--- OA_place: repository OA_type: green _id: '18559' abstract: - lang: eng text: We prove a 1973 conjecture due to Erdős on the existence of Steiner triple systems with arbitrarily high girth. acknowledgement: Sah and Sawhney were supported by NSF Graduate Research Fellowship Program DGE1745302. Sah was supported by the PD Soros Fellowship. Simkin was supported by the Center of Mathematical Sciences and Applications at Harvard University. article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Matthew Alan full_name: Kwan, Matthew Alan id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3 last_name: Kwan orcid: 0000-0002-4003-7567 - first_name: Ashwin full_name: Sah, Ashwin last_name: Sah - first_name: Mehtaab full_name: Sawhney, Mehtaab last_name: Sawhney - first_name: Michael full_name: Simkin, Michael last_name: Simkin citation: ama: Kwan MA, Sah A, Sawhney M, Simkin M. High-girth Steiner triple systems. Annals of Mathematics. 2024;200(3):1059-1156. doi:10.4007/annals.2024.200.3.4 apa: Kwan, M. A., Sah, A., Sawhney, M., & Simkin, M. (2024). High-girth Steiner triple systems. Annals of Mathematics. Princeton University. https://doi.org/10.4007/annals.2024.200.3.4 chicago: Kwan, Matthew Alan, Ashwin Sah, Mehtaab Sawhney, and Michael Simkin. “High-Girth Steiner Triple Systems.” Annals of Mathematics. Princeton University, 2024. https://doi.org/10.4007/annals.2024.200.3.4. ieee: M. A. Kwan, A. Sah, M. Sawhney, and M. Simkin, “High-girth Steiner triple systems,” Annals of Mathematics, vol. 200, no. 3. Princeton University, pp. 1059–1156, 2024. ista: Kwan MA, Sah A, Sawhney M, Simkin M. 2024. High-girth Steiner triple systems. Annals of Mathematics. 200(3), 1059–1156. mla: Kwan, Matthew Alan, et al. “High-Girth Steiner Triple Systems.” Annals of Mathematics, vol. 200, no. 3, Princeton University, 2024, pp. 1059–156, doi:10.4007/annals.2024.200.3.4. short: M.A. Kwan, A. Sah, M. Sawhney, M. Simkin, Annals of Mathematics 200 (2024) 1059–1156. corr_author: '1' date_created: 2024-11-17T23:01:48Z date_published: 2024-11-01T00:00:00Z date_updated: 2025-09-08T14:40:55Z day: '01' department: - _id: MaKw doi: 10.4007/annals.2024.200.3.4 external_id: arxiv: - '2201.04554' isi: - '001366233800004' intvolume: ' 200' isi: 1 issue: '3' language: - iso: eng main_file_link: - open_access: '1' url: https://doi.org/10.48550/arXiv.2201.04554 month: '11' oa: 1 oa_version: Preprint page: 1059-1156 publication: Annals of Mathematics publication_identifier: eissn: - 1939-8980 issn: - 0003-486X publication_status: published publisher: Princeton University quality_controlled: '1' scopus_import: '1' status: public title: High-girth Steiner triple systems type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 200 year: '2024' ... --- OA_type: closed access _id: '18563' abstract: - lang: eng text: I give a personal account about the wave of new research activities that rose in the 1990s on the specification, verification, and control of real-time systems. acknowledgement: I thank all my collaborators over the years. None of the mentioned contributions would have been possible without them. I also apologize for all omissions. The selection of contributions in this essay reflects primarily my personal involvement rather than any measure of importance. alternative_title: - LNCS article_processing_charge: No author: - first_name: Thomas A full_name: Henzinger, Thomas A id: 40876CD8-F248-11E8-B48F-1D18A9856A87 last_name: Henzinger orcid: 0000-0002-2985-7724 citation: ama: 'Henzinger TA. Reminiscences of a Real-Time Researcher. In: Graf S, Pettersson P, Steffen B, eds. Real Time and Such. Vol 15230. LNCS. Cham: Springer Nature; 2024:154-164. doi:10.1007/978-3-031-73751-0_12' apa: 'Henzinger, T. A. (2024). Reminiscences of a Real-Time Researcher. In S. Graf, P. Pettersson, & B. Steffen (Eds.), Real Time and Such (Vol. 15230, pp. 154–164). Cham: Springer Nature. https://doi.org/10.1007/978-3-031-73751-0_12' chicago: 'Henzinger, Thomas A. “Reminiscences of a Real-Time Researcher.” In Real Time and Such, edited by Susanne Graf, Paul Pettersson, and Bernhard Steffen, 15230:154–64. LNCS. Cham: Springer Nature, 2024. https://doi.org/10.1007/978-3-031-73751-0_12.' ieee: 'T. A. Henzinger, “Reminiscences of a Real-Time Researcher,” in Real Time and Such, vol. 15230, S. Graf, P. Pettersson, and B. Steffen, Eds. Cham: Springer Nature, 2024, pp. 154–164.' ista: 'Henzinger TA. 2024.Reminiscences of a Real-Time Researcher. In: Real Time and Such. LNCS, vol. 15230, 154–164.' mla: Henzinger, Thomas A. “Reminiscences of a Real-Time Researcher.” Real Time and Such, edited by Susanne Graf et al., vol. 15230, Springer Nature, 2024, pp. 154–64, doi:10.1007/978-3-031-73751-0_12. short: T.A. Henzinger, in:, S. Graf, P. Pettersson, B. Steffen (Eds.), Real Time and Such, Springer Nature, Cham, 2024, pp. 154–164. corr_author: '1' date_created: 2024-11-18T09:10:06Z date_published: 2024-10-23T00:00:00Z date_updated: 2025-08-05T12:19:50Z day: '23' department: - _id: ToHe doi: 10.1007/978-3-031-73751-0_12 editor: - first_name: Susanne full_name: Graf, Susanne last_name: Graf - first_name: Paul full_name: Pettersson, Paul last_name: Pettersson - first_name: Bernhard full_name: Steffen, Bernhard last_name: Steffen intvolume: ' 15230' language: - iso: eng month: '10' oa_version: None page: 154-164 place: Cham publication: Real Time and Such publication_identifier: eisbn: - '9783031737510' eissn: - 1611-3349 isbn: - '9783031737503' issn: - 0302-9743 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' series_title: LNCS status: public title: Reminiscences of a Real-Time Researcher type: book_chapter user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 15230 year: '2024' ... --- OA_place: publisher _id: '18568' abstract: - lang: eng text: "Locomotion is ubiquitous in the animal kingdom because an animal's survival depends on its ability to navigate its environment to find food, avoid predators and locate potential mates. These behaviours require control mechanisms that can extract information from the environment, particularly visual cues. Selective evolutionary pressures have thus refined such visuomotor transformations in a species-specific manner to meet the specific ecological and ethological challenges of each organism. However, a common challenge across organisms as visual information processing\r\nbecomes increasingly detailed is the mechanisms required to synthesise disparate pieces of information into a coherent percept or unified picture of the world. In this thesis, I investigate how disparate visual information is combined in the brain of Drosophila melanogaster to effectively guide locomotion.\r\nFor this, I first designed and built a behavioural setup to record locomotion and present visual stimuli to freely-walking fruit flies in a closed-loop manner. This setup allowed the investigation of innate visually-guided behaviours, including the optomotor reflex and courtship.\r\nSecond, taking advantage of my system I investigated the optomotor response, a reflexive visual stabilisation behaviour in which flies turn in the direction of global motion to minimise retinal slip. This behaviour is thought to be mediated by Lobula plate tangential cells (LPTCs); a complex network of optic-flow-sensitive neurons essential for self-motion estimation. Using a novel genetic mutant, I demonstrate that electrical coupling between two LPTC subtypes, contralateral HS and H2 neurons, regulates the balance between smooth optomotor turning and saccadic anti-optomotor responses. These findings underscore the critical role of binocular motion cue integration in guiding course control. Finally, I developed a novel behavioural paradigm in which a sexually aroused male fruit fly is presented with an optomotor distractor. This setup creates competition between two visual behaviours, courtship tracking and the optomotor response, enabling me to explore how the visual system resolves this conflict. In this setting, males\r\nengaged in courtship selectively suppress their optomotor response based on the female's location. Furthermore, when this experiment is replicated with an “artificial female”, optogenetically aroused males alternate between tracking and optomotor responses. The probability and dynamics of this switching are determined by the relative strengths of the two competing stimuli. In summary, the results presented in this thesis explore two mechanisms – integration and competition - through which visual information is combined in the brain of the fruit fly to drive locomotion." acknowledged_ssus: - _id: M-Shop acknowledgement: I am incredibly thankful for the outstanding support provided by ISTA, especially the Machine Shop team, who made conducting research much easier and more efficient. I am also grateful for the funding provided by European Union’s Horizon 2020 research and innovation program under the Marie Skłodowska-Curie programme (665385) and The German Research Foundation grant DFG (SPP2205) “Evolutionary optimization of neuronal processing”. alternative_title: - ISTA Thesis article_processing_charge: No author: - first_name: Roshan K full_name: Satapathy, Roshan K id: 46046B7A-F248-11E8-B48F-1D18A9856A87 last_name: Satapathy orcid: 0009-0006-2974-5075 citation: ama: Satapathy RK. Mechanisms of visual integration and competition in innate behaviours in Drosophila melanogaster. 2024. doi:10.15479/at:ista:18568 apa: Satapathy, R. K. (2024). Mechanisms of visual integration and competition in innate behaviours in Drosophila melanogaster. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:18568 chicago: Satapathy, Roshan K. “Mechanisms of Visual Integration and Competition in Innate Behaviours in Drosophila Melanogaster.” Institute of Science and Technology Austria, 2024. https://doi.org/10.15479/at:ista:18568. ieee: R. K. Satapathy, “Mechanisms of visual integration and competition in innate behaviours in Drosophila melanogaster,” Institute of Science and Technology Austria, 2024. ista: Satapathy RK. 2024. Mechanisms of visual integration and competition in innate behaviours in Drosophila melanogaster. Institute of Science and Technology Austria. mla: Satapathy, Roshan K. Mechanisms of Visual Integration and Competition in Innate Behaviours in Drosophila Melanogaster. Institute of Science and Technology Austria, 2024, doi:10.15479/at:ista:18568. short: R.K. Satapathy, Mechanisms of Visual Integration and Competition in Innate Behaviours in Drosophila Melanogaster, Institute of Science and Technology Austria, 2024. corr_author: '1' date_created: 2024-11-19T12:34:30Z date_published: 2024-11-20T00:00:00Z date_updated: 2026-04-07T13:00:36Z day: '20' ddc: - '573' degree_awarded: PhD department: - _id: GradSch - _id: MaJö doi: 10.15479/at:ista:18568 ec_funded: 1 file: - access_level: open_access checksum: 340f2bfe882c8a85e11ec0687ca15f5e content_type: application/pdf creator: rsatapat date_created: 2024-11-19T12:39:55Z date_updated: 2024-11-19T12:39:55Z file_id: '18570' file_name: Roshan PhD thesis-Final.pdf file_size: 10960975 relation: main_file success: 1 - access_level: closed checksum: 0f846fce60d6ea511e07f77eff59a6a1 content_type: application/vnd.openxmlformats-officedocument.wordprocessingml.document creator: rsatapat date_created: 2024-11-19T12:46:47Z date_updated: 2024-12-13T10:27:25Z file_id: '18571' file_name: Roshan PhD thesis-Final.docx file_size: 36695917 relation: source_file file_date_updated: 2024-12-13T10:27:25Z has_accepted_license: '1' language: - iso: eng license: https://creativecommons.org/licenses/by-sa/4.0/ month: '11' oa: 1 oa_version: Published Version page: '114' project: - _id: 2564DBCA-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '665385' name: International IST Doctoral Program publication_identifier: isbn: - 978-3-99078-047-3 issn: - 2663-337X publication_status: published publisher: Institute of Science and Technology Austria related_material: record: - id: '18444' relation: part_of_dissertation status: public status: public supervisor: - first_name: Maximilian A full_name: Jösch, Maximilian A id: 2BD278E6-F248-11E8-B48F-1D18A9856A87 last_name: Jösch orcid: 0000-0002-3937-1330 title: Mechanisms of visual integration and competition in innate behaviours in Drosophila melanogaster tmp: image: /images/cc_by_sa.png legal_code_url: https://creativecommons.org/licenses/by-sa/4.0/legalcode name: Creative Commons Attribution-ShareAlike 4.0 International Public License (CC BY-SA 4.0) short: CC BY-SA (4.0) type: dissertation user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd year: '2024' ... --- OA_place: publisher _id: '18579' abstract: - lang: eng text: 'Electrophysiological, calcium two-photon recordings and behavioral data for Vega-Zuniga et al. Relevant information can be found in the ''README.txt'' files. ' acknowledged_ssus: - _id: ScienComp - _id: PreCl - _id: M-Shop - _id: Bio - _id: LifeSc acknowledgement: Freyja Lange, Michael Schunn, and Todor Asenov article_processing_charge: No author: - first_name: Tomas A full_name: Vega Zuniga, Tomas A id: 2E7C4E78-F248-11E8-B48F-1D18A9856A87 last_name: Vega Zuniga - first_name: Anton L full_name: Sumser, Anton L id: 3320A096-F248-11E8-B48F-1D18A9856A87 last_name: Sumser orcid: 0000-0002-4792-1881 - first_name: Olga full_name: Symonova, Olga id: 3C0C7BC6-F248-11E8-B48F-1D18A9856A87 last_name: Symonova orcid: 0000-0003-2012-9947 - first_name: Peter full_name: Koppensteiner, Peter id: 3B8B25A8-F248-11E8-B48F-1D18A9856A87 last_name: Koppensteiner orcid: 0000-0002-3509-1948 - first_name: Florian full_name: Schmidt, Florian id: A2EF226A-AF19-11E9-924C-0525E6697425 last_name: Schmidt - first_name: Maximilian A full_name: Jösch, Maximilian A id: 2BD278E6-F248-11E8-B48F-1D18A9856A87 last_name: Jösch orcid: 0000-0002-3937-1330 citation: ama: Vega Zuniga TA, Sumser AL, Symonova O, Koppensteiner P, Schmidt F, Jösch MA. A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics. 2024. doi:10.15479/AT:ISTA:18579 apa: Vega Zuniga, T. A., Sumser, A. L., Symonova, O., Koppensteiner, P., Schmidt, F., & Jösch, M. A. (2024). A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics. Institute of Science and Technology Austria. https://doi.org/10.15479/AT:ISTA:18579 chicago: Vega Zuniga, Tomas A, Anton L Sumser, Olga Symonova, Peter Koppensteiner, Florian Schmidt, and Maximilian A Jösch. “A Thalamic Hub-and-Spoke Network Enables Visual Perception during Action by Coordinating Visuomotor Dynamics.” Institute of Science and Technology Austria, 2024. https://doi.org/10.15479/AT:ISTA:18579. ieee: T. A. Vega Zuniga, A. L. Sumser, O. Symonova, P. Koppensteiner, F. Schmidt, and M. A. Jösch, “A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics.” Institute of Science and Technology Austria, 2024. ista: Vega Zuniga TA, Sumser AL, Symonova O, Koppensteiner P, Schmidt F, Jösch MA. 2024. A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics, Institute of Science and Technology Austria, 10.15479/AT:ISTA:18579. mla: Vega Zuniga, Tomas A., et al. A Thalamic Hub-and-Spoke Network Enables Visual Perception during Action by Coordinating Visuomotor Dynamics. Institute of Science and Technology Austria, 2024, doi:10.15479/AT:ISTA:18579. short: T.A. Vega Zuniga, A.L. Sumser, O. Symonova, P. Koppensteiner, F. Schmidt, M.A. Jösch, (2024). corr_author: '1' date_created: 2024-11-22T13:48:12Z date_published: 2024-12-09T00:00:00Z date_updated: 2026-06-18T18:12:08Z day: '09' ddc: - '570' department: - _id: MaJö doi: 10.15479/AT:ISTA:18579 ec_funded: 1 file: - access_level: open_access checksum: 8b13990ca1a458ae3f3ae54c2e888564 content_type: application/x-zip-compressed creator: symonova date_created: 2024-12-06T13:28:18Z date_updated: 2024-12-09T10:24:25Z file_id: '18625' file_name: electro_physiology_data.zip file_size: 800647957 relation: main_file - access_level: open_access checksum: c5a4d71c5f29c009c3d96a3244532afa content_type: application/x-zip-compressed creator: symonova date_created: 2024-12-09T10:21:10Z date_updated: 2024-12-09T10:21:10Z file_id: '18636' file_name: NN_vLGN_Ca_data.zip file_size: 828410832 relation: main_file success: 1 - access_level: open_access checksum: 63651df0186196969553dc48b467f6ab content_type: text/plain creator: symonova date_created: 2024-12-09T12:54:55Z date_updated: 2024-12-09T12:54:55Z file_id: '18637' file_name: readme.txt file_size: 505 relation: main_file success: 1 file_date_updated: 2024-12-09T12:54:55Z has_accepted_license: '1' license: https://creativecommons.org/licenses/by/4.0/ month: '12' oa: 1 oa_version: Published Version project: - _id: 264FEA02-B435-11E9-9278-68D0E5697425 grant_number: ALTF 1098-2017 name: Connecting sensory with motor processing in the superior colliculus - _id: 266D407A-B435-11E9-9278-68D0E5697425 grant_number: LT000256 name: Neuronal networks of salience and spatial detection in the murine superior colliculus - _id: 2634E9D2-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '756502' name: Circuits of Visual Attention - _id: bdaf81a8-d553-11ed-ba76-c95961984540 grant_number: '101086580' name: 'Action Selection in the Midbrain: Neuromodulation of Visuomotor Senses' publisher: Institute of Science and Technology Austria related_material: record: - id: '19076' relation: used_in_publication status: public status: public title: A thalamic hub-and-spoke network enables visual perception during action by coordinating visuomotor dynamics tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: research_data user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18581' abstract: - lang: eng text: "Background: Human induced pluripotent stem cells represent a scalable source of youthful tissue progenitors and secretomes for regenerative therapies. The aim of our study was to investigate the potential of conditioned medium (CM) from hiPSC-mesenchymal progenitors (hiPSC-MPs) to stimulate osteogenic differentiation of human bone marrow-derived mesenchymal stromal cells (MSCs). We also investigated whether prolonged cultivation or osteogenic pre-differentiation of hiPSC-MPs could enhance the stimulatory activity of CM.\r\nMethods: MSCs were isolated from 13 donors (age 20–90 years). CM derived from hiPSC-MPs was added to the MSC cultures and the effects on proliferation and osteogenic differentiation were examined after 14 days and 6 weeks. The stimulatory activity of hiPSC-MP-CM was compared with the activity of MSC-derived CM and with the activity of CM prepared from hiPSC-MPs pre-cultured in growth or osteogenic medium for 14 days. Comparative proteomic analysis of CM was performed to gain insight into the molecular components responsible for the stimulatory activity.\r\nResults: Primary bone marrow-derived MSC exhibited variability, with a tendency towards lower proliferation and tri-lineage differentiation in older donors. hiPSC-MP-CM increased the proliferation and alkaline phosphatase activity of MSC from several adult/aged donors after 14 days of continuous supplementation under osteogenic conditions. However, CM supplementation failed to improve the mineralization of MSC pellets after 6 weeks under osteogenic conditions. hiPSC-MP-CM showed greater enhancement of proliferation and ALP activity than CM derived from bone marrow-derived MSCs. Moreover, 14-day cultivation but not osteogenic pre-differentiation of hiPSC-MPs strongly enhanced CM stimulatory activity. Quantitative proteomic analysis of d14-CM revealed a distinct profile of components that formed a highly interconnected associations network with two clusters, one functionally associated with binding and organization of actin/cytoskeletal components and the other with structural constituents of the extracellular matrix, collagen, and growth factor binding. Several hub proteins were identified that were reported to have functions in cell-extracellular matrix interaction, osteogenic differentiation and development.\r\nConclusions: Our data show that hiPSC-MP-CM enhances early osteogenic differentiation of human bone marrow-derived MSCs and that prolonged cultivation of hiPSC-MPs enhances CM-stimulatory activity. Proteomic analysis of the upregulated protein components provides the basis for further optimization of hiPSC-MP-CM for bone regenerative therapies." acknowledgement: "We thank the personnel of the Lorenz-Böhler-Unfallkrankenhaus for providing the human tissue waste for primary cell isolation and the New York Stem Cell Foundation Research Institute for providing the human induced pluripotent stem cell line 1013 A and its mesenchymal progenitors. We also thank all our colleagues at the Ludwig Boltzmann Institute for Traumatology for their suggestions and ongoing support of the project. InstaText writing tool (https://instatext.io) was used to edit the English language of the final manuscript.\r\nThis work has received funding from the European Union’s Horizon 2020 research and innovation program under the Marie Sklodowska-Curie actions (grant agreement No. 657716) and the Transforming European Industry call H2020-NMBP-TRIND-2020 (grant agreement No. 953134), as well as by the FFG Industrienahe Dissertation program (grant agreement No. 867803 and 853056), the FEMtech Praktika program (grant agreement No. 852154, 868917 and 877951) and the Production of the Future program (grant agreement No. 877452)." article_number: '434' article_processing_charge: Yes article_type: original author: - first_name: Darja full_name: Marolt Presen, Darja last_name: Marolt Presen - first_name: Vanessa full_name: Goeschl, Vanessa last_name: Goeschl - first_name: Dominik full_name: Hanetseder, Dominik last_name: Hanetseder - first_name: Laura full_name: Ogrin, Laura last_name: Ogrin - first_name: Alexandra Larissa full_name: Stetco, Alexandra Larissa last_name: Stetco - first_name: Anja full_name: Tansek, Anja last_name: Tansek - first_name: Laura full_name: Pozenel, Laura last_name: Pozenel - first_name: Bella full_name: Bruszel, Bella id: 70abbbb3-88ea-11ec-8e0a-e8c939944834 last_name: Bruszel - first_name: Goran full_name: Mitulovic, Goran last_name: Mitulovic - first_name: Johannes full_name: Oesterreicher, Johannes last_name: Oesterreicher - first_name: Johannes full_name: Zipperle, Johannes last_name: Zipperle - first_name: Barbara full_name: Schaedl, Barbara last_name: Schaedl - first_name: Wolfgang full_name: Holnthoner, Wolfgang last_name: Holnthoner - first_name: Johannes full_name: Grillari, Johannes last_name: Grillari - first_name: Heinz full_name: Redl, Heinz last_name: Redl citation: ama: Marolt Presen D, Goeschl V, Hanetseder D, et al. Prolonged cultivation enhances the stimulatory activity of hiPSC mesenchymal progenitor-derived conditioned medium. Stem Cell Research and Therapy. 2024;15. doi:10.1186/s13287-024-03960-5 apa: Marolt Presen, D., Goeschl, V., Hanetseder, D., Ogrin, L., Stetco, A. L., Tansek, A., … Redl, H. (2024). Prolonged cultivation enhances the stimulatory activity of hiPSC mesenchymal progenitor-derived conditioned medium. Stem Cell Research and Therapy. Springer Nature. https://doi.org/10.1186/s13287-024-03960-5 chicago: Marolt Presen, Darja, Vanessa Goeschl, Dominik Hanetseder, Laura Ogrin, Alexandra Larissa Stetco, Anja Tansek, Laura Pozenel, et al. “Prolonged Cultivation Enhances the Stimulatory Activity of HiPSC Mesenchymal Progenitor-Derived Conditioned Medium.” Stem Cell Research and Therapy. Springer Nature, 2024. https://doi.org/10.1186/s13287-024-03960-5. ieee: D. Marolt Presen et al., “Prolonged cultivation enhances the stimulatory activity of hiPSC mesenchymal progenitor-derived conditioned medium,” Stem Cell Research and Therapy, vol. 15. Springer Nature, 2024. ista: Marolt Presen D, Goeschl V, Hanetseder D, Ogrin L, Stetco AL, Tansek A, Pozenel L, Bruszel B, Mitulovic G, Oesterreicher J, Zipperle J, Schaedl B, Holnthoner W, Grillari J, Redl H. 2024. Prolonged cultivation enhances the stimulatory activity of hiPSC mesenchymal progenitor-derived conditioned medium. Stem Cell Research and Therapy. 15, 434. mla: Marolt Presen, Darja, et al. “Prolonged Cultivation Enhances the Stimulatory Activity of HiPSC Mesenchymal Progenitor-Derived Conditioned Medium.” Stem Cell Research and Therapy, vol. 15, 434, Springer Nature, 2024, doi:10.1186/s13287-024-03960-5. short: D. Marolt Presen, V. Goeschl, D. Hanetseder, L. Ogrin, A.L. Stetco, A. Tansek, L. Pozenel, B. Bruszel, G. Mitulovic, J. Oesterreicher, J. Zipperle, B. Schaedl, W. Holnthoner, J. Grillari, H. Redl, Stem Cell Research and Therapy 15 (2024). date_created: 2024-11-24T23:01:47Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-09-09T11:41:12Z day: '01' ddc: - '570' department: - _id: LifeSc doi: 10.1186/s13287-024-03960-5 external_id: isi: - '001356479400001' pmid: - '39551765' file: - access_level: open_access checksum: 91edba8edde30d781dce89fdd5cadc39 content_type: application/pdf creator: dernst date_created: 2024-12-10T08:28:17Z date_updated: 2024-12-10T08:28:17Z file_id: '18641' file_name: 2024_StemCellResearch_Presen.pdf file_size: 6690494 relation: main_file success: 1 file_date_updated: 2024-12-10T08:28:17Z has_accepted_license: '1' intvolume: ' 15' isi: 1 language: - iso: eng license: https://creativecommons.org/licenses/by-nc-nd/4.0/ month: '12' oa: 1 oa_version: Published Version pmid: 1 publication: Stem Cell Research and Therapy publication_identifier: eissn: - 1757-6512 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Prolonged cultivation enhances the stimulatory activity of hiPSC mesenchymal progenitor-derived conditioned medium tmp: image: /images/cc_by_nc_nd.png legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) short: CC BY-NC-ND (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 15 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18582' abstract: - lang: eng text: Identification of PIN exporters for auxin, the major coordinative signal in plants, some 25 years ago, signifies a landmark in our understanding of plant-specific mechanisms underlying development and adaptation. Auxin is directionally transported throughout the plant body; a unique feature already envisioned by Darwin and solidified by PINs’ discovery and characterization. The PIN-based auxin distribution network with its complex regulations of PIN expression, localization and activity turned out to underlie a remarkable multitude of developmental processes and represents means to integrate endogenous and environmental signals. Given the recent anniversary, we here summarize past and current developments in this exciting field. acknowledgement: We gratefully acknowledge Leo Gälweiler for authorizing his PIN1 story. We would like to thank Yuanrong Pei for invaluable help with preparing figures. Work in the lab of C.L. is supported by grants from the Austrian Science Fund (PAT 8419423) and by the Gesellschaft für Forschungsförderung Niederösterreich m.b.H. (FTI19-008). The lab of J.F. is supported by the Austrian Science Fund (I 6123-B and P 37051-B). article_number: '9904' article_processing_charge: Yes article_type: original author: - first_name: Christian full_name: Luschnig, Christian last_name: Luschnig - first_name: Jiří full_name: Friml, Jiří id: 4159519E-F248-11E8-B48F-1D18A9856A87 last_name: Friml orcid: 0000-0002-8302-7596 citation: ama: Luschnig C, Friml J. Over 25 years of decrypting PIN-mediated plant development. Nature Communications. 2024;15. doi:10.1038/s41467-024-54240-y apa: Luschnig, C., & Friml, J. (2024). Over 25 years of decrypting PIN-mediated plant development. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-024-54240-y chicago: Luschnig, Christian, and Jiří Friml. “Over 25 Years of Decrypting PIN-Mediated Plant Development.” Nature Communications. Springer Nature, 2024. https://doi.org/10.1038/s41467-024-54240-y. ieee: C. Luschnig and J. Friml, “Over 25 years of decrypting PIN-mediated plant development,” Nature Communications, vol. 15. Springer Nature, 2024. ista: Luschnig C, Friml J. 2024. Over 25 years of decrypting PIN-mediated plant development. Nature Communications. 15, 9904. mla: Luschnig, Christian, and Jiří Friml. “Over 25 Years of Decrypting PIN-Mediated Plant Development.” Nature Communications, vol. 15, 9904, Springer Nature, 2024, doi:10.1038/s41467-024-54240-y. short: C. Luschnig, J. Friml, Nature Communications 15 (2024). corr_author: '1' date_created: 2024-11-24T23:01:48Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-09-08T14:53:48Z day: '01' ddc: - '580' department: - _id: JiFr doi: 10.1038/s41467-024-54240-y external_id: isi: - '001356232600004' pmid: - '39548100' file: - access_level: open_access checksum: 3a31af06f52100d287f1e9d9c2aa1d40 content_type: application/pdf creator: dernst date_created: 2024-12-03T14:10:54Z date_updated: 2024-12-03T14:10:54Z file_id: '18615' file_name: 2024_NatureComm_Luschnig.pdf file_size: 1426555 relation: main_file success: 1 file_date_updated: 2024-12-03T14:10:54Z has_accepted_license: '1' intvolume: ' 15' isi: 1 language: - iso: eng month: '12' oa: 1 oa_version: Published Version pmid: 1 project: - _id: bd76d395-d553-11ed-ba76-f678c14f9033 grant_number: I06123 name: Peptide receptors for auxin canalization in Arabidopsis - _id: 7bcece63-9f16-11ee-852c-ae94e099eeb6 grant_number: P37051 name: Guanylate cyclase activity of TIR1/AFBs auxin receptors publication: Nature Communications publication_identifier: eissn: - 2041-1723 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Over 25 years of decrypting PIN-mediated plant development tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 15 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '18583' abstract: - lang: eng text: "There are a number of well-known problems and conjectures about partitioning graphs to satisfy local constraints. For example, the majority colouring conjecture of Kreutzer, Oum, Seymour, van der Zypen and Wood states that every directed graph has a 3-colouring such that for every vertex v, at most half of the out-neighbours of v have the same colour as \r\n. As another example, the internal partition conjecture, due to DeVos and to Ban and Linial, states that for every d, all but finitely many d-regular graphs have a partition into two non-empty parts such that for every vertex v, at least half of the neighbours of v lie in the same part as v. We prove several results in this spirit: in particular, two of our results are that the majority colouring conjecture holds for Erdős–Rényi random directed graphs (of any density), and that the internal partition conjecture holds if we permit a tiny number of ‘exceptional vertices’. Our proofs involve a variety of techniques, including several different methods to analyse random recolouring processes. One highlight is a personality-changing scheme: we ‘forget’ certain information based on the state of a Markov chain, giving us more independence to work with." acknowledgement: "We are grateful to the anonymous referees for their thorough reading of the paper, and for many suggestions which have improved the exposition throughout.\r\n\r\nMichael Anastos was supported by the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement No. 101034413. Matthew Kwan was supported by ERC Starting Grant ‘RANDSTRUCT’ No. 101076777, also funded by the European Union image. Mihyun Kang was supported in part by the Austrian Science Fund (FWF) [10.55776/I6502]. For the purpose of open access, the authors have applied a CC-BY public copyright licence to any Author Accepted Manuscript version arising from this submission." article_number: e70010 article_processing_charge: Yes (via OA deal) article_type: original arxiv: 1 author: - first_name: Michael full_name: Anastos, Michael id: 0b2a4358-bb35-11ec-b7b9-e3279b593dbb last_name: Anastos - first_name: Oliver full_name: Cooley, Oliver id: 43f4ddd0-a46b-11ec-8df6-ef3703bd721d last_name: Cooley - first_name: Mihyun full_name: Kang, Mihyun last_name: Kang - first_name: Matthew Alan full_name: Kwan, Matthew Alan id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3 last_name: Kwan orcid: 0000-0002-4003-7567 citation: ama: Anastos M, Cooley O, Kang M, Kwan MA. Partitioning problems via random processes. Journal of the London Mathematical Society. 2024;110(6). doi:10.1112/jlms.70010 apa: Anastos, M., Cooley, O., Kang, M., & Kwan, M. A. (2024). Partitioning problems via random processes. Journal of the London Mathematical Society. Wiley. https://doi.org/10.1112/jlms.70010 chicago: Anastos, Michael, Oliver Cooley, Mihyun Kang, and Matthew Alan Kwan. “Partitioning Problems via Random Processes.” Journal of the London Mathematical Society. Wiley, 2024. https://doi.org/10.1112/jlms.70010. ieee: M. Anastos, O. Cooley, M. Kang, and M. A. Kwan, “Partitioning problems via random processes,” Journal of the London Mathematical Society, vol. 110, no. 6. Wiley, 2024. ista: Anastos M, Cooley O, Kang M, Kwan MA. 2024. Partitioning problems via random processes. Journal of the London Mathematical Society. 110(6), e70010. mla: Anastos, Michael, et al. “Partitioning Problems via Random Processes.” Journal of the London Mathematical Society, vol. 110, no. 6, e70010, Wiley, 2024, doi:10.1112/jlms.70010. short: M. Anastos, O. Cooley, M. Kang, M.A. Kwan, Journal of the London Mathematical Society 110 (2024). corr_author: '1' date_created: 2024-11-24T23:01:48Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-12-02T13:52:26Z day: '01' ddc: - '510' department: - _id: MaKw doi: 10.1112/jlms.70010 ec_funded: 1 external_id: arxiv: - '2307.06453' isi: - '001374738100001' file: - access_level: open_access checksum: 98e301e0565d75e3fb50e10e982a5018 content_type: application/pdf creator: dernst date_created: 2024-12-10T08:10:39Z date_updated: 2024-12-10T08:10:39Z file_id: '18639' file_name: 2024_JournLondonMathSoc_Anastos.pdf file_size: 539891 relation: main_file success: 1 file_date_updated: 2024-12-10T08:10:39Z has_accepted_license: '1' intvolume: ' 110' isi: 1 issue: '6' language: - iso: eng month: '12' oa: 1 oa_version: Published Version project: - _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c call_identifier: H2020 grant_number: '101034413' name: 'IST-BRIDGE: International postdoctoral program' - _id: bd95085b-d553-11ed-ba76-e55d3349be45 grant_number: '101076777' name: Randomness and structure in combinatorics publication: Journal of the London Mathematical Society publication_identifier: eissn: - 1469-7750 issn: - 0024-6107 publication_status: published publisher: Wiley quality_controlled: '1' scopus_import: '1' status: public title: Partitioning problems via random processes tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 110 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18584' abstract: - lang: eng text: In this paper, we describe the "Medium Bands, Mega Science" JWST Cycle 2 survey (JWST-GO-4111) and demonstrate the power of these data to reveal both the spatially integrated and spatially resolved properties of galaxies from the local Universe to the era of cosmic dawn. Executed in 2023 November, MegaScience obtained ∼30 arcmin2 of deep multiband NIRCam imaging centered on the z ∼ 0.3 A2744 cluster, including 11 medium-band filters and the two shortest-wavelength broadband filters, F070W and F090W. Together, MegaScience and the UNCOVER Cycle 1 treasury program provide a complete set of deep (∼28–30 magAB) images in all NIRCam medium- and broadband filters. This unique data set allows us to precisely constrain photometric redshifts, map stellar populations and dust attenuation for large samples of distant galaxies, and examine the connection between galaxy structures and formation histories. MegaScience also includes ∼17 arcmin2 of NIRISS parallel imaging in two broadband and four medium-band filters from 0.9 to 4.8 μm, expanding the footprint where robust spectral energy distribution (SED) fitting is possible. We provide example SEDs and multiband cutouts at a variety of redshifts, and use a catalog of JWST spectroscopic redshifts to show that MegaScience improves both the scatter and catastrophic outlier rate of photometric redshifts by factors of 2–3. Additionally, we demonstrate the spatially resolved science enabled by MegaScience by presenting maps of the [O iii] line emission and continuum emission in three spectroscopically confirmed z > 6 galaxies. We show that line emission in reionization-era galaxies can be clumpy, extended, and spatially offset from continuum emission, implying that galaxy assembly histories are complex even at these early epochs. We publicly release fully reduced mosaics and photometric catalogs for both the NIRCam primary and NIRISS parallel fields (jwst-uncover.github.io/megascience). acknowledgement: "K.A.S. thanks Shelly Meyett, the MegaScience Program Coordinator, for invaluable assistance designing WOPR 88967 and ensuring that this program was fully observed. This proposal was conceived of and developed at the International Space Science Institute (ISSI) in Bern, through ISSI International Team project #562. This work is based on observations made with the NASA/ESA/CSA James Webb Space Telescope. The raw data were obtained from the Mikulski Archive for Space Telescopes at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. These observations are associated with JWST Cycle 2 GO program #4111, and this project has gratefully made use of a large number of public JWST programs in the A2744 field including JWST-GO-2641, JWST-ERS-1324, JWST-DD-2756, JWST-GO-2883, JWST-GO-3538, and JWST-GO-3516. Support for program JWST-GO-4111 was provided by NASA through a grant from the Space Telescope Science Institute, which is operated by the Associations of Universities for Research in Astronomy, Incorporated, under NASA contract NAS5-26555.\r\n\r\nThe Cosmic Dawn Center is funded by the Danish National Research Foundation (DNRF) under grant #140. P.D. acknowledges support from the NWO grant 016.VIDI.189.162 (\"ODIN\") and warmly thanks the European Commission's and University of Groningen's CO-FUND Rosalind Franklin program. This work has received funding from the Swiss State Secretariat for Education, Research and Innovation (SERI) under contract number MB22.00072, as well as from the Swiss National Science Foundation (SNSF) through project grant 200020_207349. The work of C.C.W. is supported by NOIRLab, which is managed by the Association of Universities for Research in Astronomy (AURA) under a cooperative agreement with the National Science Foundation. T.B.M. was supported by a CIERA Fellowship. H.A. is supported by CNES, focused on the JWST mission, and by the Programme National Cosmology and Galaxies (PNCG) of CNRS/INSU with INP and IN2P3, co-funded by CEA and CNES. The BGU lensing group acknowledges support by grant No. 2020750 from the United States–Israel Binational Science Foundation (BSF) and grant No. 2109066 from the United States National Science Foundation (NSF); by the Ministry of Science & Technology, Israel; and by the Israel Science Foundation grant No. 864/23. Y.F. acknowledges support from JSPS KAKENHI grant No. JP22K21349 and JP23K13149. R.P. and D.M. acknowledge funding from JWST-GO-02561.013 and JWST-GO-04111.035." article_number: '101' article_processing_charge: Yes article_type: original arxiv: 1 author: - first_name: Katherine A. full_name: Suess, Katherine A. last_name: Suess - first_name: John R. full_name: Weaver, John R. last_name: Weaver - first_name: Sedona H. full_name: Price, Sedona H. last_name: Price - first_name: Richard full_name: Pan, Richard last_name: Pan - first_name: Bingjie full_name: Wang, Bingjie last_name: Wang - first_name: Rachel full_name: Bezanson, Rachel last_name: Bezanson - first_name: Gabriel full_name: Brammer, Gabriel last_name: Brammer - first_name: Sam E. full_name: Cutler, Sam E. last_name: Cutler - first_name: Ivo full_name: Labbé, Ivo last_name: Labbé - first_name: Joel full_name: Leja, Joel last_name: Leja - first_name: Christina C. full_name: Williams, Christina C. last_name: Williams - first_name: Katherine E. full_name: Whitaker, Katherine E. last_name: Whitaker - first_name: Hakim full_name: Atek, Hakim last_name: Atek - first_name: Pratika full_name: Dayal, Pratika last_name: Dayal - first_name: Anna full_name: De Graaff, Anna last_name: De Graaff - first_name: Robert full_name: Feldmann, Robert last_name: Feldmann - first_name: Marijn full_name: Franx, Marijn last_name: Franx - first_name: Yoshinobu full_name: Fudamoto, Yoshinobu last_name: Fudamoto - first_name: Seiji full_name: Fujimoto, Seiji last_name: Fujimoto - first_name: Lukas J. full_name: Furtak, Lukas J. last_name: Furtak - first_name: Andy D. full_name: Goulding, Andy D. last_name: Goulding - first_name: Jenny E. full_name: Greene, Jenny E. last_name: Greene - first_name: Gourav full_name: Khullar, Gourav last_name: Khullar - first_name: Vasily full_name: Kokorev, Vasily last_name: Kokorev - first_name: Mariska full_name: Kriek, Mariska last_name: Kriek - first_name: Brian full_name: Lorenz, Brian last_name: Lorenz - first_name: Danilo full_name: Marchesini, Danilo last_name: Marchesini - first_name: Michael V. full_name: Maseda, Michael V. last_name: Maseda - first_name: Jorryt J full_name: Matthee, Jorryt J id: 7439a258-f3c0-11ec-9501-9df22fe06720 last_name: Matthee orcid: 0000-0003-2871-127X - first_name: Tim B. full_name: Miller, Tim B. last_name: Miller - first_name: Ikki full_name: Mitsuhashi, Ikki last_name: Mitsuhashi - first_name: Lamiya A. full_name: Mowla, Lamiya A. last_name: Mowla - first_name: Adam full_name: Muzzin, Adam last_name: Muzzin - first_name: Rohan P. full_name: Naidu, Rohan P. last_name: Naidu - first_name: Themiya full_name: Nanayakkara, Themiya last_name: Nanayakkara - first_name: Erica J. full_name: Nelson, Erica J. last_name: Nelson - first_name: Pascal A. full_name: Oesch, Pascal A. last_name: Oesch - first_name: David J. full_name: Setton, David J. last_name: Setton - first_name: Heath full_name: Shipley, Heath last_name: Shipley - first_name: Renske full_name: Smit, Renske last_name: Smit - first_name: Justin S. full_name: Spilker, Justin S. last_name: Spilker - first_name: Pieter full_name: Van Dokkum, Pieter last_name: Van Dokkum - first_name: Adi full_name: Zitrin, Adi last_name: Zitrin citation: ama: 'Suess KA, Weaver JR, Price SH, et al. Medium bands, mega science: A JWST/NIRCam medium-band imaging survey of A2744. Astrophysical Journal. 2024;976(1). doi:10.3847/1538-4357/ad75fe' apa: 'Suess, K. A., Weaver, J. R., Price, S. H., Pan, R., Wang, B., Bezanson, R., … Zitrin, A. (2024). Medium bands, mega science: A JWST/NIRCam medium-band imaging survey of A2744. Astrophysical Journal. IOP Publishing. https://doi.org/10.3847/1538-4357/ad75fe' chicago: 'Suess, Katherine A., John R. Weaver, Sedona H. Price, Richard Pan, Bingjie Wang, Rachel Bezanson, Gabriel Brammer, et al. “Medium Bands, Mega Science: A JWST/NIRCam Medium-Band Imaging Survey of A2744.” Astrophysical Journal. IOP Publishing, 2024. https://doi.org/10.3847/1538-4357/ad75fe.' ieee: 'K. A. Suess et al., “Medium bands, mega science: A JWST/NIRCam medium-band imaging survey of A2744,” Astrophysical Journal, vol. 976, no. 1. IOP Publishing, 2024.' ista: 'Suess KA, Weaver JR, Price SH, Pan R, Wang B, Bezanson R, Brammer G, Cutler SE, Labbé I, Leja J, Williams CC, Whitaker KE, Atek H, Dayal P, De Graaff A, Feldmann R, Franx M, Fudamoto Y, Fujimoto S, Furtak LJ, Goulding AD, Greene JE, Khullar G, Kokorev V, Kriek M, Lorenz B, Marchesini D, Maseda MV, Matthee JJ, Miller TB, Mitsuhashi I, Mowla LA, Muzzin A, Naidu RP, Nanayakkara T, Nelson EJ, Oesch PA, Setton DJ, Shipley H, Smit R, Spilker JS, Van Dokkum P, Zitrin A. 2024. Medium bands, mega science: A JWST/NIRCam medium-band imaging survey of A2744. Astrophysical Journal. 976(1), 101.' mla: 'Suess, Katherine A., et al. “Medium Bands, Mega Science: A JWST/NIRCam Medium-Band Imaging Survey of A2744.” Astrophysical Journal, vol. 976, no. 1, 101, IOP Publishing, 2024, doi:10.3847/1538-4357/ad75fe.' short: K.A. Suess, J.R. Weaver, S.H. Price, R. Pan, B. Wang, R. Bezanson, G. Brammer, S.E. Cutler, I. Labbé, J. Leja, C.C. Williams, K.E. Whitaker, H. Atek, P. Dayal, A. De Graaff, R. Feldmann, M. Franx, Y. Fudamoto, S. Fujimoto, L.J. Furtak, A.D. Goulding, J.E. Greene, G. Khullar, V. Kokorev, M. Kriek, B. Lorenz, D. Marchesini, M.V. Maseda, J.J. Matthee, T.B. Miller, I. Mitsuhashi, L.A. Mowla, A. Muzzin, R.P. Naidu, T. Nanayakkara, E.J. Nelson, P.A. Oesch, D.J. Setton, H. Shipley, R. Smit, J.S. Spilker, P. Van Dokkum, A. Zitrin, Astrophysical Journal 976 (2024). date_created: 2024-11-24T23:01:48Z date_published: 2024-11-14T00:00:00Z date_updated: 2025-09-09T11:40:09Z day: '14' ddc: - '520' department: - _id: JoMa doi: 10.3847/1538-4357/ad75fe external_id: arxiv: - '2404.13132' isi: - '001355710500001' file: - access_level: open_access checksum: dcd854acee73ce998d70a4ce634ead6d content_type: application/pdf creator: dernst date_created: 2024-12-10T08:18:53Z date_updated: 2024-12-10T08:18:53Z file_id: '18640' file_name: 2024_AstrophysicalJournal_Suess.pdf file_size: 13352667 relation: main_file success: 1 file_date_updated: 2024-12-10T08:18:53Z has_accepted_license: '1' intvolume: ' 976' isi: 1 issue: '1' language: - iso: eng month: '11' oa: 1 oa_version: Published Version publication: Astrophysical Journal publication_identifier: eissn: - 1538-4357 issn: - 0004-637X publication_status: published publisher: IOP Publishing quality_controlled: '1' scopus_import: '1' status: public title: 'Medium bands, mega science: A JWST/NIRCam medium-band imaging survey of A2744' tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 976 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18585' abstract: - lang: eng text: We present the census of Hβ+[OIII] 4960,5008 Åemitters at 6.87 galaxies. We report a rapid decline of the [OIII] luminosity density at z≳6−7 which cannot be explained by the evolution of the cosmic star-formation rate density. Finally we find that FRESCO detects in only 2h galaxies likely accounting for ∼10−20% of the ionising budget at z=7−8 (assuming an escape fraction of 10%), raising the prospect of directly detecting a significant fraction of the sources of reionisation with JWST. acknowledgement: "The authors thank the anonymous referee for comments and suggestions which improved this paper. RAM thanks R. Kannan for sharing emission line luminosities from THESAN and H. Katz for similar data from an early version of the SPHINX20 data release (we use the final data release in this paper). The authors thank the CONGRESS team for proposing and designing their program with a zero exclusive access period.\r\nRAM, PA, ACP, and AW acknowledge support from the Swiss National Science Foundation (SNSF) through project grant 200020_207349. PA, AW, EG, and MX acknowledge support from the Swiss State Secretariat for Education, Research and Innovation (SERI) under contract number MB22.00072. YF acknowledges support by JSPS KAKENHI grant number JP22K21349 and JP23K13149. RPN acknowledges support for this work provided by NASA through the NASA Hubble Fellowship grant HST-HF2-51515.001-A awarded by the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Incorporated, under NASA contract NAS5-26555. MS acknowledges support from the European Research Commission Grant 101088789 (SFEER), from the CIDEGENT/2021/059 grant by Generalitat Valenciana, and from project PID2019-109592GB-I00/AEI/10.13039/501100011033 by the Spanish Ministerio de Ciencia e Innovación - Agencia Estatal de Investigación. The Cosmic Dawn Center (DAWN) is funded by the Danish National Research Foundation under grant no. 140. Cloud-based data processing and file storage for this work is provided by the AWS Cloud Credits for Research program. RJB and MS acknowledges support from NWO grant TOP1.16.057.\r\nThis work is based on observations made with the NASA/ESA/CSA JWST. The raw data were obtained from the Mikulski Archive for Space Telescopes at the Space Telescope Science Institute, which is operated by the Association of Universities for Research in Astronomy, Inc., under NASA contract NAS 5-03127 for JWST. These observations are associated with JWST Cycle 1 GO program #1895. Support for program JWST-GO-1895 was provided by NASA through a grant from the Space Telescope Science Institute, which is operated by the Associations of Universities for Research in Astronomy, Incorporated, under NASA contract NAS5-26555." article_processing_charge: Yes article_type: original author: - first_name: R. A. full_name: Meyer, R. A. last_name: Meyer - first_name: P. A. full_name: Oesch, P. A. last_name: Oesch - first_name: E. full_name: Giovinazzo, E. last_name: Giovinazzo - first_name: A. full_name: Weibel, A. last_name: Weibel - first_name: G. full_name: Brammer, G. last_name: Brammer - first_name: Jorryt J full_name: Matthee, Jorryt J id: 7439a258-f3c0-11ec-9501-9df22fe06720 last_name: Matthee orcid: 0000-0003-2871-127X - first_name: R. P. full_name: Naidu, R. P. last_name: Naidu - first_name: R. J. full_name: Bouwens, R. J. last_name: Bouwens - first_name: J. full_name: Chisholm, J. last_name: Chisholm - first_name: A. full_name: Covelo-Paz, A. last_name: Covelo-Paz - first_name: Y. full_name: Fudamoto, Y. last_name: Fudamoto - first_name: M. full_name: Maseda, M. last_name: Maseda - first_name: E. full_name: Nelson, E. last_name: Nelson - first_name: I. full_name: Shivaei, I. last_name: Shivaei - first_name: M. full_name: Xiao, M. last_name: Xiao - first_name: T. full_name: Herard-Demanche, T. last_name: Herard-Demanche - first_name: G. D. full_name: Illingworth, G. D. last_name: Illingworth - first_name: J. full_name: Kerutt, J. last_name: Kerutt - first_name: Ivan full_name: Kramarenko, Ivan id: 9a9394cb-3200-11ee-973b-f5ba2a8b16e4 last_name: Kramarenko orcid: 0000-0001-5346-6048 - first_name: I. full_name: Labbe, I. last_name: Labbe - first_name: E. full_name: Leonova, E. last_name: Leonova - first_name: D. full_name: Magee, D. last_name: Magee - first_name: J. full_name: Matharu, J. last_name: Matharu - first_name: G. full_name: Prieto Lyon, G. last_name: Prieto Lyon - first_name: N. full_name: Reddy, N. last_name: Reddy - first_name: D. full_name: Schaerer, D. last_name: Schaerer - first_name: A. full_name: Shapley, A. last_name: Shapley - first_name: M. full_name: Stefanon, M. last_name: Stefanon - first_name: M. A. full_name: Wozniak, M. A. last_name: Wozniak - first_name: S. full_name: Wuyts, S. last_name: Wuyts citation: ama: 'Meyer RA, Oesch PA, Giovinazzo E, et al. JWST FRESCO: A comprehensive census of H β + [O iii] emitters at 6.8 < z < 9.0 in the GOODS fields. Monthly Notices of the Royal Astronomical Society. 2024;535(1):1067-1094. doi:10.1093/mnras/stae2353' apa: 'Meyer, R. A., Oesch, P. A., Giovinazzo, E., Weibel, A., Brammer, G., Matthee, J. J., … Wuyts, S. (2024). JWST FRESCO: A comprehensive census of H β + [O iii] emitters at 6.8 < z < 9.0 in the GOODS fields. Monthly Notices of the Royal Astronomical Society. Oxford University Press. https://doi.org/10.1093/mnras/stae2353' chicago: 'Meyer, R. A., P. A. Oesch, E. Giovinazzo, A. Weibel, G. Brammer, Jorryt J Matthee, R. P. Naidu, et al. “JWST FRESCO: A Comprehensive Census of H β + [O Iii] Emitters at 6.8 < z < 9.0 in the GOODS Fields.” Monthly Notices of the Royal Astronomical Society. Oxford University Press, 2024. https://doi.org/10.1093/mnras/stae2353.' ieee: 'R. A. Meyer et al., “JWST FRESCO: A comprehensive census of H β + [O iii] emitters at 6.8 < z < 9.0 in the GOODS fields,” Monthly Notices of the Royal Astronomical Society, vol. 535, no. 1. Oxford University Press, pp. 1067–1094, 2024.' ista: 'Meyer RA, Oesch PA, Giovinazzo E, Weibel A, Brammer G, Matthee JJ, Naidu RP, Bouwens RJ, Chisholm J, Covelo-Paz A, Fudamoto Y, Maseda M, Nelson E, Shivaei I, Xiao M, Herard-Demanche T, Illingworth GD, Kerutt J, Kramarenko I, Labbe I, Leonova E, Magee D, Matharu J, Prieto Lyon G, Reddy N, Schaerer D, Shapley A, Stefanon M, Wozniak MA, Wuyts S. 2024. JWST FRESCO: A comprehensive census of H β + [O iii] emitters at 6.8 < z < 9.0 in the GOODS fields. Monthly Notices of the Royal Astronomical Society. 535(1), 1067–1094.' mla: 'Meyer, R. A., et al. “JWST FRESCO: A Comprehensive Census of H β + [O Iii] Emitters at 6.8 < z < 9.0 in the GOODS Fields.” Monthly Notices of the Royal Astronomical Society, vol. 535, no. 1, Oxford University Press, 2024, pp. 1067–94, doi:10.1093/mnras/stae2353.' short: R.A. Meyer, P.A. Oesch, E. Giovinazzo, A. Weibel, G. Brammer, J.J. Matthee, R.P. Naidu, R.J. Bouwens, J. Chisholm, A. Covelo-Paz, Y. Fudamoto, M. Maseda, E. Nelson, I. Shivaei, M. Xiao, T. Herard-Demanche, G.D. Illingworth, J. Kerutt, I. Kramarenko, I. Labbe, E. Leonova, D. Magee, J. Matharu, G. Prieto Lyon, N. Reddy, D. Schaerer, A. Shapley, M. Stefanon, M.A. Wozniak, S. Wuyts, Monthly Notices of the Royal Astronomical Society 535 (2024) 1067–1094. date_created: 2024-11-24T23:01:49Z date_published: 2024-11-01T00:00:00Z date_updated: 2025-09-08T14:47:58Z day: '01' ddc: - '520' department: - _id: JoMa doi: 10.1093/mnras/stae2353 external_id: isi: - '001348009500001' file: - access_level: open_access checksum: efe0ce3580e01459f3be78eb111b35a9 content_type: application/pdf creator: dernst date_created: 2024-12-03T12:52:13Z date_updated: 2024-12-03T12:52:13Z file_id: '18613' file_name: 2024_MonthlyNRoyalAstronSoc_Meyer.pdf file_size: 29476699 relation: main_file success: 1 file_date_updated: 2024-12-03T12:52:13Z has_accepted_license: '1' intvolume: ' 535' isi: 1 issue: '1' language: - iso: eng month: '11' oa: 1 oa_version: Published Version page: 1067-1094 publication: Monthly Notices of the Royal Astronomical Society publication_identifier: eissn: - 1365-2966 issn: - 0035-8711 publication_status: published publisher: Oxford University Press quality_controlled: '1' scopus_import: '1' status: public title: 'JWST FRESCO: A comprehensive census of H β + [O iii] emitters at 6.8 < z < 9.0 in the GOODS fields' tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 535 year: '2024' ... --- OA_place: repository OA_type: green _id: '18586' abstract: - lang: eng text: "We prove the Central Limit Theorem and superpolynomial mixing for environment\r\nviewed from the particle process in quasi periodic Diophantine random environment. The main\r\ningredients are smoothness estimates for the solution of the Poisson equation and local limit asymptotics for certain accelerated walks." acknowledgement: "ents. The authors are grateful to Agnieszka Zelerowicz and the anonymous referee\r\nfor useful comments. The first author is grateful to Minsung Kim for providing some references.\r\nThe first author has been supported by the European Union Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie Grant Agreement No. 101034413. The second author has been supported by the NSF grant DMS 2246983." article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Klaudiusz S full_name: Czudek, Klaudiusz S id: 5c0e116e-803f-11ed-ab7e-90d572405f20 last_name: Czudek - first_name: Dmitry full_name: Dolgopyat, Dmitry last_name: Dolgopyat citation: ama: CZUDEK KS, Dolgopyat D. The central limit theorem and rate of mixing for simple random walks on the circle. Alea. 2024;21(2):1853-1865. doi:10.30757/ALEA.V21-70 apa: CZUDEK, K. S., & Dolgopyat, D. (2024). The central limit theorem and rate of mixing for simple random walks on the circle. Alea. Instituto Nacional de Matematica Pura e Aplicada. https://doi.org/10.30757/ALEA.V21-70 chicago: CZUDEK, Klaudiusz S, and Dmitry Dolgopyat. “The Central Limit Theorem and Rate of Mixing for Simple Random Walks on the Circle.” Alea. Instituto Nacional de Matematica Pura e Aplicada, 2024. https://doi.org/10.30757/ALEA.V21-70. ieee: K. S. CZUDEK and D. Dolgopyat, “The central limit theorem and rate of mixing for simple random walks on the circle,” Alea, vol. 21, no. 2. Instituto Nacional de Matematica Pura e Aplicada, pp. 1853–1865, 2024. ista: CZUDEK KS, Dolgopyat D. 2024. The central limit theorem and rate of mixing for simple random walks on the circle. Alea. 21(2), 1853–1865. mla: CZUDEK, Klaudiusz S., and Dmitry Dolgopyat. “The Central Limit Theorem and Rate of Mixing for Simple Random Walks on the Circle.” Alea, vol. 21, no. 2, Instituto Nacional de Matematica Pura e Aplicada, 2024, pp. 1853–65, doi:10.30757/ALEA.V21-70. short: K.S. CZUDEK, D. Dolgopyat, Alea 21 (2024) 1853–1865. date_created: 2024-11-24T23:01:49Z date_published: 2024-11-01T00:00:00Z date_updated: 2025-09-08T14:48:42Z day: '01' department: - _id: VaKa doi: 10.30757/ALEA.V21-70 ec_funded: 1 external_id: arxiv: - '2404.11700' isi: - '001440992000003' intvolume: ' 21' isi: 1 issue: '2' language: - iso: eng main_file_link: - open_access: '1' url: ' https://doi.org/10.48550/arXiv.2404.11700' month: '11' oa: 1 oa_version: Preprint page: 1853-1865 project: - _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c call_identifier: H2020 grant_number: '101034413' name: 'IST-BRIDGE: International postdoctoral program' publication: Alea publication_identifier: issn: - 1980-0436 publication_status: published publisher: Instituto Nacional de Matematica Pura e Aplicada quality_controlled: '1' scopus_import: '1' status: public title: The central limit theorem and rate of mixing for simple random walks on the circle type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 21 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '18587' abstract: - lang: eng text: Many scientific breakthroughs have depended on animal research, yet the ethical concerns surrounding the use of animals in experimentation have long prompted discussions about humane treatment and responsible scientific practice. First articulated by Russell and Burch, the 3Rs Principles of Replacement, Reduction, and Refinement have gained widespread recognition as basic guidelines for animal research. Over time, the 3Rs have transcended the research community, influencing policy decisions, animal welfare advocacy and public perception of animal experimentation. Despite their broad acceptance, interpretations of the 3Rs vary substantially, shaping statutory frameworks at various levels, with both technical and practical impacts. acknowledgement: This publication is based upon work from the Ethics Crossover Group within the COST Action IMPROVE (“3Rs concepts to improve the quality of biomedical science”), CA21139, supported by COST (European Cooperation in Science and Technology). We acknowledge the input and advice from Dr. Susanna Louhimies. article_processing_charge: No article_type: letter_note author: - first_name: Jan full_name: Lauwereyns, Jan last_name: Lauwereyns - first_name: Jeffrey full_name: Bajramovic, Jeffrey last_name: Bajramovic - first_name: Bettina full_name: Bert, Bettina last_name: Bert - first_name: Samuel full_name: Camenzind, Samuel last_name: Camenzind - first_name: Joery full_name: De Kock, Joery last_name: De Kock - first_name: Alisa full_name: Elezović, Alisa last_name: Elezović - first_name: Sevilay full_name: Erden, Sevilay last_name: Erden - first_name: Fernando full_name: Gonzalez-Uarquin, Fernando last_name: Gonzalez-Uarquin - first_name: Yesim Isil full_name: Ulman, Yesim Isil last_name: Ulman - first_name: Orsolya Ivett full_name: Hoffmann, Orsolya Ivett last_name: Hoffmann - first_name: Maria full_name: Kitsara, Maria last_name: Kitsara - first_name: Nikolaos full_name: Kostomitsopoulos, Nikolaos last_name: Kostomitsopoulos - first_name: Winfried full_name: Neuhaus, Winfried last_name: Neuhaus - first_name: Benoit full_name: Petit-Demouliere, Benoit last_name: Petit-Demouliere - first_name: Simone full_name: Pollo, Simone last_name: Pollo - first_name: Brígida full_name: Riso, Brígida last_name: Riso - first_name: Sophie full_name: Schober, Sophie id: 80b0a0ef-4b9f-11ec-b119-8d9d94c4a1d8 last_name: Schober - first_name: Athanassia full_name: Sotiropoulos, Athanassia last_name: Sotiropoulos - first_name: Aurélie full_name: Thomas, Aurélie last_name: Thomas - first_name: Augusto full_name: Vitale, Augusto last_name: Vitale - first_name: Doris full_name: Wilflingseder, Doris last_name: Wilflingseder - first_name: Arti full_name: Ahluwalia, Arti last_name: Ahluwalia citation: ama: Lauwereyns J, Bajramovic J, Bert B, et al. Toward a common interpretation of the 3Rs principles in animal research. Lab Animal. 2024;53:347-350. doi:10.1038/s41684-024-01476-2 apa: Lauwereyns, J., Bajramovic, J., Bert, B., Camenzind, S., De Kock, J., Elezović, A., … Ahluwalia, A. (2024). Toward a common interpretation of the 3Rs principles in animal research. Lab Animal. Springer Nature. https://doi.org/10.1038/s41684-024-01476-2 chicago: Lauwereyns, Jan, Jeffrey Bajramovic, Bettina Bert, Samuel Camenzind, Joery De Kock, Alisa Elezović, Sevilay Erden, et al. “Toward a Common Interpretation of the 3Rs Principles in Animal Research.” Lab Animal. Springer Nature, 2024. https://doi.org/10.1038/s41684-024-01476-2. ieee: J. Lauwereyns et al., “Toward a common interpretation of the 3Rs principles in animal research,” Lab Animal, vol. 53. Springer Nature, pp. 347–350, 2024. ista: Lauwereyns J, Bajramovic J, Bert B, Camenzind S, De Kock J, Elezović A, Erden S, Gonzalez-Uarquin F, Ulman YI, Hoffmann OI, Kitsara M, Kostomitsopoulos N, Neuhaus W, Petit-Demouliere B, Pollo S, Riso B, Schober S, Sotiropoulos A, Thomas A, Vitale A, Wilflingseder D, Ahluwalia A. 2024. Toward a common interpretation of the 3Rs principles in animal research. Lab Animal. 53, 347–350. mla: Lauwereyns, Jan, et al. “Toward a Common Interpretation of the 3Rs Principles in Animal Research.” Lab Animal, vol. 53, Springer Nature, 2024, pp. 347–50, doi:10.1038/s41684-024-01476-2. short: J. Lauwereyns, J. Bajramovic, B. Bert, S. Camenzind, J. De Kock, A. Elezović, S. Erden, F. Gonzalez-Uarquin, Y.I. Ulman, O.I. Hoffmann, M. Kitsara, N. Kostomitsopoulos, W. Neuhaus, B. Petit-Demouliere, S. Pollo, B. Riso, S. Schober, A. Sotiropoulos, A. Thomas, A. Vitale, D. Wilflingseder, A. Ahluwalia, Lab Animal 53 (2024) 347–350. date_created: 2024-11-24T23:01:49Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-09-08T14:50:31Z day: '01' ddc: - '570' department: - _id: PreCl doi: 10.1038/s41684-024-01476-2 external_id: isi: - '001355264100001' pmid: - '39548348' file: - access_level: open_access checksum: 67fc140f761581a291591f075e49b88d content_type: application/pdf creator: dernst date_created: 2024-12-03T14:07:04Z date_updated: 2024-12-03T14:07:04Z file_id: '18614' file_name: 2024_LabAnimal_Lauwereyns.pdf file_size: 967252 relation: main_file success: 1 file_date_updated: 2024-12-03T14:07:04Z has_accepted_license: '1' intvolume: ' 53' isi: 1 language: - iso: eng month: '12' oa: 1 oa_version: Published Version page: 347-350 pmid: 1 publication: Lab Animal publication_identifier: eissn: - 1548-4475 issn: - 0093-7355 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Toward a common interpretation of the 3Rs principles in animal research tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 53 year: '2024' ... --- OA_place: publisher _id: '18588' abstract: - lang: eng text: "This thesis is an experimental work about two distinct research projects that evolved from a single project: non-equilibrium dynamics of an acoustically vibrated particle and microfabrication of particles with nano-scale 3D printing. The first project explores non equilibrium dynamics of a particle driven by ultrasonic vibrations. We design an experimental system consisting of an electromechanical vibration scheme to drive the particle’s vibrations and an imaging scheme to track its trajectories. We study the trajectories to determine how the particle’s dynamics evolve under the driven conditions, considering out of equilibrium systems in the context of equilibrium statistical mechanics. Using a Langevin framework and the Boltzmann factor, we characterize the particle’s dynamics as complex; the particle motion\r\nis not purely diffusive. We extract physical parameters like spring constant, effective temperature, damping coefficient and resonance frequency.\r\n\r\nIn the second project, we explore and develop techniques in the design and microfabrication of particles across scales. Microfabrication involves building structures at the micron or submicron scale. These designed miniaturized patterns, objects, or devices are useful in biophysics, pharmacology, medical biology, and nanotechnology. We specifically apply two-photon polymerization, a form of 3D nano printing. We print millimetric particles, characterizing different designs to evaluate and showcase the resolution, aspect ratio integrity and print quality of the printing process. We also design and fabricate a microsensor to deflect under applicable force of order 0.1 pN. We present fundamental concepts needed to design the microsensor, showcasing 3D printing at considerably smaller scales down to the µm or below." acknowledged_ssus: - _id: NanoFab - _id: M-Shop acknowledgement: "I would like to acknowledge Scott Waitukaitis and Jérémie Palacci, for their supervision, and their extensive support of my learning. \r\n\r\nFor the beautiful characterization images used in this work, I would like to thank Dr. Daniel Grober, Samuel Hajek and Felix Pertl.\r\n\r\nThe Palacci group, particularly Malina Strugaru and Dan Grober, for their continuous guidance in decoding and following my streams of thought.\r\n\r\nTo the Waitukaitis group, for helping me find my footing in science, and making me feel at\r\nhome.\r\n\r\nTo the Nanofabrication Facility (NFF) at ISTA, for training me in significant aspects of my research. The MIBA Facility, and particularly Todor Asenov for consistently picking up the phone for my machining and designing needs.\r\n\r\nTo my friends, Mariana, Lenka, Aaron, Rebecca, Eavan who provided an ear, wine, and a lot more when I needed to vent, talk through my crises as well as experiment. For the walks, for the coffees, for reading through my work and providing edits, for dinners to take me out of blocks and binds and for cheering me on when it felt insurmountable. \r\n\r\nFinally, I am grateful to Griff and Fletcher, whose music helped me through several blocks, especially with my writing.\r\n\r\nMy science would not have been possible without the guidance, support and contributions of\r\nall these people, and more." alternative_title: - ISTA Master's Thesis article_processing_charge: No author: - first_name: Cecelia N full_name: Mweka, Cecelia N id: 2a69ab4b-896a-11ed-bdf8-cb8641cf2b21 last_name: Mweka citation: ama: Mweka CN. Non equilibrium dynamics of driven individual particles and 3D printing across scales. 2024. doi:10.15479/at:ista:18588 apa: Mweka, C. N. (2024). Non equilibrium dynamics of driven individual particles and 3D printing across scales. Institute of Science and Technology Austria. https://doi.org/10.15479/at:ista:18588 chicago: Mweka, Cecelia N. “Non Equilibrium Dynamics of Driven Individual Particles and 3D Printing across Scales.” Institute of Science and Technology Austria, 2024. https://doi.org/10.15479/at:ista:18588. ieee: C. N. Mweka, “Non equilibrium dynamics of driven individual particles and 3D printing across scales,” Institute of Science and Technology Austria, 2024. ista: Mweka CN. 2024. Non equilibrium dynamics of driven individual particles and 3D printing across scales. Institute of Science and Technology Austria. mla: Mweka, Cecelia N. Non Equilibrium Dynamics of Driven Individual Particles and 3D Printing across Scales. Institute of Science and Technology Austria, 2024, doi:10.15479/at:ista:18588. short: C.N. Mweka, Non Equilibrium Dynamics of Driven Individual Particles and 3D Printing across Scales, Institute of Science and Technology Austria, 2024. corr_author: '1' date_created: 2024-11-27T09:12:02Z date_published: 2024-11-29T00:00:00Z date_updated: 2026-04-07T12:42:13Z day: '29' ddc: - '530' degree_awarded: MS department: - _id: GradSch doi: 10.15479/at:ista:18588 file: - access_level: open_access checksum: 054ed7a5e5ae6e7220e6bb37ea57a3c3 content_type: application/pdf creator: cmweka date_created: 2024-11-28T12:50:32Z date_updated: 2024-11-28T12:50:32Z file_id: '18597' file_name: Cecelia Mweka Master Thesis.pdf file_size: 3836671 relation: main_file success: 1 - access_level: closed checksum: 7d7d9299f090d83e628d65d93116e8c2 content_type: application/vnd.openxmlformats-officedocument.wordprocessingml.document creator: cmweka date_created: 2024-11-28T12:51:43Z date_updated: 2024-12-13T11:30:53Z file_id: '18598' file_name: Cecelia Mweka Master Thesis.docx file_size: 7068210 relation: source_file file_date_updated: 2024-12-13T11:30:53Z has_accepted_license: '1' language: - iso: eng month: '11' oa: 1 oa_version: Published Version page: '61' publication_identifier: issn: - 2791-4585 publication_status: published publisher: Institute of Science and Technology Austria status: public supervisor: - first_name: Scott R full_name: Waitukaitis, Scott R id: 3A1FFC16-F248-11E8-B48F-1D18A9856A87 last_name: Waitukaitis orcid: 0000-0002-2299-3176 - first_name: Jérémie A full_name: Palacci, Jérémie A id: 8fb92548-2b22-11eb-b7c1-a3f0d08d7c7d last_name: Palacci orcid: 0000-0002-7253-9465 title: Non equilibrium dynamics of driven individual particles and 3D printing across scales type: dissertation user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '18596' abstract: - lang: eng text: Hormone perception and signaling pathways have a fundamental regulatory function in the physiological processes of plants. Cytokinins, a class of plant hormones, regulate cell division and meristem maintenance. The cytokinin signaling pathway is well established in the model plant Arabidopsis thaliana. Several negative feedback mechanisms, tightly controlling cytokinin signaling output, have been described previously. In this study, we identified a new feedback mechanism executed through alternative splicing of the cytokinin receptor AHK4/CRE1. A novel splicing variant named CRE1int7 results from seventh intron retention, introducing a premature termination codon in the transcript. We showed that CRE1int7 is translated in planta into a truncated receptor lacking the C-terminal receiver domain essential for signal transduction. CRE1int7 can bind cytokinin but cannot activate the downstream cascade. We present a novel negative feedback mechanism of the cytokinin signaling pathway, facilitated by a decoy receptor that can inactivate canonical cytokinin receptors via dimerization and compete with them for ligand binding. Ensuring proper plant growth and development requires precise control of the cytokinin signaling pathway at several levels. CRE1int7 represents a so-far unknown mechanism for fine-tuning the cytokinin signaling pathway in Arabidopsis. acknowledged_ssus: - _id: Bio - _id: LifeSc acknowledgement: We dedicate this paper to the deceased Petr Galuszka for his inspiration and support of our project. We thank Prof. Peter Hedden for constructive criticism of the manuscript and English editing. No conflict of interest is declared. article_processing_charge: Yes (in subscription journal) article_type: original author: - first_name: Michaela full_name: Králová, Michaela last_name: Králová - first_name: Ivona full_name: Kubalová, Ivona last_name: Kubalová - first_name: Jakub full_name: Hajný, Jakub last_name: Hajný - first_name: Karolina full_name: Kubiasova, Karolina id: 946011F4-3E71-11EA-860B-C7A73DDC885E last_name: Kubiasova orcid: 0000-0001-5630-9419 - first_name: Karolína full_name: Vagaská, Karolína last_name: Vagaská - first_name: Zengxiang full_name: Ge, Zengxiang id: f43371a3-09ff-11eb-8013-bd0c6a2f6de8 last_name: Ge orcid: 0000-0001-9381-3577 - first_name: Michelle C full_name: Gallei, Michelle C id: 35A03822-F248-11E8-B48F-1D18A9856A87 last_name: Gallei orcid: 0000-0003-1286-7368 - first_name: Hana full_name: Semerádová, Hana id: 42FE702E-F248-11E8-B48F-1D18A9856A87 last_name: Semerádová - first_name: Anna full_name: Kuchařová, Anna last_name: Kuchařová - first_name: Martin full_name: Hönig, Martin last_name: Hönig - first_name: Aline full_name: Monzer, Aline id: 2DB5D88C-D7B3-11E9-B8FD-7907E6697425 last_name: Monzer - first_name: Martin full_name: Kovačik, Martin last_name: Kovačik - first_name: Jiří full_name: Friml, Jiří id: 4159519E-F248-11E8-B48F-1D18A9856A87 last_name: Friml orcid: 0000-0002-8302-7596 - first_name: Ondřej full_name: Novák, Ondřej last_name: Novák - first_name: Eva full_name: Benková, Eva id: 38F4F166-F248-11E8-B48F-1D18A9856A87 last_name: Benková orcid: 0000-0002-8510-9739 - first_name: Yoshihisa full_name: Ikeda, Yoshihisa last_name: Ikeda - first_name: David full_name: Zalabák, David last_name: Zalabák citation: ama: Králová M, Kubalová I, Hajný J, et al. A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis. Molecular Plant. 2024;17(12):1850-1865. doi:10.1016/j.molp.2024.11.001 apa: Králová, M., Kubalová, I., Hajný, J., Kubiasova, K., Vagaská, K., Ge, Z., … Zalabák, D. (2024). A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis. Molecular Plant. Elsevier. https://doi.org/10.1016/j.molp.2024.11.001 chicago: Králová, Michaela, Ivona Kubalová, Jakub Hajný, Karolina Kubiasova, Karolína Vagaská, Zengxiang Ge, Michelle C Gallei, et al. “A Decoy Receptor Derived from Alternative Splicing Fine-Tunes Cytokinin Signaling in Arabidopsis.” Molecular Plant. Elsevier, 2024. https://doi.org/10.1016/j.molp.2024.11.001. ieee: M. Králová et al., “A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis,” Molecular Plant, vol. 17, no. 12. Elsevier, pp. 1850–1865, 2024. ista: Králová M, Kubalová I, Hajný J, Kubiasova K, Vagaská K, Ge Z, Gallei MC, Semerádová H, Kuchařová A, Hönig M, Monzer A, Kovačik M, Friml J, Novák O, Benková E, Ikeda Y, Zalabák D. 2024. A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis. Molecular Plant. 17(12), 1850–1865. mla: Králová, Michaela, et al. “A Decoy Receptor Derived from Alternative Splicing Fine-Tunes Cytokinin Signaling in Arabidopsis.” Molecular Plant, vol. 17, no. 12, Elsevier, 2024, pp. 1850–65, doi:10.1016/j.molp.2024.11.001. short: M. Králová, I. Kubalová, J. Hajný, K. Kubiasova, K. Vagaská, Z. Ge, M.C. Gallei, H. Semerádová, A. Kuchařová, M. Hönig, A. Monzer, M. Kovačik, J. Friml, O. Novák, E. Benková, Y. Ikeda, D. Zalabák, Molecular Plant 17 (2024) 1850–1865. date_created: 2024-11-28T11:13:35Z date_published: 2024-12-02T00:00:00Z date_updated: 2025-09-08T14:46:45Z day: '02' ddc: - '580' department: - _id: JiFr - _id: EvBe doi: 10.1016/j.molp.2024.11.001 external_id: isi: - '001373778300001' pmid: - '39501563' file: - access_level: open_access checksum: a11feea4b1677df76b632eca04bfc1dd content_type: application/pdf creator: dernst date_created: 2024-12-03T11:08:09Z date_updated: 2024-12-03T11:08:09Z file_id: '18612' file_name: 2024_MolecularPlant_Kralova.pdf file_size: 3308945 relation: main_file success: 1 file_date_updated: 2024-12-03T11:08:09Z has_accepted_license: '1' intvolume: ' 17' isi: 1 issue: '12' language: - iso: eng month: '12' oa: 1 oa_version: Published Version page: 1850-1865 pmid: 1 publication: Molecular Plant publication_identifier: issn: - 1674-2052 publication_status: published publisher: Elsevier quality_controlled: '1' scopus_import: '1' status: public title: A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis tmp: image: /images/cc_by_nc_nd.png legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0) short: CC BY-NC-ND (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 17 year: '2024' ... --- OA_type: closed access _id: '18599' abstract: - lang: eng text: "Hypernode logic can reason about the prefix relation on stutter-reduced finite traces through the stutter-reduced prefix predicate. We increase the expressiveness of hypernode logic in two ways. First, we split the stutter-reduced prefix predicate into an explicit stutter-reduction operator and the classical prefix predicate on words. This change gives hypernode logic the ability to combine synchronous and asynchronous reasoning by explicitly stating which parts of traces can stutter. Second, we allow the use of regular expressions in formulas to reason about the structure of traces. This change enables hypernode logic to describe a mixture of trace properties and hyperproperties.\r\n\r\nWe show how to translate extended hypernode logic formulas into multi-track automata, which are automata that read multiple input words. Then we describe a fully online monitoring algorithm for monitoring k-safety hyperproperties specified in the logic. We have implemented the monitoring algorithm, and evaluated it on monitoring synchronous and asynchronous versions of observational determinism, and on checking the privacy preservation by compiler optimizations." acknowledgement: This work was supported in part by the ERC-2020-AdG 101020093, and by the Austrian Science Fund (FWF) SFB project SpyCoDe F8502. alternative_title: - LNCS article_processing_charge: No author: - first_name: Marek full_name: Chalupa, Marek id: 87e34708-d6c6-11ec-9f5b-9391e7be2463 last_name: Chalupa - first_name: Thomas A full_name: Henzinger, Thomas A id: 40876CD8-F248-11E8-B48F-1D18A9856A87 last_name: Henzinger orcid: 0000-0002-2985-7724 - first_name: Ana full_name: Oliveira da Costa, Ana id: f347ec37-6676-11ee-b395-a888cb7b4fb4 last_name: Oliveira da Costa orcid: 0000-0002-8741-5799 citation: ama: 'Chalupa M, Henzinger TA, Oliveira da Costa A. Monitoring extended hypernode logic. In: Integrated Formal Methods. Vol 15234. Springer Nature; 2024:151-171. doi:10.1007/978-3-031-76554-4_9' apa: Chalupa, M., Henzinger, T. A., & Oliveira da Costa, A. (2024). Monitoring extended hypernode logic. In Integrated Formal Methods (Vol. 15234, pp. 151–171). Springer Nature. https://doi.org/10.1007/978-3-031-76554-4_9 chicago: Chalupa, Marek, Thomas A Henzinger, and Ana Oliveira da Costa. “Monitoring Extended Hypernode Logic.” In Integrated Formal Methods, 15234:151–71. Springer Nature, 2024. https://doi.org/10.1007/978-3-031-76554-4_9. ieee: M. Chalupa, T. A. Henzinger, and A. Oliveira da Costa, “Monitoring extended hypernode logic,” in Integrated Formal Methods, 2024, vol. 15234, pp. 151–171. ista: Chalupa M, Henzinger TA, Oliveira da Costa A. 2024. Monitoring extended hypernode logic. Integrated Formal Methods. , LNCS, vol. 15234, 151–171. mla: Chalupa, Marek, et al. “Monitoring Extended Hypernode Logic.” Integrated Formal Methods, vol. 15234, Springer Nature, 2024, pp. 151–71, doi:10.1007/978-3-031-76554-4_9. short: M. Chalupa, T.A. Henzinger, A. Oliveira da Costa, in:, Integrated Formal Methods, Springer Nature, 2024, pp. 151–171. corr_author: '1' date_created: 2024-12-01T23:01:52Z date_published: 2024-11-13T00:00:00Z date_updated: 2025-09-08T14:47:22Z day: '13' department: - _id: ToHe doi: 10.1007/978-3-031-76554-4_9 ec_funded: 1 external_id: isi: - '001416640500009' intvolume: ' 15234' isi: 1 language: - iso: eng month: '11' oa_version: None page: 151-171 project: - _id: 62781420-2b32-11ec-9570-8d9b63373d4d call_identifier: H2020 grant_number: '101020093' name: Vigilant Algorithmic Monitoring of Software - _id: 34a1b658-11ca-11ed-8bc3-c75229f0241e grant_number: F8502 name: Interface Theory for Security and Privacy publication: Integrated Formal Methods publication_identifier: eissn: - 1611-3349 isbn: - '9783031765537' issn: - 0302-9743 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Monitoring extended hypernode logic type: conference user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 15234 year: '2024' ... --- OA_place: repository OA_type: green _id: '18600' abstract: - lang: eng text: 'The analysis of formal models that include quantitative aspects such as timing or probabilistic choices is performed by quantitative verification tools. Broad and mature tool support is available for computing basic properties such as expected rewards on basic models such as Markov chains. Previous editions of QComp, the comparison of tools for the analysis of quantitative formal models, focused on this setting. Many application scenarios, however, require more advanced property types such as LTL and parameter synthesis queries as well as advanced models like stochastic games and partially observable MDPs. For these, tool support is in its infancy today. This paper presents the outcomes of QComp 2023: a survey of the state of the art in quantitative verification tool support for advanced property types and models. With tools ranging from first research prototypes to well-supported integrations into established toolsets, this report highlights today’s active areas and tomorrow’s challenges in tool-focused research for quantitative verification.' acknowledgement: The authors are ordered alphabetically. This work was supported by DFG RTG 2236/2 (UnRAVeL) and DFG project TRR 248 (CPEC, ID 389792660), by the EU under MSCA grant agreements 101008233 (MISSION), 101034413 (IST-BRIDGE), and 101067199 (ProSVED), by ERC Starting Grant 101077178 (DEUCE), ERC Consolidator Grant 864075 (CAESAR), and ERC Advanced Grant 834115 (FUN2MODEL), by GAČR grant GA23-06963S (VESCAA), by National Science Foundation grant 1856733, by NextGenerationEU project D53D23008400006 (SMARTITUDE), and by NWO VENI grant 639.021.754. alternative_title: - LNCS article_processing_charge: No arxiv: 1 author: - first_name: Roman full_name: Andriushchenko, Roman last_name: Andriushchenko - first_name: Alexander full_name: Bork, Alexander last_name: Bork - first_name: Carlos E. full_name: Budde, Carlos E. last_name: Budde - first_name: Milan full_name: Češka, Milan last_name: Češka - first_name: Kush full_name: Grover, Kush last_name: Grover - first_name: Ernst Moritz full_name: Hahn, Ernst Moritz last_name: Hahn - first_name: Arnd full_name: Hartmanns, Arnd last_name: Hartmanns - first_name: Bryant full_name: Israelsen, Bryant last_name: Israelsen - first_name: Nils full_name: Jansen, Nils last_name: Jansen - first_name: Joshua full_name: Jeppson, Joshua last_name: Jeppson - first_name: Sebastian full_name: Junges, Sebastian last_name: Junges - first_name: Maximilian A. full_name: Köhl, Maximilian A. last_name: Köhl - first_name: Bettina full_name: Könighofer, Bettina last_name: Könighofer - first_name: Jan full_name: Kretinsky, Jan id: 44CEF464-F248-11E8-B48F-1D18A9856A87 last_name: Kretinsky orcid: 0000-0002-8122-2881 - first_name: Tobias full_name: Meggendorfer, Tobias id: b21b0c15-30a2-11eb-80dc-f13ca25802e1 last_name: Meggendorfer orcid: 0000-0002-1712-2165 - first_name: David full_name: Parker, David last_name: Parker - first_name: Stefan full_name: Pranger, Stefan last_name: Pranger - first_name: Tim full_name: Quatmann, Tim last_name: Quatmann - first_name: Enno full_name: Ruijters, Enno last_name: Ruijters - first_name: Landon full_name: Taylor, Landon last_name: Taylor - first_name: Matthias full_name: Volk, Matthias last_name: Volk - first_name: Maximilian full_name: Weininger, Maximilian id: 02ab0197-cc70-11ed-ab61-918e71f56881 last_name: Weininger - first_name: Zhen full_name: Zhang, Zhen last_name: Zhang citation: ama: 'Andriushchenko R, Bork A, Budde CE, et al. Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report. In: TOOLympics Challenge 2023. Vol 14550. Springer Nature; 2024:90-146. doi:10.1007/978-3-031-67695-6_4' apa: 'Andriushchenko, R., Bork, A., Budde, C. E., Češka, M., Grover, K., Hahn, E. M., … Zhang, Z. (2024). Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report. In TOOLympics Challenge 2023 (Vol. 14550, pp. 90–146). Springer Nature. https://doi.org/10.1007/978-3-031-67695-6_4' chicago: 'Andriushchenko, Roman, Alexander Bork, Carlos E. Budde, Milan Češka, Kush Grover, Ernst Moritz Hahn, Arnd Hartmanns, et al. “Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report.” In TOOLympics Challenge 2023, 14550:90–146. Springer Nature, 2024. https://doi.org/10.1007/978-3-031-67695-6_4.' ieee: 'R. Andriushchenko et al., “Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report,” in TOOLympics Challenge 2023, 2024, vol. 14550, pp. 90–146.' ista: 'Andriushchenko R, Bork A, Budde CE, Češka M, Grover K, Hahn EM, Hartmanns A, Israelsen B, Jansen N, Jeppson J, Junges S, Köhl MA, Könighofer B, Kretinsky J, Meggendorfer T, Parker D, Pranger S, Quatmann T, Ruijters E, Taylor L, Volk M, Weininger M, Zhang Z. 2024. Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report. TOOLympics Challenge 2023. , LNCS, vol. 14550, 90–146.' mla: 'Andriushchenko, Roman, et al. “Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report.” TOOLympics Challenge 2023, vol. 14550, Springer Nature, 2024, pp. 90–146, doi:10.1007/978-3-031-67695-6_4.' short: R. Andriushchenko, A. Bork, C.E. Budde, M. Češka, K. Grover, E.M. Hahn, A. Hartmanns, B. Israelsen, N. Jansen, J. Jeppson, S. Junges, M.A. Köhl, B. Könighofer, J. Kretinsky, T. Meggendorfer, D. Parker, S. Pranger, T. Quatmann, E. Ruijters, L. Taylor, M. Volk, M. Weininger, Z. Zhang, in:, TOOLympics Challenge 2023, Springer Nature, 2024, pp. 90–146. date_created: 2024-12-01T23:01:53Z date_published: 2024-11-01T00:00:00Z date_updated: 2025-09-08T14:45:11Z day: '01' department: - _id: KrCh doi: 10.1007/978-3-031-67695-6_4 external_id: arxiv: - '2405.13583' isi: - '001434957500004' intvolume: ' 14550' isi: 1 language: - iso: eng main_file_link: - open_access: '1' url: ' https://doi.org/10.48550/arXiv.2405.13583' month: '11' oa: 1 oa_version: Preprint page: 90-146 publication: TOOLympics Challenge 2023 publication_identifier: eissn: - 1611-3349 isbn: - '9783031676949' issn: - 0302-9743 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: 'Tools at the Frontiers of Quantitative Verification: QComp 2023 Competition Report' type: conference user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 14550 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18602' abstract: - lang: eng text: Semiconductor quantum dots (QDs) in planar germanium (Ge) heterostructures have emerged as front-runners for future hole-based quantum processors. Here, we present strong coupling between a hole charge qubit, defined in a double quantum dot (DQD) in planar Ge, and microwave photons in a high-impedance (Zr = 1.3 kΩ) resonator based on an array of superconducting quantum interference devices (SQUIDs). Our investigation reveals vacuum-Rabi splittings with coupling strengths up to g0/2π = 260 MHz, and a cooperativity of C ~ 100, dependent on DQD tuning. Furthermore, utilizing the frequency tunability of our resonator, we explore the quenched energy splitting associated with strong Coulomb correlation effects in Ge QDs. The observed enhanced coherence of the strongly correlated excited state signals the presence of distinct symmetries within related spin functions, serving as a precursor to the strong coupling between photons and spin-charge hybrid qubits in planar Ge. This work paves the way towards coherent quantum connections between remote hole qubits in planar Ge, required to scale up hole-based quantum processors. acknowledgement: The authors thank Simone Frasca, Vincent Jouanny, Guillaume Beaulieu, Camille Roy, Dominic Dahinden, Davide Lombardo, Daniel Chrastina, and Siddhart Gautam for contributing to some cleanroom fabrication steps, the measurement setup, device simulations, data analysis, and for the useful discussions. P.S. acknowledges support from the Swiss National Science Foundation (SNSF) through the grants Ref. No. 200021 200418 and Ref. No. 206021_205335, and from the Swiss State Secretariat for Education, Research and Innovation (SERI) under contract number 01042765 SEFRI MB22.00081. W.J. acknowledges support from the EPFL QSE Postdoctoral Fellowship Grant. S.B., D.L., and P.S. acknowledge support from the NCCR Spin Qubit in Silicon (NCCR-SPIN) Grant No. 51NF40-180604. M.J., G.K., G.I., and S.C. acknowledge support from the Horizon Europe Project IGNITE ID 101070193. G.K. acknowledges support from the FWF via the P32235 and I05060 projects. article_number: '10177' article_processing_charge: Yes article_type: original author: - first_name: Franco full_name: De Palma, Franco last_name: De Palma - first_name: Fabian full_name: Oppliger, Fabian last_name: Oppliger - first_name: Wonjin full_name: Jang, Wonjin last_name: Jang - first_name: Stefano full_name: Bosco, Stefano last_name: Bosco - first_name: Marian full_name: Janik, Marian id: 396A1950-F248-11E8-B48F-1D18A9856A87 last_name: Janik orcid: 0009-0003-9037-8831 - first_name: Stefano full_name: Calcaterra, Stefano last_name: Calcaterra - first_name: Georgios full_name: Katsaros, Georgios id: 38DB5788-F248-11E8-B48F-1D18A9856A87 last_name: Katsaros orcid: 0000-0001-8342-202X - first_name: Giovanni full_name: Isella, Giovanni last_name: Isella - first_name: Daniel full_name: Loss, Daniel last_name: Loss - first_name: Pasquale full_name: Scarlino, Pasquale last_name: Scarlino citation: ama: De Palma F, Oppliger F, Jang W, et al. Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states. Nature Communications. 2024;15. doi:10.1038/s41467-024-54520-7 apa: De Palma, F., Oppliger, F., Jang, W., Bosco, S., Janik, M., Calcaterra, S., … Scarlino, P. (2024). Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states. Nature Communications. Springer Nature. https://doi.org/10.1038/s41467-024-54520-7 chicago: De Palma, Franco, Fabian Oppliger, Wonjin Jang, Stefano Bosco, Marian Janik, Stefano Calcaterra, Georgios Katsaros, Giovanni Isella, Daniel Loss, and Pasquale Scarlino. “Strong Hole-Photon Coupling in Planar Ge for Probing Charge Degree and Strongly Correlated States.” Nature Communications. Springer Nature, 2024. https://doi.org/10.1038/s41467-024-54520-7. ieee: F. De Palma et al., “Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states,” Nature Communications, vol. 15. Springer Nature, 2024. ista: De Palma F, Oppliger F, Jang W, Bosco S, Janik M, Calcaterra S, Katsaros G, Isella G, Loss D, Scarlino P. 2024. Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states. Nature Communications. 15, 10177. mla: De Palma, Franco, et al. “Strong Hole-Photon Coupling in Planar Ge for Probing Charge Degree and Strongly Correlated States.” Nature Communications, vol. 15, 10177, Springer Nature, 2024, doi:10.1038/s41467-024-54520-7. short: F. De Palma, F. Oppliger, W. Jang, S. Bosco, M. Janik, S. Calcaterra, G. Katsaros, G. Isella, D. Loss, P. Scarlino, Nature Communications 15 (2024). date_created: 2024-12-01T23:01:53Z date_published: 2024-12-01T00:00:00Z date_updated: 2025-09-08T14:46:06Z day: '01' ddc: - '530' department: - _id: GeKa doi: 10.1038/s41467-024-54520-7 external_id: isi: - '001362684200001' pmid: - '39580488' file: - access_level: open_access checksum: ef9f99a84089c388904cc8aa8d89c55a content_type: application/pdf creator: dernst date_created: 2024-12-03T11:00:15Z date_updated: 2024-12-03T11:00:15Z file_id: '18611' file_name: 2024_NatureComm_dePalma.pdf file_size: 5288092 relation: main_file success: 1 file_date_updated: 2024-12-03T11:00:15Z has_accepted_license: '1' intvolume: ' 15' isi: 1 language: - iso: eng month: '12' oa: 1 oa_version: Published Version pmid: 1 project: - _id: 237B3DA4-32DE-11EA-91FC-C7463DDC885E call_identifier: FWF grant_number: P32235 name: Towards scalable hut wire quantum devices - _id: c0977eea-5a5b-11eb-8a69-a862db0cf4d1 grant_number: I05060 name: High impedance circuit quantum electrodynamics with hole spins publication: Nature Communications publication_identifier: eissn: - 2041-1723 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Strong hole-photon coupling in planar Ge for probing charge degree and strongly correlated states tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 15 year: '2024' ... --- APC_amount: 6248,82 EUR DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18603' abstract: - lang: eng text: It is widely believed that information storage in neuronal circuits involves nanoscopic structural changes at synapses, resulting in the formation of synaptic engrams. However, direct evidence for this hypothesis is lacking. To test this conjecture, we combined chemical potentiation, functional analysis by paired pre-postsynaptic recordings, and structural analysis by electron microscopy (EM) and freeze-fracture replica labeling (FRL) at the rodent hippocampal mossy fiber synapse, a key synapse in the trisynaptic circuit of the hippocampus. Biophysical analysis of synaptic transmission revealed that forskolin-induced chemical potentiation increased the readily releasable vesicle pool size and vesicular release probability by 146% and 49%, respectively. Structural analysis of mossy fiber synapses by EM and FRL demonstrated an increase in the number of vesicles close to the plasma membrane and the number of clusters of the priming protein Munc13-1, indicating an increase in the number of both docked and primed vesicles. Furthermore, FRL analysis revealed a significant reduction of the distance between Munc13-1 and CaV2.1 Ca2+ channels, suggesting reconfiguration of the channel-vesicle coupling nanotopography. Our results indicate that presynaptic plasticity is associated with structural reorganization of active zones. We propose that changes in potential nanoscopic organization at synaptic vesicle release sites may be correlates of learning and memory at a plastic central synapse. acknowledged_ssus: - _id: EM-Fac - _id: PreCl acknowledgement: "We thank Carolina Borges-Merjane, Jing-Jing Chen, Katharina Lichter, and Samuel Young for critically reading the manuscript; the Electron Microscopy Facility of ISTA, in particular Vanessa Zheden, for extensive support, advice, and experimental assistance; the Preclinical Facility of ISTA, in particular Victoria Wimmer and Michael Schunn, for experimental assistance; Florian Marr and Christina Altmutter for technical support; Alois Schlögl for help with analysis; and Eleftheria Kralli-Beller for manuscript editing. We also thank Cordelia Imig for providing Munc13-1cKO-Munc13-2/3(−/−) mutant mice. Part of the work has been published in O.K.’s thesis in partial fulfillment of the requirements for the degree of Doctor of Philosophy.\r\nThis project received funding from the European Research Council and European Union’s Horizon 2020 research and innovation programme (ERC 692692 to P.J.; https://cordis.europa.eu/project/id/692692/de) and from the Fond zur Förderung der Wissenschaftlichen Forschung (Z312-B27 Wittgenstein award to P.J., https://www.fwf.ac.at/en/funding/portfolio/projects/fwf-wittgenstein-award; W1205-B09 and P36232-B to P.J., https://www.fwf.ac.at/en/funding; I6166-B to R.S.; https://www.fwf.ac.at/en/funding). The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript." article_number: e3002879 article_processing_charge: Yes article_type: original author: - first_name: Olena full_name: Kim, Olena id: 3F8ABDDA-F248-11E8-B48F-1D18A9856A87 last_name: Kim orcid: 0000-0003-2344-1039 - first_name: Yuji full_name: Okamoto, Yuji id: 3337E116-F248-11E8-B48F-1D18A9856A87 last_name: Okamoto orcid: 0000-0003-0408-6094 - first_name: Walter full_name: Kaufmann, Walter id: 3F99E422-F248-11E8-B48F-1D18A9856A87 last_name: Kaufmann orcid: 0000-0001-9735-5315 - first_name: Nils full_name: Brose, Nils last_name: Brose - first_name: Ryuichi full_name: Shigemoto, Ryuichi id: 499F3ABC-F248-11E8-B48F-1D18A9856A87 last_name: Shigemoto orcid: 0000-0001-8761-9444 - first_name: Peter M full_name: Jonas, Peter M id: 353C1B58-F248-11E8-B48F-1D18A9856A87 last_name: Jonas orcid: 0000-0001-5001-4804 citation: ama: Kim O, Okamoto Y, Kaufmann W, Brose N, Shigemoto R, Jonas PM. Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons. PLoS Biology. 2024;22(11). doi:10.1371/journal.pbio.3002879 apa: Kim, O., Okamoto, Y., Kaufmann, W., Brose, N., Shigemoto, R., & Jonas, P. M. (2024). Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons. PLoS Biology. Public Library of Science. https://doi.org/10.1371/journal.pbio.3002879 chicago: Kim, Olena, Yuji Okamoto, Walter Kaufmann, Nils Brose, Ryuichi Shigemoto, and Peter M Jonas. “Presynaptic CAMP-PKA-Mediated Potentiation Induces Reconfiguration of Synaptic Vesicle Pools and Channel-Vesicle Coupling at Hippocampal Mossy Fiber Boutons.” PLoS Biology. Public Library of Science, 2024. https://doi.org/10.1371/journal.pbio.3002879. ieee: O. Kim, Y. Okamoto, W. Kaufmann, N. Brose, R. Shigemoto, and P. M. Jonas, “Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons,” PLoS Biology, vol. 22, no. 11. Public Library of Science, 2024. ista: Kim O, Okamoto Y, Kaufmann W, Brose N, Shigemoto R, Jonas PM. 2024. Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons. PLoS Biology. 22(11), e3002879. mla: Kim, Olena, et al. “Presynaptic CAMP-PKA-Mediated Potentiation Induces Reconfiguration of Synaptic Vesicle Pools and Channel-Vesicle Coupling at Hippocampal Mossy Fiber Boutons.” PLoS Biology, vol. 22, no. 11, e3002879, Public Library of Science, 2024, doi:10.1371/journal.pbio.3002879. short: O. Kim, Y. Okamoto, W. Kaufmann, N. Brose, R. Shigemoto, P.M. Jonas, PLoS Biology 22 (2024). corr_author: '1' date_created: 2024-12-01T23:01:54Z date_published: 2024-11-18T00:00:00Z date_updated: 2026-04-16T12:20:34Z day: '18' ddc: - '570' department: - _id: PeJo - _id: EM-Fac - _id: RySh doi: 10.1371/journal.pbio.3002879 ec_funded: 1 external_id: isi: - '001358568700003' pmid: - '39556620' file: - access_level: open_access checksum: 7de2dcb50deb65dde05c80082bb85a82 content_type: application/pdf creator: dernst date_created: 2024-12-03T08:56:53Z date_updated: 2024-12-03T08:56:53Z file_id: '18608' file_name: 2024_PloSBio_Kim.pdf file_size: 3057631 relation: main_file success: 1 file_date_updated: 2024-12-03T08:56:53Z has_accepted_license: '1' intvolume: ' 22' isi: 1 issue: '11' language: - iso: eng month: '11' oa: 1 oa_version: Published Version pmid: 1 project: - _id: 25B7EB9E-B435-11E9-9278-68D0E5697425 call_identifier: H2020 grant_number: '692692' name: Biophysics and circuit function of a giant cortical glutamatergic synapse - _id: 25C5A090-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: Z00312 name: Synaptic communication in neuronal microcircuits - _id: bd88be38-d553-11ed-ba76-81d5a70a6ef5 grant_number: P36232 name: Mechanisms of GABA release in hippocampal circuits - _id: b1b85715-d554-11ed-a5ad-84a07fc9f18e grant_number: I06166 name: Structural & functional basis of presynaptic plasticity - _id: 25C3DBB6-B435-11E9-9278-68D0E5697425 call_identifier: FWF grant_number: W01205 name: Zellkommunikation in Gesundheit und Krankheit - _id: 3AC91DDA-15DF-11EA-824D-93A3E7B544D1 call_identifier: FWF name: FWF Open Access Fund publication: PLoS Biology publication_identifier: eissn: - 1545-7885 issn: - 1544-9173 publication_status: published publisher: Public Library of Science quality_controlled: '1' related_material: record: - id: '18296' relation: research_data status: public scopus_import: '1' status: public title: Presynaptic cAMP-PKA-mediated potentiation induces reconfiguration of synaptic vesicle pools and channel-vesicle coupling at hippocampal mossy fiber boutons tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 22 year: '2024' ... --- DOAJ_listed: '1' OA_place: publisher OA_type: gold _id: '18604' abstract: - lang: eng text: 'A face in a curve arrangement is called popular if it is bounded by the same curve multiple times. Motivated by the automatic generation of curved nonogram puzzles, we investigate possibilities to eliminate the popular faces in an arrangement by inserting a single additional curve. This turns out to be NP-hard; however, it becomes tractable when the number of popular faces is small: We present a randomized FPT-time algorithm where the parameter is the number of popular faces.' acknowledgement: "This work was initiated at the 16th European Research Week on Geometric Graphs in Strobl in 2019. A.W. has been supported by the Austrian Science Fund (FWF): W1230. S.T. has been funded by the Vienna Science and Technology Fund (WWTF) [10.47379/ICT19035] and by the NWO Gravitation project NETWORKS under grant no. 024.002.003. Part of the work was done while A.W. was emplyed at Graz University of Technology. Preliminary versions of this work have been presented at the 38th European Workshop on Computational Geometry (EuroCG\r\n2022) in Perugia [10] and at the 31st International Symposium on Graph Drawing and Network Visualization (GD 2023) in Isola delle Femmine [11]." article_processing_charge: No article_type: original arxiv: 1 author: - first_name: Phoebe full_name: De Nooijer, Phoebe last_name: De Nooijer - first_name: Soeren full_name: Terziadis, Soeren last_name: Terziadis - first_name: Alexandra full_name: Weinberger, Alexandra last_name: Weinberger - first_name: Zuzana full_name: Masárová, Zuzana id: 45CFE238-F248-11E8-B48F-1D18A9856A87 last_name: Masárová orcid: 0000-0002-6660-1322 - first_name: Tamara full_name: Mchedlidze, Tamara last_name: Mchedlidze - first_name: Maarten full_name: Löffler, Maarten last_name: Löffler - first_name: Günter full_name: Rote, Günter last_name: Rote citation: ama: De Nooijer P, Terziadis S, Weinberger A, et al. Removing popular faces in curve arrangements. Journal of Graph Algorithms and Applications. 2024;28(2):47-82. doi:10.7155/jgaa.v28i2.2988 apa: De Nooijer, P., Terziadis, S., Weinberger, A., Masárová, Z., Mchedlidze, T., Löffler, M., & Rote, G. (2024). Removing popular faces in curve arrangements. Journal of Graph Algorithms and Applications. Brown University. https://doi.org/10.7155/jgaa.v28i2.2988 chicago: De Nooijer, Phoebe, Soeren Terziadis, Alexandra Weinberger, Zuzana Masárová, Tamara Mchedlidze, Maarten Löffler, and Günter Rote. “Removing Popular Faces in Curve Arrangements.” Journal of Graph Algorithms and Applications. Brown University, 2024. https://doi.org/10.7155/jgaa.v28i2.2988. ieee: P. De Nooijer et al., “Removing popular faces in curve arrangements,” Journal of Graph Algorithms and Applications, vol. 28, no. 2. Brown University, pp. 47–82, 2024. ista: De Nooijer P, Terziadis S, Weinberger A, Masárová Z, Mchedlidze T, Löffler M, Rote G. 2024. Removing popular faces in curve arrangements. Journal of Graph Algorithms and Applications. 28(2), 47–82. mla: De Nooijer, Phoebe, et al. “Removing Popular Faces in Curve Arrangements.” Journal of Graph Algorithms and Applications, vol. 28, no. 2, Brown University, 2024, pp. 47–82, doi:10.7155/jgaa.v28i2.2988. short: P. De Nooijer, S. Terziadis, A. Weinberger, Z. Masárová, T. Mchedlidze, M. Löffler, G. Rote, Journal of Graph Algorithms and Applications 28 (2024) 47–82. corr_author: '1' date_created: 2024-12-01T23:01:54Z date_published: 2024-11-03T00:00:00Z date_updated: 2024-12-03T09:49:18Z day: '03' ddc: - '510' department: - _id: UlWa - _id: HeEd doi: 10.7155/jgaa.v28i2.2988 external_id: arxiv: - '2202.12175' file: - access_level: open_access checksum: be611da6f9d790dc980d6fb7283fe889 content_type: application/pdf creator: dernst date_created: 2024-12-03T09:45:00Z date_updated: 2024-12-03T09:45:00Z file_id: '18609' file_name: 2024_JourGraphAlgorithms_deNooijer.pdf file_size: 1582493 relation: main_file success: 1 file_date_updated: 2024-12-03T09:45:00Z has_accepted_license: '1' intvolume: ' 28' issue: '2' language: - iso: eng month: '11' oa: 1 oa_version: Published Version page: 47-82 publication: Journal of Graph Algorithms and Applications publication_identifier: issn: - 1526-1719 publication_status: published publisher: Brown University quality_controlled: '1' scopus_import: '1' status: public title: Removing popular faces in curve arrangements tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87 volume: 28 year: '2024' ... --- OA_type: closed access _id: '18616' abstract: - lang: eng text: By patterning an ultrathin layered structure with tiny wells, physicists have created and imaged peculiar states known as quantum scars — revealing behaviour that could be used to boost the performance of electronic devices. article_processing_charge: No article_type: letter_note author: - first_name: Dmitry full_name: Abanin, Dmitry last_name: Abanin - first_name: Maksym full_name: Serbyn, Maksym id: 47809E7E-F248-11E8-B48F-1D18A9856A87 last_name: Serbyn orcid: 0000-0002-2399-5827 citation: ama: Abanin D, Serbyn M. Quantum scars make their mark in graphene. Nature. 2024;635(8040):825-826. doi:10.1038/d41586-024-03649-y apa: Abanin, D., & Serbyn, M. (2024). Quantum scars make their mark in graphene. Nature. Springer Nature. https://doi.org/10.1038/d41586-024-03649-y chicago: Abanin, Dmitry, and Maksym Serbyn. “Quantum Scars Make Their Mark in Graphene.” Nature. Springer Nature, 2024. https://doi.org/10.1038/d41586-024-03649-y. ieee: D. Abanin and M. Serbyn, “Quantum scars make their mark in graphene,” Nature, vol. 635, no. 8040. Springer Nature, pp. 825–826, 2024. ista: Abanin D, Serbyn M. 2024. Quantum scars make their mark in graphene. Nature. 635(8040), 825–826. mla: Abanin, Dmitry, and Maksym Serbyn. “Quantum Scars Make Their Mark in Graphene.” Nature, vol. 635, no. 8040, Springer Nature, 2024, pp. 825–26, doi:10.1038/d41586-024-03649-y. short: D. Abanin, M. Serbyn, Nature 635 (2024) 825–826. date_created: 2024-12-03T18:08:16Z date_published: 2024-11-27T00:00:00Z date_updated: 2025-09-08T14:57:35Z day: '27' department: - _id: MaSe doi: 10.1038/d41586-024-03649-y external_id: isi: - '001367935000029' pmid: - '39604614' intvolume: ' 635' isi: 1 issue: '8040' language: - iso: eng month: '11' oa_version: None page: 825-826 pmid: 1 publication: Nature publication_identifier: eissn: - 1476-4687 issn: - 0028-0836 publication_status: published publisher: Springer Nature quality_controlled: '1' scopus_import: '1' status: public title: Quantum scars make their mark in graphene type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 635 year: '2024' ... --- OA_place: publisher OA_type: hybrid _id: '18617' abstract: - lang: eng text: "Any complex-valued polynomial on (Rn)k decomposes into an algebraic combination of O(n)-invariant polynomials and harmonic polynomials. This decomposition, separation of variables, is granted to be unique if n≥2k−1. We prove that the condition n≥2k−1 is not only sufficient, but also necessary for uniqueness of the separation. Moreover, we describe the structure of non-uniqueness of the separation in the boundary cases when n=2k−2 and n=2k−3.\r\nFormally, we study the kernel of a multiplication map ϕ carrying out separation of variables. We devise a general algorithmic procedure for describing Ker ϕ in the restricted non-stable range k≤n<2k−1. In the full non-stable range n<2k−1, we give formulas for highest weights of generators of the kernel as well as formulas for its Hilbert series. Using the developed methods, we obtain a list of highest weight vectors generating Ker ϕ." acknowledgement: The author is sincerely grateful for guidance, advice and valuable feedback from Roman Lávička. article_processing_charge: Yes (via OA deal) article_type: original arxiv: 1 author: - first_name: Daniel full_name: Beďatš, Daniel id: 78ea3cc9-31e7-11ee-aa02-a6169bbfe1f1 last_name: Beďatš orcid: 0009-0004-1828-0044 citation: ama: Beďatš D. Separation of variables for scalar-valued polynomials in the non-stable range. Journal of Algebra. 2024;651:281-304. doi:10.1016/j.jalgebra.2024.04.013 apa: Beďatš, D. (2024). Separation of variables for scalar-valued polynomials in the non-stable range. Journal of Algebra. Elsevier. https://doi.org/10.1016/j.jalgebra.2024.04.013 chicago: Beďatš, Daniel. “Separation of Variables for Scalar-Valued Polynomials in the Non-Stable Range.” Journal of Algebra. Elsevier, 2024. https://doi.org/10.1016/j.jalgebra.2024.04.013. ieee: D. Beďatš, “Separation of variables for scalar-valued polynomials in the non-stable range,” Journal of Algebra, vol. 651. Elsevier, pp. 281–304, 2024. ista: Beďatš D. 2024. Separation of variables for scalar-valued polynomials in the non-stable range. Journal of Algebra. 651, 281–304. mla: Beďatš, Daniel. “Separation of Variables for Scalar-Valued Polynomials in the Non-Stable Range.” Journal of Algebra, vol. 651, Elsevier, 2024, pp. 281–304, doi:10.1016/j.jalgebra.2024.04.013. short: D. Beďatš, Journal of Algebra 651 (2024) 281–304. corr_author: '1' date_created: 2024-12-04T07:58:45Z date_published: 2024-08-01T00:00:00Z date_updated: 2025-09-08T14:57:00Z day: '01' ddc: - '510' department: - _id: UlWa doi: 10.1016/j.jalgebra.2024.04.013 external_id: arxiv: - '2309.11154' isi: - '001232775600001' file: - access_level: open_access checksum: 7b01c89128ba16d5334dfab389a03878 content_type: application/pdf creator: dernst date_created: 2024-12-09T13:56:26Z date_updated: 2024-12-09T13:56:26Z file_id: '18638' file_name: 2024_JourAlgebra_Bedats.pdf file_size: 486969 relation: main_file success: 1 file_date_updated: 2024-12-09T13:56:26Z has_accepted_license: '1' intvolume: ' 651' isi: 1 language: - iso: eng month: '08' oa: 1 oa_version: Published Version page: 281-304 publication: Journal of Algebra publication_identifier: issn: - 0021-8693 publication_status: published publisher: Elsevier quality_controlled: '1' scopus_import: '1' status: public title: Separation of variables for scalar-valued polynomials in the non-stable range tmp: image: /images/cc_by.png legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0) short: CC BY (4.0) type: journal_article user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345 volume: 651 year: '2024' ...