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4387 Publications
2022 | Book (Editor) | IST-REx-ID: 11429
Karimipour, F., & Storandt, S. (Eds.). (2022). Web and Wireless Geographical Information Systems (1st ed., Vol. 13238). Cham: Springer Nature. https://doi.org/10.1007/978-3-031-06245-2
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2022 | Book Chapter | IST-REx-ID: 11440 |

Bleile, B., Garin, A., Heiss, T., Maggs, K., & Robins, V. (2022). The persistent homology of dual digital image constructions. In E. Gasparovic, V. Robins, & K. Turner (Eds.), Research in Computational Topology 2 (1st ed., Vol. 30, pp. 1–26). Cham: Springer Nature. https://doi.org/10.1007/978-3-030-95519-9_1
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2022 | Journal Article | IST-REx-ID: 11438 |

Li, V., Diorico, F. R., & Hosten, O. (2022). Laser frequency-offset locking at 10-Hz-level instability using hybrid electronic filters. Physical Review Applied. American Physical Society. https://doi.org/10.1103/physrevapplied.17.054031
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2022 | Journal Article | IST-REx-ID: 11435 |

Ivanov, G., & Naszodi, M. (2022). A quantitative Helly-type theorem: Containment in a homothet. SIAM Journal on Discrete Mathematics. SIAM. https://doi.org/10.1137/21M1403308
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2022 | Journal Article | IST-REx-ID: 11448 |

Gonzalez Somermeyer, L., Fleiss, A., Mishin, A. S., Bozhanova, N. G., Igolkina, A. A., Meiler, J., … Kondrashov, F. (2022). Heterogeneity of the GFP fitness landscape and data-driven protein design. ELife. eLife Sciences Publications. https://doi.org/10.7554/elife.75842
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2022 | Journal Article | IST-REx-ID: 11447 |

Saona Urmeneta, R. J., Kondrashov, F., & Khudiakova, K. (2022). Relation between the number of peaks and the number of reciprocal sign epistatic interactions. Bulletin of Mathematical Biology. Springer Nature. https://doi.org/10.1007/s11538-022-01029-z
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2022 | Journal Article | IST-REx-ID: 11449 |

Anderson, D. J., Pauler, F., Mckenna, A., Shendure, J., Hippenmeyer, S., & Horwitz, M. S. (2022). Simultaneous brain cell type and lineage determined by scRNA-seq reveals stereotyped cortical development. Cell Systems. Elsevier. https://doi.org/10.1016/j.cels.2022.03.006
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2022 | Journal Article | IST-REx-ID: 11443 |

Kwan, M. A., Sauermann, L., & Zhao, Y. (2022). Extension complexity of low-dimensional polytopes. Transactions of the American Mathematical Society. American Mathematical Society. https://doi.org/10.1090/tran/8614
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2022 | Journal Article | IST-REx-ID: 11444 |

Chlebak, C. A., & Reid, P. H. (2022). From the prefect’s desk: Gerard van Swieten’s library correspondence. Library and Information History. Edinburgh University Press. https://doi.org/10.3366/lih.2022.0097
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2022 | Conference Paper | IST-REx-ID: 11459 |

Zikelic, D., Chang, B.-Y. E., Bolignano, P., & Raimondi, F. (2022). Differential cost analysis with simultaneous potentials and anti-potentials. In Proceedings of the 43rd ACM SIGPLAN International Conference on Programming Language Design and Implementation (pp. 442–457). San Diego, CA, United States: Association for Computing Machinery. https://doi.org/10.1145/3519939.3523435
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2022 | Book Chapter | IST-REx-ID: 11456
Artan, M., & de Bono, M. (2022). Proteomic Analysis of C. Elegans Neurons Using TurboID-Based Proximity Labeling. In D. Yamamoto (Ed.), Behavioral Neurogenetics (Vol. 181, pp. 277–294). New York: Springer Nature. https://doi.org/10.1007/978-1-0716-2321-3_15
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2022 | Journal Article | IST-REx-ID: 11460 |

Schaaf, Z. A., Tat, L., Cannizzaro, N., Green, R., Rülicke, T., Hippenmeyer, S., & Zarbalis, K. S. (2022). WDFY3 mutation alters laminar position and morphology of cortical neurons. Molecular Autism. Springer Nature. https://doi.org/10.1186/s13229-022-00508-3
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2022 | Journal Article | IST-REx-ID: 11471 |

Sack, S., Medina Ramos, R. A., Michailidis, A., Kueng, R., & Serbyn, M. (2022). Avoiding barren plateaus using classical shadows. PRX Quantum. American Physical Society. https://doi.org/10.1103/prxquantum.3.020365
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| arXiv
2022 | Journal Article | IST-REx-ID: 11462
Dormeshkin, D., Shapira, M., Karputs, A., Kavaleuski, A., Kuzminski, I., Stepanova, E., & Gilep, A. (2022). Combining of synthetic VHH and immune scFv libraries for pregnancy-associated glycoproteins ELISA development. Applied Microbiology and Biotechnology. Springer Nature. https://doi.org/10.1007/s00253-022-12022-w
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2022 | Conference Paper | IST-REx-ID: 11476 |

Alwen, J., Auerbach, B., Cueto Noval, M., Klein, K., Pascual Perez, G., Pietrzak, K. Z., & Walter, M. (2022). CoCoA: Concurrent continuous group key agreement. In Advances in Cryptology – EUROCRYPT 2022 (Vol. 13276, pp. 815–844). Cham: Springer Nature. https://doi.org/10.1007/978-3-031-07085-3_28
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2022 | Journal Article | IST-REx-ID: 10564 |

Mysliwy, K., & Seiringer, R. (2022). Polaron models with regular interactions at strong coupling. Journal of Statistical Physics. Springer Nature. https://doi.org/10.1007/s10955-021-02851-w
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| arXiv
2022 | Journal Article | IST-REx-ID: 11489 |

Bilanovičová, V., Rýdza, N., Koczka, L., Hess, M., Feraru, E., Friml, J., & Nodzyński, T. (2022). The hydrophilic loop of Arabidopsis PIN1 auxin efflux carrier harbors hallmarks of an intrinsically disordered protein. International Journal of Molecular Sciences. MDPI. https://doi.org/10.3390/ijms23116352
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2022 | Journal Article | IST-REx-ID: 11546 |

Westram, A. M., Faria, R., Johannesson, K., Butlin, R., & Barton, N. H. (2022). Inversions and parallel evolution. Philosophical Transactions of the Royal Society B: Biological Sciences. Royal Society of London. https://doi.org/10.1098/rstb.2021.0203
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2022 | Journal Article | IST-REx-ID: 11545 |

Brown, A., & Romanov, A. (2022). Contravariant pairings between standard Whittaker modules and Verma modules. Journal of Algebra. Elsevier. https://doi.org/10.1016/j.jalgebra.2022.06.017
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2022 | Journal Article | IST-REx-ID: 11553 |

Clark, T., Drach, K., Kozlovski, O., & Strien, S. V. (2022). The dynamics of complex box mappings. Arnold Mathematical Journal. Springer Nature. https://doi.org/10.1007/s40598-022-00200-7
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2022 | Journal Article | IST-REx-ID: 11551 |

Molina-Granada, D., González-Vioque, E., Dibley, M. G., Cabrera-Pérez, R., Vallbona-Garcia, A., Torres-Torronteras, J., … Martí, R. (2022). Most mitochondrial dGTP is tightly bound to respiratory complex I through the NDUFA10 subunit. Communications Biology. Springer Nature. https://doi.org/10.1038/s42003-022-03568-6
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2022 | Journal Article | IST-REx-ID: 11552 |

Qiang, J., Zhou, L., Lu, P., Lin, K., Ma, Y., Pan, S., … Wu, J. (2022). Femtosecond rotational dynamics of D2 molecules in superfluid helium nanodroplets. Physical Review Letters. American Physical Society. https://doi.org/10.1103/PhysRevLett.128.243201
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2022 | Journal Article | IST-REx-ID: 11556 |

Kalinov, A., Osinskiy, A. I., Matveev, S. A., Otieno, W., & Brilliantov, N. V. (2022). Direct simulation Monte Carlo for new regimes in aggregation-fragmentation kinetics. Journal of Computational Physics. Elsevier. https://doi.org/10.1016/j.jcp.2022.111439
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2022 | Journal Article | IST-REx-ID: 11587 |

Zhang R, Kuo R, Coulter M, Calixto CPG, Entizne JC, Guo W, Marquez Y, Milne L, Riegler S, Matsui A, Tanaka M, Harvey S, Gao Y, Wießner-Kroh T, Paniagua A, Crespi M, Denby K, Hur AB, Huq E, Jantsch M, Jarmolowski A, Koester T, Laubinger S, Li QQ, Gu L, Seki M, Staiger D, Sunkar R, Szweykowska-Kulinska Z, Tu SL, Wachter A, Waugh R, Xiong L, Zhang XN, Conesa A, Reddy ASN, Barta A, Kalyna M, Brown JWS. 2022. A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis. Genome Biology. 23, 149.
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2022 | Journal Article | IST-REx-ID: 11588 |

Nicolai, L., Kaiser, R., Escaig, R., Hoffknecht, M. L., Anjum, A., Leunig, A., … Gärtner, F. R. (2022). Single platelet and megakaryocyte morpho-dynamics uncovered by multicolor reporter mouse strains in vitro and in vivo. Haematologica. Ferrata Storti Foundation. https://doi.org/10.3324/haematol.2021.278896
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2022 | Journal Article | IST-REx-ID: 11589 |

Wang, R., Himschoot, E., Chen, J., Boudsocq, M., Geelen, D., Friml, J., … Vanneste, S. (2022). Constitutive active CPK30 interferes with root growth and endomembrane trafficking in Arabidopsis thaliana. Frontiers in Plant Science. Frontiers. https://doi.org/10.3389/fpls.2022.862398
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2022 | Journal Article | IST-REx-ID: 11590 |

Brauneis, F., Backert, T. G., Mistakidis, S. I., Lemeshko, M., Hammer, H. W., & Volosniev, A. (2022). Artificial atoms from cold bosons in one dimension. New Journal of Physics. IOP Publishing. https://doi.org/10.1088/1367-2630/ac78d8
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2022 | Journal Article | IST-REx-ID: 11591 |

Agustí, J., Minoguchi, Y., Fink, J. M., & Rabl, P. (2022). Long-distance distribution of qubit-qubit entanglement using Gaussian-correlated photonic beams. Physical Review A. American Physical Society. https://doi.org/10.1103/PhysRevA.105.062454
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| arXiv
2022 | Journal Article | IST-REx-ID: 11592 |

Bighin, G., Cappellaro, A., & Salasnich, L. (2022). Unitary Fermi superfluid near the critical temperature: Thermodynamics and sound modes from elementary excitations. Physical Review A. American Physical Society. https://doi.org/10.1103/PhysRevA.105.063329
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2022 | Journal Article | IST-REx-ID: 10411
Li, L., Gallei, M. C., & Friml, J. (2022). Bending to auxin: Fast acid growth for tropisms. Trends in Plant Science. Cell Press. https://doi.org/10.1016/j.tplants.2021.11.006
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2022 | Journal Article | IST-REx-ID: 11637 |

Zhao, L., Fenk, L. A., Nilsson, L., Amin-Wetzel, N. P., Ramirez, N., de Bono, M., & Chen, C. (2022). ROS and cGMP signaling modulate persistent escape from hypoxia in Caenorhabditis elegans. PLoS Biology. Public Library of Science. https://doi.org/10.1371/journal.pbio.3001684
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2022 | Journal Article | IST-REx-ID: 11638 |

Ngampruetikorn, V., Sachdeva, V., Torrence, J., Humplik, J., Schwab, D. J., & Palmer, S. E. (2022). Inferring couplings in networks across order-disorder phase transitions. Physical Review Research. American Physical Society. https://doi.org/10.1103/PhysRevResearch.4.023240
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2022 | Journal Article | IST-REx-ID: 11636 |

Kmentt, P., & Shute, A. L. (2022). The Bertini irreducibility theorem for higher codimensional slices. Finite Fields and Their Applications. Elsevier. https://doi.org/10.1016/j.ffa.2022.102085
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| arXiv
2022 | Journal Article | IST-REx-ID: 11639 |

Zhang, Y., & Vatedka, S. (2022). List decoding random Euclidean codes and Infinite constellations. IEEE Transactions on Information Theory. IEEE. https://doi.org/10.1109/TIT.2022.3189542
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| arXiv
2022 | Journal Article | IST-REx-ID: 11640 |

Szep, E., Trubenova, B., & Csilléry, K. (2022). Using gridCoal to assess whether standard population genetic theory holds in the presence of spatio-temporal heterogeneity in population size. Molecular Ecology Resources. Wiley. https://doi.org/10.1111/1755-0998.13676
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2022 | Journal Article | IST-REx-ID: 11648 |

Gerle, C., Kishikawa, J., Yamaguchi, T., Nakanishi, A., Çoruh, M. O., Makino, F., … Kato, T. (2022). Structures of multisubunit membrane complexes with the CRYO ARM 200. Microscopy. Oxford University Press. https://doi.org/10.1093/jmicro/dfac037
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2022 | Journal Article | IST-REx-ID: 11658 |

Biswas, R., Cultrera di Montesano, S., Edelsbrunner, H., & Saghafian, M. (n.d.). Depth in arrangements: Dehn–Sommerville–Euler relations with applications. Leibniz International Proceedings on Mathematics. Schloss Dagstuhl - Leibniz Zentrum für Informatik.
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2022 | Journal Article | IST-REx-ID: 11660 |

Biswas, R., Cultrera di Montesano, S., Edelsbrunner, H., & Saghafian, M. (n.d.). A window to the persistence of 1D maps. I: Geometric characterization of critical point pairs. LIPIcs. Schloss Dagstuhl - Leibniz-Zentrum für Informatik.
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2022 | Journal Article | IST-REx-ID: 10604 |

Turelli, M., & Barton, N. H. (2022). Why did the Wolbachia transinfection cross the road? Drift, deterministic dynamics, and disease control. Evolution Letters. Wiley. https://doi.org/10.1002/evl3.270
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2022 | Research Data Reference | IST-REx-ID: 11686 |

Turelli, M., & Barton, N. H. (2022). Wolbachia frequency data from: Why did the Wolbachia transinfection cross the road? Drift, deterministic dynamics and disease control. Dryad. https://doi.org/10.25338/B81931
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2022 | Journal Article | IST-REx-ID: 11451 |

Parvizian, M., Duràn Balsa, A., Pokratath, R., Kalha, C., Lee, S., Van Den Eynden, D., … De Roo, J. (2022). The chemistry of Cu₃N and Cu₃PdN nanocrystals. Angewandte Chemie - International Edition. Wiley. https://doi.org/10.1002/anie.202207013
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2022 | Journal Article | IST-REx-ID: 11700 |

Erbar, M., Forkert, D. L., Maas, J., & Mugnolo, D. (2022). Gradient flow formulation of diffusion equations in the Wasserstein space over a metric graph. Networks and Heterogeneous Media. American Institute of Mathematical Sciences. https://doi.org/10.3934/nhm.2022023
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2022 | Research Data Reference | IST-REx-ID: 11695 |

Parvizian, M., Duran Balsa, A., Pokratath, R., Kalha, C., Lee, S., Van den Eynden, D., … De Roo, J. (2022). Data for “The chemistry of Cu3N and Cu3PdN nanocrystals.” Zenodo. https://doi.org/10.5281/ZENODO.6542908
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2022 | Journal Article | IST-REx-ID: 11705 |

Chang, C., Liu, Y., Lee, S., Spadaro, M., Koskela, K. M., Kleinhanns, T., … Ibáñez, M. (2022). Surface functionalization of surfactant-free particles: A strategy to tailor the properties of nanocomposites for enhanced thermoelectric performance. Angewandte Chemie - International Edition. Wiley. https://doi.org/10.1002/anie.202207002
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2022 | Journal Article | IST-REx-ID: 11703 |

Toups, M. A., Vicoso, B., & Pannell, J. R. (2022). Dioecy and chromosomal sex determination are maintained through allopolyploid speciation in the plant genus Mercurialis. PLoS Genetics. Public Library of Science. https://doi.org/10.1371/journal.pgen.1010226
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2022 | Conference Paper | IST-REx-ID: 11707 |

Balliu, A., Hirvonen, J., Melnyk, D., Olivetti, D., Rybicki, J., & Suomela, J. (2022). Local mending. In M. Parter (Ed.), International Colloquium on Structural Information and Communication Complexity (Vol. 13298, pp. 1–20). Paderborn, Germany: Springer Nature. https://doi.org/10.1007/978-3-031-09993-9_1
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2022 | Journal Article | IST-REx-ID: 11701 |

Agresti, A., & Veraar, M. (2022). Nonlinear parabolic stochastic evolution equations in critical spaces Part I. Stochastic maximal regularity and local existence. Nonlinearity. IOP Publishing. https://doi.org/10.1088/1361-6544/abd613
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2022 | Journal Article | IST-REx-ID: 11702 |

Barton, N. H. (2022). The “New Synthesis.” Proceedings of the National Academy of Sciences of the United States of America. Proceedings of the National Academy of Sciences. https://doi.org/10.1073/pnas.2122147119
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2022 | Journal Article | IST-REx-ID: 11706 |

Liebenau, A., Mattos, L., Mendonca dos Santos, W., & Skokan, J. (2022). Asymmetric Ramsey properties of random graphs involving cliques and cycles. Random Structures and Algorithms. Wiley. https://doi.org/10.1002/rsa.21106
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2022 | Journal Article | IST-REx-ID: 11723 |

Li, L., Chen, H., Alotaibi, S. S., Pěnčík, A., Adamowski, M., Novák, O., & Friml, J. (2022). RALF1 peptide triggers biphasic root growth inhibition upstream of auxin biosynthesis. Proceedings of the National Academy of Sciences. Proceedings of the National Academy of Sciences. https://doi.org/10.1073/pnas.2121058119
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