[{"corr_author":"1","day":"30","oa":1,"ec_funded":1,"language":[{"iso":"eng"}],"date_updated":"2025-06-25T09:03:21Z","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","doi":"10.1146/annurev-genet-071819-103748","pmid":1,"main_file_link":[{"url":"https://doi.org/10.1146/annurev-genet-071819-103748","open_access":"1"}],"OA_type":"free access","month":"08","status":"public","date_published":"2021-08-30T00:00:00Z","abstract":[{"text":"Multicellular organisms develop complex shapes from much simpler, single-celled zygotes through a process commonly called morphogenesis. Morphogenesis involves an interplay between several factors, ranging from the gene regulatory networks determining cell fate and differentiation to the mechanical processes underlying cell and tissue shape changes. Thus, the study of morphogenesis has historically been based on multidisciplinary approaches at the interface of biology with physics and mathematics. Recent technological advances have further improved our ability to study morphogenesis by bridging the gap between the genetic and biophysical factors through the development of new tools for visualizing, analyzing, and perturbing these factors and their biochemical intermediaries. Here, we review how a combination of genetic, microscopic, biophysical, and biochemical approaches has aided our attempts to understand morphogenesis and discuss potential approaches that may be beneficial to such an inquiry in the future.","lang":"eng"}],"publication_status":"published","isi":1,"type":"journal_article","publisher":"Annual Reviews","intvolume":"        55","_id":"10406","author":[{"first_name":"Nikhil","orcid":"0000-0002-6425-5788","id":"C4D70E82-1081-11EA-B3ED-9A4C3DDC885E","last_name":"Mishra","full_name":"Mishra, Nikhil"},{"orcid":"0000-0002-0912-4566","last_name":"Heisenberg","id":"39427864-F248-11E8-B48F-1D18A9856A87","first_name":"Carl-Philipp J","full_name":"Heisenberg, Carl-Philipp J"}],"keyword":["morphogenesis","forward genetics","high-resolution microscopy","biophysics","biochemistry","patterning"],"citation":{"chicago":"Mishra, Nikhil, and Carl-Philipp J Heisenberg. “Dissecting Organismal Morphogenesis by Bridging Genetics and Biophysics.” <i>Annual Review of Genetics</i>. Annual Reviews, 2021. <a href=\"https://doi.org/10.1146/annurev-genet-071819-103748\">https://doi.org/10.1146/annurev-genet-071819-103748</a>.","apa":"Mishra, N., &#38; Heisenberg, C.-P. J. (2021). Dissecting organismal morphogenesis by bridging genetics and biophysics. <i>Annual Review of Genetics</i>. Annual Reviews. <a href=\"https://doi.org/10.1146/annurev-genet-071819-103748\">https://doi.org/10.1146/annurev-genet-071819-103748</a>","short":"N. Mishra, C.-P.J. Heisenberg, Annual Review of Genetics 55 (2021) 209–233.","ama":"Mishra N, Heisenberg C-PJ. Dissecting organismal morphogenesis by bridging genetics and biophysics. <i>Annual Review of Genetics</i>. 2021;55:209-233. doi:<a href=\"https://doi.org/10.1146/annurev-genet-071819-103748\">10.1146/annurev-genet-071819-103748</a>","mla":"Mishra, Nikhil, and Carl-Philipp J. Heisenberg. “Dissecting Organismal Morphogenesis by Bridging Genetics and Biophysics.” <i>Annual Review of Genetics</i>, vol. 55, Annual Reviews, 2021, pp. 209–33, doi:<a href=\"https://doi.org/10.1146/annurev-genet-071819-103748\">10.1146/annurev-genet-071819-103748</a>.","ieee":"N. Mishra and C.-P. J. Heisenberg, “Dissecting organismal morphogenesis by bridging genetics and biophysics,” <i>Annual Review of Genetics</i>, vol. 55. Annual Reviews, pp. 209–233, 2021.","ista":"Mishra N, Heisenberg C-PJ. 2021. Dissecting organismal morphogenesis by bridging genetics and biophysics. Annual Review of Genetics. 55, 209–233."},"scopus_import":"1","quality_controlled":"1","department":[{"_id":"CaHe"}],"publication_identifier":{"issn":["0066-4197"],"eissn":["1545-2948"]},"article_processing_charge":"No","date_created":"2021-12-05T23:01:41Z","acknowledgement":"The authors would like to thank Feyza Nur Arslan, Suyash Naik, Diana Pinheiro, Alexandra Schauer, and Shayan Shamipour for their comments on the draft. N.M. is supported by an ISTplus postdoctoral fellowship (H2020 Marie-Sklodowska-Curie COFUND Action).","publication":"Annual Review of Genetics","project":[{"call_identifier":"H2020","grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships"}],"year":"2021","volume":55,"title":"Dissecting organismal morphogenesis by bridging genetics and biophysics","article_type":"original","external_id":{"isi":["000747220900010"],"pmid":["34460295"]},"OA_place":"publisher","page":"209-233"},{"day":"04","language":[{"iso":"eng"}],"ec_funded":1,"oa":1,"date_updated":"2025-04-14T07:22:05Z","alternative_title":["LNCS"],"oa_version":"Preprint","doi":"10.1007/978-3-030-90453-1_14","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","main_file_link":[{"url":"https://eprint.iacr.org/2021/1224","open_access":"1"}],"month":"11","status":"public","date_published":"2021-11-04T00:00:00Z","publication_status":"published","abstract":[{"text":"Digital hardware Trojans are integrated circuits whose implementation differ from the specification in an arbitrary and malicious way. For example, the circuit can differ from its specified input/output behavior after some fixed number of queries (known as “time bombs”) or on some particular input (known as “cheat codes”). To detect such Trojans, countermeasures using multiparty computation (MPC) or verifiable computation (VC) have been proposed. On a high level, to realize a circuit with specification   F  one has more sophisticated circuits   F⋄  manufactured (where   F⋄  specifies a MPC or VC of   F ), and then embeds these   F⋄ ’s into a master circuit which must be trusted but is relatively simple compared to   F . Those solutions impose a significant overhead as   F⋄  is much more complex than   F , also the master circuits are not exactly trivial. In this work, we show that in restricted settings, where   F  has no evolving state and is queried on independent inputs, we can achieve a relaxed security notion using very simple constructions. In particular, we do not change the specification of the circuit at all (i.e.,   F=F⋄ ). Moreover the master circuit basically just queries a subset of its manufactured circuits and checks if they’re all the same. The security we achieve guarantees that, if the manufactured circuits are initially tested on up to T inputs, the master circuit will catch Trojans that try to deviate on significantly more than a 1/T fraction of the inputs. This bound is optimal for the type of construction considered, and we provably achieve it using a construction where 12 instantiations of   F  need to be embedded into the master. We also discuss an extremely simple construction with just 2 instantiations for which we conjecture that it already achieves the optimal bound.","lang":"eng"}],"type":"conference","isi":1,"publisher":"Springer Nature","intvolume":"     13043","author":[{"last_name":"Chakraborty","id":"B9CD0494-D033-11E9-B219-A439E6697425","first_name":"Suvradip","full_name":"Chakraborty, Suvradip"},{"full_name":"Dziembowski, Stefan","last_name":"Dziembowski","first_name":"Stefan"},{"full_name":"Gałązka, Małgorzata","first_name":"Małgorzata","last_name":"Gałązka"},{"first_name":"Tomasz","last_name":"Lizurej","full_name":"Lizurej, Tomasz"},{"first_name":"Krzysztof Z","id":"3E04A7AA-F248-11E8-B48F-1D18A9856A87","last_name":"Pietrzak","orcid":"0000-0002-9139-1654","full_name":"Pietrzak, Krzysztof Z"},{"orcid":"0009-0001-3676-4809","id":"2D82B818-F248-11E8-B48F-1D18A9856A87","last_name":"Yeo","first_name":"Michelle X","full_name":"Yeo, Michelle X"}],"_id":"10407","citation":{"apa":"Chakraborty, S., Dziembowski, S., Gałązka, M., Lizurej, T., Pietrzak, K. Z., &#38; Yeo, M. X. (2021). Trojan-resilience without cryptography (Vol. 13043, pp. 397–428). Presented at the TCC: Theory of Cryptography Conference, Raleigh, NC, United States: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-030-90453-1_14\">https://doi.org/10.1007/978-3-030-90453-1_14</a>","short":"S. Chakraborty, S. Dziembowski, M. Gałązka, T. Lizurej, K.Z. Pietrzak, M.X. Yeo, in:, Springer Nature, 2021, pp. 397–428.","chicago":"Chakraborty, Suvradip, Stefan Dziembowski, Małgorzata Gałązka, Tomasz Lizurej, Krzysztof Z Pietrzak, and Michelle X Yeo. “Trojan-Resilience without Cryptography,” 13043:397–428. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/978-3-030-90453-1_14\">https://doi.org/10.1007/978-3-030-90453-1_14</a>.","ista":"Chakraborty S, Dziembowski S, Gałązka M, Lizurej T, Pietrzak KZ, Yeo MX. 2021. Trojan-resilience without cryptography. TCC: Theory of Cryptography Conference, LNCS, vol. 13043, 397–428.","ieee":"S. Chakraborty, S. Dziembowski, M. Gałązka, T. Lizurej, K. Z. Pietrzak, and M. X. Yeo, “Trojan-resilience without cryptography,” presented at the TCC: Theory of Cryptography Conference, Raleigh, NC, United States, 2021, vol. 13043, pp. 397–428.","mla":"Chakraborty, Suvradip, et al. <i>Trojan-Resilience without Cryptography</i>. Vol. 13043, Springer Nature, 2021, pp. 397–428, doi:<a href=\"https://doi.org/10.1007/978-3-030-90453-1_14\">10.1007/978-3-030-90453-1_14</a>.","ama":"Chakraborty S, Dziembowski S, Gałązka M, Lizurej T, Pietrzak KZ, Yeo MX. Trojan-resilience without cryptography. In: Vol 13043. Springer Nature; 2021:397-428. doi:<a href=\"https://doi.org/10.1007/978-3-030-90453-1_14\">10.1007/978-3-030-90453-1_14</a>"},"quality_controlled":"1","scopus_import":"1","department":[{"_id":"KrPi"}],"conference":{"name":"TCC: Theory of Cryptography Conference","location":"Raleigh, NC, United States","end_date":"2021-11-11","start_date":"2021-11-08"},"publication_identifier":{"issn":["0302-9743"],"eissn":["1611-3349"],"isbn":["9-783-0309-0452-4"]},"date_created":"2021-12-05T23:01:42Z","article_processing_charge":"No","year":"2021","project":[{"call_identifier":"H2020","grant_number":"682815","name":"Teaching Old Crypto New Tricks","_id":"258AA5B2-B435-11E9-9278-68D0E5697425"}],"title":"Trojan-resilience without cryptography","external_id":{"isi":["000728364000014"]},"volume":13043,"page":"397-428"},{"ec_funded":1,"oa":1,"language":[{"iso":"eng"}],"date_updated":"2025-04-15T08:32:06Z","alternative_title":["LNCS"],"oa_version":"Preprint","day":"04","date_published":"2021-11-04T00:00:00Z","status":"public","abstract":[{"lang":"eng","text":"We show that Yao’s garbling scheme is adaptively indistinguishable for the class of Boolean circuits of size   S  and treewidth   w  with only a   SO(w)  loss in security. For instance, circuits with constant treewidth are as a result adaptively indistinguishable with only a polynomial loss. This (partially) complements a negative result of Applebaum et al. (Crypto 2013), which showed (assuming one-way functions) that Yao’s garbling scheme cannot be adaptively simulatable. As main technical contributions, we introduce a new pebble game that abstracts out our security reduction and then present a pebbling strategy for this game where the number of pebbles used is roughly   O(δwlog(S)) ,   δ  being the fan-out of the circuit. The design of the strategy relies on separators, a graph-theoretic notion with connections to circuit complexity.  with only a   SO(w)  loss in security. For instance, circuits with constant treewidth are as a result adaptively indistinguishable with only a polynomial loss. This (partially) complements a negative result of Applebaum et al. (Crypto 2013), which showed (assuming one-way functions) that Yao’s garbling scheme cannot be adaptively simulatable. As main technical contributions, we introduce a new pebble game that abstracts out our security reduction and then present a pebbling strategy for this game where the number of pebbles used is roughly   O(δwlog(S)) ,   δ  being the fan-out of the circuit. The design of the strategy relies on separators, a graph-theoretic notion with connections to circuit complexity."}],"publication_status":"published","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","doi":"10.1007/978-3-030-90453-1_17","month":"11","main_file_link":[{"url":"https://eprint.iacr.org/2021/926","open_access":"1"}],"_id":"10409","author":[{"id":"4BD3F30E-F248-11E8-B48F-1D18A9856A87","last_name":"Kamath Hosdurg","first_name":"Chethan","full_name":"Kamath Hosdurg, Chethan"},{"id":"3E83A2F8-F248-11E8-B48F-1D18A9856A87","last_name":"Klein","first_name":"Karen","full_name":"Klein, Karen"},{"full_name":"Pietrzak, Krzysztof Z","first_name":"Krzysztof Z","id":"3E04A7AA-F248-11E8-B48F-1D18A9856A87","last_name":"Pietrzak","orcid":"0000-0002-9139-1654"}],"scopus_import":"1","quality_controlled":"1","citation":{"short":"C. Kamath Hosdurg, K. Klein, K.Z. Pietrzak, in:, 19th International Conference, Springer Nature, 2021, pp. 486–517.","apa":"Kamath Hosdurg, C., Klein, K., &#38; Pietrzak, K. Z. (2021). On treewidth, separators and Yao’s garbling. In <i>19th International Conference</i> (Vol. 13043, pp. 486–517). Raleigh, NC, United States: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-030-90453-1_17\">https://doi.org/10.1007/978-3-030-90453-1_17</a>","chicago":"Kamath Hosdurg, Chethan, Karen Klein, and Krzysztof Z Pietrzak. “On Treewidth, Separators and Yao’s Garbling.” In <i>19th International Conference</i>, 13043:486–517. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/978-3-030-90453-1_17\">https://doi.org/10.1007/978-3-030-90453-1_17</a>.","mla":"Kamath Hosdurg, Chethan, et al. “On Treewidth, Separators and Yao’s Garbling.” <i>19th International Conference</i>, vol. 13043, Springer Nature, 2021, pp. 486–517, doi:<a href=\"https://doi.org/10.1007/978-3-030-90453-1_17\">10.1007/978-3-030-90453-1_17</a>.","ieee":"C. Kamath Hosdurg, K. Klein, and K. Z. Pietrzak, “On treewidth, separators and Yao’s garbling,” in <i>19th International Conference</i>, Raleigh, NC, United States, 2021, vol. 13043, pp. 486–517.","ista":"Kamath Hosdurg C, Klein K, Pietrzak KZ. 2021. On treewidth, separators and Yao’s garbling. 19th International Conference. TCC: Theory of Cryptography, LNCS, vol. 13043, 486–517.","ama":"Kamath Hosdurg C, Klein K, Pietrzak KZ. On treewidth, separators and Yao’s garbling. In: <i>19th International Conference</i>. Vol 13043. Springer Nature; 2021:486-517. doi:<a href=\"https://doi.org/10.1007/978-3-030-90453-1_17\">10.1007/978-3-030-90453-1_17</a>"},"isi":1,"type":"conference","publisher":"Springer Nature","volume":"13043 ","title":"On treewidth, separators and Yao’s garbling","external_id":{"isi":["000728364000017"]},"project":[{"name":"Teaching Old Crypto New Tricks","_id":"258AA5B2-B435-11E9-9278-68D0E5697425","grant_number":"682815","call_identifier":"H2020"}],"publication":"19th International Conference","year":"2021","page":"486-517","related_material":{"record":[{"id":"10044","status":"public","relation":"earlier_version"}]},"conference":{"name":"TCC: Theory of Cryptography","start_date":"2021-11-08","end_date":"2021-11-11","location":"Raleigh, NC, United States"},"department":[{"_id":"KrPi"}],"article_processing_charge":"No","date_created":"2021-12-05T23:01:43Z","acknowledgement":"We are grateful to Daniel Wichs for helpful discussions on the landscape of adaptive security of Yao’s garbling. We would also like to thank Crypto 2021 and TCC 2021 reviewers for their detailed review and suggestions, which helped improve presentation considerably.","publication_identifier":{"isbn":["9-783-0309-0452-4"],"eissn":["1611-3349"],"issn":["0302-9743"]}},{"_id":"10410","author":[{"first_name":"Chethan","last_name":"Kamath Hosdurg","id":"4BD3F30E-F248-11E8-B48F-1D18A9856A87","full_name":"Kamath Hosdurg, Chethan"},{"first_name":"Karen","last_name":"Klein","id":"3E83A2F8-F248-11E8-B48F-1D18A9856A87","full_name":"Klein, Karen"},{"last_name":"Pietrzak","id":"3E04A7AA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-9139-1654","first_name":"Krzysztof Z","full_name":"Pietrzak, Krzysztof Z"},{"full_name":"Walter, Michael","first_name":"Michael","id":"488F98B0-F248-11E8-B48F-1D18A9856A87","last_name":"Walter","orcid":"0000-0003-3186-2482"}],"citation":{"ama":"Kamath Hosdurg C, Klein K, Pietrzak KZ, Walter M. The cost of adaptivity in security games on graphs. In: <i>19th International Conference</i>. Vol 13043. Springer Nature; 2021:550-581. doi:<a href=\"https://doi.org/10.1007/978-3-030-90453-1_19\">10.1007/978-3-030-90453-1_19</a>","mla":"Kamath Hosdurg, Chethan, et al. “The Cost of Adaptivity in Security Games on Graphs.” <i>19th International Conference</i>, vol. 13043, Springer Nature, 2021, pp. 550–81, doi:<a href=\"https://doi.org/10.1007/978-3-030-90453-1_19\">10.1007/978-3-030-90453-1_19</a>.","ieee":"C. Kamath Hosdurg, K. Klein, K. Z. Pietrzak, and M. Walter, “The cost of adaptivity in security games on graphs,” in <i>19th International Conference</i>, Raleigh, NC, United States, 2021, vol. 13043, pp. 550–581.","ista":"Kamath Hosdurg C, Klein K, Pietrzak KZ, Walter M. 2021. The cost of adaptivity in security games on graphs. 19th International Conference. TCC: Theory of Cryptography, LNCS, vol. 13043, 550–581.","chicago":"Kamath Hosdurg, Chethan, Karen Klein, Krzysztof Z Pietrzak, and Michael Walter. “The Cost of Adaptivity in Security Games on Graphs.” In <i>19th International Conference</i>, 13043:550–81. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/978-3-030-90453-1_19\">https://doi.org/10.1007/978-3-030-90453-1_19</a>.","short":"C. Kamath Hosdurg, K. Klein, K.Z. Pietrzak, M. Walter, in:, 19th International Conference, Springer Nature, 2021, pp. 550–581.","apa":"Kamath Hosdurg, C., Klein, K., Pietrzak, K. Z., &#38; Walter, M. (2021). The cost of adaptivity in security games on graphs. In <i>19th International Conference</i> (Vol. 13043, pp. 550–581). Raleigh, NC, United States: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-030-90453-1_19\">https://doi.org/10.1007/978-3-030-90453-1_19</a>"},"scopus_import":"1","quality_controlled":"1","isi":1,"type":"conference","publisher":"Springer Nature","intvolume":"     13043","publication":"19th International Conference","project":[{"grant_number":"682815","call_identifier":"H2020","_id":"258AA5B2-B435-11E9-9278-68D0E5697425","name":"Teaching Old Crypto New Tricks"}],"year":"2021","volume":13043,"title":"The cost of adaptivity in security games on graphs","external_id":{"isi":["000728364000019"]},"related_material":{"record":[{"relation":"earlier_version","status":"public","id":"10048"}]},"page":"550-581","department":[{"_id":"KrPi"}],"conference":{"name":"TCC: Theory of Cryptography","location":"Raleigh, NC, United States","start_date":"2021-11-08","end_date":"2021-11-11"},"publication_identifier":{"isbn":["9-783-0309-0452-4"],"eissn":["1611-3349"],"issn":["0302-9743"]},"article_processing_charge":"No","date_created":"2021-12-05T23:01:43Z","acknowledgement":"C. Kamath—Supported by Azrieli International Postdoctoral Fellowship. Most of the work was done while the author was at Northeastern University and Charles University, funded by the IARPA grant IARPA/2019-19-020700009 and project PRIMUS/17/SCI/9, respectively. K. Klein—Supported in part by ERC CoG grant 724307. Most of the work was done while the author was at IST Austria funded by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (682815 - TOCNeT). K. Pietrzak—Funded by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (682815 - TOCNeT).","language":[{"iso":"eng"}],"ec_funded":1,"oa":1,"date_updated":"2025-04-14T07:22:05Z","oa_version":"Preprint","alternative_title":["LNCS"],"day":"04","status":"public","date_published":"2021-11-04T00:00:00Z","publication_status":"published","abstract":[{"text":"The security of cryptographic primitives and protocols against adversaries that are allowed to make adaptive choices (e.g., which parties to corrupt or which queries to make) is notoriously difficult to establish. A broad theoretical framework was introduced by Jafargholi et al. [Crypto’17] for this purpose. In this paper we initiate the study of lower bounds on loss in adaptive security for certain cryptographic protocols considered in the framework. We prove lower bounds that almost match the upper bounds (proven using the framework) for proxy re-encryption, prefix-constrained PRFs and generalized selective decryption, a security game that captures the security of certain group messaging and broadcast encryption schemes. Those primitives have in common that their security game involves an underlying graph that can be adaptively built by the adversary. Some of our lower bounds only apply to a restricted class of black-box reductions which we term “oblivious” (the existing upper bounds are of this restricted type), some apply to the broader but still restricted class of non-rewinding reductions, while our lower bound for proxy re-encryption applies to all black-box reductions. The fact that some of our lower bounds seem to crucially rely on obliviousness or at least a non-rewinding reduction hints to the exciting possibility that the existing upper bounds can be improved by using more sophisticated reductions. Our main conceptual contribution is a two-player multi-stage game called the Builder-Pebbler Game. We can translate bounds on the winning probabilities for various instantiations of this game into cryptographic lower bounds for the above-mentioned primitives using oracle separation techniques.","lang":"eng"}],"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","doi":"10.1007/978-3-030-90453-1_19","main_file_link":[{"open_access":"1","url":"https://ia.cr/2021/059"}],"month":"11"},{"day":"01","intvolume":"       343","publisher":"Springer Nature","corr_author":"1","type":"book","oa_version":"None","scopus_import":"1","quality_controlled":"1","alternative_title":["Progress in Mathematics"],"date_updated":"2024-10-09T21:01:16Z","citation":{"short":"T.D. Browning, Cubic Forms and the Circle Method, Springer Nature, Cham, 2021.","apa":"Browning, T. D. (2021). <i>Cubic Forms and the Circle Method</i> (Vol. 343). Cham: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-030-86872-7\">https://doi.org/10.1007/978-3-030-86872-7</a>","chicago":"Browning, Timothy D. <i>Cubic Forms and the Circle Method</i>. Vol. 343. Cham: Springer Nature, 2021. <a href=\"https://doi.org/10.1007/978-3-030-86872-7\">https://doi.org/10.1007/978-3-030-86872-7</a>.","ista":"Browning TD. 2021. Cubic Forms and the Circle Method, Cham: Springer Nature, XIV, 166p.","mla":"Browning, Timothy D. <i>Cubic Forms and the Circle Method</i>. Vol. 343, Springer Nature, 2021, doi:<a href=\"https://doi.org/10.1007/978-3-030-86872-7\">10.1007/978-3-030-86872-7</a>.","ieee":"T. D. Browning, <i>Cubic Forms and the Circle Method</i>, vol. 343. Cham: Springer Nature, 2021.","ama":"Browning TD. <i>Cubic Forms and the Circle Method</i>. Vol 343. Cham: Springer Nature; 2021. doi:<a href=\"https://doi.org/10.1007/978-3-030-86872-7\">10.1007/978-3-030-86872-7</a>"},"_id":"10415","language":[{"iso":"eng"}],"author":[{"full_name":"Browning, Timothy D","first_name":"Timothy D","id":"35827D50-F248-11E8-B48F-1D18A9856A87","last_name":"Browning","orcid":"0000-0002-8314-0177"}],"article_processing_charge":"No","month":"12","date_created":"2021-12-05T23:01:46Z","publication_identifier":{"issn":["0743-1643"],"eissn":["2296-505X"],"eisbn":["978-3-030-86872-7"],"isbn":["978-3-030-86871-0"]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"TiBr"}],"doi":"10.1007/978-3-030-86872-7","publication_status":"published","page":"XIV, 166","abstract":[{"text":"The Hardy–Littlewood circle method was invented over a century ago to study integer solutions to special Diophantine equations, but it has since proven to be one of the most successful all-purpose tools available to number theorists. Not only is it capable of handling remarkably general systems of polynomial equations defined over arbitrary global fields, but it can also shed light on the space of rational curves that lie on algebraic varieties.  This book, in which the arithmetic of cubic polynomials takes centre stage, is aimed at bringing beginning graduate students into contact with some of the many facets of the circle method, both classical and modern. This monograph is the winner of the 2021 Ferran Sunyer i Balaguer Prize, a prestigious award for books of expository nature presenting the latest developments in an active area of research in mathematics.","lang":"eng"}],"date_published":"2021-12-01T00:00:00Z","volume":343,"title":"Cubic Forms and the Circle Method","year":"2021","place":"Cham","status":"public"},{"volume":127,"external_id":{"isi":["000923819400004"],"arxiv":["2109.00011"]},"title":"Unconventional superconductivity in systems with annular Fermi surfaces: Application to rhombohedral trilayer graphene","article_type":"original","project":[{"_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships","grant_number":"754411","call_identifier":"H2020"}],"publication":"Physical Review Letters","year":"2021","related_material":{"link":[{"url":"https://ist.ac.at/en/news/resolving-the-puzzles-of-graphene-superconductivity/","description":"News on IST Webpage","relation":"press_release"}]},"department":[{"_id":"MaSe"}],"article_processing_charge":"No","date_created":"2021-12-10T07:51:33Z","acknowledgement":"We thank Yang-Zhi Chou, Andrey Chubukov, Johannes Hofmann, Steve Kivelson, Sri Raghu, and Sankar das Sarma, Jay Sau, Fengcheng Wu, and Andrea Young for many stimulating discussions and for their comments on the manuscript. E.B. thanks S. Chatterjee, T. Wang, and M. Zaletel for a collaboration on a related topic. A.G. acknowledges support by the European Unions Horizon 2020 research and innovation program under the Marie Sklodowska-Curie Grant Agreement No. 754411. E.B. and T.H. were supported by the European Research Council (ERC) under grant HQMAT (Grant Agreement No. 817799), by the Israel-USA Binational Science Foundation (BSF), and by a Research grant from Irving and Cherna Moskowitz.","publication_identifier":{"issn":["0031-9007"],"eissn":["1079-7114"]},"_id":"10527","author":[{"first_name":"Areg","last_name":"Ghazaryan","id":"4AF46FD6-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-9666-3543","full_name":"Ghazaryan, Areg"},{"full_name":"Holder, Tobias","last_name":"Holder","first_name":"Tobias"},{"full_name":"Serbyn, Maksym","first_name":"Maksym","last_name":"Serbyn","id":"47809E7E-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2399-5827"},{"last_name":"Berg","first_name":"Erez","full_name":"Berg, Erez"}],"quality_controlled":"1","scopus_import":"1","article_number":"247001","keyword":["general physics and astronomy"],"citation":{"ama":"Ghazaryan A, Holder T, Serbyn M, Berg E. Unconventional superconductivity in systems with annular Fermi surfaces: Application to rhombohedral trilayer graphene. <i>Physical Review Letters</i>. 2021;127(24). doi:<a href=\"https://doi.org/10.1103/physrevlett.127.247001\">10.1103/physrevlett.127.247001</a>","ieee":"A. Ghazaryan, T. Holder, M. Serbyn, and E. Berg, “Unconventional superconductivity in systems with annular Fermi surfaces: Application to rhombohedral trilayer graphene,” <i>Physical Review Letters</i>, vol. 127, no. 24. American Physical Society, 2021.","ista":"Ghazaryan A, Holder T, Serbyn M, Berg E. 2021. Unconventional superconductivity in systems with annular Fermi surfaces: Application to rhombohedral trilayer graphene. Physical Review Letters. 127(24), 247001.","mla":"Ghazaryan, Areg, et al. “Unconventional Superconductivity in Systems with Annular Fermi Surfaces: Application to Rhombohedral Trilayer Graphene.” <i>Physical Review Letters</i>, vol. 127, no. 24, 247001, American Physical Society, 2021, doi:<a href=\"https://doi.org/10.1103/physrevlett.127.247001\">10.1103/physrevlett.127.247001</a>.","chicago":"Ghazaryan, Areg, Tobias Holder, Maksym Serbyn, and Erez Berg. “Unconventional Superconductivity in Systems with Annular Fermi Surfaces: Application to Rhombohedral Trilayer Graphene.” <i>Physical Review Letters</i>. American Physical Society, 2021. <a href=\"https://doi.org/10.1103/physrevlett.127.247001\">https://doi.org/10.1103/physrevlett.127.247001</a>.","apa":"Ghazaryan, A., Holder, T., Serbyn, M., &#38; Berg, E. (2021). Unconventional superconductivity in systems with annular Fermi surfaces: Application to rhombohedral trilayer graphene. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevlett.127.247001\">https://doi.org/10.1103/physrevlett.127.247001</a>","short":"A. Ghazaryan, T. Holder, M. Serbyn, E. Berg, Physical Review Letters 127 (2021)."},"isi":1,"type":"journal_article","intvolume":"       127","publisher":"American Physical Society","date_published":"2021-12-09T00:00:00Z","status":"public","publication_status":"published","abstract":[{"text":"We show that in a two-dimensional electron gas with an annular Fermi surface, long-range Coulomb interactions can lead to unconventional superconductivity by the Kohn-Luttinger mechanism. Superconductivity is strongly enhanced when the inner and outer Fermi surfaces are close to each other. The most prevalent state has chiral p-wave symmetry, but d-wave and extended s-wave pairing are also possible. We discuss these results in the context of rhombohedral trilayer graphene, where superconductivity was recently discovered in regimes where the normal state has an annular Fermi surface. Using realistic parameters, our mechanism can account for the order of magnitude of Tc, as well as its trends as a function of electron density and perpendicular displacement field. Moreover, it naturally explains some of the outstanding puzzles in this material, that include the weak temperature dependence of the resistivity above Tc, and the proximity of spin singlet superconductivity to the ferromagnetic phase.","lang":"eng"}],"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","doi":"10.1103/physrevlett.127.247001","month":"12","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/2109.00011"}],"oa":1,"language":[{"iso":"eng"}],"ec_funded":1,"date_updated":"2025-04-14T07:43:47Z","oa_version":"Preprint","issue":"24","arxiv":1,"day":"09"},{"file":[{"date_updated":"2022-05-16T10:42:22Z","access_level":"open_access","creator":"dernst","relation":"main_file","content_type":"application/pdf","file_id":"11384","date_created":"2022-05-16T10:42:22Z","checksum":"22ed4c55fb550f6da02ae55c359be651","file_size":2715200,"file_name":"2021_eLife_Choi.pdf","success":1}],"corr_author":"1","license":"https://creativecommons.org/licenses/by/4.0/","day":"01","oa":1,"ec_funded":1,"language":[{"iso":"eng"}],"date_updated":"2025-04-14T07:57:42Z","oa_version":"Published Version","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","pmid":1,"doi":"10.7554/elife.72676","month":"12","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"status":"public","date_published":"2021-12-01T00:00:00Z","ddc":["570"],"abstract":[{"lang":"eng","text":"Flowering plants utilize small RNA molecules to guide DNA methyltransferases to genomic sequences. This RNA-directed DNA methylation (RdDM) pathway preferentially targets euchromatic transposable elements. However, RdDM is thought to be recruited by methylation of histone H3 at lysine 9 (H3K9me), a hallmark of heterochromatin. How RdDM is targeted to euchromatin despite an affinity for H3K9me is unclear. Here we show that loss of histone H1 enhances heterochromatic RdDM, preferentially at nucleosome linker DNA. Surprisingly, this does not require SHH1, the RdDM component that binds H3K9me. Furthermore, H3K9me is dispensable for RdDM, as is CG DNA methylation. Instead, we find that non-CG methylation is specifically associated with small RNA biogenesis, and without H1 small RNA production quantitatively expands to non-CG methylated loci. Our results demonstrate that H1 enforces the separation of euchromatic and heterochromatic DNA methylation pathways by excluding the small RNA-generating branch of RdDM from non-CG methylated heterochromatin."}],"publication_status":"published","isi":1,"type":"journal_article","publisher":"eLife Sciences Publications","intvolume":"        10","_id":"10533","file_date_updated":"2022-05-16T10:42:22Z","author":[{"first_name":"Jaemyung","last_name":"Choi","full_name":"Choi, Jaemyung"},{"last_name":"Lyons","first_name":"David B","full_name":"Lyons, David B"},{"first_name":"Daniel","last_name":"Zilberman","id":"6973db13-dd5f-11ea-814e-b3e5455e9ed1","orcid":"0000-0002-0123-8649","full_name":"Zilberman, Daniel"}],"keyword":["genetics and molecular biology"],"citation":{"mla":"Choi, Jaemyung, et al. “Histone H1 Prevents Non-CG Methylation-Mediated Small RNA Biogenesis in Arabidopsis Heterochromatin.” <i>ELife</i>, vol. 10, e72676, eLife Sciences Publications, 2021, doi:<a href=\"https://doi.org/10.7554/elife.72676\">10.7554/elife.72676</a>.","ista":"Choi J, Lyons DB, Zilberman D. 2021. Histone H1 prevents non-CG methylation-mediated small RNA biogenesis in Arabidopsis heterochromatin. eLife. 10, e72676.","ieee":"J. Choi, D. B. Lyons, and D. Zilberman, “Histone H1 prevents non-CG methylation-mediated small RNA biogenesis in Arabidopsis heterochromatin,” <i>eLife</i>, vol. 10. eLife Sciences Publications, 2021.","ama":"Choi J, Lyons DB, Zilberman D. Histone H1 prevents non-CG methylation-mediated small RNA biogenesis in Arabidopsis heterochromatin. <i>eLife</i>. 2021;10. doi:<a href=\"https://doi.org/10.7554/elife.72676\">10.7554/elife.72676</a>","apa":"Choi, J., Lyons, D. B., &#38; Zilberman, D. (2021). Histone H1 prevents non-CG methylation-mediated small RNA biogenesis in Arabidopsis heterochromatin. <i>ELife</i>. eLife Sciences Publications. <a href=\"https://doi.org/10.7554/elife.72676\">https://doi.org/10.7554/elife.72676</a>","short":"J. Choi, D.B. Lyons, D. Zilberman, ELife 10 (2021).","chicago":"Choi, Jaemyung, David B Lyons, and Daniel Zilberman. “Histone H1 Prevents Non-CG Methylation-Mediated Small RNA Biogenesis in Arabidopsis Heterochromatin.” <i>ELife</i>. eLife Sciences Publications, 2021. <a href=\"https://doi.org/10.7554/elife.72676\">https://doi.org/10.7554/elife.72676</a>."},"quality_controlled":"1","article_number":"e72676","scopus_import":"1","has_accepted_license":"1","department":[{"_id":"DaZi"}],"publication_identifier":{"issn":["2050-084X"]},"article_processing_charge":"No","acknowledgement":"We thank X Feng for helpful comments on the manuscript. This work was supported by a European Research Council grant MaintainMeth (725746) to DZ.","date_created":"2021-12-10T13:12:08Z","project":[{"grant_number":"725746","call_identifier":"H2020","_id":"62935a00-2b32-11ec-9570-eff30fa39068","name":"Quantitative analysis of DNA methylation maintenance with chromatin"}],"publication":"eLife","year":"2021","volume":10,"external_id":{"pmid":["34850679"],"isi":["000754832000001"]},"article_type":"original","title":"Histone H1 prevents non-CG methylation-mediated small RNA biogenesis in Arabidopsis heterochromatin"},{"publication_identifier":{"issn":["2050-7534"],"eissn":["2050-7526"]},"acknowledgement":"J. D. gratefully acknowledges the China Scholarship Council (CSC No. 201606340158) for supporting his PhD studies. S. S. thanks J. Antoja-Lleonart for insightful discussions on simulating the X-ray diffraction patterns. Part of the work was sponsored by NWO Exact and Natural Sciences for the use of supercomputer facilities (Contract no. 17197 7095). Regarding S. S., R. A., R. W. A. H., J. C. H., and M. A. L., this is a publication by the FOM Focus Group “Next Generation Organic Photovoltaics”, participating in the Dutch Institute for Fundamental Energy Research (DIFFER). The ESRF is acknowledged for providing the beamtime. J. D. and G. P. are grateful to the BM26B staff for their great support during the beamtime. M. A. L., D. M. B. are grateful for the financial support of the European Research Council via a Starting Grant (HySPOD, No. 306983).","date_created":"2021-12-12T23:01:27Z","article_processing_charge":"No","department":[{"_id":"MaIb"}],"page":"16217-16225","year":"2021","publication":"Journal of Materials Chemistry C","article_type":"original","title":"Fullerene derivatives with oligoethylene-glycol side chains: An investigation on the origin of their outstanding transport properties","external_id":{"isi":["000688135700001"]},"volume":9,"publisher":"Royal Society of Chemistry","intvolume":"         9","type":"journal_article","isi":1,"citation":{"apa":"Dong, J., Sami, S., Balazs, D., Alessandri, R., Jahani, F., Qiu, L., … Portale, G. (2021). Fullerene derivatives with oligoethylene-glycol side chains: An investigation on the origin of their outstanding transport properties. <i>Journal of Materials Chemistry C</i>. Royal Society of Chemistry. <a href=\"https://doi.org/10.1039/d1tc02753k\">https://doi.org/10.1039/d1tc02753k</a>","short":"J. Dong, S. Sami, D. Balazs, R. Alessandri, F. Jahani, L. Qiu, S.J. Marrink, R.W.A. Havenith, J.C. Hummelen, M.A. Loi, G. Portale, Journal of Materials Chemistry C 9 (2021) 16217–16225.","chicago":"Dong, Jingjin, Selim Sami, Daniel Balazs, Riccardo Alessandri, Fatimeh Jahani, Li Qiu, Siewert J. Marrink, et al. “Fullerene Derivatives with Oligoethylene-Glycol Side Chains: An Investigation on the Origin of Their Outstanding Transport Properties.” <i>Journal of Materials Chemistry C</i>. Royal Society of Chemistry, 2021. <a href=\"https://doi.org/10.1039/d1tc02753k\">https://doi.org/10.1039/d1tc02753k</a>.","ieee":"J. Dong <i>et al.</i>, “Fullerene derivatives with oligoethylene-glycol side chains: An investigation on the origin of their outstanding transport properties,” <i>Journal of Materials Chemistry C</i>, vol. 9, no. 45. Royal Society of Chemistry, pp. 16217–16225, 2021.","ista":"Dong J, Sami S, Balazs D, Alessandri R, Jahani F, Qiu L, Marrink SJ, Havenith RWA, Hummelen JC, Loi MA, Portale G. 2021. Fullerene derivatives with oligoethylene-glycol side chains: An investigation on the origin of their outstanding transport properties. Journal of Materials Chemistry C. 9(45), 16217–16225.","mla":"Dong, Jingjin, et al. “Fullerene Derivatives with Oligoethylene-Glycol Side Chains: An Investigation on the Origin of Their Outstanding Transport Properties.” <i>Journal of Materials Chemistry C</i>, vol. 9, no. 45, Royal Society of Chemistry, 2021, pp. 16217–25, doi:<a href=\"https://doi.org/10.1039/d1tc02753k\">10.1039/d1tc02753k</a>.","ama":"Dong J, Sami S, Balazs D, et al. Fullerene derivatives with oligoethylene-glycol side chains: An investigation on the origin of their outstanding transport properties. <i>Journal of Materials Chemistry C</i>. 2021;9(45):16217-16225. doi:<a href=\"https://doi.org/10.1039/d1tc02753k\">10.1039/d1tc02753k</a>"},"has_accepted_license":"1","quality_controlled":"1","scopus_import":"1","author":[{"last_name":"Dong","first_name":"Jingjin","full_name":"Dong, Jingjin"},{"last_name":"Sami","first_name":"Selim","full_name":"Sami, Selim"},{"first_name":"Daniel","orcid":"0000-0001-7597-043X","id":"302BADF6-85FC-11EA-9E3B-B9493DDC885E","last_name":"Balazs","full_name":"Balazs, Daniel"},{"full_name":"Alessandri, Riccardo","last_name":"Alessandri","first_name":"Riccardo"},{"first_name":"Fatimeh","last_name":"Jahani","full_name":"Jahani, Fatimeh"},{"full_name":"Qiu, Li","first_name":"Li","last_name":"Qiu"},{"full_name":"Marrink, Siewert J.","last_name":"Marrink","first_name":"Siewert J."},{"last_name":"Havenith","first_name":"Remco W.A.","full_name":"Havenith, Remco W.A."},{"last_name":"Hummelen","first_name":"Jan C.","full_name":"Hummelen, Jan C."},{"full_name":"Loi, Maria A.","last_name":"Loi","first_name":"Maria A."},{"full_name":"Portale, Giuseppe","last_name":"Portale","first_name":"Giuseppe"}],"file_date_updated":"2021-12-13T09:24:42Z","_id":"10534","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"month":"12","doi":"10.1039/d1tc02753k","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","abstract":[{"lang":"eng","text":"For many years, fullerene derivatives have been the main n-type material of organic electronics and optoelectronics. Recently, fullerene derivatives functionalized with ethylene glycol (EG) side chains have been showing important properties such as enhanced dielectric constants, facile doping and enhanced self-assembly capabilities. Here, we have prepared field-effect transistors using a series of these fullerene derivatives equipped with EG side chains of different lengths. Transport data show the beneficial effect of increasing the EG side chain. In order to understand the material properties, full structural determination of these fullerene derivatives has been achieved by coupling the X-ray data with molecular dynamics (MD) simulations. The increase in transport properties is paired with the formation of extended layered structures, efficient molecular packing and an increase in the crystallite alignment. The layer-like structure is composed of conducting layers, containing of closely packed C60 balls approaching the inter-distance of 1 nm, that are separated by well-defined EG layers, where the EG chains are rather splayed with the chain direction almost perpendicular to the layer normal. Such a layered structure appears highly ordered and highly aligned with the C60 planes oriented parallel to the substrate in the thin film configuration. The order inside the thin film increases with the EG chain length, allowing the systems to achieve mobilities as high as 0.053 cm2 V−1 s−1. Our work elucidates the structure of these interesting semiconducting organic molecules and shows that the synergistic use of X-ray structural analysis and MD simulations is a powerful tool to identify the structure of thin organic films for optoelectronic applications."}],"publication_status":"published","ddc":["540"],"status":"public","date_published":"2021-12-07T00:00:00Z","day":"07","file":[{"creator":"cchlebak","access_level":"open_access","date_updated":"2021-12-13T09:24:42Z","content_type":"application/pdf","relation":"main_file","checksum":"6b73c214ce54a6894a5854b4364413d7","date_created":"2021-12-13T09:24:42Z","file_id":"10538","success":1,"file_name":"2021_JMaterChemC_Dong.pdf","file_size":4979390}],"issue":"45","date_updated":"2023-08-17T06:18:44Z","oa_version":"Published Version","language":[{"iso":"eng"}],"oa":1},{"day":"01","corr_author":"1","file":[{"date_created":"2022-05-16T08:53:11Z","file_id":"11383","checksum":"dcd185d4f7e0acee25edf1d6537f447e","success":1,"file_size":2299486,"file_name":"2021_PLOsComBio_Bodova.pdf","date_updated":"2022-05-16T08:53:11Z","creator":"dernst","access_level":"open_access","content_type":"application/pdf","relation":"main_file"}],"date_updated":"2024-10-09T21:01:16Z","oa_version":"Published Version","issue":"12","arxiv":1,"oa":1,"language":[{"iso":"eng"}],"month":"12","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","pmid":1,"doi":"10.1371/journal.pcbi.1009661","ddc":["570"],"publication_status":"published","abstract":[{"lang":"eng","text":"Realistic models of biological processes typically involve interacting components on multiple scales, driven by changing environment and inherent stochasticity. Such models are often analytically and numerically intractable. We revisit a dynamic maximum entropy method that combines a static maximum entropy with a quasi-stationary approximation. This allows us to reduce stochastic non-equilibrium dynamics expressed by the Fokker-Planck equation to a simpler low-dimensional deterministic dynamics, without the need to track microscopic details. Although the method has been previously applied to a few (rather complicated) applications in population genetics, our main goal here is to explain and to better understand how the method works. We demonstrate the usefulness of the method for two widely studied stochastic problems, highlighting its accuracy in capturing important macroscopic quantities even in rapidly changing non-stationary conditions. For the Ornstein-Uhlenbeck process, the method recovers the exact dynamics whilst for a stochastic island model with migration from other habitats, the approximation retains high macroscopic accuracy under a wide range of scenarios in a dynamic environment."}],"date_published":"2021-12-01T00:00:00Z","status":"public","intvolume":"        17","publisher":"Public Library of Science","type":"journal_article","quality_controlled":"1","article_number":"e1009661","scopus_import":"1","has_accepted_license":"1","citation":{"ama":"Bodova K, Szep E, Barton NH. Dynamic maximum entropy provides accurate approximation of structured population dynamics. <i>PLoS Computational Biology</i>. 2021;17(12). doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1009661\">10.1371/journal.pcbi.1009661</a>","ieee":"K. Bodova, E. Szep, and N. H. Barton, “Dynamic maximum entropy provides accurate approximation of structured population dynamics,” <i>PLoS Computational Biology</i>, vol. 17, no. 12. Public Library of Science, 2021.","ista":"Bodova K, Szep E, Barton NH. 2021. Dynamic maximum entropy provides accurate approximation of structured population dynamics. PLoS Computational Biology. 17(12), e1009661.","mla":"Bodova, Katarina, et al. “Dynamic Maximum Entropy Provides Accurate Approximation of Structured Population Dynamics.” <i>PLoS Computational Biology</i>, vol. 17, no. 12, e1009661, Public Library of Science, 2021, doi:<a href=\"https://doi.org/10.1371/journal.pcbi.1009661\">10.1371/journal.pcbi.1009661</a>.","chicago":"Bodova, Katarina, Eniko Szep, and Nicholas H Barton. “Dynamic Maximum Entropy Provides Accurate Approximation of Structured Population Dynamics.” <i>PLoS Computational Biology</i>. Public Library of Science, 2021. <a href=\"https://doi.org/10.1371/journal.pcbi.1009661\">https://doi.org/10.1371/journal.pcbi.1009661</a>.","apa":"Bodova, K., Szep, E., &#38; Barton, N. H. (2021). Dynamic maximum entropy provides accurate approximation of structured population dynamics. <i>PLoS Computational Biology</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.pcbi.1009661\">https://doi.org/10.1371/journal.pcbi.1009661</a>","short":"K. Bodova, E. Szep, N.H. Barton, PLoS Computational Biology 17 (2021)."},"_id":"10535","file_date_updated":"2022-05-16T08:53:11Z","author":[{"orcid":"0000-0002-7214-0171","id":"2BA24EA0-F248-11E8-B48F-1D18A9856A87","last_name":"Bod'ová","first_name":"Katarína","full_name":"Bod'ová, Katarína"},{"first_name":"Eniko","last_name":"Szep","id":"485BB5A4-F248-11E8-B48F-1D18A9856A87","full_name":"Szep, Eniko"},{"full_name":"Barton, Nicholas H","first_name":"Nicholas H","orcid":"0000-0002-8548-5240","id":"4880FE40-F248-11E8-B48F-1D18A9856A87","last_name":"Barton"}],"article_processing_charge":"No","date_created":"2021-12-12T23:01:27Z","acknowledgement":"Computational resources for the study were provided by the Institute of Science and Technology, Austria.\r\nKB received funding from the Scientific Grant Agency of the Slovak Republic under the Grants Nos. 1/0755/19 and 1/0521/20.","acknowledged_ssus":[{"_id":"ScienComp"}],"publication_identifier":{"issn":["1553-734X"],"eissn":["1553-7358"]},"department":[{"_id":"NiBa"},{"_id":"GaTk"}],"volume":17,"title":"Dynamic maximum entropy provides accurate approximation of structured population dynamics","external_id":{"arxiv":["2102.03669"],"pmid":["34851948"]},"article_type":"original","publication":"PLoS Computational Biology","year":"2021"},{"oa_version":"Published Version","date_updated":"2023-08-17T06:20:32Z","language":[{"iso":"eng"}],"oa":1,"day":"18","file":[{"relation":"main_file","content_type":"application/pdf","access_level":"open_access","creator":"alisjak","date_updated":"2021-12-13T13:32:37Z","file_name":"2021_Frontiers_Stefanescu.pdf","file_size":9245199,"success":1,"checksum":"56cbac80e6891ce750511a30161b7792","file_id":"10539","date_created":"2021-12-13T13:32:37Z"}],"ddc":["610"],"publication_status":"published","abstract":[{"text":"TGFβ overexpression is commonly detected in cancer patients and correlates with poor prognosis and metastasis. Cancer progression is often associated with an enhanced recruitment of myeloid-derived cells to the tumor microenvironment. Here we show that functional TGFβ-signaling in myeloid cells is required for metastasis to the lungs and the liver. Myeloid-specific deletion of Tgfbr2 resulted in reduced spontaneous lung metastasis, which was associated with a reduction of proinflammatory cytokines in the metastatic microenvironment. Notably, CD8+ T cell depletion in myeloid-specific Tgfbr2-deficient mice rescued lung metastasis. Myeloid-specific Tgfbr2-deficiency resulted in reduced liver metastasis with an almost complete absence of myeloid cells within metastatic foci. On contrary, an accumulation of Tgfβ-responsive myeloid cells was associated with an increased recruitment of monocytes and granulocytes and higher proinflammatory cytokine levels in control mice. Monocytic cells isolated from metastatic livers of Tgfbr2-deficient mice showed increased polarization towards the M1 phenotype, Tnfα and Il-1β expression, reduced levels of M2 markers and reduced production of chemokines responsible for myeloid-cell recruitment. No significant differences in Tgfβ levels were observed at metastatic sites of any model. These data demonstrate that Tgfβ signaling in monocytic myeloid cells suppresses CD8+ T cell activity during lung metastasis, while these cells actively contribute to tumor growth during liver metastasis. Thus, myeloid cells modulate metastasis through different mechanisms in a tissue-specific manner.","lang":"eng"}],"date_published":"2021-11-18T00:00:00Z","status":"public","month":"11","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","pmid":1,"doi":"10.3389/fonc.2021.765151","quality_controlled":"1","article_number":"765151","scopus_import":"1","has_accepted_license":"1","citation":{"short":"C. Stefanescu, M. Van Gogh, M. Roblek, M. Heikenwalder, L. Borsig, Frontiers in Oncology 11 (2021).","apa":"Stefanescu, C., Van Gogh, M., Roblek, M., Heikenwalder, M., &#38; Borsig, L. (2021). TGFβ signaling in myeloid cells promotes lung and liver metastasis through different mechanisms. <i>Frontiers in Oncology</i>. Frontiers. <a href=\"https://doi.org/10.3389/fonc.2021.765151\">https://doi.org/10.3389/fonc.2021.765151</a>","chicago":"Stefanescu, Cristina, Merel Van Gogh, Marko Roblek, Mathias Heikenwalder, and Lubor Borsig. “TGFβ Signaling in Myeloid Cells Promotes Lung and Liver Metastasis through Different Mechanisms.” <i>Frontiers in Oncology</i>. Frontiers, 2021. <a href=\"https://doi.org/10.3389/fonc.2021.765151\">https://doi.org/10.3389/fonc.2021.765151</a>.","ista":"Stefanescu C, Van Gogh M, Roblek M, Heikenwalder M, Borsig L. 2021. TGFβ signaling in myeloid cells promotes lung and liver metastasis through different mechanisms. Frontiers in Oncology. 11, 765151.","mla":"Stefanescu, Cristina, et al. “TGFβ Signaling in Myeloid Cells Promotes Lung and Liver Metastasis through Different Mechanisms.” <i>Frontiers in Oncology</i>, vol. 11, 765151, Frontiers, 2021, doi:<a href=\"https://doi.org/10.3389/fonc.2021.765151\">10.3389/fonc.2021.765151</a>.","ieee":"C. Stefanescu, M. Van Gogh, M. Roblek, M. Heikenwalder, and L. Borsig, “TGFβ signaling in myeloid cells promotes lung and liver metastasis through different mechanisms,” <i>Frontiers in Oncology</i>, vol. 11. Frontiers, 2021.","ama":"Stefanescu C, Van Gogh M, Roblek M, Heikenwalder M, Borsig L. TGFβ signaling in myeloid cells promotes lung and liver metastasis through different mechanisms. <i>Frontiers in Oncology</i>. 2021;11. doi:<a href=\"https://doi.org/10.3389/fonc.2021.765151\">10.3389/fonc.2021.765151</a>"},"file_date_updated":"2021-12-13T13:32:37Z","_id":"10536","author":[{"first_name":"Cristina","last_name":"Stefanescu","full_name":"Stefanescu, Cristina"},{"full_name":"Van Gogh, Merel","last_name":"Van Gogh","first_name":"Merel"},{"first_name":"Marko","last_name":"Roblek","id":"3047D808-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-9588-1389","full_name":"Roblek, Marko"},{"full_name":"Heikenwalder, Mathias","first_name":"Mathias","last_name":"Heikenwalder"},{"full_name":"Borsig, Lubor","first_name":"Lubor","last_name":"Borsig"}],"intvolume":"        11","publisher":"Frontiers","isi":1,"type":"journal_article","volume":11,"title":"TGFβ signaling in myeloid cells promotes lung and liver metastasis through different mechanisms","external_id":{"pmid":["34868988"],"isi":["000726603400001"]},"article_type":"original","publication":"Frontiers in Oncology","year":"2021","article_processing_charge":"No","acknowledgement":"The authors acknowledge the assistance of the Laboratory Animal Services Center (LASC) – UZH, Center for Microscopy and Image Analysis, and the Flow Cytometry Center of the University of Zurich.","date_created":"2021-12-12T23:01:27Z","publication_identifier":{"eissn":["2234-943X"]},"department":[{"_id":"DaSi"}]},{"page":"343-452","article_type":"original","external_id":{"arxiv":["1908.02273"],"isi":["000668431200001"]},"title":"Optimal homogenization rates in stochastic homogenization of nonlinear uniformly elliptic equations and systems","volume":242,"year":"2021","publication":"Archive for Rational Mechanics and Analysis","date_created":"2021-12-16T12:12:33Z","acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). SN acknowledges partial support by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) – project number 405009441.","article_processing_charge":"Yes (via OA deal)","publication_identifier":{"issn":["0003-9527"],"eissn":["1432-0673"]},"department":[{"_id":"JuFi"}],"has_accepted_license":"1","quality_controlled":"1","scopus_import":"1","citation":{"apa":"Fischer, J. L., &#38; Neukamm, S. (2021). Optimal homogenization rates in stochastic homogenization of nonlinear uniformly elliptic equations and systems. <i>Archive for Rational Mechanics and Analysis</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00205-021-01686-9\">https://doi.org/10.1007/s00205-021-01686-9</a>","short":"J.L. Fischer, S. Neukamm, Archive for Rational Mechanics and Analysis 242 (2021) 343–452.","chicago":"Fischer, Julian L, and Stefan Neukamm. “Optimal Homogenization Rates in Stochastic Homogenization of Nonlinear Uniformly Elliptic Equations and Systems.” <i>Archive for Rational Mechanics and Analysis</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s00205-021-01686-9\">https://doi.org/10.1007/s00205-021-01686-9</a>.","ieee":"J. L. Fischer and S. Neukamm, “Optimal homogenization rates in stochastic homogenization of nonlinear uniformly elliptic equations and systems,” <i>Archive for Rational Mechanics and Analysis</i>, vol. 242, no. 1. Springer Nature, pp. 343–452, 2021.","ista":"Fischer JL, Neukamm S. 2021. Optimal homogenization rates in stochastic homogenization of nonlinear uniformly elliptic equations and systems. Archive for Rational Mechanics and Analysis. 242(1), 343–452.","mla":"Fischer, Julian L., and Stefan Neukamm. “Optimal Homogenization Rates in Stochastic Homogenization of Nonlinear Uniformly Elliptic Equations and Systems.” <i>Archive for Rational Mechanics and Analysis</i>, vol. 242, no. 1, Springer Nature, 2021, pp. 343–452, doi:<a href=\"https://doi.org/10.1007/s00205-021-01686-9\">10.1007/s00205-021-01686-9</a>.","ama":"Fischer JL, Neukamm S. Optimal homogenization rates in stochastic homogenization of nonlinear uniformly elliptic equations and systems. <i>Archive for Rational Mechanics and Analysis</i>. 2021;242(1):343-452. doi:<a href=\"https://doi.org/10.1007/s00205-021-01686-9\">10.1007/s00205-021-01686-9</a>"},"keyword":["Mechanical Engineering","Mathematics (miscellaneous)","Analysis"],"author":[{"orcid":"0000-0002-0479-558X","id":"2C12A0B0-F248-11E8-B48F-1D18A9856A87","last_name":"Fischer","first_name":"Julian L","full_name":"Fischer, Julian L"},{"full_name":"Neukamm, Stefan","last_name":"Neukamm","first_name":"Stefan"}],"file_date_updated":"2021-12-16T14:58:08Z","_id":"10549","intvolume":"       242","publisher":"Springer Nature","type":"journal_article","isi":1,"publication_status":"published","abstract":[{"text":"We derive optimal-order homogenization rates for random nonlinear elliptic PDEs with monotone nonlinearity in the uniformly elliptic case. More precisely, for a random monotone operator on \\mathbb {R}^d with stationary law (that is spatially homogeneous statistics) and fast decay of correlations on scales larger than the microscale \\varepsilon >0, we establish homogenization error estimates of the order \\varepsilon in case d\\geqq 3, and of the order \\varepsilon |\\log \\varepsilon |^{1/2} in case d=2. Previous results in nonlinear stochastic homogenization have been limited to a small algebraic rate of convergence \\varepsilon ^\\delta . We also establish error estimates for the approximation of the homogenized operator by the method of representative volumes of the order (L/\\varepsilon )^{-d/2} for a representative volume of size L. Our results also hold in the case of systems for which a (small-scale) C^{1,\\alpha } regularity theory is available.","lang":"eng"}],"ddc":["530"],"date_published":"2021-06-30T00:00:00Z","status":"public","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"month":"06","doi":"10.1007/s00205-021-01686-9","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","issue":"1","date_updated":"2023-08-17T06:23:21Z","oa_version":"Published Version","arxiv":1,"language":[{"iso":"eng"}],"oa":1,"day":"30","file":[{"file_name":"2021_ArchRatMechAnalysis_Fischer.pdf","file_size":1640121,"success":1,"checksum":"cc830b739aed83ca2e32c4e0ce266a4c","file_id":"10558","date_created":"2021-12-16T14:58:08Z","relation":"main_file","content_type":"application/pdf","access_level":"open_access","creator":"cchlebak","date_updated":"2021-12-16T14:58:08Z"}]},{"intvolume":"        33","publisher":"World Scientific Publishing","type":"journal_article","isi":1,"scopus_import":"1","quality_controlled":"1","article_number":"2060006","citation":{"ama":"Boccato C. The excitation spectrum of the Bose gas in the Gross-Pitaevskii regime. <i>Reviews in Mathematical Physics</i>. 2021;33(1). doi:<a href=\"https://doi.org/10.1142/S0129055X20600065\">10.1142/S0129055X20600065</a>","ieee":"C. Boccato, “The excitation spectrum of the Bose gas in the Gross-Pitaevskii regime,” <i>Reviews in Mathematical Physics</i>, vol. 33, no. 1. World Scientific Publishing, 2021.","ista":"Boccato C. 2021. The excitation spectrum of the Bose gas in the Gross-Pitaevskii regime. Reviews in Mathematical Physics. 33(1), 2060006.","mla":"Boccato, Chiara. “The Excitation Spectrum of the Bose Gas in the Gross-Pitaevskii Regime.” <i>Reviews in Mathematical Physics</i>, vol. 33, no. 1, 2060006, World Scientific Publishing, 2021, doi:<a href=\"https://doi.org/10.1142/S0129055X20600065\">10.1142/S0129055X20600065</a>.","chicago":"Boccato, Chiara. “The Excitation Spectrum of the Bose Gas in the Gross-Pitaevskii Regime.” <i>Reviews in Mathematical Physics</i>. World Scientific Publishing, 2021. <a href=\"https://doi.org/10.1142/S0129055X20600065\">https://doi.org/10.1142/S0129055X20600065</a>.","apa":"Boccato, C. (2021). The excitation spectrum of the Bose gas in the Gross-Pitaevskii regime. <i>Reviews in Mathematical Physics</i>. World Scientific Publishing. <a href=\"https://doi.org/10.1142/S0129055X20600065\">https://doi.org/10.1142/S0129055X20600065</a>","short":"C. Boccato, Reviews in Mathematical Physics 33 (2021)."},"author":[{"full_name":"Boccato, Chiara","first_name":"Chiara","last_name":"Boccato","id":"342E7E22-F248-11E8-B48F-1D18A9856A87"}],"_id":"7685","date_created":"2020-04-26T22:00:45Z","article_processing_charge":"No","publication_identifier":{"issn":["0129-055X"]},"department":[{"_id":"RoSe"}],"title":"The excitation spectrum of the Bose gas in the Gross-Pitaevskii regime","article_type":"original","external_id":{"isi":["000613313200007"],"arxiv":["2001.00497"]},"volume":33,"year":"2021","publication":"Reviews in Mathematical Physics","project":[{"name":"Analysis of quantum many-body systems","_id":"25C6DC12-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","grant_number":"694227"}],"day":"01","issue":"1","date_updated":"2025-05-14T10:49:57Z","oa_version":"Preprint","arxiv":1,"ec_funded":1,"oa":1,"language":[{"iso":"eng"}],"month":"01","main_file_link":[{"url":"https://arxiv.org/abs/2001.00497","open_access":"1"}],"doi":"10.1142/S0129055X20600065","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","publication_status":"published","abstract":[{"text":"We consider a gas of interacting bosons trapped in a box of side length one in the Gross–Pitaevskii limit. We review the proof of the validity of Bogoliubov’s prediction for the ground state energy and the low-energy excitation spectrum. This note is based on joint work with C. Brennecke, S. Cenatiempo and B. Schlein.","lang":"eng"}],"date_published":"2021-01-01T00:00:00Z","status":"public"},{"title":"Bosonic collective excitations in Fermi gases","external_id":{"isi":["000613313200010"],"arxiv":["1910.08190"]},"article_type":"original","volume":33,"year":"2021","project":[{"name":"Analysis of quantum many-body systems","_id":"25C6DC12-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","grant_number":"694227"}],"publication":"Reviews in Mathematical Physics","department":[{"_id":"RoSe"}],"date_created":"2020-05-28T16:47:55Z","article_processing_charge":"No","publication_identifier":{"eissn":["1793-6659"],"issn":["0129-055X"]},"author":[{"first_name":"Niels P","orcid":"0000-0002-1071-6091","id":"3DE6C32A-F248-11E8-B48F-1D18A9856A87","last_name":"Benedikter","full_name":"Benedikter, Niels P"}],"_id":"7900","article_number":"2060009","scopus_import":"1","quality_controlled":"1","citation":{"ama":"Benedikter NP. Bosonic collective excitations in Fermi gases. <i>Reviews in Mathematical Physics</i>. 2021;33(1). doi:<a href=\"https://doi.org/10.1142/s0129055x20600090\">10.1142/s0129055x20600090</a>","ista":"Benedikter NP. 2021. Bosonic collective excitations in Fermi gases. Reviews in Mathematical Physics. 33(1), 2060009.","ieee":"N. P. Benedikter, “Bosonic collective excitations in Fermi gases,” <i>Reviews in Mathematical Physics</i>, vol. 33, no. 1. World Scientific Publishing, 2021.","mla":"Benedikter, Niels P. “Bosonic Collective Excitations in Fermi Gases.” <i>Reviews in Mathematical Physics</i>, vol. 33, no. 1, 2060009, World Scientific Publishing, 2021, doi:<a href=\"https://doi.org/10.1142/s0129055x20600090\">10.1142/s0129055x20600090</a>.","chicago":"Benedikter, Niels P. “Bosonic Collective Excitations in Fermi Gases.” <i>Reviews in Mathematical Physics</i>. World Scientific Publishing, 2021. <a href=\"https://doi.org/10.1142/s0129055x20600090\">https://doi.org/10.1142/s0129055x20600090</a>.","short":"N.P. Benedikter, Reviews in Mathematical Physics 33 (2021).","apa":"Benedikter, N. P. (2021). Bosonic collective excitations in Fermi gases. <i>Reviews in Mathematical Physics</i>. World Scientific Publishing. <a href=\"https://doi.org/10.1142/s0129055x20600090\">https://doi.org/10.1142/s0129055x20600090</a>"},"type":"journal_article","isi":1,"intvolume":"        33","publisher":"World Scientific Publishing","date_published":"2021-01-01T00:00:00Z","status":"public","abstract":[{"text":"Hartree–Fock theory has been justified as a mean-field approximation for fermionic systems. However, it suffers from some defects in predicting physical properties, making necessary a theory of quantum correlations. Recently, bosonization of many-body correlations has been rigorously justified as an upper bound on the correlation energy at high density with weak interactions. We review the bosonic approximation, deriving an effective Hamiltonian. We then show that for systems with Coulomb interaction this effective theory predicts collective excitations (plasmons) in accordance with the random phase approximation of Bohm and Pines, and with experimental observation.","lang":"eng"}],"publication_status":"published","doi":"10.1142/s0129055x20600090","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"01","main_file_link":[{"url":"https://arxiv.org/abs/1910.08190","open_access":"1"}],"language":[{"iso":"eng"}],"ec_funded":1,"oa":1,"issue":"1","oa_version":"Preprint","date_updated":"2025-05-14T10:49:46Z","arxiv":1,"day":"01"},{"oa_version":"Published Version","date_updated":"2025-04-14T07:27:00Z","arxiv":1,"ec_funded":1,"oa":1,"language":[{"iso":"eng"}],"day":"03","file":[{"success":1,"file_name":"2021_InventMath_Benedikter.pdf","file_size":1089319,"checksum":"f38c79dfd828cdc7f49a34b37b83d376","date_created":"2022-05-16T12:23:40Z","file_id":"11386","content_type":"application/pdf","relation":"main_file","creator":"dernst","access_level":"open_access","date_updated":"2022-05-16T12:23:40Z"}],"publication_status":"published","abstract":[{"text":"We derive rigorously the leading order of the correlation energy of a Fermi gas in a scaling regime of high density and weak interaction. The result verifies the prediction of the random-phase approximation. Our proof refines the method of collective bosonization in three dimensions. We approximately diagonalize an effective Hamiltonian describing approximately bosonic collective excitations around the Hartree–Fock state, while showing that gapless and non-collective excitations have only a negligible effect on the ground state energy.","lang":"eng"}],"ddc":["510"],"date_published":"2021-05-03T00:00:00Z","status":"public","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"month":"05","doi":"10.1007/s00222-021-01041-5","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","has_accepted_license":"1","scopus_import":"1","quality_controlled":"1","citation":{"short":"N.P. Benedikter, P.T. Nam, M. Porta, B. Schlein, R. Seiringer, Inventiones Mathematicae 225 (2021) 885–979.","apa":"Benedikter, N. P., Nam, P. T., Porta, M., Schlein, B., &#38; Seiringer, R. (2021). Correlation energy of a weakly interacting Fermi gas. <i>Inventiones Mathematicae</i>. Springer. <a href=\"https://doi.org/10.1007/s00222-021-01041-5\">https://doi.org/10.1007/s00222-021-01041-5</a>","chicago":"Benedikter, Niels P, Phan Thành Nam, Marcello Porta, Benjamin Schlein, and Robert Seiringer. “Correlation Energy of a Weakly Interacting Fermi Gas.” <i>Inventiones Mathematicae</i>. Springer, 2021. <a href=\"https://doi.org/10.1007/s00222-021-01041-5\">https://doi.org/10.1007/s00222-021-01041-5</a>.","ista":"Benedikter NP, Nam PT, Porta M, Schlein B, Seiringer R. 2021. Correlation energy of a weakly interacting Fermi gas. Inventiones Mathematicae. 225, 885–979.","ieee":"N. P. Benedikter, P. T. Nam, M. Porta, B. Schlein, and R. Seiringer, “Correlation energy of a weakly interacting Fermi gas,” <i>Inventiones Mathematicae</i>, vol. 225. Springer, pp. 885–979, 2021.","mla":"Benedikter, Niels P., et al. “Correlation Energy of a Weakly Interacting Fermi Gas.” <i>Inventiones Mathematicae</i>, vol. 225, Springer, 2021, pp. 885–979, doi:<a href=\"https://doi.org/10.1007/s00222-021-01041-5\">10.1007/s00222-021-01041-5</a>.","ama":"Benedikter NP, Nam PT, Porta M, Schlein B, Seiringer R. Correlation energy of a weakly interacting Fermi gas. <i>Inventiones Mathematicae</i>. 2021;225:885-979. doi:<a href=\"https://doi.org/10.1007/s00222-021-01041-5\">10.1007/s00222-021-01041-5</a>"},"author":[{"full_name":"Benedikter, Niels P","first_name":"Niels P","orcid":"0000-0002-1071-6091","id":"3DE6C32A-F248-11E8-B48F-1D18A9856A87","last_name":"Benedikter"},{"last_name":"Nam","first_name":"Phan Thành","full_name":"Nam, Phan Thành"},{"full_name":"Porta, Marcello","last_name":"Porta","first_name":"Marcello"},{"full_name":"Schlein, Benjamin","last_name":"Schlein","first_name":"Benjamin"},{"full_name":"Seiringer, Robert","first_name":"Robert","orcid":"0000-0002-6781-0521","last_name":"Seiringer","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87"}],"_id":"7901","file_date_updated":"2022-05-16T12:23:40Z","intvolume":"       225","publisher":"Springer","type":"journal_article","isi":1,"page":"885-979","title":"Correlation energy of a weakly interacting Fermi gas","external_id":{"isi":["000646573600001"],"arxiv":["2005.08933"]},"article_type":"original","volume":225,"year":"2021","project":[{"name":"IST Austria Open Access Fund","_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854"},{"call_identifier":"H2020","grant_number":"694227","_id":"25C6DC12-B435-11E9-9278-68D0E5697425","name":"Analysis of quantum many-body systems"}],"publication":"Inventiones Mathematicae","date_created":"2020-05-28T16:48:20Z","acknowledgement":"We thank Christian Hainzl for helpful discussions and a referee for very careful reading of the paper and many helpful suggestions. NB and RS were supported by the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (grant agreement No. 694227). Part of the research of NB was conducted on the RZD18 Nice–Milan–Vienna–Moscow. NB thanks Elliott H. Lieb and Peter Otte for explanations about the Luttinger model. PTN has received funding from the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) under Germany’s Excellence Strategy (EXC-2111-390814868). MP acknowledges financial support from the European Research Council (ERC) under the European Union’s Horizon 2020 research and innovation programme (ERC StG MaMBoQ, grant agreement No. 802901). BS gratefully acknowledges financial support from the NCCR SwissMAP, from the Swiss National Science Foundation through the Grant “Dynamical and energetic properties of Bose-Einstein condensates” and from the European Research Council through the ERC-AdG CLaQS (grant agreement No. 834782). All authors acknowledge support for workshop participation from Mathematisches Forschungsinstitut Oberwolfach (Leibniz Association). NB, PTN, BS, and RS acknowledge support for workshop participation from Fondation des Treilles.","article_processing_charge":"Yes (via OA deal)","publication_identifier":{"eissn":["1432-1297"],"issn":["0020-9910"]},"department":[{"_id":"RoSe"}]},{"tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"month":"06","doi":"10.1007/s00454-020-00206-y","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","publication_status":"published","abstract":[{"text":"We investigate a sheaf-theoretic interpretation of stratification learning from geometric and topological perspectives. Our main result is the construction of stratification learning algorithms framed in terms of a sheaf on a partially ordered set with the Alexandroff topology. We prove that the resulting decomposition is the unique minimal stratification for which the strata are homogeneous and the given sheaf is constructible. In particular, when we choose to work with the local homology sheaf, our algorithm gives an alternative to the local homology transfer algorithm given in Bendich et al. (Proceedings of the 23rd Annual ACM-SIAM Symposium on Discrete Algorithms, pp. 1355–1370, ACM, New York, 2012), and the cohomology stratification algorithm given in Nanda (Found. Comput. Math. 20(2), 195–222, 2020). Additionally, we give examples of stratifications based on the geometric techniques of Breiding et al. (Rev. Mat. Complut. 31(3), 545–593, 2018), illustrating how the sheaf-theoretic approach can be used to study stratifications from both topological and geometric perspectives. This approach also points toward future applications of sheaf theory in the study of topological data analysis by illustrating the utility of the language of sheaf theory in generalizing existing algorithms.","lang":"eng"}],"ddc":["510"],"date_published":"2021-06-01T00:00:00Z","status":"public","day":"01","corr_author":"1","file":[{"access_level":"open_access","creator":"dernst","date_updated":"2020-11-25T09:06:41Z","relation":"main_file","content_type":"application/pdf","checksum":"487a84ea5841b75f04f66d7ebd71b67e","file_id":"8803","date_created":"2020-11-25T09:06:41Z","file_size":1013730,"file_name":"2020_DiscreteCompGeometry_Brown.pdf","success":1}],"date_updated":"2025-04-15T06:53:15Z","oa_version":"Published Version","arxiv":1,"language":[{"iso":"eng"}],"oa":1,"acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). This work was partially supported by NSF IIS-1513616 and NSF ABI-1661375. The authors would like to thank the anonymous referees for their insightful comments.","date_created":"2020-05-30T10:26:04Z","article_processing_charge":"Yes (via OA deal)","publication_identifier":{"issn":["0179-5376"],"eissn":["1432-0444"]},"department":[{"_id":"HeEd"}],"page":"1166-1198","article_type":"original","external_id":{"isi":["000536324700001"],"arxiv":["1712.07734"]},"title":"Sheaf-theoretic stratification learning from geometric and topological perspectives","volume":65,"year":"2021","publication":"Discrete and Computational Geometry","project":[{"_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854","name":"IST Austria Open Access Fund"}],"intvolume":"        65","publisher":"Springer Nature","type":"journal_article","isi":1,"has_accepted_license":"1","quality_controlled":"1","scopus_import":"1","citation":{"ama":"Brown A, Wang B. Sheaf-theoretic stratification learning from geometric and topological perspectives. <i>Discrete and Computational Geometry</i>. 2021;65:1166-1198. doi:<a href=\"https://doi.org/10.1007/s00454-020-00206-y\">10.1007/s00454-020-00206-y</a>","mla":"Brown, Adam, and Bei Wang. “Sheaf-Theoretic Stratification Learning from Geometric and Topological Perspectives.” <i>Discrete and Computational Geometry</i>, vol. 65, Springer Nature, 2021, pp. 1166–98, doi:<a href=\"https://doi.org/10.1007/s00454-020-00206-y\">10.1007/s00454-020-00206-y</a>.","ieee":"A. Brown and B. Wang, “Sheaf-theoretic stratification learning from geometric and topological perspectives,” <i>Discrete and Computational Geometry</i>, vol. 65. Springer Nature, pp. 1166–1198, 2021.","ista":"Brown A, Wang B. 2021. Sheaf-theoretic stratification learning from geometric and topological perspectives. Discrete and Computational Geometry. 65, 1166–1198.","chicago":"Brown, Adam, and Bei Wang. “Sheaf-Theoretic Stratification Learning from Geometric and Topological Perspectives.” <i>Discrete and Computational Geometry</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s00454-020-00206-y\">https://doi.org/10.1007/s00454-020-00206-y</a>.","short":"A. Brown, B. Wang, Discrete and Computational Geometry 65 (2021) 1166–1198.","apa":"Brown, A., &#38; Wang, B. (2021). Sheaf-theoretic stratification learning from geometric and topological perspectives. <i>Discrete and Computational Geometry</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00454-020-00206-y\">https://doi.org/10.1007/s00454-020-00206-y</a>"},"author":[{"first_name":"Adam","last_name":"Brown","id":"70B7FDF6-608D-11E9-9333-8535E6697425","full_name":"Brown, Adam"},{"first_name":"Bei","last_name":"Wang","full_name":"Wang, Bei"}],"file_date_updated":"2020-11-25T09:06:41Z","_id":"7905"},{"publication_status":"published","abstract":[{"lang":"eng","text":"In this paper, we introduce a relaxed CQ method with alternated inertial step for solving split feasibility problems. We give convergence of the sequence generated by our method under some suitable assumptions. Some numerical implementations from sparse signal and image deblurring are reported to show the efficiency of our method."}],"ddc":["510"],"status":"public","date_published":"2021-09-01T00:00:00Z","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"month":"09","doi":"10.1007/s11590-020-01603-1","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","date_updated":"2024-11-04T13:52:35Z","oa_version":"Published Version","ec_funded":1,"language":[{"iso":"eng"}],"oa":1,"day":"01","file":[{"content_type":"application/pdf","relation":"main_file","date_updated":"2024-03-07T14:58:51Z","creator":"kschuh","access_level":"open_access","success":1,"file_name":"2021_OptimizationLetters_Shehu.pdf","file_size":2148882,"date_created":"2024-03-07T14:58:51Z","file_id":"15089","checksum":"63c5f31cd04626152a19f97a2476281b"}],"corr_author":"1","page":"2109-2126","year":"2021","project":[{"grant_number":"616160","call_identifier":"FP7","_id":"25FBA906-B435-11E9-9278-68D0E5697425","name":"Discrete Optimization in Computer Vision: Theory and Practice"},{"_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854","name":"IST Austria Open Access Fund"}],"publication":"Optimization Letters","article_type":"original","title":"New inertial relaxed method for solving split feasibilities","external_id":{"isi":["000537342300001"]},"volume":15,"publication_identifier":{"eissn":["1862-4480"],"issn":["1862-4472"]},"date_created":"2020-06-04T11:28:33Z","acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). The authors are grateful to the referees for their insightful comments which have improved the earlier version of the manuscript greatly. The first author has received funding from the European Research Council (ERC) under the European Union’s Seventh Framework Program (FP7-2007-2013) (Grant agreement No. 616160).","article_processing_charge":"Yes (via OA deal)","department":[{"_id":"VlKo"}],"citation":{"apa":"Shehu, Y., &#38; Gibali, A. (2021). New inertial relaxed method for solving split feasibilities. <i>Optimization Letters</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s11590-020-01603-1\">https://doi.org/10.1007/s11590-020-01603-1</a>","short":"Y. Shehu, A. Gibali, Optimization Letters 15 (2021) 2109–2126.","chicago":"Shehu, Yekini, and Aviv Gibali. “New Inertial Relaxed Method for Solving Split Feasibilities.” <i>Optimization Letters</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s11590-020-01603-1\">https://doi.org/10.1007/s11590-020-01603-1</a>.","ista":"Shehu Y, Gibali A. 2021. New inertial relaxed method for solving split feasibilities. Optimization Letters. 15, 2109–2126.","ieee":"Y. Shehu and A. Gibali, “New inertial relaxed method for solving split feasibilities,” <i>Optimization Letters</i>, vol. 15. Springer Nature, pp. 2109–2126, 2021.","mla":"Shehu, Yekini, and Aviv Gibali. “New Inertial Relaxed Method for Solving Split Feasibilities.” <i>Optimization Letters</i>, vol. 15, Springer Nature, 2021, pp. 2109–26, doi:<a href=\"https://doi.org/10.1007/s11590-020-01603-1\">10.1007/s11590-020-01603-1</a>.","ama":"Shehu Y, Gibali A. New inertial relaxed method for solving split feasibilities. <i>Optimization Letters</i>. 2021;15:2109-2126. doi:<a href=\"https://doi.org/10.1007/s11590-020-01603-1\">10.1007/s11590-020-01603-1</a>"},"has_accepted_license":"1","scopus_import":"1","quality_controlled":"1","author":[{"full_name":"Shehu, Yekini","first_name":"Yekini","orcid":"0000-0001-9224-7139","last_name":"Shehu","id":"3FC7CB58-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Gibali, Aviv","first_name":"Aviv","last_name":"Gibali"}],"_id":"7925","file_date_updated":"2024-03-07T14:58:51Z","publisher":"Springer Nature","intvolume":"        15","type":"journal_article","isi":1},{"abstract":[{"lang":"eng","text":"We design fast deterministic algorithms for distance computation in the Congested Clique model. Our key contributions include:\r\n    A (2+ϵ)-approximation for all-pairs shortest paths in O(log2n/ϵ) rounds on unweighted undirected graphs. With a small additional additive factor, this also applies for weighted graphs. This is the first sub-polynomial constant-factor approximation for APSP in this model.\r\n    A (1+ϵ)-approximation for multi-source shortest paths from O(n−−√) sources in O(log2n/ϵ) rounds on weighted undirected graphs. This is the first sub-polynomial algorithm obtaining this approximation for a set of sources of polynomial size.\r\n\r\nOur main techniques are new distance tools that are obtained via improved algorithms for sparse matrix multiplication, which we leverage to construct efficient hopsets and shortest paths. Furthermore, our techniques extend to additional distance problems for which we improve upon the state-of-the-art, including diameter approximation, and an exact single-source shortest paths algorithm for weighted undirected graphs in O~(n1/6) rounds. "}],"publication_status":"published","date_published":"2021-12-01T00:00:00Z","status":"public","month":"12","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1007/s00446-020-00380-5"}],"doi":"10.1007/s00446-020-00380-5","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","date_updated":"2025-04-15T06:53:15Z","arxiv":1,"language":[{"iso":"eng"}],"oa":1,"day":"01","corr_author":"1","page":"463-487","related_material":{"record":[{"status":"public","id":"6933","relation":"earlier_version"}]},"external_id":{"isi":["000556444600001"],"arxiv":["1903.05956"]},"title":"Fast approximate shortest paths in the congested clique","article_type":"original","volume":34,"year":"2021","publication":"Distributed Computing","project":[{"name":"IST Austria Open Access Fund","_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854"}],"acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). We thank Mohsen Ghaffari, Michael Elkin and Merav Parter for fruitful discussions. This project has received funding from the European Union’s Horizon 2020 Research And Innovation Program under Grant Agreement No. 755839.","date_created":"2020-06-07T22:00:54Z","article_processing_charge":"Yes (via OA deal)","publication_identifier":{"issn":["0178-2770"],"eissn":["1432-0452"]},"department":[{"_id":"DaAl"}],"quality_controlled":"1","scopus_import":"1","citation":{"chicago":"Censor-Hillel, Keren, Michal Dory, Janne Korhonen, and Dean Leitersdorf. “Fast Approximate Shortest Paths in the Congested Clique.” <i>Distributed Computing</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s00446-020-00380-5\">https://doi.org/10.1007/s00446-020-00380-5</a>.","short":"K. Censor-Hillel, M. Dory, J. Korhonen, D. Leitersdorf, Distributed Computing 34 (2021) 463–487.","apa":"Censor-Hillel, K., Dory, M., Korhonen, J., &#38; Leitersdorf, D. (2021). Fast approximate shortest paths in the congested clique. <i>Distributed Computing</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00446-020-00380-5\">https://doi.org/10.1007/s00446-020-00380-5</a>","ama":"Censor-Hillel K, Dory M, Korhonen J, Leitersdorf D. Fast approximate shortest paths in the congested clique. <i>Distributed Computing</i>. 2021;34:463-487. doi:<a href=\"https://doi.org/10.1007/s00446-020-00380-5\">10.1007/s00446-020-00380-5</a>","mla":"Censor-Hillel, Keren, et al. “Fast Approximate Shortest Paths in the Congested Clique.” <i>Distributed Computing</i>, vol. 34, Springer Nature, 2021, pp. 463–87, doi:<a href=\"https://doi.org/10.1007/s00446-020-00380-5\">10.1007/s00446-020-00380-5</a>.","ieee":"K. Censor-Hillel, M. Dory, J. Korhonen, and D. Leitersdorf, “Fast approximate shortest paths in the congested clique,” <i>Distributed Computing</i>, vol. 34. Springer Nature, pp. 463–487, 2021.","ista":"Censor-Hillel K, Dory M, Korhonen J, Leitersdorf D. 2021. Fast approximate shortest paths in the congested clique. Distributed Computing. 34, 463–487."},"author":[{"full_name":"Censor-Hillel, Keren","first_name":"Keren","last_name":"Censor-Hillel"},{"last_name":"Dory","first_name":"Michal","full_name":"Dory, Michal"},{"first_name":"Janne","last_name":"Korhonen","id":"C5402D42-15BC-11E9-A202-CA2BE6697425","full_name":"Korhonen, Janne"},{"full_name":"Leitersdorf, Dean","last_name":"Leitersdorf","first_name":"Dean"}],"_id":"7939","intvolume":"        34","publisher":"Springer Nature","type":"journal_article","isi":1},{"type":"book_chapter","intvolume":"       161","publisher":"Elsevier","author":[{"first_name":"Sven M","last_name":"Truckenbrodt","id":"45812BD4-F248-11E8-B48F-1D18A9856A87","full_name":"Truckenbrodt, Sven M"},{"full_name":"Rizzoli, Silvio O.","first_name":"Silvio O.","last_name":"Rizzoli"}],"_id":"7941","scopus_import":"1","quality_controlled":"1","citation":{"ama":"Truckenbrodt SM, Rizzoli SO. Simple multi-color super-resolution by X10 microscopy. In: <i>Methods in Cell Biology</i>. Vol 161. Elsevier; 2021:33-56. doi:<a href=\"https://doi.org/10.1016/bs.mcb.2020.04.016\">10.1016/bs.mcb.2020.04.016</a>","ista":"Truckenbrodt SM, Rizzoli SO. 2021.Simple multi-color super-resolution by X10 microscopy. In: Methods in Cell Biology. vol. 161, 33–56.","ieee":"S. M. Truckenbrodt and S. O. Rizzoli, “Simple multi-color super-resolution by X10 microscopy,” in <i>Methods in Cell Biology</i>, vol. 161, Elsevier, 2021, pp. 33–56.","mla":"Truckenbrodt, Sven M., and Silvio O. Rizzoli. “Simple Multi-Color Super-Resolution by X10 Microscopy.” <i>Methods in Cell Biology</i>, vol. 161, Elsevier, 2021, pp. 33–56, doi:<a href=\"https://doi.org/10.1016/bs.mcb.2020.04.016\">10.1016/bs.mcb.2020.04.016</a>.","chicago":"Truckenbrodt, Sven M, and Silvio O. Rizzoli. “Simple Multi-Color Super-Resolution by X10 Microscopy.” In <i>Methods in Cell Biology</i>, 161:33–56. Elsevier, 2021. <a href=\"https://doi.org/10.1016/bs.mcb.2020.04.016\">https://doi.org/10.1016/bs.mcb.2020.04.016</a>.","short":"S.M. Truckenbrodt, S.O. Rizzoli, in:, Methods in Cell Biology, Elsevier, 2021, pp. 33–56.","apa":"Truckenbrodt, S. M., &#38; Rizzoli, S. O. (2021). Simple multi-color super-resolution by X10 microscopy. In <i>Methods in Cell Biology</i> (Vol. 161, pp. 33–56). Elsevier. <a href=\"https://doi.org/10.1016/bs.mcb.2020.04.016\">https://doi.org/10.1016/bs.mcb.2020.04.016</a>"},"department":[{"_id":"JoDa"}],"date_created":"2020-06-07T22:00:55Z","article_processing_charge":"No","publication_identifier":{"issn":["0091-679X"],"isbn":["978012820807-6"]},"external_id":{"pmid":["33478696"]},"title":"Simple multi-color super-resolution by X10 microscopy","volume":161,"year":"2021","publication":"Methods in Cell Biology","page":"33-56","corr_author":"1","day":"01","language":[{"iso":"eng"}],"date_updated":"2024-10-09T20:59:36Z","oa_version":"None","pmid":1,"doi":"10.1016/bs.mcb.2020.04.016","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","month":"01","date_published":"2021-01-01T00:00:00Z","status":"public","abstract":[{"lang":"eng","text":"Expansion microscopy is a recently developed super-resolution imaging technique, which provides an alternative to optics-based methods such as deterministic approaches (e.g. STED) or stochastic approaches (e.g. PALM/STORM). The idea behind expansion microscopy is to embed the biological sample in a swellable gel, and then to expand it isotropically, thereby increasing the distance between the fluorophores. This approach breaks the diffraction barrier by simply separating the emission point-spread-functions of the fluorophores. The resolution attainable in expansion microscopy is thus directly dependent on the separation that can be achieved, i.e. on the expansion factor. The original implementation of the technique achieved an expansion factor of fourfold, for a resolution of 70–80 nm. The subsequently developed X10 method achieves an expansion factor of 10-fold, for a resolution of 25–30 nm. This technique can be implemented with minimal technical requirements on any standard fluorescence microscope, and is more easily applied for multi-color imaging than either deterministic or stochastic super-resolution approaches. This renders X10 expansion microscopy a highly promising tool for new biological discoveries, as discussed here, and as demonstrated by several recent applications."}],"publication_status":"published"},{"corr_author":"1","file":[{"file_id":"8197","date_created":"2020-08-03T15:24:39Z","file_size":2137860,"file_name":"2020_OptimizationEngineering_Shehu.pdf","success":1,"date_updated":"2020-08-03T15:24:39Z","access_level":"open_access","creator":"dernst","relation":"main_file","content_type":"application/pdf"}],"day":"25","language":[{"iso":"eng"}],"ec_funded":1,"oa":1,"date_updated":"2024-11-04T13:52:38Z","oa_version":"Published Version","doi":"10.1007/s11081-020-09544-5","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"month":"02","date_published":"2021-02-25T00:00:00Z","status":"public","publication_status":"published","abstract":[{"text":"This paper aims to obtain a strong convergence result for a Douglas–Rachford splitting method with inertial extrapolation step for finding a zero of the sum of two set-valued maximal monotone operators without any further assumption of uniform monotonicity on any of the involved maximal monotone operators. Furthermore, our proposed method is easy to implement and the inertial factor in our proposed method is a natural choice. Our method of proof is of independent interest. Finally, some numerical implementations are given to confirm the theoretical analysis.","lang":"eng"}],"ddc":["510"],"type":"journal_article","isi":1,"intvolume":"        22","publisher":"Springer Nature","author":[{"first_name":"Yekini","orcid":"0000-0001-9224-7139","last_name":"Shehu","id":"3FC7CB58-F248-11E8-B48F-1D18A9856A87","full_name":"Shehu, Yekini"},{"full_name":"Dong, Qiao-Li","last_name":"Dong","first_name":"Qiao-Li"},{"first_name":"Lu-Lu","last_name":"Liu","full_name":"Liu, Lu-Lu"},{"full_name":"Yao, Jen-Chih","first_name":"Jen-Chih","last_name":"Yao"}],"_id":"8196","file_date_updated":"2020-08-03T15:24:39Z","has_accepted_license":"1","scopus_import":"1","quality_controlled":"1","citation":{"mla":"Shehu, Yekini, et al. “New Strong Convergence Method for the Sum of Two Maximal Monotone Operators.” <i>Optimization and Engineering</i>, vol. 22, Springer Nature, 2021, pp. 2627–53, doi:<a href=\"https://doi.org/10.1007/s11081-020-09544-5\">10.1007/s11081-020-09544-5</a>.","ieee":"Y. Shehu, Q.-L. Dong, L.-L. Liu, and J.-C. Yao, “New strong convergence method for the sum of two maximal monotone operators,” <i>Optimization and Engineering</i>, vol. 22. Springer Nature, pp. 2627–2653, 2021.","ista":"Shehu Y, Dong Q-L, Liu L-L, Yao J-C. 2021. New strong convergence method for the sum of two maximal monotone operators. Optimization and Engineering. 22, 2627–2653.","ama":"Shehu Y, Dong Q-L, Liu L-L, Yao J-C. New strong convergence method for the sum of two maximal monotone operators. <i>Optimization and Engineering</i>. 2021;22:2627-2653. doi:<a href=\"https://doi.org/10.1007/s11081-020-09544-5\">10.1007/s11081-020-09544-5</a>","short":"Y. Shehu, Q.-L. Dong, L.-L. Liu, J.-C. Yao, Optimization and Engineering 22 (2021) 2627–2653.","apa":"Shehu, Y., Dong, Q.-L., Liu, L.-L., &#38; Yao, J.-C. (2021). New strong convergence method for the sum of two maximal monotone operators. <i>Optimization and Engineering</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s11081-020-09544-5\">https://doi.org/10.1007/s11081-020-09544-5</a>","chicago":"Shehu, Yekini, Qiao-Li Dong, Lu-Lu Liu, and Jen-Chih Yao. “New Strong Convergence Method for the Sum of Two Maximal Monotone Operators.” <i>Optimization and Engineering</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s11081-020-09544-5\">https://doi.org/10.1007/s11081-020-09544-5</a>."},"department":[{"_id":"VlKo"}],"acknowledgement":"Open access funding provided by Institute of Science and Technology (IST Austria). The project of Yekini Shehu has received funding from the European Research Council (ERC) under the European Union’s Seventh Framework Program (FP7—2007–2013) (Grant Agreement No. 616160). The authors are grateful to the anonymous referees and the handling Editor for their comments and suggestions which have improved the earlier version of the manuscript greatly.","date_created":"2020-08-03T14:29:57Z","article_processing_charge":"Yes (via OA deal)","publication_identifier":{"issn":["1389-4420"],"eissn":["1573-2924"]},"external_id":{"isi":["000559345400001"]},"title":"New strong convergence method for the sum of two maximal monotone operators","article_type":"original","volume":22,"year":"2021","publication":"Optimization and Engineering","project":[{"_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854","name":"IST Austria Open Access Fund"},{"_id":"25FBA906-B435-11E9-9278-68D0E5697425","name":"Discrete Optimization in Computer Vision: Theory and Practice","grant_number":"616160","call_identifier":"FP7"}],"page":"2627-2653"},{"volume":66,"title":"Local conditions for triangulating submanifolds of Euclidean space","external_id":{"isi":["000558119300001"]},"article_type":"original","publication":"Discrete and Computational Geometry","project":[{"grant_number":"754411","call_identifier":"H2020","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships"}],"year":"2021","page":"666-686","department":[{"_id":"HeEd"}],"article_processing_charge":"Yes (via OA deal)","date_created":"2020-08-11T07:11:51Z","acknowledgement":"Open access funding provided by the Institute of Science and Technology (IST Austria). Arijit Ghosh is supported by the Ramanujan Fellowship (No. SB/S2/RJN-064/2015), India.\r\nThis work has been funded by the European Research Council under the European Union’s ERC Grant Agreement number 339025 GUDHI (Algorithmic Foundations of Geometric Understanding in Higher Dimensions). The third author is supported by Ramanujan Fellowship (No. SB/S2/RJN-064/2015), India. The fifth author also received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 754411.","publication_identifier":{"eissn":["1432-0444"],"issn":["0179-5376"]},"_id":"8248","author":[{"last_name":"Boissonnat","first_name":"Jean-Daniel","full_name":"Boissonnat, Jean-Daniel"},{"last_name":"Dyer","first_name":"Ramsay","full_name":"Dyer, Ramsay"},{"last_name":"Ghosh","first_name":"Arijit","full_name":"Ghosh, Arijit"},{"full_name":"Lieutier, Andre","last_name":"Lieutier","first_name":"Andre"},{"full_name":"Wintraecken, Mathijs","first_name":"Mathijs","orcid":"0000-0002-7472-2220","id":"307CFBC8-F248-11E8-B48F-1D18A9856A87","last_name":"Wintraecken"}],"quality_controlled":"1","scopus_import":"1","has_accepted_license":"1","citation":{"chicago":"Boissonnat, Jean-Daniel, Ramsay Dyer, Arijit Ghosh, Andre Lieutier, and Mathijs Wintraecken. “Local Conditions for Triangulating Submanifolds of Euclidean Space.” <i>Discrete and Computational Geometry</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s00454-020-00233-9\">https://doi.org/10.1007/s00454-020-00233-9</a>.","apa":"Boissonnat, J.-D., Dyer, R., Ghosh, A., Lieutier, A., &#38; Wintraecken, M. (2021). Local conditions for triangulating submanifolds of Euclidean space. <i>Discrete and Computational Geometry</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00454-020-00233-9\">https://doi.org/10.1007/s00454-020-00233-9</a>","short":"J.-D. Boissonnat, R. Dyer, A. Ghosh, A. Lieutier, M. Wintraecken, Discrete and Computational Geometry 66 (2021) 666–686.","ama":"Boissonnat J-D, Dyer R, Ghosh A, Lieutier A, Wintraecken M. Local conditions for triangulating submanifolds of Euclidean space. <i>Discrete and Computational Geometry</i>. 2021;66:666-686. doi:<a href=\"https://doi.org/10.1007/s00454-020-00233-9\">10.1007/s00454-020-00233-9</a>","mla":"Boissonnat, Jean-Daniel, et al. “Local Conditions for Triangulating Submanifolds of Euclidean Space.” <i>Discrete and Computational Geometry</i>, vol. 66, Springer Nature, 2021, pp. 666–86, doi:<a href=\"https://doi.org/10.1007/s00454-020-00233-9\">10.1007/s00454-020-00233-9</a>.","ieee":"J.-D. Boissonnat, R. Dyer, A. Ghosh, A. Lieutier, and M. Wintraecken, “Local conditions for triangulating submanifolds of Euclidean space,” <i>Discrete and Computational Geometry</i>, vol. 66. Springer Nature, pp. 666–686, 2021.","ista":"Boissonnat J-D, Dyer R, Ghosh A, Lieutier A, Wintraecken M. 2021. Local conditions for triangulating submanifolds of Euclidean space. Discrete and Computational Geometry. 66, 666–686."},"isi":1,"type":"journal_article","intvolume":"        66","publisher":"Springer Nature","date_published":"2021-09-01T00:00:00Z","status":"public","ddc":["510"],"abstract":[{"lang":"eng","text":"We consider the following setting: suppose that we are given a manifold M in Rd with positive reach. Moreover assume that we have an embedded simplical complex A without boundary, whose vertex set lies on the manifold, is sufficiently dense and such that all simplices in A have sufficient quality. We prove that if, locally, interiors of the projection of the simplices onto the tangent space do not intersect, then A is a triangulation of the manifold, that is, they are homeomorphic."}],"publication_status":"published","user_id":"3E5EF7F0-F248-11E8-B48F-1D18A9856A87","doi":"10.1007/s00454-020-00233-9","month":"09","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"main_file_link":[{"url":"https://doi.org/10.1007/s00454-020-00233-9","open_access":"1"}],"language":[{"iso":"eng"}],"ec_funded":1,"oa":1,"date_updated":"2025-04-14T07:44:05Z","oa_version":"Published Version","corr_author":"1","day":"01"}]