[{"abstract":[{"lang":"eng","text":"A graph game is a two-player zero-sum game in which the players move a token throughout a graph to produce an infinite path, which determines the winner or payoff of the game. In bidding games, both players have budgets, and in each turn, we hold an \"auction\" (bidding) to determine which player moves the token. In this survey, we consider several bidding mechanisms and study their effect on the properties of the game. Specifically, bidding games, and in particular bidding games of infinite duration, have an intriguing equivalence with random-turn games in which in each turn, the player who moves is chosen randomly. We show how minor changes in the bidding mechanism lead to unexpected differences in the equivalence with random-turn games."}],"conference":{"name":"CONCUR: Conference on Concurrency Theory","end_date":"2020-09-04","start_date":"2020-09-01","location":"Virtual"},"day":"06","date_published":"2020-08-06T00:00:00Z","author":[{"id":"463C8BC2-F248-11E8-B48F-1D18A9856A87","last_name":"Avni","full_name":"Avni, Guy","first_name":"Guy","orcid":"0000-0001-5588-8287"},{"orcid":"0000-0002-2985-7724","first_name":"Thomas A","full_name":"Henzinger, Thomas A","last_name":"Henzinger","id":"40876CD8-F248-11E8-B48F-1D18A9856A87"}],"oa":1,"acknowledgement":"We would like to thank all our collaborators Milad Aghajohari, Ventsislav Chonev, Rasmus Ibsen-Jensen, Ismäel Jecker, Petr Novotný, Josef Tkadlec, and Ðorđe Žikelić; we hope the collaboration was as fun and meaningful for you as it was for us.","doi":"10.4230/LIPIcs.CONCUR.2020.2","title":"A survey of bidding games on graphs","has_accepted_license":"1","date_created":"2020-10-04T22:01:36Z","year":"2020","intvolume":"       171","publication_identifier":{"issn":["1868-8969"],"isbn":["9783959771603"]},"ddc":["000"],"file_date_updated":"2020-10-05T14:13:19Z","citation":{"ama":"Avni G, Henzinger TA. A survey of bidding games on graphs. In: <i>31st International Conference on Concurrency Theory</i>. Vol 171. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2020. doi:<a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2020.2\">10.4230/LIPIcs.CONCUR.2020.2</a>","mla":"Avni, Guy, and Thomas A. Henzinger. “A Survey of Bidding Games on Graphs.” <i>31st International Conference on Concurrency Theory</i>, vol. 171, 2, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020, doi:<a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2020.2\">10.4230/LIPIcs.CONCUR.2020.2</a>.","short":"G. Avni, T.A. Henzinger, in:, 31st International Conference on Concurrency Theory, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020.","apa":"Avni, G., &#38; Henzinger, T. A. (2020). A survey of bidding games on graphs. In <i>31st International Conference on Concurrency Theory</i> (Vol. 171). Virtual: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2020.2\">https://doi.org/10.4230/LIPIcs.CONCUR.2020.2</a>","chicago":"Avni, Guy, and Thomas A Henzinger. “A Survey of Bidding Games on Graphs.” In <i>31st International Conference on Concurrency Theory</i>, Vol. 171. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020. <a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2020.2\">https://doi.org/10.4230/LIPIcs.CONCUR.2020.2</a>.","ista":"Avni G, Henzinger TA. 2020. A survey of bidding games on graphs. 31st International Conference on Concurrency Theory. CONCUR: Conference on Concurrency Theory, LIPIcs, vol. 171, 2.","ieee":"G. Avni and T. A. Henzinger, “A survey of bidding games on graphs,” in <i>31st International Conference on Concurrency Theory</i>, Virtual, 2020, vol. 171."},"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","article_processing_charge":"No","file":[{"date_created":"2020-10-05T14:13:19Z","success":1,"file_name":"2020_LIPIcsCONCUR_Avni.pdf","creator":"dernst","content_type":"application/pdf","date_updated":"2020-10-05T14:13:19Z","file_size":868510,"relation":"main_file","access_level":"open_access","checksum":"8f33b098e73724e0ac817f764d8e1a2d","file_id":"8611"}],"publication":"31st International Conference on Concurrency Theory","project":[{"_id":"25F42A32-B435-11E9-9278-68D0E5697425","name":"Formal methods for the design and analysis of complex systems","call_identifier":"FWF","grant_number":"Z211"}],"language":[{"iso":"eng"}],"type":"conference","department":[{"_id":"ToHe"}],"alternative_title":["LIPIcs"],"scopus_import":"1","corr_author":"1","date_updated":"2025-07-10T11:57:09Z","status":"public","tmp":{"image":"/images/cc_by.png","short":"CC BY (3.0)","name":"Creative Commons Attribution 3.0 Unported (CC BY 3.0)","legal_code_url":"https://creativecommons.org/licenses/by/3.0/legalcode"},"volume":171,"month":"08","publication_status":"published","_id":"8599","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","license":"https://creativecommons.org/licenses/by/3.0/","article_number":"2","quality_controlled":"1"},{"tmp":{"image":"/images/cc_by.png","short":"CC BY (3.0)","name":"Creative Commons Attribution 3.0 Unported (CC BY 3.0)","legal_code_url":"https://creativecommons.org/licenses/by/3.0/legalcode"},"status":"public","date_updated":"2025-07-10T11:57:10Z","publication_status":"published","volume":171,"month":"08","_id":"8600","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","article_number":"23","quality_controlled":"1","project":[{"grant_number":"S 11407_N23","call_identifier":"FWF","_id":"25832EC2-B435-11E9-9278-68D0E5697425","name":"Rigorous Systems Engineering"},{"name":"Rigorous Systems Engineering","_id":"25F2ACDE-B435-11E9-9278-68D0E5697425","grant_number":"S11402-N23","call_identifier":"FWF"},{"name":"Formal methods for the design and analysis of complex systems","_id":"25F42A32-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"Z211"}],"publication":"31st International Conference on Concurrency Theory","language":[{"iso":"eng"}],"department":[{"_id":"KrCh"},{"_id":"ToHe"}],"type":"conference","scopus_import":"1","corr_author":"1","alternative_title":["LIPIcs"],"has_accepted_license":"1","title":"Multi-dimensional long-run average problems for vector addition systems with states","external_id":{"arxiv":["2007.08917"]},"publication_identifier":{"isbn":["9783959771603"],"issn":["1868-8969"]},"year":"2020","date_created":"2020-10-04T22:01:36Z","intvolume":"       171","file_date_updated":"2020-10-05T14:04:25Z","ddc":["000"],"article_processing_charge":"No","file":[{"file_size":601231,"date_updated":"2020-10-05T14:04:25Z","content_type":"application/pdf","success":1,"file_name":"2020_LIPIcsCONCUR_Chatterjee.pdf","creator":"dernst","date_created":"2020-10-05T14:04:25Z","file_id":"8610","access_level":"open_access","checksum":"5039752f644c4b72b9361d21a5e31baf","relation":"main_file"}],"publisher":"Schloss Dagstuhl - Leibniz-Zentrum für Informatik","citation":{"chicago":"Chatterjee, Krishnendu, Thomas A Henzinger, and Jan Otop. “Multi-Dimensional Long-Run Average Problems for Vector Addition Systems with States.” In <i>31st International Conference on Concurrency Theory</i>, Vol. 171. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020. <a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2020.23\">https://doi.org/10.4230/LIPIcs.CONCUR.2020.23</a>.","apa":"Chatterjee, K., Henzinger, T. A., &#38; Otop, J. (2020). Multi-dimensional long-run average problems for vector addition systems with states. In <i>31st International Conference on Concurrency Theory</i> (Vol. 171). Virtual: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. <a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2020.23\">https://doi.org/10.4230/LIPIcs.CONCUR.2020.23</a>","ieee":"K. Chatterjee, T. A. Henzinger, and J. Otop, “Multi-dimensional long-run average problems for vector addition systems with states,” in <i>31st International Conference on Concurrency Theory</i>, Virtual, 2020, vol. 171.","ista":"Chatterjee K, Henzinger TA, Otop J. 2020. Multi-dimensional long-run average problems for vector addition systems with states. 31st International Conference on Concurrency Theory. CONCUR: Conference on Concurrency Theory, LIPIcs, vol. 171, 23.","mla":"Chatterjee, Krishnendu, et al. “Multi-Dimensional Long-Run Average Problems for Vector Addition Systems with States.” <i>31st International Conference on Concurrency Theory</i>, vol. 171, 23, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020, doi:<a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2020.23\">10.4230/LIPIcs.CONCUR.2020.23</a>.","ama":"Chatterjee K, Henzinger TA, Otop J. Multi-dimensional long-run average problems for vector addition systems with states. In: <i>31st International Conference on Concurrency Theory</i>. Vol 171. Schloss Dagstuhl - Leibniz-Zentrum für Informatik; 2020. doi:<a href=\"https://doi.org/10.4230/LIPIcs.CONCUR.2020.23\">10.4230/LIPIcs.CONCUR.2020.23</a>","short":"K. Chatterjee, T.A. Henzinger, J. Otop, in:, 31st International Conference on Concurrency Theory, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2020."},"day":"06","conference":{"start_date":"2020-09-01","location":"Virtual","end_date":"2020-09-04","name":"CONCUR: Conference on Concurrency Theory"},"abstract":[{"lang":"eng","text":"A vector addition system with states (VASS) consists of a finite set of states and counters. A transition changes the current state to the next state, and every counter is either incremented, or decremented, or left unchanged. A state and value for each counter is a configuration; and a computation is an infinite sequence of configurations with transitions between successive configurations. A probabilistic VASS consists of a VASS along with a probability distribution over the transitions for each state. Qualitative properties such as state and configuration reachability have been widely studied for VASS. In this work we consider multi-dimensional long-run average objectives for VASS and probabilistic VASS. For a counter, the cost of a configuration is the value of the counter; and the long-run average value of a computation for the counter is the long-run average of the costs of the configurations in the computation. The multi-dimensional long-run average problem given a VASS and a threshold value for each counter, asks whether there is a computation such that for each counter the long-run average value for the counter does not exceed the respective threshold. For probabilistic VASS, instead of the existence of a computation, we consider whether the expected long-run average value for each counter does not exceed the respective threshold. Our main results are as follows: we show that the multi-dimensional long-run average problem (a) is NP-complete for integer-valued VASS; (b) is undecidable for natural-valued VASS (i.e., nonnegative counters); and (c) can be solved in polynomial time for probabilistic integer-valued VASS, and probabilistic natural-valued VASS when all computations are non-terminating."}],"author":[{"last_name":"Chatterjee","id":"2E5DCA20-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-4561-241X","first_name":"Krishnendu","full_name":"Chatterjee, Krishnendu"},{"id":"40876CD8-F248-11E8-B48F-1D18A9856A87","last_name":"Henzinger","first_name":"Thomas A","full_name":"Henzinger, Thomas A","orcid":"0000-0002-2985-7724"},{"last_name":"Otop","id":"2FC5DA74-F248-11E8-B48F-1D18A9856A87","full_name":"Otop, Jan","first_name":"Jan"}],"arxiv":1,"oa":1,"date_published":"2020-08-06T00:00:00Z","doi":"10.4230/LIPIcs.CONCUR.2020.23"},{"doi":"10.1105/tpc.20.00384","issue":"11","article_type":"original","oa":1,"author":[{"first_name":"D","full_name":"Liu, D","last_name":"Liu"},{"last_name":"Kumar","first_name":"R","full_name":"Kumar, R"},{"full_name":"LAN, Claus","first_name":"Claus","last_name":"LAN"},{"last_name":"Johnson","id":"46A62C3A-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2739-8843","full_name":"Johnson, Alexander J","first_name":"Alexander J"},{"first_name":"W","full_name":"Siao, W","last_name":"Siao"},{"full_name":"Vanhoutte, I","first_name":"I","last_name":"Vanhoutte"},{"last_name":"Wang","full_name":"Wang, P","first_name":"P"},{"full_name":"Bender, KW","first_name":"KW","last_name":"Bender"},{"full_name":"Yperman, K","first_name":"K","last_name":"Yperman"},{"full_name":"Martins, S","first_name":"S","last_name":"Martins"},{"last_name":"Zhao","full_name":"Zhao, X","first_name":"X"},{"last_name":"Vert","full_name":"Vert, G","first_name":"G"},{"full_name":"Van Damme, D","first_name":"D","last_name":"Van Damme"},{"orcid":"0000-0002-8302-7596","full_name":"Friml, Jiří","first_name":"Jiří","last_name":"Friml","id":"4159519E-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Russinova","first_name":"E","full_name":"Russinova, E"}],"date_published":"2020-11-01T00:00:00Z","day":"01","abstract":[{"text":"Clathrin-mediated endocytosis (CME) and its core endocytic machinery are evolutionarily conserved across all eukaryotes. In mammals, the heterotetrameric adaptor protein complex-2 (AP-2) sorts plasma membrane (PM) cargoes into vesicles through the recognition of motifs based on tyrosine or di-leucine in their cytoplasmic tails. However, in plants, very little is known on how PM proteins are sorted for CME and whether similar motifs are required. In Arabidopsis thaliana, the brassinosteroid (BR) receptor, BR INSENSITIVE1 (BRI1), undergoes endocytosis that depends on clathrin and AP-2. Here we demonstrate that BRI1 binds directly to the medium AP-2 subunit, AP2M. The cytoplasmic domain of BRI1 contains five putative canonical surface-exposed tyrosine-based endocytic motifs. The tyrosine-to-phenylalanine substitution in Y898KAI reduced BRI1 internalization without affecting its kinase activity. Consistently, plants carrying the BRI1Y898F mutation were hypersensitive to BRs. Our study demonstrates that AP-2-dependent internalization of PM proteins via the recognition of functional tyrosine motifs also operates in plants.","lang":"eng"}],"publisher":"American Society of Plant Biologists","article_processing_charge":"No","citation":{"apa":"Liu, D., Kumar, R., LAN, C., Johnson, A. J., Siao, W., Vanhoutte, I., … Russinova, E. (2020). Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly driven by a canonical tyrosine-based Motif. <i>Plant Cell</i>. American Society of Plant Biologists. <a href=\"https://doi.org/10.1105/tpc.20.00384\">https://doi.org/10.1105/tpc.20.00384</a>","chicago":"Liu, D, R Kumar, Claus LAN, Alexander J Johnson, W Siao, I Vanhoutte, P Wang, et al. “Endocytosis of BRASSINOSTEROID INSENSITIVE1 Is Partly Driven by a Canonical Tyrosine-Based Motif.” <i>Plant Cell</i>. American Society of Plant Biologists, 2020. <a href=\"https://doi.org/10.1105/tpc.20.00384\">https://doi.org/10.1105/tpc.20.00384</a>.","ieee":"D. Liu <i>et al.</i>, “Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly driven by a canonical tyrosine-based Motif,” <i>Plant Cell</i>, vol. 32, no. 11. American Society of Plant Biologists, pp. 3598–3612, 2020.","ista":"Liu D, Kumar R, LAN C, Johnson AJ, Siao W, Vanhoutte I, Wang P, Bender K, Yperman K, Martins S, Zhao X, Vert G, Van Damme D, Friml J, Russinova E. 2020. Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly driven by a canonical tyrosine-based Motif. Plant Cell. 32(11), 3598–3612.","mla":"Liu, D., et al. “Endocytosis of BRASSINOSTEROID INSENSITIVE1 Is Partly Driven by a Canonical Tyrosine-Based Motif.” <i>Plant Cell</i>, vol. 32, no. 11, American Society of Plant Biologists, 2020, pp. 3598–612, doi:<a href=\"https://doi.org/10.1105/tpc.20.00384\">10.1105/tpc.20.00384</a>.","ama":"Liu D, Kumar R, LAN C, et al. Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly driven by a canonical tyrosine-based Motif. <i>Plant Cell</i>. 2020;32(11):3598-3612. doi:<a href=\"https://doi.org/10.1105/tpc.20.00384\">10.1105/tpc.20.00384</a>","short":"D. Liu, R. Kumar, C. LAN, A.J. Johnson, W. Siao, I. Vanhoutte, P. Wang, K. Bender, K. Yperman, S. Martins, X. Zhao, G. Vert, D. Van Damme, J. Friml, E. Russinova, Plant Cell 32 (2020) 3598–3612."},"ddc":["580"],"publication_identifier":{"issn":["1040-4651"],"eissn":["1532-298x"]},"external_id":{"pmid":["32958564"],"isi":["000600226800021"]},"intvolume":"        32","date_created":"2020-10-05T12:45:16Z","year":"2020","title":"Endocytosis of BRASSINOSTEROID INSENSITIVE1 is partly driven by a canonical tyrosine-based Motif","pmid":1,"scopus_import":"1","ec_funded":1,"department":[{"_id":"JiFr"}],"type":"journal_article","language":[{"iso":"eng"}],"project":[{"name":"Molecular mechanisms of endocytic cargo recognition in plants","_id":"26538374-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"I03630"},{"grant_number":"742985","call_identifier":"H2020","name":"Tracing Evolution of Auxin Transport and Polarity in Plants","_id":"261099A6-B435-11E9-9278-68D0E5697425"}],"publication":"Plant Cell","quality_controlled":"1","page":"3598-3612","_id":"8607","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","volume":32,"publication_status":"published","month":"11","isi":1,"main_file_link":[{"url":"https://europepmc.org/article/MED/32958564","open_access":"1"}],"status":"public","date_updated":"2026-06-18T19:35:07Z"},{"has_accepted_license":"1","title":"Monitorability under assumptions","publication_identifier":{"eisbn":["9783030605087"],"issn":["0302-9743"],"eissn":["1611-3349"],"isbn":["9783030605070"]},"external_id":{"isi":["000728160600001"]},"intvolume":"     12399","year":"2020","date_created":"2020-10-07T15:05:37Z","ddc":["000"],"file_date_updated":"2020-10-15T14:28:06Z","publisher":"Springer Nature","article_processing_charge":"No","file":[{"date_created":"2020-10-15T14:28:06Z","date_updated":"2020-10-15T14:28:06Z","file_size":478148,"content_type":"application/pdf","success":1,"file_name":"monitorability.pdf","creator":"esarac","access_level":"open_access","checksum":"00661f9b7034f52e18bf24fa552b8194","relation":"main_file","file_id":"8665"}],"citation":{"mla":"Henzinger, Thomas A., and Naci E. Sarac. “Monitorability under Assumptions.” <i>Runtime Verification</i>, vol. 12399, Springer Nature, 2020, pp. 3–18, doi:<a href=\"https://doi.org/10.1007/978-3-030-60508-7_1\">10.1007/978-3-030-60508-7_1</a>.","ama":"Henzinger TA, Sarac NE. Monitorability under assumptions. In: <i>Runtime Verification</i>. Vol 12399. Springer Nature; 2020:3-18. doi:<a href=\"https://doi.org/10.1007/978-3-030-60508-7_1\">10.1007/978-3-030-60508-7_1</a>","short":"T.A. Henzinger, N.E. Sarac, in:, Runtime Verification, Springer Nature, 2020, pp. 3–18.","chicago":"Henzinger, Thomas A, and Naci E Sarac. “Monitorability under Assumptions.” In <i>Runtime Verification</i>, 12399:3–18. Springer Nature, 2020. <a href=\"https://doi.org/10.1007/978-3-030-60508-7_1\">https://doi.org/10.1007/978-3-030-60508-7_1</a>.","apa":"Henzinger, T. A., &#38; Sarac, N. E. (2020). Monitorability under assumptions. In <i>Runtime Verification</i> (Vol. 12399, pp. 3–18). Los Angeles, CA, United States: Springer Nature. <a href=\"https://doi.org/10.1007/978-3-030-60508-7_1\">https://doi.org/10.1007/978-3-030-60508-7_1</a>","ista":"Henzinger TA, Sarac NE. 2020. Monitorability under assumptions. Runtime Verification. RV: Runtime Verification, LNCS, vol. 12399, 3–18.","ieee":"T. A. Henzinger and N. E. Sarac, “Monitorability under assumptions,” in <i>Runtime Verification</i>, Los Angeles, CA, United States, 2020, vol. 12399, pp. 3–18."},"day":"02","conference":{"start_date":"2020-10-06","location":"Los Angeles, CA, United States","end_date":"2020-10-09","name":"RV: Runtime Verification"},"abstract":[{"text":"We introduce the monitoring of trace properties under assumptions. An assumption limits the space of possible traces that the monitor may encounter. An assumption may result from knowledge about the system that is being monitored, about the environment, or about another, connected monitor. We define monitorability under assumptions and study its theoretical properties. In particular, we show that for every assumption A, the boolean combinations of properties that are safe or co-safe relative to A are monitorable under A. We give several examples and constructions on how an assumption can make a non-monitorable property monitorable, and how an assumption can make a monitorable property monitorable with fewer resources, such as integer registers.","lang":"eng"}],"oa":1,"author":[{"last_name":"Henzinger","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-2985-7724","full_name":"Henzinger, Thomas A","first_name":"Thomas A"},{"last_name":"Sarac","id":"8C6B42F8-C8E6-11E9-A03A-F2DCE5697425","first_name":"Naci E","full_name":"Sarac, Naci E"}],"date_published":"2020-10-02T00:00:00Z","acknowledgement":"This research was supported in part by the Austrian Science Fund (FWF) under grant Z211-N23 (Wittgenstein Award).","doi":"10.1007/978-3-030-60508-7_1","date_updated":"2026-04-16T10:22:01Z","status":"public","month":"10","volume":12399,"publication_status":"published","isi":1,"user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","_id":"8623","oa_version":"Submitted Version","page":"3-18","quality_controlled":"1","project":[{"grant_number":"Z211","call_identifier":"FWF","name":"Formal methods for the design and analysis of complex systems","_id":"25F42A32-B435-11E9-9278-68D0E5697425"}],"publication":"Runtime Verification","language":[{"iso":"eng"}],"department":[{"_id":"ToHe"}],"type":"conference","scopus_import":"1","alternative_title":["LNCS"]},{"scopus_import":"1","ec_funded":1,"department":[{"_id":"BjHo"}],"type":"journal_article","language":[{"iso":"eng"}],"project":[{"call_identifier":"FP7","grant_number":"291734","name":"International IST Postdoc Fellowship Programme","_id":"25681D80-B435-11E9-9278-68D0E5697425"}],"publication":"Physical Review Letters","keyword":["General Physics and Astronomy"],"quality_controlled":"1","article_number":"064501","_id":"8634","oa_version":"Preprint","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","month":"08","volume":125,"publication_status":"published","isi":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/2008.02367"}],"date_updated":"2025-04-15T06:50:02Z","status":"public","doi":"10.1103/physrevlett.125.064501","issue":"6","acknowledgement":"M. F. S. and R. O. G. acknowledge funding from the National Science Foundation (CMMI-1234436, DMS1125302, CMMI-1725587) and Defense Advanced Research Projects Agency (HR0011-16-2-0033). B. S.has received funding from the People Programme (Marie Curie Actions) of the European Union's Seventh Framework Programme FP7/2007–2013/ under REA Grant Agreement No. 291734.","article_type":"original","oa":1,"arxiv":1,"author":[{"last_name":"Suri","id":"47A5E706-F248-11E8-B48F-1D18A9856A87","first_name":"Balachandra","full_name":"Suri, Balachandra"},{"full_name":"Kageorge, Logan","first_name":"Logan","last_name":"Kageorge"},{"first_name":"Roman O.","full_name":"Grigoriev, Roman O.","last_name":"Grigoriev"},{"full_name":"Schatz, Michael F.","first_name":"Michael F.","last_name":"Schatz"}],"date_published":"2020-08-05T00:00:00Z","day":"05","abstract":[{"lang":"eng","text":"In laboratory studies and numerical simulations, we observe clear signatures of unstable time-periodic solutions in a moderately turbulent quasi-two-dimensional flow. We validate the dynamical relevance of such solutions by demonstrating that turbulent flows in both experiment and numerics transiently display time-periodic dynamics when they shadow unstable periodic orbits (UPOs). We show that UPOs we computed are also statistically significant, with turbulent flows spending a sizable fraction of the total time near these solutions. As a result, the average rates of energy input and dissipation for the turbulent flow and frequently visited UPOs differ only by a few percent."}],"article_processing_charge":"No","publisher":"American Physical Society","citation":{"short":"B. Suri, L. Kageorge, R.O. Grigoriev, M.F. Schatz, Physical Review Letters 125 (2020).","mla":"Suri, Balachandra, et al. “Capturing Turbulent Dynamics and Statistics in Experiments with Unstable Periodic Orbits.” <i>Physical Review Letters</i>, vol. 125, no. 6, 064501, American Physical Society, 2020, doi:<a href=\"https://doi.org/10.1103/physrevlett.125.064501\">10.1103/physrevlett.125.064501</a>.","ama":"Suri B, Kageorge L, Grigoriev RO, Schatz MF. Capturing turbulent dynamics and statistics in experiments with unstable periodic orbits. <i>Physical Review Letters</i>. 2020;125(6). doi:<a href=\"https://doi.org/10.1103/physrevlett.125.064501\">10.1103/physrevlett.125.064501</a>","ieee":"B. Suri, L. Kageorge, R. O. Grigoriev, and M. F. Schatz, “Capturing turbulent dynamics and statistics in experiments with unstable periodic orbits,” <i>Physical Review Letters</i>, vol. 125, no. 6. American Physical Society, 2020.","ista":"Suri B, Kageorge L, Grigoriev RO, Schatz MF. 2020. Capturing turbulent dynamics and statistics in experiments with unstable periodic orbits. Physical Review Letters. 125(6), 064501.","chicago":"Suri, Balachandra, Logan Kageorge, Roman O. Grigoriev, and Michael F. Schatz. “Capturing Turbulent Dynamics and Statistics in Experiments with Unstable Periodic Orbits.” <i>Physical Review Letters</i>. American Physical Society, 2020. <a href=\"https://doi.org/10.1103/physrevlett.125.064501\">https://doi.org/10.1103/physrevlett.125.064501</a>.","apa":"Suri, B., Kageorge, L., Grigoriev, R. O., &#38; Schatz, M. F. (2020). Capturing turbulent dynamics and statistics in experiments with unstable periodic orbits. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevlett.125.064501\">https://doi.org/10.1103/physrevlett.125.064501</a>"},"publication_identifier":{"issn":["0031-9007"],"eissn":["1079-7114"]},"external_id":{"arxiv":["2008.02367"],"isi":["000555785600005"]},"intvolume":"       125","date_created":"2020-10-08T17:27:32Z","year":"2020","title":"Capturing turbulent dynamics and statistics in experiments with unstable periodic orbits"},{"day":"01","abstract":[{"text":"The parabigeminal nucleus (PBG) is the mammalian homologue to the isthmic complex of other vertebrates. Optogenetic stimulation of the PBG induces freezing and escape in mice, a result thought to be caused by a PBG projection to the central nucleus of the amygdala. However, the isthmic complex, including the PBG, has been classically considered satellite nuclei of the Superior Colliculus (SC), which upon stimulation of its medial part also triggers fear and avoidance reactions. As the PBG-SC connectivity is not well characterized, we investigated whether the topology of the PBG projection to the SC could be related to the behavioral consequences of PBG stimulation. To that end, we performed immunohistochemistry, in situ hybridization and neural tracer injections in the SC and PBG in a diurnal rodent, the Octodon degus. We found that all PBG neurons expressed both glutamatergic and cholinergic markers and were distributed in clearly defined anterior (aPBG) and posterior (pPBG) subdivisions. The pPBG is connected reciprocally and topographically to the ipsilateral SC, whereas the aPBG receives afferent axons from the ipsilateral SC and projected exclusively to the contralateral SC. This contralateral projection forms a dense field of terminals that is restricted to the medial SC, in correspondence with the SC representation of the aerial binocular field which, we also found, in O. degus prompted escape reactions upon looming stimulation. Therefore, this specialized topography allows binocular interactions in the SC region controlling responses to aerial predators, suggesting a link between the mechanisms by which the SC and PBG produce defensive behaviors.","lang":"eng"}],"oa":1,"author":[{"first_name":"Alfonso","full_name":"Deichler, Alfonso","last_name":"Deichler"},{"first_name":"Denisse","full_name":"Carrasco, Denisse","last_name":"Carrasco"},{"first_name":"Luciana","full_name":"Lopez-Jury, Luciana","last_name":"Lopez-Jury"},{"id":"2E7C4E78-F248-11E8-B48F-1D18A9856A87","last_name":"Vega Zuniga","first_name":"Tomas A","full_name":"Vega Zuniga, Tomas A"},{"last_name":"Marquez","full_name":"Marquez, Natalia","first_name":"Natalia"},{"last_name":"Mpodozis","full_name":"Mpodozis, Jorge","first_name":"Jorge"},{"last_name":"Marin","full_name":"Marin, Gonzalo","first_name":"Gonzalo"}],"date_published":"2020-10-01T00:00:00Z","acknowledgement":"We thank Elisa Sentis and Solano Henriquez for their expert technical assistance. Dr. David Sterratt for his helpful advice in using the Retistruct package. Dr. Joao Botelho for his valuable assistance in scanning the retinas. To Mrs. Diane Greenstein for kindly reading and correcting our manuscript. Macarena Ruiz for her helpful comments during figures elaboration. Dr. Alexia Nunez-Parra for kindly providing us with the transgenic mouse line. Dr. Harald Luksch for granting us access to the confocal microscope at his lab. This study was supported by: FONDECYT 1151432 (to G.M.), FONDECYT 1170027 (to J.M.) and Doctoral fellowship CONICYT 21161599 (to A.D.).","article_type":"original","doi":"10.1038/s41598-020-72848-0","has_accepted_license":"1","title":"A specialized reciprocal connectivity suggests a link between the mechanisms by which the superior colliculus and parabigeminal nucleus produce defensive behaviors in rodents","pmid":1,"publication_identifier":{"eissn":["2045-2322"]},"external_id":{"pmid":["33004866"],"isi":["000577142600032"]},"intvolume":"        10","date_created":"2020-10-11T22:01:14Z","year":"2020","file_date_updated":"2020-10-12T12:39:10Z","ddc":["570"],"article_processing_charge":"No","publisher":"Springer Nature","file":[{"date_updated":"2020-10-12T12:39:10Z","file_size":3906744,"content_type":"application/pdf","file_name":"2020_ScientificReport_Deichler.pdf","creator":"dernst","success":1,"date_created":"2020-10-12T12:39:10Z","file_id":"8651","checksum":"f6dd99954f1c0ffb4da5a1d2d739bf31","access_level":"open_access","relation":"main_file"}],"citation":{"mla":"Deichler, Alfonso, et al. “A Specialized Reciprocal Connectivity Suggests a Link between the Mechanisms by Which the Superior Colliculus and Parabigeminal Nucleus Produce Defensive Behaviors in Rodents.” <i>Scientific Reports</i>, vol. 10, 16220, Springer Nature, 2020, doi:<a href=\"https://doi.org/10.1038/s41598-020-72848-0\">10.1038/s41598-020-72848-0</a>.","ama":"Deichler A, Carrasco D, Lopez-Jury L, et al. A specialized reciprocal connectivity suggests a link between the mechanisms by which the superior colliculus and parabigeminal nucleus produce defensive behaviors in rodents. <i>Scientific Reports</i>. 2020;10. doi:<a href=\"https://doi.org/10.1038/s41598-020-72848-0\">10.1038/s41598-020-72848-0</a>","short":"A. Deichler, D. Carrasco, L. Lopez-Jury, T.A. Vega Zuniga, N. Marquez, J. Mpodozis, G. Marin, Scientific Reports 10 (2020).","chicago":"Deichler, Alfonso, Denisse Carrasco, Luciana Lopez-Jury, Tomas A Vega Zuniga, Natalia Marquez, Jorge Mpodozis, and Gonzalo Marin. “A Specialized Reciprocal Connectivity Suggests a Link between the Mechanisms by Which the Superior Colliculus and Parabigeminal Nucleus Produce Defensive Behaviors in Rodents.” <i>Scientific Reports</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1038/s41598-020-72848-0\">https://doi.org/10.1038/s41598-020-72848-0</a>.","apa":"Deichler, A., Carrasco, D., Lopez-Jury, L., Vega Zuniga, T. A., Marquez, N., Mpodozis, J., &#38; Marin, G. (2020). A specialized reciprocal connectivity suggests a link between the mechanisms by which the superior colliculus and parabigeminal nucleus produce defensive behaviors in rodents. <i>Scientific Reports</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41598-020-72848-0\">https://doi.org/10.1038/s41598-020-72848-0</a>","ieee":"A. Deichler <i>et al.</i>, “A specialized reciprocal connectivity suggests a link between the mechanisms by which the superior colliculus and parabigeminal nucleus produce defensive behaviors in rodents,” <i>Scientific Reports</i>, vol. 10. Springer Nature, 2020.","ista":"Deichler A, Carrasco D, Lopez-Jury L, Vega Zuniga TA, Marquez N, Mpodozis J, Marin G. 2020. A specialized reciprocal connectivity suggests a link between the mechanisms by which the superior colliculus and parabigeminal nucleus produce defensive behaviors in rodents. Scientific Reports. 10, 16220."},"publication":"Scientific Reports","language":[{"iso":"eng"}],"department":[{"_id":"MaJö"}],"type":"journal_article","scopus_import":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"date_updated":"2026-04-03T09:26:41Z","status":"public","volume":10,"month":"10","publication_status":"published","isi":1,"license":"https://creativecommons.org/licenses/by/4.0/","_id":"8643","oa_version":"Published Version","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","quality_controlled":"1","article_number":"16220"},{"day":"01","abstract":[{"text":"Determining the phase diagram of systems consisting of smaller subsystems 'connected' via a tunable coupling is a challenging task relevant for a variety of physical settings. A general question is whether new phases, not present in the uncoupled limit, may arise. We use machine learning and a suitable quasidistance between different points of the phase diagram to study layered spin models, in which the spin variables constituting each of the uncoupled systems (to which we refer as layers) are coupled to each other via an interlayer coupling. In such systems, in general, composite order parameters involving spins of different layers may emerge as a consequence of the interlayer coupling. We focus on the layered Ising and Ashkin–Teller models as a paradigmatic case study, determining their phase diagram via the application of a machine learning algorithm to the Monte Carlo data. Remarkably our technique is able to correctly characterize all the system phases also in the case of hidden order parameters, i.e. order parameters whose expression in terms of the microscopic configurations would require additional preprocessing of the data fed to the algorithm. We correctly retrieve the three known phases of the Ashkin–Teller model with ferromagnetic couplings, including the phase described by a composite order parameter. For the bilayer and trilayer Ising models the phases we find are only the ferromagnetic and the paramagnetic ones. Within the approach we introduce, owing to the construction of convolutional neural networks, naturally suitable for layered image-like data with arbitrary number of layers, no preprocessing of the Monte Carlo data is needed, also with regard to its spatial structure. The physical meaning of our results is discussed and compared with analytical data, where available. Yet, the method can be used without any a priori knowledge of the phases one seeks to find and can be applied to other models and structures.","lang":"eng"}],"author":[{"full_name":"Rzadkowski, Wojciech","first_name":"Wojciech","orcid":"0000-0002-1106-4419","id":"48C55298-F248-11E8-B48F-1D18A9856A87","last_name":"Rzadkowski"},{"first_name":"N","full_name":"Defenu, N","last_name":"Defenu"},{"full_name":"Chiacchiera, S","first_name":"S","last_name":"Chiacchiera"},{"last_name":"Trombettoni","first_name":"A","full_name":"Trombettoni, A"},{"orcid":"0000-0001-8823-9777","full_name":"Bighin, Giacomo","first_name":"Giacomo","last_name":"Bighin","id":"4CA96FD4-F248-11E8-B48F-1D18A9856A87"}],"oa":1,"date_published":"2020-09-01T00:00:00Z","acknowledgement":"We thank Gesualdo Delfino, Michele Fabrizio, Piero Ferrarese, Robert Konik, Christoph Lampert and Mikhail Lemeshko for stimulating discussions at various stages of this work. WR has received funding from the EU Horizon 2020 program under the Marie Skłodowska-Curie Grant Agreement No. 665385 and is a recipient of a DOC Fellowship of the Austrian Academy of Sciences. GB acknowledges support from the Austrian Science Fund (FWF), under project No. M2641-N27. ND acknowledges support by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) via Collaborative Research Center SFB 1225 (ISOQUANT)--project-id 273811115--and under Germany's Excellence Strategy 'EXC-2181/1-390900948' (the Heidelberg STRUCTURES Excellence Cluster).","issue":"9","article_type":"original","doi":"10.1088/1367-2630/abae44","has_accepted_license":"1","title":"Detecting composite orders in layered models via machine learning","external_id":{"isi":["000573298000001"]},"publication_identifier":{"issn":["1367-2630"]},"year":"2020","date_created":"2020-10-11T22:01:14Z","intvolume":"        22","ddc":["530"],"file_date_updated":"2020-10-12T12:18:47Z","publisher":"IOP Publishing","file":[{"file_id":"8650","relation":"main_file","access_level":"open_access","checksum":"c9238fff422e7a957c3a0d559f756b3a","file_size":2725143,"date_updated":"2020-10-12T12:18:47Z","file_name":"2020_NewJournalPhysics_Rzdkowski.pdf","success":1,"creator":"dernst","content_type":"application/pdf","date_created":"2020-10-12T12:18:47Z"}],"article_processing_charge":"No","citation":{"ieee":"W. Rzadkowski, N. Defenu, S. Chiacchiera, A. Trombettoni, and G. Bighin, “Detecting composite orders in layered models via machine learning,” <i>New Journal of Physics</i>, vol. 22, no. 9. IOP Publishing, 2020.","ista":"Rzadkowski W, Defenu N, Chiacchiera S, Trombettoni A, Bighin G. 2020. Detecting composite orders in layered models via machine learning. New Journal of Physics. 22(9), 093026.","apa":"Rzadkowski, W., Defenu, N., Chiacchiera, S., Trombettoni, A., &#38; Bighin, G. (2020). Detecting composite orders in layered models via machine learning. <i>New Journal of Physics</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1367-2630/abae44\">https://doi.org/10.1088/1367-2630/abae44</a>","chicago":"Rzadkowski, Wojciech, N Defenu, S Chiacchiera, A Trombettoni, and Giacomo Bighin. “Detecting Composite Orders in Layered Models via Machine Learning.” <i>New Journal of Physics</i>. IOP Publishing, 2020. <a href=\"https://doi.org/10.1088/1367-2630/abae44\">https://doi.org/10.1088/1367-2630/abae44</a>.","short":"W. Rzadkowski, N. Defenu, S. Chiacchiera, A. Trombettoni, G. Bighin, New Journal of Physics 22 (2020).","ama":"Rzadkowski W, Defenu N, Chiacchiera S, Trombettoni A, Bighin G. Detecting composite orders in layered models via machine learning. <i>New Journal of Physics</i>. 2020;22(9). doi:<a href=\"https://doi.org/10.1088/1367-2630/abae44\">10.1088/1367-2630/abae44</a>","mla":"Rzadkowski, Wojciech, et al. “Detecting Composite Orders in Layered Models via Machine Learning.” <i>New Journal of Physics</i>, vol. 22, no. 9, 093026, IOP Publishing, 2020, doi:<a href=\"https://doi.org/10.1088/1367-2630/abae44\">10.1088/1367-2630/abae44</a>."},"project":[{"name":"International IST Doctoral Program","_id":"2564DBCA-B435-11E9-9278-68D0E5697425","grant_number":"665385","call_identifier":"H2020"},{"name":"Analytic and machine learning approaches to composite quantum impurities","_id":"05A235A0-7A3F-11EA-A408-12923DDC885E","grant_number":"25681"},{"call_identifier":"FWF","grant_number":"M02641","name":"A path-integral approach to composite impurities","_id":"26986C82-B435-11E9-9278-68D0E5697425"}],"publication":"New Journal of Physics","language":[{"iso":"eng"}],"department":[{"_id":"MiLe"}],"type":"journal_article","corr_author":"1","scopus_import":"1","ec_funded":1,"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"status":"public","date_updated":"2026-04-07T14:20:12Z","isi":1,"publication_status":"published","month":"09","volume":22,"_id":"8644","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","related_material":{"record":[{"relation":"dissertation_contains","status":"public","id":"10759"}]},"article_number":"093026","quality_controlled":"1"},{"doi":"10.1093/bioinformatics/btz841","article_type":"original","acknowledgement":"This work was supported by the European Research Council under the European Union’s Seventh Framework Programme (FP7/2007-2013, ERC grant agreement 335980_EinME) and Startup package to the Ivankov laboratory at Skolkovo Institute of Science and Technology. The work was started at the School of Molecular and Theoretical Biology 2017 supported by the Zimin Foundation. N.S.B. was supported by the Woman Scientists Support Grant in Centre for Genomic Regulation (CRG). ","issue":"6","date_published":"2020-03-15T00:00:00Z","author":[{"full_name":"Esteban, Laura A","first_name":"Laura A","last_name":"Esteban"},{"last_name":"Lonishin","full_name":"Lonishin, Lyubov R","first_name":"Lyubov R"},{"last_name":"Bobrovskiy","first_name":"Daniil M","full_name":"Bobrovskiy, Daniil M"},{"full_name":"Leleytner, Gregory","first_name":"Gregory","last_name":"Leleytner"},{"first_name":"Natalya S","full_name":"Bogatyreva, Natalya S","last_name":"Bogatyreva"},{"first_name":"Fyodor","full_name":"Kondrashov, Fyodor","orcid":"0000-0001-8243-4694","id":"44FDEF62-F248-11E8-B48F-1D18A9856A87","last_name":"Kondrashov"},{"last_name":"Ivankov","first_name":"Dmitry N ","full_name":"Ivankov, Dmitry N "}],"oa":1,"abstract":[{"text":"Epistasis, the context-dependence of the contribution of an amino acid substitution to fitness, is common in evolution. To detect epistasis, fitness must be measured for at least four genotypes: the reference genotype, two different single mutants and a double mutant with both of the single mutations. For higher-order epistasis of the order n, fitness has to be measured for all 2n genotypes of an n-dimensional hypercube in genotype space forming a ‘combinatorially complete dataset’. So far, only a handful of such datasets have been produced by manual curation. Concurrently, random mutagenesis experiments have produced measurements of fitness and other phenotypes in a high-throughput manner, potentially containing a number of combinatorially complete datasets. We present an effective recursive algorithm for finding all hypercube structures in random mutagenesis experimental data. To test the algorithm, we applied it to the data from a recent HIS3 protein dataset and found all 199 847 053 unique combinatorially complete genotype combinations of dimensionality ranging from 2 to 12. The algorithm may be useful for researchers looking for higher-order epistasis in their high-throughput experimental data.","lang":"eng"}],"day":"15","citation":{"ieee":"L. A. Esteban <i>et al.</i>, “HypercubeME: Two hundred million combinatorially complete datasets from a single experiment,” <i>Bioinformatics</i>, vol. 36, no. 6. Oxford University Press, pp. 1960–1962, 2020.","ista":"Esteban LA, Lonishin LR, Bobrovskiy DM, Leleytner G, Bogatyreva NS, Kondrashov F, Ivankov DN. 2020. HypercubeME: Two hundred million combinatorially complete datasets from a single experiment. Bioinformatics. 36(6), 1960–1962.","apa":"Esteban, L. A., Lonishin, L. R., Bobrovskiy, D. M., Leleytner, G., Bogatyreva, N. S., Kondrashov, F., &#38; Ivankov, D. N. (2020). HypercubeME: Two hundred million combinatorially complete datasets from a single experiment. <i>Bioinformatics</i>. Oxford University Press. <a href=\"https://doi.org/10.1093/bioinformatics/btz841\">https://doi.org/10.1093/bioinformatics/btz841</a>","chicago":"Esteban, Laura A, Lyubov R Lonishin, Daniil M Bobrovskiy, Gregory Leleytner, Natalya S Bogatyreva, Fyodor Kondrashov, and Dmitry N  Ivankov. “HypercubeME: Two Hundred Million Combinatorially Complete Datasets from a Single Experiment.” <i>Bioinformatics</i>. Oxford University Press, 2020. <a href=\"https://doi.org/10.1093/bioinformatics/btz841\">https://doi.org/10.1093/bioinformatics/btz841</a>.","short":"L.A. Esteban, L.R. Lonishin, D.M. Bobrovskiy, G. Leleytner, N.S. Bogatyreva, F. Kondrashov, D.N. Ivankov, Bioinformatics 36 (2020) 1960–1962.","ama":"Esteban LA, Lonishin LR, Bobrovskiy DM, et al. HypercubeME: Two hundred million combinatorially complete datasets from a single experiment. <i>Bioinformatics</i>. 2020;36(6):1960-1962. doi:<a href=\"https://doi.org/10.1093/bioinformatics/btz841\">10.1093/bioinformatics/btz841</a>","mla":"Esteban, Laura A., et al. “HypercubeME: Two Hundred Million Combinatorially Complete Datasets from a Single Experiment.” <i>Bioinformatics</i>, vol. 36, no. 6, Oxford University Press, 2020, pp. 1960–62, doi:<a href=\"https://doi.org/10.1093/bioinformatics/btz841\">10.1093/bioinformatics/btz841</a>."},"article_processing_charge":"No","publisher":"Oxford University Press","file":[{"date_created":"2020-10-12T12:02:09Z","file_size":308341,"date_updated":"2020-10-12T12:02:09Z","success":1,"file_name":"2020_Bioinformatics_Esteban.pdf","creator":"dernst","content_type":"application/pdf","relation":"main_file","checksum":"21d6f71839deb3b83e4a356193f72767","access_level":"open_access","file_id":"8649"}],"file_date_updated":"2020-10-12T12:02:09Z","ddc":["000","570"],"year":"2020","date_created":"2020-10-11T22:01:14Z","intvolume":"        36","external_id":{"isi":["000538696800054"],"pmid":["31742320"]},"publication_identifier":{"eissn":["1460-2059"],"issn":["1367-4803"]},"pmid":1,"title":"HypercubeME: Two hundred million combinatorially complete datasets from a single experiment","has_accepted_license":"1","ec_funded":1,"scopus_import":"1","type":"journal_article","department":[{"_id":"FyKo"}],"language":[{"iso":"eng"}],"publication":"Bioinformatics","project":[{"call_identifier":"FP7","grant_number":"335980","_id":"26120F5C-B435-11E9-9278-68D0E5697425","name":"Systematic investigation of epistasis in molecular evolution"}],"quality_controlled":"1","oa_version":"Published Version","_id":"8645","page":"1960-1962","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","license":"https://creativecommons.org/licenses/by-nc/4.0/","isi":1,"volume":36,"publication_status":"published","month":"03","date_updated":"2025-05-14T11:04:01Z","status":"public","tmp":{"name":"Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)","image":"/images/cc_by_nc.png","short":"CC BY-NC (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc/4.0/legalcode"}},{"language":[{"iso":"eng"}],"publication":"Communications Physics","project":[{"call_identifier":"H2020","grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships"},{"call_identifier":"FWF","grant_number":"P29902","_id":"26031614-B435-11E9-9278-68D0E5697425","name":"Quantum rotations in the presence of a many-body environment"},{"_id":"2688CF98-B435-11E9-9278-68D0E5697425","name":"Angulon: physics and applications of a new quasiparticle","call_identifier":"H2020","grant_number":"801770"}],"ec_funded":1,"corr_author":"1","scopus_import":"1","type":"journal_article","department":[{"_id":"MiLe"}],"month":"10","volume":3,"publication_status":"published","isi":1,"status":"public","date_updated":"2025-04-14T07:43:50Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"quality_controlled":"1","article_number":"178","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","_id":"8652","oa_version":"Published Version","date_published":"2020-10-09T00:00:00Z","oa":1,"author":[{"id":"4AF46FD6-F248-11E8-B48F-1D18A9856A87","last_name":"Ghazaryan","full_name":"Ghazaryan, Areg","first_name":"Areg","orcid":"0000-0001-9666-3543"},{"full_name":"Lemeshko, Mikhail","first_name":"Mikhail","orcid":"0000-0002-6990-7802","id":"37CB05FA-F248-11E8-B48F-1D18A9856A87","last_name":"Lemeshko"},{"full_name":"Volosniev, Artem","first_name":"Artem","orcid":"0000-0003-0393-5525","id":"37D278BC-F248-11E8-B48F-1D18A9856A87","last_name":"Volosniev"}],"abstract":[{"text":"Nature creates electrons with two values of the spin projection quantum number. In certain applications, it is important to filter electrons with one spin projection from the rest. Such filtering is not trivial, since spin-dependent interactions are often weak, and cannot lead to any substantial effect. Here we propose an efficient spin filter based upon scattering from a two-dimensional crystal, which is made of aligned point magnets. The polarization of the outgoing electron flux is controlled by the crystal, and reaches maximum at specific values of the parameters. In our scheme, polarization increase is accompanied by higher reflectivity of the crystal. High transmission is feasible in scattering from a quantum cavity made of two crystals. Our findings can be used for studies of low-energy spin-dependent scattering from two-dimensional ordered structures made of magnetic atoms or aligned chiral molecules.","lang":"eng"}],"day":"09","doi":"10.1038/s42005-020-00445-8","article_type":"original","acknowledgement":"This work has received funding from the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant Agreement No. 754411 (A.G.V. and A.G.). M.L. acknowledges support by the Austrian Science Fund (FWF), under project No. P29902-N27, and by the European Research Council (ERC) Starting\r\nGrant No. 801770 (ANGULON).","intvolume":"         3","date_created":"2020-10-13T09:48:59Z","year":"2020","publication_identifier":{"issn":["2399-3650"]},"external_id":{"isi":["000581681000001"]},"title":"Filtering spins by scattering from a lattice of point magnets","has_accepted_license":"1","citation":{"ama":"Ghazaryan A, Lemeshko M, Volosniev A. Filtering spins by scattering from a lattice of point magnets. <i>Communications Physics</i>. 2020;3. doi:<a href=\"https://doi.org/10.1038/s42005-020-00445-8\">10.1038/s42005-020-00445-8</a>","mla":"Ghazaryan, Areg, et al. “Filtering Spins by Scattering from a Lattice of Point Magnets.” <i>Communications Physics</i>, vol. 3, 178, Springer Nature, 2020, doi:<a href=\"https://doi.org/10.1038/s42005-020-00445-8\">10.1038/s42005-020-00445-8</a>.","short":"A. Ghazaryan, M. Lemeshko, A. Volosniev, Communications Physics 3 (2020).","apa":"Ghazaryan, A., Lemeshko, M., &#38; Volosniev, A. (2020). Filtering spins by scattering from a lattice of point magnets. <i>Communications Physics</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s42005-020-00445-8\">https://doi.org/10.1038/s42005-020-00445-8</a>","chicago":"Ghazaryan, Areg, Mikhail Lemeshko, and Artem Volosniev. “Filtering Spins by Scattering from a Lattice of Point Magnets.” <i>Communications Physics</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1038/s42005-020-00445-8\">https://doi.org/10.1038/s42005-020-00445-8</a>.","ieee":"A. Ghazaryan, M. Lemeshko, and A. Volosniev, “Filtering spins by scattering from a lattice of point magnets,” <i>Communications Physics</i>, vol. 3. Springer Nature, 2020.","ista":"Ghazaryan A, Lemeshko M, Volosniev A. 2020. Filtering spins by scattering from a lattice of point magnets. Communications Physics. 3, 178."},"article_processing_charge":"Yes","file":[{"relation":"main_file","access_level":"open_access","checksum":"60cd35b99f0780acffc7b6060e49ec8b","file_id":"8662","date_created":"2020-10-14T15:16:28Z","file_name":"2020_CommPhysics_Ghazaryan.pdf","success":1,"creator":"dernst","content_type":"application/pdf","file_size":1462934,"date_updated":"2020-10-14T15:16:28Z"}],"publisher":"Springer Nature","ddc":["530"],"file_date_updated":"2020-10-14T15:16:28Z"},{"language":[{"iso":"eng"}],"publication":"Nature Communications","scopus_import":"1","type":"journal_article","department":[{"_id":"EdHa"}],"isi":1,"month":"10","publication_status":"published","volume":11,"status":"public","date_updated":"2026-04-02T14:29:58Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"article_number":"5037","quality_controlled":"1","_id":"8669","oa_version":"Published Version","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","date_published":"2020-10-07T00:00:00Z","author":[{"first_name":"Magdalena K.","full_name":"Sznurkowska, Magdalena K.","last_name":"Sznurkowska"},{"orcid":"0000-0001-6005-1561","full_name":"Hannezo, Edouard B","first_name":"Edouard B","last_name":"Hannezo","id":"3A9DB764-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Azzarelli, Roberta","first_name":"Roberta","last_name":"Azzarelli"},{"full_name":"Chatzeli, Lemonia","first_name":"Lemonia","last_name":"Chatzeli"},{"first_name":"Tatsuro","full_name":"Ikeda, Tatsuro","last_name":"Ikeda"},{"first_name":"Shosei","full_name":"Yoshida, Shosei","last_name":"Yoshida"},{"last_name":"Philpott","full_name":"Philpott, Anna","first_name":"Anna"},{"last_name":"Simons","full_name":"Simons, Benjamin D","first_name":"Benjamin D"}],"oa":1,"abstract":[{"lang":"eng","text":"Pancreatic islets play an essential role in regulating blood glucose level. Although the molecular pathways underlying islet cell differentiation are beginning to be resolved, the cellular basis of islet morphogenesis and fate allocation remain unclear. By combining unbiased and targeted lineage tracing, we address the events leading to islet formation in the mouse. From the statistical analysis of clones induced at multiple embryonic timepoints, here we show that, during the secondary transition, islet formation involves the aggregation of multiple equipotent endocrine progenitors that transition from a phase of stochastic amplification by cell division into a phase of sublineage restriction and limited islet fission. Together, these results explain quantitatively the heterogeneous size distribution and degree of polyclonality of maturing islets, as well as dispersion of progenitors within and between islets. Further, our results show that, during the secondary transition, α- and β-cells are generated in a contemporary manner. Together, these findings provide insight into the cellular basis of islet development."}],"day":"07","doi":"10.1038/s41467-020-18837-3","article_type":"original","year":"2020","date_created":"2020-10-18T22:01:35Z","intvolume":"        11","external_id":{"pmid":["33028844"],"isi":["000577244600003"]},"publication_identifier":{"eissn":["2041-1723"]},"title":"Tracing the cellular basis of islet specification in mouse pancreas","pmid":1,"has_accepted_license":"1","citation":{"ieee":"M. K. Sznurkowska <i>et al.</i>, “Tracing the cellular basis of islet specification in mouse pancreas,” <i>Nature Communications</i>, vol. 11. Springer Nature, 2020.","ista":"Sznurkowska MK, Hannezo EB, Azzarelli R, Chatzeli L, Ikeda T, Yoshida S, Philpott A, Simons BD. 2020. Tracing the cellular basis of islet specification in mouse pancreas. Nature Communications. 11, 5037.","apa":"Sznurkowska, M. K., Hannezo, E. B., Azzarelli, R., Chatzeli, L., Ikeda, T., Yoshida, S., … Simons, B. D. (2020). Tracing the cellular basis of islet specification in mouse pancreas. <i>Nature Communications</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s41467-020-18837-3\">https://doi.org/10.1038/s41467-020-18837-3</a>","chicago":"Sznurkowska, Magdalena K., Edouard B Hannezo, Roberta Azzarelli, Lemonia Chatzeli, Tatsuro Ikeda, Shosei Yoshida, Anna Philpott, and Benjamin D Simons. “Tracing the Cellular Basis of Islet Specification in Mouse Pancreas.” <i>Nature Communications</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1038/s41467-020-18837-3\">https://doi.org/10.1038/s41467-020-18837-3</a>.","short":"M.K. Sznurkowska, E.B. Hannezo, R. Azzarelli, L. Chatzeli, T. Ikeda, S. Yoshida, A. Philpott, B.D. Simons, Nature Communications 11 (2020).","mla":"Sznurkowska, Magdalena K., et al. “Tracing the Cellular Basis of Islet Specification in Mouse Pancreas.” <i>Nature Communications</i>, vol. 11, 5037, Springer Nature, 2020, doi:<a href=\"https://doi.org/10.1038/s41467-020-18837-3\">10.1038/s41467-020-18837-3</a>.","ama":"Sznurkowska MK, Hannezo EB, Azzarelli R, et al. Tracing the cellular basis of islet specification in mouse pancreas. <i>Nature Communications</i>. 2020;11. doi:<a href=\"https://doi.org/10.1038/s41467-020-18837-3\">10.1038/s41467-020-18837-3</a>"},"publisher":"Springer Nature","article_processing_charge":"No","file":[{"file_id":"8677","relation":"main_file","access_level":"open_access","checksum":"0ecc0eab72d2d50694852579611a6624","success":1,"creator":"dernst","file_name":"2020_NatureComm_Sznurkowska.pdf","content_type":"application/pdf","file_size":5540540,"date_updated":"2020-10-19T11:27:46Z","date_created":"2020-10-19T11:27:46Z"}],"ddc":["570"],"file_date_updated":"2020-10-19T11:27:46Z"},{"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"8670","oa_version":"Preprint","article_number":"102201","quality_controlled":"1","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/2007.06644"}],"status":"public","date_updated":"2025-07-10T11:57:14Z","isi":1,"month":"10","volume":61,"publication_status":"published","department":[{"_id":"JaMa"}],"type":"journal_article","scopus_import":"1","corr_author":"1","ec_funded":1,"project":[{"call_identifier":"H2020","grant_number":"754411","name":"ISTplus - Postdoctoral Fellowships","_id":"260C2330-B435-11E9-9278-68D0E5697425"}],"publication":"Journal of Mathematical Physics","language":[{"iso":"eng"}],"publisher":"AIP Publishing","article_processing_charge":"No","citation":{"ama":"Zhang H. Equality conditions of data processing inequality for α-z Rényi relative entropies. <i>Journal of Mathematical Physics</i>. 2020;61(10). doi:<a href=\"https://doi.org/10.1063/5.0022787\">10.1063/5.0022787</a>","mla":"Zhang, Haonan. “Equality Conditions of Data Processing Inequality for α-z Rényi Relative Entropies.” <i>Journal of Mathematical Physics</i>, vol. 61, no. 10, 102201, AIP Publishing, 2020, doi:<a href=\"https://doi.org/10.1063/5.0022787\">10.1063/5.0022787</a>.","short":"H. Zhang, Journal of Mathematical Physics 61 (2020).","apa":"Zhang, H. (2020). Equality conditions of data processing inequality for α-z Rényi relative entropies. <i>Journal of Mathematical Physics</i>. AIP Publishing. <a href=\"https://doi.org/10.1063/5.0022787\">https://doi.org/10.1063/5.0022787</a>","chicago":"Zhang, Haonan. “Equality Conditions of Data Processing Inequality for α-z Rényi Relative Entropies.” <i>Journal of Mathematical Physics</i>. AIP Publishing, 2020. <a href=\"https://doi.org/10.1063/5.0022787\">https://doi.org/10.1063/5.0022787</a>.","ista":"Zhang H. 2020. Equality conditions of data processing inequality for α-z Rényi relative entropies. Journal of Mathematical Physics. 61(10), 102201.","ieee":"H. Zhang, “Equality conditions of data processing inequality for α-z Rényi relative entropies,” <i>Journal of Mathematical Physics</i>, vol. 61, no. 10. AIP Publishing, 2020."},"title":"Equality conditions of data processing inequality for α-z Rényi relative entropies","external_id":{"arxiv":["2007.06644"],"isi":["000578529200001"]},"publication_identifier":{"issn":["0022-2488"]},"year":"2020","date_created":"2020-10-18T22:01:36Z","intvolume":"        61","acknowledgement":"This research was supported by the European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie Grant Agreement No. 754411. The author would like to thank Anna Vershynina and Sarah Chehade for their helpful comments.","issue":"10","article_type":"original","doi":"10.1063/5.0022787","day":"01","abstract":[{"lang":"eng","text":"The α–z Rényi relative entropies are a two-parameter family of Rényi relative entropies that are quantum generalizations of the classical α-Rényi relative entropies. In the work [Adv. Math. 365, 107053 (2020)], we decided the full range of (α, z) for which the data processing inequality (DPI) is valid. In this paper, we give algebraic conditions for the equality in DPI. For the full range of parameters (α, z), we give necessary conditions and sufficient conditions. For most parameters, we give equivalent conditions. This generalizes and strengthens the results of Leditzky et al. [Lett. Math. Phys. 107, 61–80 (2017)]."}],"author":[{"id":"D8F41E38-9E66-11E9-A9E2-65C2E5697425","last_name":"Zhang","first_name":"Haonan","full_name":"Zhang, Haonan"}],"arxiv":1,"oa":1,"date_published":"2020-10-01T00:00:00Z"},{"doi":"10.29252/ijmsi.15.2.117","acknowledgement":"We are very grateful to the anonymous reviewer for detailed comments and suggestions that significantly improved the presentation of this paper. The research was partially supported by a DOC fellowship of the Austrian Academy of Sciences.","issue":"2","article_type":"original","author":[{"full_name":"Shakiba, A.","first_name":"A.","last_name":"Shakiba"},{"orcid":"0000-0003-1702-6584","first_name":"Amir Kafshdar","full_name":"Goharshady, Amir Kafshdar","last_name":"Goharshady","id":"391365CE-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Hooshmandasl","first_name":"M.R.","full_name":"Hooshmandasl, M.R."},{"last_name":"Alambardar Meybodi","first_name":"M.","full_name":"Alambardar Meybodi, M."}],"arxiv":1,"oa":1,"date_published":"2020-10-01T00:00:00Z","day":"01","abstract":[{"lang":"eng","text":"We study relations between evidence theory and S-approximation spaces. Both theories have their roots in the analysis of Dempsterchr('39')s multivalued mappings and lower and upper probabilities, and have close relations to rough sets. We show that an S-approximation space, satisfying a monotonicity condition, can induce a natural belief structure which is a fundamental block in evidence theory. We also demonstrate that one can induce a natural belief structure on one set, given a belief structure on another set, if the two sets are related by a partial monotone S-approximation space. "}],"file":[{"date_created":"2020-10-19T11:14:20Z","content_type":"application/pdf","file_name":"2020_ijmsi_Shakiba_accepted.pdf","creator":"dernst","success":1,"date_updated":"2020-10-19T11:14:20Z","file_size":261688,"checksum":"f299661a6d51cda6d255a76be696f48d","access_level":"open_access","relation":"main_file","file_id":"8676"}],"publisher":"Iranian Academic Center for Education, Culture and Research","article_processing_charge":"No","citation":{"mla":"Shakiba, A., et al. “A Note on Belief Structures and S-Approximation Spaces.” <i>Iranian Journal of Mathematical Sciences and Informatics</i>, vol. 15, no. 2, Iranian Academic Center for Education, Culture and Research, 2020, pp. 117–28, doi:<a href=\"https://doi.org/10.29252/ijmsi.15.2.117\">10.29252/ijmsi.15.2.117</a>.","ama":"Shakiba A, Goharshady AK, Hooshmandasl MR, Alambardar Meybodi M. A note on belief structures and s-approximation spaces. <i>Iranian Journal of Mathematical Sciences and Informatics</i>. 2020;15(2):117-128. doi:<a href=\"https://doi.org/10.29252/ijmsi.15.2.117\">10.29252/ijmsi.15.2.117</a>","short":"A. Shakiba, A.K. Goharshady, M.R. Hooshmandasl, M. Alambardar Meybodi, Iranian Journal of Mathematical Sciences and Informatics 15 (2020) 117–128.","apa":"Shakiba, A., Goharshady, A. K., Hooshmandasl, M. R., &#38; Alambardar Meybodi, M. (2020). A note on belief structures and s-approximation spaces. <i>Iranian Journal of Mathematical Sciences and Informatics</i>. Iranian Academic Center for Education, Culture and Research. <a href=\"https://doi.org/10.29252/ijmsi.15.2.117\">https://doi.org/10.29252/ijmsi.15.2.117</a>","chicago":"Shakiba, A., Amir Kafshdar Goharshady, M.R. Hooshmandasl, and M. Alambardar Meybodi. “A Note on Belief Structures and S-Approximation Spaces.” <i>Iranian Journal of Mathematical Sciences and Informatics</i>. Iranian Academic Center for Education, Culture and Research, 2020. <a href=\"https://doi.org/10.29252/ijmsi.15.2.117\">https://doi.org/10.29252/ijmsi.15.2.117</a>.","ieee":"A. Shakiba, A. K. Goharshady, M. R. Hooshmandasl, and M. Alambardar Meybodi, “A note on belief structures and s-approximation spaces,” <i>Iranian Journal of Mathematical Sciences and Informatics</i>, vol. 15, no. 2. Iranian Academic Center for Education, Culture and Research, pp. 117–128, 2020.","ista":"Shakiba A, Goharshady AK, Hooshmandasl MR, Alambardar Meybodi M. 2020. A note on belief structures and s-approximation spaces. Iranian Journal of Mathematical Sciences and Informatics. 15(2), 117–128."},"file_date_updated":"2020-10-19T11:14:20Z","ddc":["000"],"external_id":{"arxiv":["1805.10672"]},"publication_identifier":{"issn":["1735-4463"],"eissn":["2008-9473"]},"year":"2020","date_created":"2020-10-18T22:01:36Z","intvolume":"        15","has_accepted_license":"1","title":"A note on belief structures and s-approximation spaces","scopus_import":"1","department":[{"_id":"KrCh"}],"type":"journal_article","language":[{"iso":"eng"}],"project":[{"name":"Quantitative Analysis of Probabilistic Systems with a focus on Crypto-Currencies","_id":"267066CE-B435-11E9-9278-68D0E5697425"}],"publication":"Iranian Journal of Mathematical Sciences and Informatics","quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"8671","oa_version":"Submitted Version","page":"117-128","month":"10","publication_status":"published","volume":15,"date_updated":"2025-04-15T07:55:04Z","status":"public"},{"page":"195-208","_id":"8672","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Published Version","quality_controlled":"1","status":"public","date_updated":"2025-07-10T11:57:15Z","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"volume":55,"publication_status":"published","month":"10","isi":1,"type":"journal_article","department":[{"_id":"EdHa"}],"scopus_import":"1","publication":"Developmental Cell","language":[{"iso":"eng"}],"ddc":["570"],"file_date_updated":"2021-02-04T10:20:02Z","citation":{"apa":"Chaigne, A., Labouesse, C., White, I. J., Agnew, M., Hannezo, E. B., Chalut, K. J., &#38; Paluch, E. K. (2020). Abscission couples cell division to embryonic stem cell fate. <i>Developmental Cell</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.devcel.2020.09.001\">https://doi.org/10.1016/j.devcel.2020.09.001</a>","chicago":"Chaigne, Agathe, Céline Labouesse, Ian J. White, Meghan Agnew, Edouard B Hannezo, Kevin J. Chalut, and Ewa K. Paluch. “Abscission Couples Cell Division to Embryonic Stem Cell Fate.” <i>Developmental Cell</i>. Elsevier, 2020. <a href=\"https://doi.org/10.1016/j.devcel.2020.09.001\">https://doi.org/10.1016/j.devcel.2020.09.001</a>.","ieee":"A. Chaigne <i>et al.</i>, “Abscission couples cell division to embryonic stem cell fate,” <i>Developmental Cell</i>, vol. 55, no. 2. Elsevier, pp. 195–208, 2020.","ista":"Chaigne A, Labouesse C, White IJ, Agnew M, Hannezo EB, Chalut KJ, Paluch EK. 2020. Abscission couples cell division to embryonic stem cell fate. Developmental Cell. 55(2), 195–208.","mla":"Chaigne, Agathe, et al. “Abscission Couples Cell Division to Embryonic Stem Cell Fate.” <i>Developmental Cell</i>, vol. 55, no. 2, Elsevier, 2020, pp. 195–208, doi:<a href=\"https://doi.org/10.1016/j.devcel.2020.09.001\">10.1016/j.devcel.2020.09.001</a>.","ama":"Chaigne A, Labouesse C, White IJ, et al. Abscission couples cell division to embryonic stem cell fate. <i>Developmental Cell</i>. 2020;55(2):195-208. doi:<a href=\"https://doi.org/10.1016/j.devcel.2020.09.001\">10.1016/j.devcel.2020.09.001</a>","short":"A. Chaigne, C. Labouesse, I.J. White, M. Agnew, E.B. Hannezo, K.J. Chalut, E.K. Paluch, Developmental Cell 55 (2020) 195–208."},"article_processing_charge":"No","publisher":"Elsevier","file":[{"date_created":"2021-02-04T10:20:02Z","date_updated":"2021-02-04T10:20:02Z","file_size":6929686,"creator":"dernst","file_name":"2020_DevelopmCell_Chaigne.pdf","success":1,"content_type":"application/pdf","relation":"main_file","checksum":"88e1a031a61689165d19a19c2f16d795","access_level":"open_access","file_id":"9086"}],"title":"Abscission couples cell division to embryonic stem cell fate","pmid":1,"has_accepted_license":"1","intvolume":"        55","date_created":"2020-10-18T22:01:37Z","year":"2020","publication_identifier":{"issn":["1534-5807"],"eissn":["1878-1551"]},"external_id":{"isi":["000582501100012"],"pmid":["32979313"]},"article_type":"original","issue":"2","acknowledgement":"This work was supported by the Medical Research Council UK (MRC Program award MC_UU_12018/5 ), the European Research Council (starting grant 311637 -MorphoCorDiv and consolidator grant 820188 -NanoMechShape to E.K.P.), and the Leverhulme Trust (Leverhulme Prize in Biological Sciences to E.K.P.). K.J.C. acknowledges support from the Royal Society (Royal Society Research Fellowship). A.C. acknowledges support from EMBO ( ALTF 2015-563 ), the Wellcome Trust ( 201334/Z/16/Z ), and the Fondation Bettencourt-Schueller (Prix Jeune Chercheur, 2015).","doi":"10.1016/j.devcel.2020.09.001","abstract":[{"lang":"eng","text":"Cell fate transitions are key to development and homeostasis. It is thus essential to understand the cellular mechanisms controlling fate transitions. Cell division has been implicated in fate decisions in many stem cell types, including neuronal and epithelial progenitors. In other stem cells, such as embryonic stem (ES) cells, the role of division remains unclear. Here, we show that exit from naive pluripotency in mouse ES cells generally occurs after a division. We further show that exit timing is strongly correlated between sister cells, which remain connected by cytoplasmic bridges long after division, and that bridge abscission progressively accelerates as cells exit naive pluripotency. Finally, interfering with abscission impairs naive pluripotency exit, and artificially inducing abscission accelerates it. Altogether, our data indicate that a switch in the division machinery leading to faster abscission regulates pluripotency exit. Our study identifies abscission as a key cellular process coupling cell division to fate transitions."}],"day":"26","date_published":"2020-10-26T00:00:00Z","oa":1,"author":[{"last_name":"Chaigne","first_name":"Agathe","full_name":"Chaigne, Agathe"},{"last_name":"Labouesse","full_name":"Labouesse, Céline","first_name":"Céline"},{"last_name":"White","first_name":"Ian J.","full_name":"White, Ian J."},{"last_name":"Agnew","full_name":"Agnew, Meghan","first_name":"Meghan"},{"orcid":"0000-0001-6005-1561","full_name":"Hannezo, Edouard B","first_name":"Edouard B","last_name":"Hannezo","id":"3A9DB764-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Chalut, Kevin J.","first_name":"Kevin J.","last_name":"Chalut"},{"last_name":"Paluch","first_name":"Ewa K.","full_name":"Paluch, Ewa K."}]},{"day":"09","abstract":[{"text":"Extrasynaptic actions of glutamate are limited by high-affinity transporters expressed by perisynaptic astroglial processes (PAPs): this helps maintain point-to-point transmission in excitatory circuits. Memory formation in the brain is associated with synaptic remodeling, but how this affects PAPs and therefore extrasynaptic glutamate actions is poorly understood. Here, we used advanced imaging methods, in situ and in vivo, to find that a classical synaptic memory mechanism, long-term potentiation (LTP), triggers withdrawal of PAPs from potentiated synapses. Optical glutamate sensors combined with patch-clamp and 3D molecular localization reveal that LTP induction thus prompts spatial retreat of astroglial glutamate transporters, boosting glutamate spillover and NMDA-receptor-mediated inter-synaptic cross-talk. The LTP-triggered PAP withdrawal involves NKCC1 transporters and the actin-controlling protein cofilin but does not depend on major Ca2+-dependent cascades in astrocytes. We have therefore uncovered a mechanism by which a memory trace at one synapse could alter signal handling by multiple neighboring connections.","lang":"eng"}],"oa":1,"author":[{"last_name":"Henneberger","full_name":"Henneberger, Christian","first_name":"Christian"},{"last_name":"Bard","first_name":"Lucie","full_name":"Bard, Lucie"},{"first_name":"Aude","full_name":"Panatier, Aude","last_name":"Panatier"},{"first_name":"James P.","full_name":"Reynolds, James P.","last_name":"Reynolds"},{"first_name":"Olga","full_name":"Kopach, Olga","last_name":"Kopach"},{"full_name":"Medvedev, Nikolay I.","first_name":"Nikolay I.","last_name":"Medvedev"},{"last_name":"Minge","full_name":"Minge, Daniel","first_name":"Daniel"},{"first_name":"Michel K.","full_name":"Herde, Michel K.","last_name":"Herde"},{"full_name":"Anders, Stefanie","first_name":"Stefanie","last_name":"Anders"},{"last_name":"Kraev","full_name":"Kraev, Igor","first_name":"Igor"},{"last_name":"Heller","full_name":"Heller, Janosch P.","first_name":"Janosch P."},{"last_name":"Rama","first_name":"Sylvain","full_name":"Rama, Sylvain"},{"last_name":"Zheng","first_name":"Kaiyu","full_name":"Zheng, Kaiyu"},{"full_name":"Jensen, Thomas P.","first_name":"Thomas P.","last_name":"Jensen"},{"id":"3D9C5D30-F248-11E8-B48F-1D18A9856A87","last_name":"Sanchez-Romero","first_name":"Inmaculada","full_name":"Sanchez-Romero, Inmaculada"},{"last_name":"Jackson","first_name":"Colin J.","full_name":"Jackson, Colin J."},{"orcid":"0000-0002-8023-9315","first_name":"Harald L","full_name":"Janovjak, Harald L","last_name":"Janovjak","id":"33BA6C30-F248-11E8-B48F-1D18A9856A87"},{"first_name":"Ole Petter","full_name":"Ottersen, Ole Petter","last_name":"Ottersen"},{"last_name":"Nagelhus","full_name":"Nagelhus, Erlend Arnulf","first_name":"Erlend Arnulf"},{"full_name":"Oliet, Stephane H.R.","first_name":"Stephane H.R.","last_name":"Oliet"},{"last_name":"Stewart","full_name":"Stewart, Michael G.","first_name":"Michael G."},{"last_name":"Nägerl","first_name":"U. VAlentin","full_name":"Nägerl, U. VAlentin"},{"first_name":"Dmitri A. ","full_name":"Rusakov, Dmitri A. ","last_name":"Rusakov"}],"date_published":"2020-12-09T00:00:00Z","issue":"5","acknowledgement":"We thank J. Angibaud for organotypic cultures and R. Chereau and J. Tonnesen for help with the STED microscope; also D. Gonzales and the Neurocentre Magendie INSERM U1215 Genotyping Platform, for breeding management and genotyping. This work was supported by the Wellcome Trust Principal Fellowships 101896 and 212251, ERC Advanced Grant 323113, ERC Proof-of-Concept Grant 767372, EC FP7 ITN 606950, and EU CSA 811011 (D.A.R.); NRW-Rückkehrerpogramm, UCL Excellence Fellowship, German Research Foundation (DFG) SPP1757 and SFB1089 (C.H.); Human Frontiers Science Program (C.H., C.J.J., and H.J.); EMBO Long-Term Fellowship (L.B.); Marie Curie FP7 PIRG08-GA-2010-276995 (A.P.), ASTROMODULATION (S.R.); Equipe FRM DEQ 201 303 26519, Conseil Régional d’Aquitaine R12056GG, INSERM (S.H.R.O.); ANR SUPERTri, ANR Castro (ANR-17-CE16-0002), R-13-BSV4-0007-01, Université de Bordeaux, labex BRAIN (S.H.R.O. and U.V.N.); CNRS (A.P., S.H.R.O., and U.V.N.); HFSP, ANR CEXC, and France-BioImaging ANR-10-INSB-04 (U.V.N.); and FP7 MemStick Project No. 201600 (M.G.S.).","article_type":"original","doi":"10.1016/j.neuron.2020.08.030","has_accepted_license":"1","title":"LTP induction boosts glutamate spillover by driving withdrawal of perisynaptic astroglia","pmid":1,"publication_identifier":{"issn":["0896-6273"],"eissn":["1097-4199"]},"external_id":{"pmid":["32976770"],"isi":["000603428000010"]},"intvolume":"       108","year":"2020","date_created":"2020-10-18T22:01:38Z","file_date_updated":"2020-12-10T14:42:09Z","ddc":["570"],"article_processing_charge":"No","file":[{"date_updated":"2020-12-10T14:42:09Z","file_size":7518960,"content_type":"application/pdf","file_name":"2020_Neuron_Henneberger.pdf","creator":"dernst","success":1,"date_created":"2020-12-10T14:42:09Z","file_id":"8939","checksum":"054562bb50165ef9a1f46631c1c5e36b","access_level":"open_access","relation":"main_file"}],"publisher":"Elsevier","citation":{"chicago":"Henneberger, Christian, Lucie Bard, Aude Panatier, James P. Reynolds, Olga Kopach, Nikolay I. Medvedev, Daniel Minge, et al. “LTP Induction Boosts Glutamate Spillover by Driving Withdrawal of Perisynaptic Astroglia.” <i>Neuron</i>. Elsevier, 2020. <a href=\"https://doi.org/10.1016/j.neuron.2020.08.030\">https://doi.org/10.1016/j.neuron.2020.08.030</a>.","apa":"Henneberger, C., Bard, L., Panatier, A., Reynolds, J. P., Kopach, O., Medvedev, N. I., … Rusakov, D. A. (2020). LTP induction boosts glutamate spillover by driving withdrawal of perisynaptic astroglia. <i>Neuron</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.neuron.2020.08.030\">https://doi.org/10.1016/j.neuron.2020.08.030</a>","ista":"Henneberger C, Bard L, Panatier A, Reynolds JP, Kopach O, Medvedev NI, Minge D, Herde MK, Anders S, Kraev I, Heller JP, Rama S, Zheng K, Jensen TP, Sanchez-Romero I, Jackson CJ, Janovjak HL, Ottersen OP, Nagelhus EA, Oliet SHR, Stewart MG, Nägerl UVa, Rusakov DA. 2020. LTP induction boosts glutamate spillover by driving withdrawal of perisynaptic astroglia. Neuron. 108(5), P919–936.E11.","ieee":"C. Henneberger <i>et al.</i>, “LTP induction boosts glutamate spillover by driving withdrawal of perisynaptic astroglia,” <i>Neuron</i>, vol. 108, no. 5. Elsevier, p. P919–936.E11, 2020.","ama":"Henneberger C, Bard L, Panatier A, et al. LTP induction boosts glutamate spillover by driving withdrawal of perisynaptic astroglia. <i>Neuron</i>. 2020;108(5):P919-936.E11. doi:<a href=\"https://doi.org/10.1016/j.neuron.2020.08.030\">10.1016/j.neuron.2020.08.030</a>","mla":"Henneberger, Christian, et al. “LTP Induction Boosts Glutamate Spillover by Driving Withdrawal of Perisynaptic Astroglia.” <i>Neuron</i>, vol. 108, no. 5, Elsevier, 2020, p. P919–936.E11, doi:<a href=\"https://doi.org/10.1016/j.neuron.2020.08.030\">10.1016/j.neuron.2020.08.030</a>.","short":"C. Henneberger, L. Bard, A. Panatier, J.P. Reynolds, O. Kopach, N.I. Medvedev, D. Minge, M.K. Herde, S. Anders, I. Kraev, J.P. Heller, S. Rama, K. Zheng, T.P. Jensen, I. Sanchez-Romero, C.J. Jackson, H.L. Janovjak, O.P. Ottersen, E.A. Nagelhus, S.H.R. Oliet, M.G. Stewart, U.Va. Nägerl, D.A. Rusakov, Neuron 108 (2020) P919–936.E11."},"publication":"Neuron","language":[{"iso":"eng"}],"department":[{"_id":"HaJa"}],"type":"journal_article","scopus_import":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"date_updated":"2026-04-16T09:33:03Z","status":"public","publication_status":"published","volume":108,"month":"12","isi":1,"_id":"8674","oa_version":"Published Version","page":"P919-936.E11","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","quality_controlled":"1"},{"abstract":[{"text":"A central goal of artificial intelligence in high-stakes decision-making applications is to design a single algorithm that simultaneously expresses generalizability by learning coherent representations of their world and interpretable explanations of its dynamics. Here, we combine brain-inspired neural computation principles and scalable deep learning architectures to design compact neural controllers for task-specific compartments of a full-stack autonomous vehicle control system. We discover that a single algorithm with 19 control neurons, connecting 32 encapsulated input features to outputs by 253 synapses, learns to map high-dimensional inputs into steering commands. This system shows superior generalizability, interpretability and robustness compared with orders-of-magnitude larger black-box learning systems. The obtained neural agents enable high-fidelity autonomy for task-specific parts of a complex autonomous system.","lang":"eng"}],"day":"01","date_published":"2020-10-01T00:00:00Z","author":[{"last_name":"Lechner","id":"3DC22916-F248-11E8-B48F-1D18A9856A87","full_name":"Lechner, Mathias","first_name":"Mathias"},{"last_name":"Hasani","full_name":"Hasani, Ramin","first_name":"Ramin"},{"last_name":"Amini","first_name":"Alexander","full_name":"Amini, Alexander"},{"full_name":"Henzinger, Thomas A","first_name":"Thomas A","orcid":"0000-0002-2985-7724","id":"40876CD8-F248-11E8-B48F-1D18A9856A87","last_name":"Henzinger"},{"first_name":"Daniela","full_name":"Rus, Daniela","last_name":"Rus"},{"last_name":"Grosu","first_name":"Radu","full_name":"Grosu, Radu"}],"article_type":"original","doi":"10.1038/s42256-020-00237-3","title":"Neural circuit policies enabling auditable autonomy","intvolume":"         2","year":"2020","date_created":"2020-10-19T13:46:06Z","publication_identifier":{"eissn":["2522-5839"]},"external_id":{"isi":["000583337200011"]},"citation":{"chicago":"Lechner, Mathias, Ramin Hasani, Alexander Amini, Thomas A Henzinger, Daniela Rus, and Radu Grosu. “Neural Circuit Policies Enabling Auditable Autonomy.” <i>Nature Machine Intelligence</i>. Springer Nature, 2020. <a href=\"https://doi.org/10.1038/s42256-020-00237-3\">https://doi.org/10.1038/s42256-020-00237-3</a>.","apa":"Lechner, M., Hasani, R., Amini, A., Henzinger, T. A., Rus, D., &#38; Grosu, R. (2020). Neural circuit policies enabling auditable autonomy. <i>Nature Machine Intelligence</i>. Springer Nature. <a href=\"https://doi.org/10.1038/s42256-020-00237-3\">https://doi.org/10.1038/s42256-020-00237-3</a>","ieee":"M. Lechner, R. Hasani, A. Amini, T. A. Henzinger, D. Rus, and R. Grosu, “Neural circuit policies enabling auditable autonomy,” <i>Nature Machine Intelligence</i>, vol. 2. Springer Nature, pp. 642–652, 2020.","ista":"Lechner M, Hasani R, Amini A, Henzinger TA, Rus D, Grosu R. 2020. Neural circuit policies enabling auditable autonomy. Nature Machine Intelligence. 2, 642–652.","mla":"Lechner, Mathias, et al. “Neural Circuit Policies Enabling Auditable Autonomy.” <i>Nature Machine Intelligence</i>, vol. 2, Springer Nature, 2020, pp. 642–52, doi:<a href=\"https://doi.org/10.1038/s42256-020-00237-3\">10.1038/s42256-020-00237-3</a>.","ama":"Lechner M, Hasani R, Amini A, Henzinger TA, Rus D, Grosu R. Neural circuit policies enabling auditable autonomy. <i>Nature Machine Intelligence</i>. 2020;2:642-652. doi:<a href=\"https://doi.org/10.1038/s42256-020-00237-3\">10.1038/s42256-020-00237-3</a>","short":"M. Lechner, R. Hasani, A. Amini, T.A. Henzinger, D. Rus, R. Grosu, Nature Machine Intelligence 2 (2020) 642–652."},"article_processing_charge":"No","publisher":"Springer Nature","publication":"Nature Machine Intelligence","project":[{"name":"Formal methods for the design and analysis of complex systems","_id":"25F42A32-B435-11E9-9278-68D0E5697425","call_identifier":"FWF","grant_number":"Z211"}],"language":[{"iso":"eng"}],"type":"journal_article","department":[{"_id":"ToHe"}],"scopus_import":"1","date_updated":"2025-04-15T06:25:57Z","status":"public","volume":2,"publication_status":"published","month":"10","isi":1,"_id":"8679","oa_version":"None","page":"642-652","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","quality_controlled":"1","related_material":{"link":[{"relation":"press_release","description":"News on IST Homepage","url":"https://ist.ac.at/en/news/new-deep-learning-models/"}]}},{"scopus_import":"1","ec_funded":1,"department":[{"_id":"CaHe"}],"type":"journal_article","language":[{"iso":"eng"}],"project":[{"grant_number":"742573","call_identifier":"H2020","name":"Interaction and feedback between cell mechanics and fate specification in vertebrate gastrulation","_id":"260F1432-B435-11E9-9278-68D0E5697425"}],"keyword":["Multidisciplinary"],"publication":"Science","related_material":{"link":[{"description":"News on IST Homepage","relation":"press_release","url":"https://ist.ac.at/en/news/sticking-together/"}]},"quality_controlled":"1","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"8680","oa_version":"Preprint","page":"113-116","isi":1,"month":"10","publication_status":"published","volume":370,"main_file_link":[{"open_access":"1","url":"https://www.biorxiv.org/content/10.1101/803635v1"}],"status":"public","date_updated":"2025-06-12T07:00:41Z","doi":"10.1126/science.aba6637","acknowledgement":"We thank the members of the Megason and Heisenberg labs for critical discussions of and technical assistance during the work and B. Appel, S. Holley, J. Jontes, and D. Gilmour for transgenic fish. This work is supported by the Damon Runyon Cancer Foundation, a NICHD K99 fellowship (1K99HD092623), a Travelling Fellowship of the Company of Biologists, a Collaborative Research grant from the Burroughs Wellcome Foundation (T.Y.-C.T.), NIH grant  01GM107733 (T.Y.-C.T. and S.G.M.), NIH grant R01NS102322 (T.C.-C. and H.K.), and an ERC advanced grant\r\n(MECSPEC) (C.-P.H.).","issue":"6512","article_type":"original","author":[{"first_name":"Tony Y.-C.","full_name":"Tsai, Tony Y.-C.","last_name":"Tsai"},{"first_name":"Mateusz K","full_name":"Sikora, Mateusz K","id":"2F74BCDE-F248-11E8-B48F-1D18A9856A87","last_name":"Sikora"},{"full_name":"Xia, Peng","first_name":"Peng","orcid":"0000-0002-5419-7756","id":"4AB6C7D0-F248-11E8-B48F-1D18A9856A87","last_name":"Xia"},{"last_name":"Colak-Champollion","first_name":"Tugba","full_name":"Colak-Champollion, Tugba"},{"full_name":"Knaut, Holger","first_name":"Holger","last_name":"Knaut"},{"last_name":"Heisenberg","id":"39427864-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-0912-4566","full_name":"Heisenberg, Carl-Philipp J","first_name":"Carl-Philipp J"},{"first_name":"Sean G.","full_name":"Megason, Sean G.","last_name":"Megason"}],"oa":1,"date_published":"2020-10-02T00:00:00Z","day":"02","abstract":[{"lang":"eng","text":"Animal development entails the organization of specific cell types in space and time, and spatial patterns must form in a robust manner. In the zebrafish spinal cord, neural progenitors form stereotypic patterns despite noisy morphogen signaling and large-scale cellular rearrangements during morphogenesis and growth. By directly measuring adhesion forces and preferences for three types of endogenous neural progenitors, we provide evidence for the differential adhesion model in which differences in intercellular adhesion mediate cell sorting. Cell type–specific combinatorial expression of different classes of cadherins (N-cadherin, cadherin 11, and protocadherin 19) results in homotypic preference ex vivo and patterning robustness in vivo. Furthermore, the differential adhesion code is regulated by the sonic hedgehog morphogen gradient. We propose that robust patterning during tissue morphogenesis results from interplay between adhesion-based self-organization and morphogen-directed patterning."}],"publisher":"American Association for the Advancement of Science","article_processing_charge":"No","citation":{"short":"T.Y.-C. Tsai, M.K. Sikora, P. Xia, T. Colak-Champollion, H. Knaut, C.-P.J. Heisenberg, S.G. Megason, Science 370 (2020) 113–116.","ama":"Tsai TY-C, Sikora MK, Xia P, et al. An adhesion code ensures robust pattern formation during tissue morphogenesis. <i>Science</i>. 2020;370(6512):113-116. doi:<a href=\"https://doi.org/10.1126/science.aba6637\">10.1126/science.aba6637</a>","mla":"Tsai, Tony Y. C., et al. “An Adhesion Code Ensures Robust Pattern Formation during Tissue Morphogenesis.” <i>Science</i>, vol. 370, no. 6512, American Association for the Advancement of Science, 2020, pp. 113–16, doi:<a href=\"https://doi.org/10.1126/science.aba6637\">10.1126/science.aba6637</a>.","ista":"Tsai TY-C, Sikora MK, Xia P, Colak-Champollion T, Knaut H, Heisenberg C-PJ, Megason SG. 2020. An adhesion code ensures robust pattern formation during tissue morphogenesis. Science. 370(6512), 113–116.","ieee":"T. Y.-C. Tsai <i>et al.</i>, “An adhesion code ensures robust pattern formation during tissue morphogenesis,” <i>Science</i>, vol. 370, no. 6512. American Association for the Advancement of Science, pp. 113–116, 2020.","chicago":"Tsai, Tony Y.-C., Mateusz K Sikora, Peng Xia, Tugba Colak-Champollion, Holger Knaut, Carl-Philipp J Heisenberg, and Sean G. Megason. “An Adhesion Code Ensures Robust Pattern Formation during Tissue Morphogenesis.” <i>Science</i>. American Association for the Advancement of Science, 2020. <a href=\"https://doi.org/10.1126/science.aba6637\">https://doi.org/10.1126/science.aba6637</a>.","apa":"Tsai, T. Y.-C., Sikora, M. K., Xia, P., Colak-Champollion, T., Knaut, H., Heisenberg, C.-P. J., &#38; Megason, S. G. (2020). An adhesion code ensures robust pattern formation during tissue morphogenesis. <i>Science</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/science.aba6637\">https://doi.org/10.1126/science.aba6637</a>"},"external_id":{"isi":["000579169000053"],"pmid":["33004519"]},"publication_identifier":{"issn":["0036-8075"],"eissn":["1095-9203"]},"date_created":"2020-10-19T14:09:38Z","year":"2020","intvolume":"       370","pmid":1,"title":"An adhesion code ensures robust pattern formation during tissue morphogenesis"},{"abstract":[{"text":"A look at international activities on Open Science reveals a broad spectrum from individual institutional policies to national action plans. The present Recommendations for a National Open Science Strategy in Austria are based on these international initiatives and present practical considerations for their coordinated implementation with regard to strategic developments in research, technology and innovation (RTI) in Austria until 2030. They are addressed to all relevant actors in the RTI system, in particular to Research Performing Organisations, Research Funding Organisations, Research Policy, memory institutions such as Libraries and Researchers. The recommendation paper was developed from 2018 to 2020 by the OANA working group \"Open Science Strategy\" and published for the first time in spring 2020 for a public consultation. The now available final version of the recommendation document, which contains feedback and comments from the consultation, is intended to provide an impetus for further discussion and implementation of Open Science in Austria and serves as a contribution and basis for a potential national Open Science Strategy in Austria. The document builds on the diverse expertise of the authors (academia, administration, library and archive, information technology, science policy, funding system, etc.) and reflects their personal experiences and opinions.","lang":"eng"},{"lang":"ger","text":"Der Blick auf internationale Aktivitäten zu Open Science zeigt ein breites Spektrum von einzelnen institutionellen Policies bis hin zu nationalen Aktionsplänen. Die vorliegenden Empfehlungen für eine nationale Open Science Strategie in Österreich orientieren sich an diesen internationalen Initiativen und stellen praktische Überlegungen für ihre koordinierte Implementierung im Hinblick auf strategische Entwicklungen in Forschung, Technologie und Innovation (FTI) bis 2030 in Österreich dar. Dabei richten sie sich an alle relevanten Akteur*innen im FTI System, im Besonderen an Forschungsstätten, Forschungsförderer, Forschungspolitik, Gedächtnisinstitutionen wie Bibliotheken und Wissenschafter*innen. Das Empfehlungspapier wurde von 2018 bis 2020 von der OANA-Arbeitsgruppe \"Open Science Strategie\" entwickelt und im Frühling 2020 das erste Mal für eine öffentliche Konsultation veröffentlicht. Die nun vorliegende finale Version des Empfehlungsdokuments, die Feedback und Kommentare aus der Konsultation enthält, soll ein Anstoß für die weitere Diskussion und Umsetzung von Open Science in Österreich sein und als Beitrag und Grundlage einer potentiellen nationalen Open Science Strategie in Österreich dienen. Das Dokument baut auf der vielfältigen Expertise der Autor*innen auf (Wissenschaft, Administration, Bibliothek und Archiv, Informationstechnologie, Wissenschaftspolitik, Förderwesen etc.) und spiegelt deren persönliche Erfahrungen und Meinung wider."}],"day":"21","date_published":"2020-10-21T00:00:00Z","oa":1,"author":[{"full_name":"Mayer, Katja","first_name":"Katja","last_name":"Mayer"},{"full_name":"Rieck, Katharina","first_name":"Katharina","last_name":"Rieck"},{"last_name":"Reichmann","full_name":"Reichmann, Stefan","first_name":"Stefan"},{"orcid":"0000-0002-6026-4409","first_name":"Patrick","full_name":"Danowski, Patrick","last_name":"Danowski","id":"2EBD1598-F248-11E8-B48F-1D18A9856A87"},{"full_name":"Graschopf, Anton","first_name":"Anton","last_name":"Graschopf"},{"last_name":"König","first_name":"Thomas","full_name":"König, Thomas"},{"full_name":"Kraker, Peter","first_name":"Peter","last_name":"Kraker"},{"first_name":"Patrick","full_name":"Lehner, Patrick","last_name":"Lehner"},{"full_name":"Reckling, Falk","first_name":"Falk","last_name":"Reckling"},{"full_name":"Ross-Hellauer, Tony","first_name":"Tony","last_name":"Ross-Hellauer"},{"first_name":"Daniel","full_name":"Spichtinger, Daniel","last_name":"Spichtinger"},{"last_name":"Tzatzanis","first_name":"Michalis","full_name":"Tzatzanis, Michalis"},{"first_name":"Stefanie","full_name":"Schürz, Stefanie","last_name":"Schürz"}],"language":[{"iso":"ger"}],"type":"working_paper","department":[{"_id":"E-Lib"}],"doi":"10.5281/ZENODO.4109242","title":"Empfehlungen für eine nationale Open Science Strategie in Österreich / Recommendations for a National Open Science Strategy in Austria","status":"public","date_updated":"2020-10-23T09:34:40Z","has_accepted_license":"1","tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode"},"year":"2020","date_created":"2020-10-23T09:08:28Z","month":"10","publication_status":"published","_id":"8695","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","page":"36","oa_version":"Published Version","ddc":["020"],"file_date_updated":"2020-10-23T09:29:45Z","citation":{"ista":"Mayer K, Rieck K, Reichmann S, Danowski P, Graschopf A, König T, Kraker P, Lehner P, Reckling F, Ross-Hellauer T, Spichtinger D, Tzatzanis M, Schürz S. 2020. Empfehlungen für eine nationale Open Science Strategie in Österreich / Recommendations for a National Open Science Strategy in Austria, OANA, 36p.","ieee":"K. Mayer <i>et al.</i>, <i>Empfehlungen für eine nationale Open Science Strategie in Österreich / Recommendations for a National Open Science Strategy in Austria</i>. OANA, 2020.","apa":"Mayer, K., Rieck, K., Reichmann, S., Danowski, P., Graschopf, A., König, T., … Schürz, S. (2020). <i>Empfehlungen für eine nationale Open Science Strategie in Österreich / Recommendations for a National Open Science Strategy in Austria</i>. OANA. <a href=\"https://doi.org/10.5281/ZENODO.4109242\">https://doi.org/10.5281/ZENODO.4109242</a>","chicago":"Mayer, Katja, Katharina Rieck, Stefan Reichmann, Patrick Danowski, Anton Graschopf, Thomas König, Peter Kraker, et al. <i>Empfehlungen für eine nationale Open Science Strategie in Österreich / Recommendations for a National Open Science Strategy in Austria</i>. OANA, 2020. <a href=\"https://doi.org/10.5281/ZENODO.4109242\">https://doi.org/10.5281/ZENODO.4109242</a>.","short":"K. Mayer, K. Rieck, S. Reichmann, P. Danowski, A. Graschopf, T. König, P. Kraker, P. Lehner, F. Reckling, T. Ross-Hellauer, D. Spichtinger, M. Tzatzanis, S. Schürz, Empfehlungen für eine nationale Open Science Strategie in Österreich / Recommendations for a National Open Science Strategy in Austria, OANA, 2020.","mla":"Mayer, Katja, et al. <i>Empfehlungen für eine nationale Open Science Strategie in Österreich / Recommendations for a National Open Science Strategy in Austria</i>. OANA, 2020, doi:<a href=\"https://doi.org/10.5281/ZENODO.4109242\">10.5281/ZENODO.4109242</a>.","ama":"Mayer K, Rieck K, Reichmann S, et al. <i>Empfehlungen für eine nationale Open Science Strategie in Österreich / Recommendations for a National Open Science Strategy in Austria</i>. OANA; 2020. doi:<a href=\"https://doi.org/10.5281/ZENODO.4109242\">10.5281/ZENODO.4109242</a>"},"article_processing_charge":"No","publisher":"OANA","file":[{"date_created":"2020-10-23T09:29:45Z","content_type":"application/pdf","file_name":"2020_OANA_Mayer.pdf","creator":"dernst","success":1,"date_updated":"2020-10-23T09:29:45Z","file_size":2298363,"checksum":"8eba912bb4b20b4f82f8010f2110461a","access_level":"open_access","relation":"main_file","file_id":"8696"}]},{"language":[{"iso":"eng"}],"publication":"Nonlinearity","corr_author":"1","scopus_import":"1","type":"journal_article","department":[{"_id":"JuFi"}],"publication_status":"published","volume":33,"month":"11","isi":1,"date_updated":"2026-04-02T14:31:34Z","status":"public","tmp":{"image":"/images/cc_by.png","short":"CC BY (3.0)","name":"Creative Commons Attribution 3.0 Unported (CC BY 3.0)","legal_code_url":"https://creativecommons.org/licenses/by/3.0/legalcode"},"quality_controlled":"1","page":"5733-5772","_id":"8697","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","oa_version":"Published Version","date_published":"2020-11-01T00:00:00Z","oa":1,"author":[{"id":"2C12A0B0-F248-11E8-B48F-1D18A9856A87","last_name":"Fischer","full_name":"Fischer, Julian L","first_name":"Julian L","orcid":"0000-0002-0479-558X"},{"last_name":"Kniely","id":"2CA2C08C-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-5645-4333","full_name":"Kniely, Michael","first_name":"Michael"}],"arxiv":1,"abstract":[{"text":"In the computation of the material properties of random alloys, the method of 'special quasirandom structures' attempts to approximate the properties of the alloy on a finite volume with higher accuracy by replicating certain statistics of the random atomic lattice in the finite volume as accurately as possible. In the present work, we provide a rigorous justification for a variant of this method in the framework of the Thomas–Fermi–von Weizsäcker (TFW) model. Our approach is based on a recent analysis of a related variance reduction method in stochastic homogenization of linear elliptic PDEs and the locality properties of the TFW model. Concerning the latter, we extend an exponential locality result by Nazar and Ortner to include point charges, a result that may be of independent interest.","lang":"eng"}],"day":"01","doi":"10.1088/1361-6544/ab9728","article_type":"original","issue":"11","intvolume":"        33","year":"2020","date_created":"2020-10-25T23:01:16Z","publication_identifier":{"issn":["0951-7715"],"eissn":["1361-6544"]},"external_id":{"arxiv":["1906.12245"],"isi":["000576492700001"]},"title":"Variance reduction for effective energies of random lattices in the Thomas-Fermi-von Weizsäcker model","has_accepted_license":"1","citation":{"ieee":"J. L. Fischer and M. Kniely, “Variance reduction for effective energies of random lattices in the Thomas-Fermi-von Weizsäcker model,” <i>Nonlinearity</i>, vol. 33, no. 11. IOP Publishing, pp. 5733–5772, 2020.","ista":"Fischer JL, Kniely M. 2020. Variance reduction for effective energies of random lattices in the Thomas-Fermi-von Weizsäcker model. Nonlinearity. 33(11), 5733–5772.","apa":"Fischer, J. L., &#38; Kniely, M. (2020). Variance reduction for effective energies of random lattices in the Thomas-Fermi-von Weizsäcker model. <i>Nonlinearity</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1361-6544/ab9728\">https://doi.org/10.1088/1361-6544/ab9728</a>","chicago":"Fischer, Julian L, and Michael Kniely. “Variance Reduction for Effective Energies of Random Lattices in the Thomas-Fermi-von Weizsäcker Model.” <i>Nonlinearity</i>. IOP Publishing, 2020. <a href=\"https://doi.org/10.1088/1361-6544/ab9728\">https://doi.org/10.1088/1361-6544/ab9728</a>.","short":"J.L. Fischer, M. Kniely, Nonlinearity 33 (2020) 5733–5772.","mla":"Fischer, Julian L., and Michael Kniely. “Variance Reduction for Effective Energies of Random Lattices in the Thomas-Fermi-von Weizsäcker Model.” <i>Nonlinearity</i>, vol. 33, no. 11, IOP Publishing, 2020, pp. 5733–72, doi:<a href=\"https://doi.org/10.1088/1361-6544/ab9728\">10.1088/1361-6544/ab9728</a>.","ama":"Fischer JL, Kniely M. Variance reduction for effective energies of random lattices in the Thomas-Fermi-von Weizsäcker model. <i>Nonlinearity</i>. 2020;33(11):5733-5772. doi:<a href=\"https://doi.org/10.1088/1361-6544/ab9728\">10.1088/1361-6544/ab9728</a>"},"file":[{"date_updated":"2020-10-27T12:09:57Z","file_size":1223899,"content_type":"application/pdf","success":1,"creator":"cziletti","file_name":"2020_Nonlinearity_Fischer.pdf","date_created":"2020-10-27T12:09:57Z","file_id":"8710","access_level":"open_access","checksum":"ed90bc6eb5f32ee6157fef7f3aabc057","relation":"main_file"}],"article_processing_charge":"Yes (via OA deal)","publisher":"IOP Publishing","ddc":["510"],"file_date_updated":"2020-10-27T12:09:57Z"},{"publication":"Proceedings of the National Academy of Sciences of the United States of America","language":[{"iso":"eng"}],"department":[{"_id":"GaTk"}],"type":"journal_article","scopus_import":"1","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)"},"status":"public","date_updated":"2025-07-10T11:57:16Z","isi":1,"volume":117,"month":"10","publication_status":"published","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","oa_version":"Published Version","_id":"8698","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","page":"25066-25073","quality_controlled":"1","day":"06","abstract":[{"lang":"eng","text":"The brain represents and reasons probabilistically about complex stimuli and motor actions using a noisy, spike-based neural code. A key building block for such neural computations, as well as the basis for supervised and unsupervised learning, is the ability to estimate the surprise or likelihood of incoming high-dimensional neural activity patterns. Despite progress in statistical modeling of neural responses and deep learning, current approaches either do not scale to large neural populations or cannot be implemented using biologically realistic mechanisms. Inspired by the sparse and random connectivity of real neuronal circuits, we present a model for neural codes that accurately estimates the likelihood of individual spiking patterns and has a straightforward, scalable, efficient, learnable, and realistic neural implementation. This model’s performance on simultaneously recorded spiking activity of >100 neurons in the monkey visual and prefrontal cortices is comparable with or better than that of state-of-the-art models. Importantly, the model can be learned using a small number of samples and using a local learning rule that utilizes noise intrinsic to neural circuits. Slower, structural changes in random connectivity, consistent with rewiring and pruning processes, further improve the efficiency and sparseness of the resulting neural representations. Our results merge insights from neuroanatomy, machine learning, and theoretical neuroscience to suggest random sparse connectivity as a key design principle for neuronal computation."}],"author":[{"full_name":"Maoz, Ori","first_name":"Ori","last_name":"Maoz"},{"last_name":"Tkačik","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-6699-1455","full_name":"Tkačik, Gašper","first_name":"Gašper"},{"last_name":"Esteki","first_name":"Mohamad Saleh","full_name":"Esteki, Mohamad Saleh"},{"last_name":"Kiani","first_name":"Roozbeh","full_name":"Kiani, Roozbeh"},{"last_name":"Schneidman","first_name":"Elad","full_name":"Schneidman, Elad"}],"oa":1,"date_published":"2020-10-06T00:00:00Z","acknowledgement":"We thank Udi Karpas, Roy Harpaz, Tal Tamir, Adam Haber, and Amir Bar for discussions and suggestions; and especially Oren Forkosh and Walter Senn for invaluable discussions of the learning rule. This work was supported by European Research Council Grant 311238 (to E.S.) and Israel Science Foundation Grant 1629/12 (to E.S.); as well as research support from Martin Kushner Schnur and Mr. and Mrs. Lawrence Feis (E.S.); National Institute of Mental Health Grant R01MH109180 (to R.K.); a Pew Scholarship in Biomedical Sciences (to R.K.); Simons Collaboration on the Global Brain Grant 542997 (to R.K. and E.S.); and a CRCNS (Collaborative Research in Computational Neuroscience) grant (to R.K. and E.S.).","issue":"40","article_type":"original","doi":"10.1073/pnas.1912804117","has_accepted_license":"1","pmid":1,"title":"Learning probabilistic neural representations with randomly connected circuits","external_id":{"isi":["000579045200012"],"pmid":["32948691"]},"publication_identifier":{"eissn":["1091-6490"],"issn":["0027-8424"]},"date_created":"2020-10-25T23:01:16Z","year":"2020","intvolume":"       117","file_date_updated":"2020-10-27T14:57:50Z","ddc":["570"],"publisher":"National Academy of Sciences","file":[{"relation":"main_file","access_level":"open_access","checksum":"c6a24fdecf3f28faf447078e7a274a88","file_id":"8713","date_created":"2020-10-27T14:57:50Z","date_updated":"2020-10-27T14:57:50Z","file_size":1755359,"creator":"cziletti","success":1,"file_name":"2020_PNAS_Maoz.pdf","content_type":"application/pdf"}],"article_processing_charge":"No","citation":{"short":"O. Maoz, G. Tkačik, M.S. Esteki, R. Kiani, E. Schneidman, Proceedings of the National Academy of Sciences of the United States of America 117 (2020) 25066–25073.","ama":"Maoz O, Tkačik G, Esteki MS, Kiani R, Schneidman E. Learning probabilistic neural representations with randomly connected circuits. <i>Proceedings of the National Academy of Sciences of the United States of America</i>. 2020;117(40):25066-25073. doi:<a href=\"https://doi.org/10.1073/pnas.1912804117\">10.1073/pnas.1912804117</a>","mla":"Maoz, Ori, et al. “Learning Probabilistic Neural Representations with Randomly Connected Circuits.” <i>Proceedings of the National Academy of Sciences of the United States of America</i>, vol. 117, no. 40, National Academy of Sciences, 2020, pp. 25066–73, doi:<a href=\"https://doi.org/10.1073/pnas.1912804117\">10.1073/pnas.1912804117</a>.","ista":"Maoz O, Tkačik G, Esteki MS, Kiani R, Schneidman E. 2020. Learning probabilistic neural representations with randomly connected circuits. Proceedings of the National Academy of Sciences of the United States of America. 117(40), 25066–25073.","ieee":"O. Maoz, G. Tkačik, M. S. Esteki, R. Kiani, and E. Schneidman, “Learning probabilistic neural representations with randomly connected circuits,” <i>Proceedings of the National Academy of Sciences of the United States of America</i>, vol. 117, no. 40. National Academy of Sciences, pp. 25066–25073, 2020.","apa":"Maoz, O., Tkačik, G., Esteki, M. S., Kiani, R., &#38; Schneidman, E. (2020). Learning probabilistic neural representations with randomly connected circuits. <i>Proceedings of the National Academy of Sciences of the United States of America</i>. National Academy of Sciences. <a href=\"https://doi.org/10.1073/pnas.1912804117\">https://doi.org/10.1073/pnas.1912804117</a>","chicago":"Maoz, Ori, Gašper Tkačik, Mohamad Saleh Esteki, Roozbeh Kiani, and Elad Schneidman. “Learning Probabilistic Neural Representations with Randomly Connected Circuits.” <i>Proceedings of the National Academy of Sciences of the United States of America</i>. National Academy of Sciences, 2020. <a href=\"https://doi.org/10.1073/pnas.1912804117\">https://doi.org/10.1073/pnas.1912804117</a>."}},{"date_updated":"2025-07-10T11:57:17Z","status":"public","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","image":"/images/cc_by_nc_nd.png","short":"CC BY-NC-ND (4.0)"},"isi":1,"volume":117,"month":"10","publication_status":"published","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","_id":"8699","oa_version":"Published Version","page":"24764-24770","quality_controlled":"1","publication":"Proceedings of the National Academy of Sciences of the United States of America","project":[{"grant_number":"754411","call_identifier":"H2020","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships"}],"language":[{"iso":"eng"}],"type":"journal_article","department":[{"_id":"MiLe"}],"ec_funded":1,"scopus_import":"1","pmid":1,"title":"Strain engineering of the charge and spin-orbital interactions in Sr2IrO4","has_accepted_license":"1","date_created":"2020-10-25T23:01:17Z","year":"2020","intvolume":"       117","external_id":{"pmid":["32958669"],"arxiv":["2009.12262"],"isi":["000579059100029"]},"publication_identifier":{"eissn":["1091-6490"],"issn":["0027-8424"]},"ddc":["530"],"file_date_updated":"2020-10-28T11:53:12Z","citation":{"ieee":"E. Paris <i>et al.</i>, “Strain engineering of the charge and spin-orbital interactions in Sr2IrO4,” <i>Proceedings of the National Academy of Sciences of the United States of America</i>, vol. 117, no. 40. National Academy of Sciences, pp. 24764–24770, 2020.","ista":"Paris E, Tseng Y, Paerschke E, Zhang W, Upton MH, Efimenko A, Rolfs K, McNally DE, Maurel L, Naamneh M, Caputo M, Strocov VN, Wang Z, Casa D, Schneider CW, Pomjakushina E, Wohlfeld K, Radovic M, Schmitt T. 2020. Strain engineering of the charge and spin-orbital interactions in Sr2IrO4. Proceedings of the National Academy of Sciences of the United States of America. 117(40), 24764–24770.","chicago":"Paris, Eugenio, Yi Tseng, Ekaterina Paerschke, Wenliang Zhang, Mary H Upton, Anna Efimenko, Katharina Rolfs, et al. “Strain Engineering of the Charge and Spin-Orbital Interactions in Sr2IrO4.” <i>Proceedings of the National Academy of Sciences of the United States of America</i>. National Academy of Sciences, 2020. <a href=\"https://doi.org/10.1073/pnas.2012043117\">https://doi.org/10.1073/pnas.2012043117</a>.","apa":"Paris, E., Tseng, Y., Paerschke, E., Zhang, W., Upton, M. H., Efimenko, A., … Schmitt, T. (2020). Strain engineering of the charge and spin-orbital interactions in Sr2IrO4. <i>Proceedings of the National Academy of Sciences of the United States of America</i>. National Academy of Sciences. <a href=\"https://doi.org/10.1073/pnas.2012043117\">https://doi.org/10.1073/pnas.2012043117</a>","short":"E. Paris, Y. Tseng, E. Paerschke, W. Zhang, M.H. Upton, A. Efimenko, K. Rolfs, D.E. McNally, L. Maurel, M. Naamneh, M. Caputo, V.N. Strocov, Z. Wang, D. Casa, C.W. Schneider, E. Pomjakushina, K. Wohlfeld, M. Radovic, T. Schmitt, Proceedings of the National Academy of Sciences of the United States of America 117 (2020) 24764–24770.","mla":"Paris, Eugenio, et al. “Strain Engineering of the Charge and Spin-Orbital Interactions in Sr2IrO4.” <i>Proceedings of the National Academy of Sciences of the United States of America</i>, vol. 117, no. 40, National Academy of Sciences, 2020, pp. 24764–70, doi:<a href=\"https://doi.org/10.1073/pnas.2012043117\">10.1073/pnas.2012043117</a>.","ama":"Paris E, Tseng Y, Paerschke E, et al. Strain engineering of the charge and spin-orbital interactions in Sr2IrO4. <i>Proceedings of the National Academy of Sciences of the United States of America</i>. 2020;117(40):24764-24770. doi:<a href=\"https://doi.org/10.1073/pnas.2012043117\">10.1073/pnas.2012043117</a>"},"publisher":"National Academy of Sciences","file":[{"date_created":"2020-10-28T11:53:12Z","file_size":1176522,"date_updated":"2020-10-28T11:53:12Z","creator":"cziletti","file_name":"2020_PNAS_Paris.pdf","success":1,"content_type":"application/pdf","relation":"main_file","checksum":"1638fa36b442e2868576c6dd7d6dc505","access_level":"open_access","file_id":"8715"}],"article_processing_charge":"No","abstract":[{"text":"In the high spin–orbit-coupled Sr2IrO4, the high sensitivity of the ground state to the details of the local lattice structure shows a large potential for the manipulation of the functional properties by inducing local lattice distortions. We use epitaxial strain to modify the Ir–O bond geometry in Sr2IrO4 and perform momentum-dependent resonant inelastic X-ray scattering (RIXS) at the metal and at the ligand sites to unveil the response of the low-energy elementary excitations. We observe that the pseudospin-wave dispersion for tensile-strained Sr2IrO4 films displays large softening along the [h,0] direction, while along the [h,h] direction it shows hardening. This evolution reveals a renormalization of the magnetic interactions caused by a strain-driven cross-over from anisotropic to isotropic interactions between the magnetic moments. Moreover, we detect dispersive electron–hole pair excitations which shift to lower (higher) energies upon compressive (tensile) strain, manifesting a reduction (increase) in the size of the charge gap. This behavior shows an intimate coupling between charge excitations and lattice distortions in Sr2IrO4, originating from the modified hopping elements between the t2g orbitals. Our work highlights the central role played by the lattice degrees of freedom in determining both the pseudospin and charge excitations of Sr2IrO4 and provides valuable information toward the control of the ground state of complex oxides in the presence of high spin–orbit coupling.","lang":"eng"}],"day":"06","date_published":"2020-10-06T00:00:00Z","author":[{"first_name":"Eugenio","full_name":"Paris, Eugenio","last_name":"Paris"},{"first_name":"Yi","full_name":"Tseng, Yi","last_name":"Tseng"},{"id":"8275014E-6063-11E9-9B7F-6338E6697425","last_name":"Paerschke","full_name":"Paerschke, Ekaterina","first_name":"Ekaterina","orcid":"0000-0003-0853-8182"},{"first_name":"Wenliang","full_name":"Zhang, Wenliang","last_name":"Zhang"},{"last_name":"Upton","first_name":"Mary H","full_name":"Upton, Mary H"},{"full_name":"Efimenko, Anna","first_name":"Anna","last_name":"Efimenko"},{"first_name":"Katharina","full_name":"Rolfs, Katharina","last_name":"Rolfs"},{"last_name":"McNally","full_name":"McNally, Daniel E","first_name":"Daniel E"},{"last_name":"Maurel","first_name":"Laura","full_name":"Maurel, Laura"},{"last_name":"Naamneh","full_name":"Naamneh, Muntaser","first_name":"Muntaser"},{"first_name":"Marco","full_name":"Caputo, Marco","last_name":"Caputo"},{"last_name":"Strocov","full_name":"Strocov, Vladimir N","first_name":"Vladimir N"},{"last_name":"Wang","first_name":"Zhiming","full_name":"Wang, Zhiming"},{"full_name":"Casa, Diego","first_name":"Diego","last_name":"Casa"},{"last_name":"Schneider","first_name":"Christof W","full_name":"Schneider, Christof W"},{"full_name":"Pomjakushina, Ekaterina","first_name":"Ekaterina","last_name":"Pomjakushina"},{"last_name":"Wohlfeld","full_name":"Wohlfeld, Krzysztof","first_name":"Krzysztof"},{"last_name":"Radovic","full_name":"Radovic, Milan","first_name":"Milan"},{"last_name":"Schmitt","full_name":"Schmitt, Thorsten","first_name":"Thorsten"}],"arxiv":1,"oa":1,"article_type":"original","acknowledgement":"We gratefully acknowledge C. Sahle for experimental support at the ID20 beamline of the ESRF. The soft X-ray experiments were carried out at the ADRESS beamline of the Swiss Light Source, Paul Scherrer Institut (PSI). E. Paris and T.S. thank X. Lu and C. Monney for valuable discussions. The work at PSI is supported by the Swiss National Science Foundation (SNSF) through Project 200021_178867, the NCCR (National Centre of Competence in Research) MARVEL (Materials’ Revolution: Computational Design and Discovery of Novel Materials) and the Sinergia network Mott Physics Beyond the Heisenberg Model (MPBH) (SNSF Research Grants CRSII2_160765/1 and CRSII2_141962). K.W. acknowledges support by the Narodowe Centrum Nauki Projects 2016/22/E/ST3/00560 and 2016/23/B/ST3/00839. E.M.P. and M.N. acknowledge funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie Grant Agreements 754411 and 701647, respectively. M.R. was supported by the Swiss National Science Foundation under Project 200021 – 182695. This research used resources of the APS, a U.S. Department of Energy (DOE) Office of Science User Facility operated for the DOE Office of Science by Argonne National Laboratory under Contract DE-AC02-06CH11357.","issue":"40","doi":"10.1073/pnas.2012043117"}]