b6a-d28b-11eb-8bd6-f43768e4d368"},{"full_name":"Tichanek, Filip","first_name":"Filip","last_name":"Tichanek"},{"full_name":"Bilikova, Dagmar","last_name":"Bilikova","first_name":"Dagmar"},{"full_name":"Mouton, Peter R.","last_name":"Mouton","first_name":"Peter R."}],"acknowledgement":"The study was supported by Project No. CZ.02.1.01/0.0/0.0/16_019/0000787 “Fighting INfectious Diseases”, awarded by the MEYS CR, financed from EFRR, by the Cooperatio Program, research area DIAG and research area MED/DIAG, by the profiBONE project (TO01000309) benefitting from a € (1.433.000) grant from Iceland, Liechtenstein and Norway through the EEA Grants and the Technology Agency of the Czech Republic and by a Grant (#1926990) to PRM and SRC Biosciences from the National Science Foundation (U.S. Public Health Service). The authors acknowledge the invaluable assistance provided by Iveta Paurova via her support in terms of the provision of laboratory services.","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_identifier":{"issn":["2045-2322"]},"volume":13},{"month":"07","day":"06","has_accepted_license":"1","department":[{"_id":"StFr"}],"publication_status":"published","issue":"13","file_date_updated":"2023-11-14T11:27:16Z","file":[{"creator":"dernst","checksum":"efa0713289995af83a2147b3e8e1d6a6","access_level":"open_access","content_type":"application/pdf","file_size":1168683,"date_updated":"2023-11-14T11:27:16Z","date_created":"2023-11-14T11:27:16Z","file_name":"2023_ChemSusChem_Farag.pdf","relation":"main_file","file_id":"14532","success":1}],"oa":1,"article_type":"original","article_number":"e202300128","scopus_import":"1","fulldoi":"https://doi.org/10.1002/cssc.202300128","article_processing_charge":"Yes (in subscription journal)","isi":1,"publication":"ChemSusChem","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_identifier":{"issn":["1864-5631"],"eissn":["1864-564X"]},"volume":16,"type":"journal_article","abstract":[{"lang":"eng","text":"A series of triarylamines was synthesised and screened for their suitability as catholytes in redox flow batteries using cyclic voltammetry (CV). Tris(4-aminophenyl)amine was found to be the strongest candidate. Solubility and initial electrochemical performance were promising; however, polymerisation was observed during electrochemical cycling leading to rapid capacity fade prescribed to a loss of accessible active material and the limitation of ion transport processes within the cell. A mixed electrolyte system of H3PO4 and HCl was found to inhibit polymerisation producing oligomers that consumed less active material reducing rates of degradation in the redox flow battery. Under these conditions Coulombic efficiency improved by over 4 %, the maximum number of cycles more than quadrupled and an additional theoretical capacity of 20 % was accessed. This paper is, to our knowledge, the first example of triarylamines as catholytes in all-aqueous redox flow batteries and emphasises the impact supporting electrolytes can have on electrochemical performance."}],"acknowledgement":"The authors (N.L.F and R.B.J) would like to acknowledge the funding contributions of Shell and the EPRSC via I–Case studentships (grants no. EP/V519662/1 and EP/R511870/1 respectively). T.I would like to thank the ERC advanced Investigator Grant for CPG (EC H2020 835073). Thank you to Zhen Wang from the University of Cambridge for measuring GPC, the Yusuf Hamied Department of Chemistry's mass spectrometry service for MS measurements and analysis and Dr Andrew Bond from the University of Cambridge for XRD measurement and analysis.","_id":"13041","author":[{"full_name":"Farag, Nadia L.","last_name":"Farag","first_name":"Nadia L."},{"orcid":"0000-0002-0404-4356","id":"4cc538d5-803f-11ed-ab7e-8139573aad8f","full_name":"Jethwa, Rajesh B","first_name":"Rajesh B","last_name":"Jethwa"},{"full_name":"Beardmore, Alice E.","last_name":"Beardmore","first_name":"Alice E."},{"full_name":"Insinna, Teresa","last_name":"Insinna","first_name":"Teresa"},{"last_name":"O'Keefe","first_name":"Christopher A.","full_name":"O'Keefe, Christopher A."},{"full_name":"Klusener, Peter A.A.","last_name":"Klusener","first_name":"Peter A.A."},{"full_name":"Grey, Clare P.","first_name":"Clare P.","last_name":"Grey"},{"last_name":"Wright","first_name":"Dominic S.","full_name":"Wright, Dominic S."}],"year":"2023","quality_controlled":"1","status":"public","citation":{"ista":"Farag NL, Jethwa RB, Beardmore AE, Insinna T, O’Keefe CA, Klusener PAA, Grey CP, Wright DS. 2023. Triarylamines as catholytes in aqueous organic redox flow batteries. ChemSusChem. 16(13), e202300128.","apa":"Farag, N. L., Jethwa, R. B., Beardmore, A. E., Insinna, T., O’Keefe, C. A., Klusener, P. A. A., … Wright, D. S. (2023). Triarylamines as catholytes in aqueous organic redox flow batteries. <i>ChemSusChem</i>. Wiley. <a href=\"https://doi.org/10.1002/cssc.202300128\">https://doi.org/10.1002/cssc.202300128</a>","ama":"Farag NL, Jethwa RB, Beardmore AE, et al. Triarylamines as catholytes in aqueous organic redox flow batteries. <i>ChemSusChem</i>. 2023;16(13). doi:<a href=\"https://doi.org/10.1002/cssc.202300128\">10.1002/cssc.202300128</a>","ieee":"N. L. Farag <i>et al.</i>, “Triarylamines as catholytes in aqueous organic redox flow batteries,” <i>ChemSusChem</i>, vol. 16, no. 13. Wiley, 2023.","mla":"Farag, Nadia L., et al. “Triarylamines as Catholytes in Aqueous Organic Redox Flow Batteries.” <i>ChemSusChem</i>, vol. 16, no. 13, e202300128, Wiley, 2023, doi:<a href=\"https://doi.org/10.1002/cssc.202300128\">10.1002/cssc.202300128</a>.","short":"N.L. Farag, R.B. Jethwa, A.E. Beardmore, T. Insinna, C.A. O’Keefe, P.A.A. Klusener, C.P. Grey, D.S. Wright, ChemSusChem 16 (2023).","chicago":"Farag, Nadia L., Rajesh B Jethwa, Alice E. Beardmore, Teresa Insinna, Christopher A. O’Keefe, Peter A.A. Klusener, Clare P. Grey, and Dominic S. Wright. “Triarylamines as Catholytes in Aqueous Organic Redox Flow Batteries.” <i>ChemSusChem</i>. Wiley, 2023. <a href=\"https://doi.org/10.1002/cssc.202300128\">https://doi.org/10.1002/cssc.202300128</a>."},"intvolume":"        16","external_id":{"pmid":["36970847"],"isi":["000985051300001"]},"title":"Triarylamines as catholytes in aqueous organic redox flow batteries","doi":"10.1002/cssc.202300128","date_published":"2023-07-06T00:00:00Z","date_created":"2023-05-21T22:01:05Z","oa_version":"Published Version","date_updated":"2023-11-14T11:28:23Z","pmid":1,"ddc":["540"],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"language":[{"iso":"eng"}],"publisher":"Wiley"}]