[{"external_id":{"isi":["000619676100035"],"arxiv":["1910.10447"]},"fulldoi":"https://doi.org/10.1016/j.aim.2021.107595","department":[{"_id":"LaEr"}],"publication_status":"published","oa_version":"Preprint","article_processing_charge":"No","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","article_number":"107595","date_updated":"2025-04-14T07:50:40Z","ec_funded":1,"main_file_link":[{"url":"https://arxiv.org/abs/1910.10447","open_access":"1"}],"keyword":["General Mathematics"],"day":"26","type":"journal_article","citation":{"short":"D. Virosztek, Advances in Mathematics 380 (2021).","mla":"Virosztek, Daniel. “The Metric Property of the Quantum Jensen-Shannon Divergence.” <i>Advances in Mathematics</i>, vol. 380, no. 3, 107595, Elsevier, 2021, doi:<a href=\"https://doi.org/10.1016/j.aim.2021.107595\">10.1016/j.aim.2021.107595</a>.","chicago":"Virosztek, Daniel. “The Metric Property of the Quantum Jensen-Shannon Divergence.” <i>Advances in Mathematics</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.aim.2021.107595\">https://doi.org/10.1016/j.aim.2021.107595</a>.","apa":"Virosztek, D. (2021). The metric property of the quantum Jensen-Shannon divergence. <i>Advances in Mathematics</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.aim.2021.107595\">https://doi.org/10.1016/j.aim.2021.107595</a>","ista":"Virosztek D. 2021. The metric property of the quantum Jensen-Shannon divergence. Advances in Mathematics. 380(3), 107595.","ama":"Virosztek D. The metric property of the quantum Jensen-Shannon divergence. <i>Advances in Mathematics</i>. 2021;380(3). doi:<a href=\"https://doi.org/10.1016/j.aim.2021.107595\">10.1016/j.aim.2021.107595</a>","ieee":"D. Virosztek, “The metric property of the quantum Jensen-Shannon divergence,” <i>Advances in Mathematics</i>, vol. 380, no. 3. Elsevier, 2021."},"month":"03","doi":"10.1016/j.aim.2021.107595","publication_identifier":{"issn":["0001-8708"]},"year":"2021","status":"public","acknowledgement":"D. Virosztek was supported by the European Union's Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 846294, and partially supported by the Hungarian National Research, Development and Innovation Office (NKFIH) via grants no. K124152, and no. KH129601.","abstract":[{"lang":"eng","text":"In this short note, we prove that the square root of the quantum Jensen-Shannon divergence is a true metric on the cone of positive matrices, and hence in particular on the quantum state space."}],"issue":"3","title":"The metric property of the quantum Jensen-Shannon divergence","author":[{"full_name":"Virosztek, Daniel","orcid":"0000-0003-1109-5511","first_name":"Daniel","last_name":"Virosztek","id":"48DB45DA-F248-11E8-B48F-1D18A9856A87"}],"volume":380,"quality_controlled":"1","date_published":"2021-03-26T00:00:00Z","arxiv":1,"language":[{"iso":"eng"}],"publisher":"Elsevier","isi":1,"intvolume":"       380","scopus_import":"1","publication":"Advances in Mathematics","_id":"9036","project":[{"name":"Geometric study of Wasserstein spaces and free probability","call_identifier":"H2020","grant_number":"846294","_id":"26A455A6-B435-11E9-9278-68D0E5697425"}],"article_type":"original","date_created":"2021-01-22T17:55:17Z","oa":1},{"department":[{"_id":"UlWa"}],"publication_status":"published","external_id":{"arxiv":["1912.08561"],"isi":["000607265100001"]},"fulldoi":"https://doi.org/10.1112/blms.12449","date_updated":"2025-07-10T12:01:31Z","oa_version":"Published Version","article_processing_charge":"Yes (via OA deal)","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","citation":{"ama":"Ivanov G. No-dimension Tverberg’s theorem and its corollaries in Banach spaces of type p. <i>Bulletin of the London Mathematical Society</i>. 2021;53(2):631-641. doi:<a href=\"https://doi.org/10.1112/blms.12449\">10.1112/blms.12449</a>","ieee":"G. Ivanov, “No-dimension Tverberg’s theorem and its corollaries in Banach spaces of type p,” <i>Bulletin of the London Mathematical Society</i>, vol. 53, no. 2. London Mathematical Society, pp. 631–641, 2021.","ista":"Ivanov G. 2021. No-dimension Tverberg’s theorem and its corollaries in Banach spaces of type p. Bulletin of the London Mathematical Society. 53(2), 631–641.","apa":"Ivanov, G. (2021). No-dimension Tverberg’s theorem and its corollaries in Banach spaces of type p. <i>Bulletin of the London Mathematical Society</i>. London Mathematical Society. <a href=\"https://doi.org/10.1112/blms.12449\">https://doi.org/10.1112/blms.12449</a>","chicago":"Ivanov, Grigory. “No-Dimension Tverberg’s Theorem and Its Corollaries in Banach Spaces of Type P.” <i>Bulletin of the London Mathematical Society</i>. London Mathematical Society, 2021. <a href=\"https://doi.org/10.1112/blms.12449\">https://doi.org/10.1112/blms.12449</a>.","mla":"Ivanov, Grigory. “No-Dimension Tverberg’s Theorem and Its Corollaries in Banach Spaces of Type P.” <i>Bulletin of the London Mathematical Society</i>, vol. 53, no. 2, London Mathematical Society, 2021, pp. 631–41, doi:<a href=\"https://doi.org/10.1112/blms.12449\">10.1112/blms.12449</a>.","short":"G. Ivanov, Bulletin of the London Mathematical Society 53 (2021) 631–641."},"month":"04","license":"https://creativecommons.org/licenses/by-nc-nd/4.0/","type":"journal_article","day":"01","file_date_updated":"2021-08-06T09:59:45Z","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)"},"issue":"2","abstract":[{"lang":"eng","text":"We continue our study of ‘no‐dimension’ analogues of basic theorems in combinatorial and convex geometry in Banach spaces. We generalize some results of the paper (Adiprasito, Bárány and Mustafa, ‘Theorems of Carathéodory, Helly, and Tverberg without dimension’, Proceedings of the Thirtieth Annual ACM‐SIAM Symposium on Discrete Algorithms (Society for Industrial and Applied Mathematics, San Diego, California, 2019) 2350–2360) and prove no‐dimension versions of the colored Tverberg theorem, the selection lemma and the weak  𝜀 ‐net theorem in Banach spaces of type  𝑝>1 . To prove these results, we use the original ideas of Adiprasito, Bárány and Mustafa for the Euclidean case, our no‐dimension version of the Radon theorem and slightly modified version of the celebrated Maurey lemma."}],"publication_identifier":{"eissn":["1469-2120"],"issn":["0024-6093"]},"doi":"10.1112/blms.12449","acknowledgement":"I wish to thank Imre Bárány for bringing the problem to my attention. I am grateful to Marton Naszódi and Igor Tsiutsiurupa for useful remarks and help with the text.\r\nThe author acknowledges the financial support from the Ministry of Educational and Science of the Russian Federation in the framework of MegaGrant no 075‐15‐2019‐1926.","status":"public","year":"2021","quality_controlled":"1","volume":53,"title":"No-dimension Tverberg's theorem and its corollaries in Banach spaces of type p","author":[{"first_name":"Grigory","last_name":"Ivanov","id":"87744F66-5C6F-11EA-AFE0-D16B3DDC885E","full_name":"Ivanov, Grigory"}],"language":[{"iso":"eng"}],"arxiv":1,"date_published":"2021-04-01T00:00:00Z","file":[{"checksum":"e6ceaa6470d835eb4c211cbdd38fdfd1","access_level":"open_access","file_id":"9796","relation":"main_file","file_size":194550,"success":1,"date_updated":"2021-08-06T09:59:45Z","date_created":"2021-08-06T09:59:45Z","content_type":"application/pdf","creator":"kschuh","file_name":"2021_BLMS_Ivanov.pdf"}],"isi":1,"publisher":"London Mathematical Society","has_accepted_license":"1","article_type":"original","oa":1,"date_created":"2021-01-24T23:01:08Z","publication":"Bulletin of the London Mathematical Society","scopus_import":"1","intvolume":"        53","ddc":["510"],"page":"631-641","_id":"9037"},{"language":[{"iso":"eng"}],"file":[{"file_name":"2021_PlosPathogens_Roemhild.pdf","creator":"dernst","content_type":"application/pdf","date_updated":"2021-02-03T12:13:03Z","date_created":"2021-02-03T12:13:03Z","file_size":570066,"success":1,"file_id":"9070","relation":"main_file","access_level":"open_access","checksum":"d745d7f8fcbb9b95fea16a36f94dee31"}],"date_published":"2021-01-14T00:00:00Z","volume":17,"quality_controlled":"1","pmid":1,"title":"Mechanisms and therapeutic potential of collateral sensitivity to antibiotics","author":[{"first_name":"Roderich","last_name":"Römhild","id":"68E56E44-62B0-11EA-B963-444F3DDC885E","full_name":"Römhild, Roderich","orcid":"0000-0001-9480-5261"},{"full_name":"Andersson, Dan I.","first_name":"Dan I.","last_name":"Andersson"}],"article_type":"original","has_accepted_license":"1","date_created":"2021-01-31T23:01:21Z","oa":1,"intvolume":"        17","scopus_import":"1","publication":"PLoS Pathogens","_id":"9046","ddc":["570"],"isi":1,"publisher":"Public Library of Science","article_number":"e1009172","date_updated":"2025-07-10T12:01:33Z","article_processing_charge":"No","oa_version":"Published Version","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","department":[{"_id":"CaGu"}],"publication_status":"published","external_id":{"pmid":["33444399"],"isi":["000610190400007"]},"fulldoi":"https://doi.org/10.1371/journal.ppat.1009172","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)"},"issue":"1","publication_identifier":{"eissn":["1553-7374"],"issn":["1553-7366"]},"doi":"10.1371/journal.ppat.1009172","year":"2021","acknowledgement":"Our work was supported by the Swedish Research Council (grant 2017-01527) to DIA","status":"public","citation":{"short":"R. Römhild, D.I. Andersson, PLoS Pathogens 17 (2021).","chicago":"Römhild, Roderich, and Dan I. Andersson. “Mechanisms and Therapeutic Potential of Collateral Sensitivity to Antibiotics.” <i>PLoS Pathogens</i>. Public Library of Science, 2021. <a href=\"https://doi.org/10.1371/journal.ppat.1009172\">https://doi.org/10.1371/journal.ppat.1009172</a>.","mla":"Römhild, Roderich, and Dan I. Andersson. “Mechanisms and Therapeutic Potential of Collateral Sensitivity to Antibiotics.” <i>PLoS Pathogens</i>, vol. 17, no. 1, e1009172, Public Library of Science, 2021, doi:<a href=\"https://doi.org/10.1371/journal.ppat.1009172\">10.1371/journal.ppat.1009172</a>.","ieee":"R. Römhild and D. I. Andersson, “Mechanisms and therapeutic potential of collateral sensitivity to antibiotics,” <i>PLoS Pathogens</i>, vol. 17, no. 1. Public Library of Science, 2021.","ista":"Römhild R, Andersson DI. 2021. Mechanisms and therapeutic potential of collateral sensitivity to antibiotics. PLoS Pathogens. 17(1), e1009172.","apa":"Römhild, R., &#38; Andersson, D. I. (2021). Mechanisms and therapeutic potential of collateral sensitivity to antibiotics. <i>PLoS Pathogens</i>. Public Library of Science. <a href=\"https://doi.org/10.1371/journal.ppat.1009172\">https://doi.org/10.1371/journal.ppat.1009172</a>","ama":"Römhild R, Andersson DI. Mechanisms and therapeutic potential of collateral sensitivity to antibiotics. <i>PLoS Pathogens</i>. 2021;17(1). doi:<a href=\"https://doi.org/10.1371/journal.ppat.1009172\">10.1371/journal.ppat.1009172</a>"},"month":"01","file_date_updated":"2021-02-03T12:13:03Z","day":"14","type":"journal_article"},{"project":[{"_id":"260C2330-B435-11E9-9278-68D0E5697425","grant_number":"754411","call_identifier":"H2020","name":"ISTplus - Postdoctoral Fellowships"},{"call_identifier":"H2020","name":"Non-Ergodic Quantum Matter: Universality, Dynamics and Control","_id":"23841C26-32DE-11EA-91FC-C7463DDC885E","grant_number":"850899"}],"article_type":"original","has_accepted_license":"1","date_created":"2021-02-01T09:20:00Z","oa":1,"intvolume":"       126","scopus_import":"1","publication":"Physical Review Letters","_id":"9048","ddc":["530"],"isi":1,"publisher":"American Physical Society","arxiv":1,"language":[{"iso":"eng"}],"file":[{"checksum":"d9acbc502390ed7a97e631d23ae19ecd","access_level":"open_access","relation":"main_file","file_id":"9074","file_size":398075,"success":1,"date_updated":"2021-02-03T12:47:04Z","date_created":"2021-02-03T12:47:04Z","content_type":"application/pdf","creator":"dernst","file_name":"2021_PhysicalRevLett_DeNicola.pdf"}],"date_published":"2021-01-29T00:00:00Z","volume":126,"quality_controlled":"1","author":[{"full_name":"De Nicola, Stefano","orcid":"0000-0002-4842-6671","first_name":"Stefano","last_name":"De Nicola","id":"42832B76-F248-11E8-B48F-1D18A9856A87"},{"id":"36EBAD38-F248-11E8-B48F-1D18A9856A87","last_name":"Michailidis","first_name":"Alexios","orcid":"0000-0002-8443-1064","full_name":"Michailidis, Alexios"},{"id":"47809E7E-F248-11E8-B48F-1D18A9856A87","last_name":"Serbyn","first_name":"Maksym","orcid":"0000-0002-2399-5827","full_name":"Serbyn, Maksym"}],"title":"Entanglement view of dynamical quantum phase transitions","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"lang":"eng","text":"The analogy between an equilibrium partition function and the return probability in many-body unitary dynamics has led to the concept of dynamical quantum phase transition (DQPT). DQPTs are defined by nonanalyticities in the return amplitude and are present in many models. In some cases, DQPTs can be related to equilibrium concepts, such as order parameters, yet their universal description is an open question. In this Letter, we provide first steps toward a classification of DQPTs by using a matrix product state description of unitary dynamics in the thermodynamic limit. This allows us to distinguish the two limiting cases of “precession” and “entanglement” DQPTs, which are illustrated using an analytical description in the quantum Ising model. While precession DQPTs are characterized by a large entanglement gap and are semiclassical in their nature, entanglement DQPTs occur near avoided crossings in the entanglement spectrum and can be distinguished by a complex pattern of nonlocal correlations. We demonstrate the existence of precession and entanglement DQPTs beyond Ising models, discuss observables that can distinguish them, and relate their interplay to complex DQPT phenomenology."}],"issue":"4","doi":"10.1103/physrevlett.126.040602","publication_identifier":{"issn":["0031-9007"],"eissn":["1079-7114"]},"year":"2021","acknowledgement":"S. D. N. acknowledges funding from the Institute of Science and Technology (IST) Austria and from the European Union’s Horizon 2020 Research and Innovation Programme under the Marie Skłodowska-Curie Grant Agreement No. 754411. A. M. and M. S. were supported by the European Research Council (ERC) under the European Union’s Horizon 2020 Research and\r\nInnovation Programme (Grant Agreement No. 850899).","status":"public","citation":{"ama":"De Nicola S, Michailidis A, Serbyn M. Entanglement view of dynamical quantum phase transitions. <i>Physical Review Letters</i>. 2021;126(4). doi:<a href=\"https://doi.org/10.1103/physrevlett.126.040602\">10.1103/physrevlett.126.040602</a>","ieee":"S. De Nicola, A. Michailidis, and M. Serbyn, “Entanglement view of dynamical quantum phase transitions,” <i>Physical Review Letters</i>, vol. 126, no. 4. American Physical Society, 2021.","apa":"De Nicola, S., Michailidis, A., &#38; Serbyn, M. (2021). Entanglement view of dynamical quantum phase transitions. <i>Physical Review Letters</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevlett.126.040602\">https://doi.org/10.1103/physrevlett.126.040602</a>","ista":"De Nicola S, Michailidis A, Serbyn M. 2021. Entanglement view of dynamical quantum phase transitions. Physical Review Letters. 126(4), 040602.","short":"S. De Nicola, A. Michailidis, M. Serbyn, Physical Review Letters 126 (2021).","chicago":"De Nicola, Stefano, Alexios Michailidis, and Maksym Serbyn. “Entanglement View of Dynamical Quantum Phase Transitions.” <i>Physical Review Letters</i>. American Physical Society, 2021. <a href=\"https://doi.org/10.1103/physrevlett.126.040602\">https://doi.org/10.1103/physrevlett.126.040602</a>.","mla":"De Nicola, Stefano, et al. “Entanglement View of Dynamical Quantum Phase Transitions.” <i>Physical Review Letters</i>, vol. 126, no. 4, 040602, American Physical Society, 2021, doi:<a href=\"https://doi.org/10.1103/physrevlett.126.040602\">10.1103/physrevlett.126.040602</a>."},"month":"01","ec_funded":1,"file_date_updated":"2021-02-03T12:47:04Z","type":"journal_article","keyword":["General Physics and Astronomy"],"day":"29","article_number":"040602","date_updated":"2025-04-14T07:43:50Z","oa_version":"Published Version","article_processing_charge":"Yes","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","department":[{"_id":"MaSe"}],"publication_status":"published","external_id":{"isi":["000613148200001"],"arxiv":["2008.04894"]},"fulldoi":"https://doi.org/10.1103/physrevlett.126.040602"},{"date_updated":"2026-04-08T07:01:30Z","article_processing_charge":"No","oa_version":"Published Version","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","department":[{"_id":"HeEd"},{"_id":"GradSch"}],"publication_status":"published","fulldoi":"https://doi.org/10.15479/AT:ISTA:9056","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)"},"abstract":[{"text":"In this thesis we study persistence of multi-covers of Euclidean balls and the geometric structures underlying their computation, in particular Delaunay mosaics and Voronoi tessellations. The k-fold cover for some discrete input point set consists of the space where at least k balls of radius r around the input points overlap. Persistence is a notion that captures, in some sense, the topology of the shape underlying the input. While persistence is usually computed for the union of balls, the k-fold cover is of interest as it captures local density,\r\nand thus might approximate the shape of the input better if the input data is noisy. To compute persistence of these k-fold covers, we need a discretization that is provided by higher-order Delaunay mosaics. We present and implement a simple and efficient algorithm for the computation of higher-order Delaunay mosaics, and use it to give experimental results for their combinatorial properties. The algorithm makes use of a new geometric structure, the rhomboid tiling. It contains the higher-order Delaunay mosaics as slices, and by introducing a filtration\r\nfunction on the tiling, we also obtain higher-order α-shapes as slices. These allow us to compute persistence of the multi-covers for varying radius r; the computation for varying k is less straight-foward and involves the rhomboid tiling directly. We apply our algorithms to experimental sphere packings to shed light on their structural properties. Finally, inspired by periodic structures in packings and materials, we propose and implement an algorithm for periodic Delaunay triangulations to be integrated into the Computational Geometry Algorithms Library (CGAL), and discuss the implications on persistence for periodic data sets.","lang":"eng"}],"publication_identifier":{"issn":["2663-337X"]},"doi":"10.15479/AT:ISTA:9056","status":"public","year":"2021","citation":{"apa":"Osang, G. F. (2021). <i>Multi-cover persistence and Delaunay mosaics</i>. Institute of Science and Technology Austria, Klosterneuburg. <a href=\"https://doi.org/10.15479/AT:ISTA:9056\">https://doi.org/10.15479/AT:ISTA:9056</a>","ista":"Osang GF. 2021. Multi-cover persistence and Delaunay mosaics. Klosterneuburg: Institute of Science and Technology Austria.","ama":"Osang GF. Multi-cover persistence and Delaunay mosaics. 2021. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:9056\">10.15479/AT:ISTA:9056</a>","ieee":"G. F. Osang, “Multi-cover persistence and Delaunay mosaics,” Institute of Science and Technology Austria, Klosterneuburg, 2021.","mla":"Osang, Georg F. <i>Multi-Cover Persistence and Delaunay Mosaics</i>. Institute of Science and Technology Austria, 2021, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:9056\">10.15479/AT:ISTA:9056</a>.","chicago":"Osang, Georg F. “Multi-Cover Persistence and Delaunay Mosaics.” Institute of Science and Technology Austria, 2021. <a href=\"https://doi.org/10.15479/AT:ISTA:9056\">https://doi.org/10.15479/AT:ISTA:9056</a>.","short":"G.F. Osang, Multi-Cover Persistence and Delaunay Mosaics, Institute of Science and Technology Austria, 2021."},"month":"02","day":"01","type":"dissertation","file_date_updated":"2021-02-03T10:37:28Z","language":[{"iso":"eng"}],"corr_author":"1","date_published":"2021-02-01T00:00:00Z","file":[{"content_type":"application/zip","creator":"patrickd","file_name":"thesis_source.zip","date_updated":"2021-02-03T10:37:28Z","date_created":"2021-02-02T14:09:25Z","file_id":"9063","relation":"source_file","file_size":13446994,"checksum":"bcf27986147cab0533b6abadd74e7629","access_level":"closed"},{"date_updated":"2021-02-02T14:09:18Z","date_created":"2021-02-02T14:09:18Z","content_type":"application/pdf","file_name":"thesis_pdfA2b.pdf","creator":"patrickd","checksum":"9cc8af266579a464385bbe2aff6af606","access_level":"open_access","relation":"main_file","file_id":"9064","file_size":5210329,"success":1}],"related_material":{"record":[{"relation":"part_of_dissertation","status":"public","id":"187"},{"relation":"part_of_dissertation","status":"public","id":"8703"}]},"OA_place":"publisher","supervisor":[{"last_name":"Edelsbrunner","first_name":"Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","full_name":"Edelsbrunner, Herbert","orcid":"0000-0002-9823-6833"}],"author":[{"full_name":"Osang, Georg F","orcid":"0000-0002-8882-5116","first_name":"Georg F","last_name":"Osang","id":"464B40D6-F248-11E8-B48F-1D18A9856A87"}],"title":"Multi-cover persistence and Delaunay mosaics","has_accepted_license":"1","degree_awarded":"PhD","date_created":"2021-02-02T14:11:06Z","oa":1,"page":"134","ddc":["006","514","516"],"_id":"9056","place":"Klosterneuburg","alternative_title":["ISTA Thesis"],"publisher":"Institute of Science and Technology Austria"},{"isi":1,"publisher":"Society for Neuroscience","project":[{"_id":"260018B0-B435-11E9-9278-68D0E5697425","grant_number":"725780","call_identifier":"H2020","name":"Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development"},{"name":"Stem Cell Modulation in Neural Development and Regeneration/ P05-Molecular Mechanisms of Neural Stem Cell Lineage Progression","_id":"059F6AB4-7A3F-11EA-A408-12923DDC885E","grant_number":"F7805"}],"article_type":"original","has_accepted_license":"1","date_created":"2021-02-03T12:23:51Z","oa":1,"intvolume":"        41","scopus_import":"1","publication":"The Journal of Neuroscience","_id":"9073","page":"813-822","ddc":["570"],"volume":41,"pmid":1,"quality_controlled":"1","title":"The logic of developing neocortical circuits in health and disease","author":[{"first_name":"Ileana L.","last_name":"Hanganu-Opatz","full_name":"Hanganu-Opatz, Ileana L."},{"first_name":"Simon J. B.","last_name":"Butt","full_name":"Butt, Simon J. B."},{"id":"37B36620-F248-11E8-B48F-1D18A9856A87","first_name":"Simon","last_name":"Hippenmeyer","orcid":"0000-0003-2279-1061","full_name":"Hippenmeyer, Simon"},{"first_name":"Natalia V.","last_name":"De Marco García","full_name":"De Marco García, Natalia V."},{"last_name":"Cardin","first_name":"Jessica A.","full_name":"Cardin, Jessica A."},{"full_name":"Voytek, Bradley","first_name":"Bradley","last_name":"Voytek"},{"full_name":"Muotri, Alysson R.","last_name":"Muotri","first_name":"Alysson R."}],"language":[{"iso":"eng"}],"file":[{"success":1,"file_size":1031150,"relation":"main_file","file_id":"11414","checksum":"578fd7ed1a0aef74bce61bea2d987b33","access_level":"open_access","file_name":"2021_JourNeuroscience_Hanganu.pdf","creator":"dernst","content_type":"application/pdf","date_created":"2022-05-27T06:59:55Z","date_updated":"2022-05-27T06:59:55Z"}],"date_published":"2021-02-03T00:00:00Z","citation":{"ista":"Hanganu-Opatz IL, Butt SJB, Hippenmeyer S, De Marco García NV, Cardin JA, Voytek B, Muotri AR. 2021. The logic of developing neocortical circuits in health and disease. The Journal of Neuroscience. 41(5), 813–822.","ama":"Hanganu-Opatz IL, Butt SJB, Hippenmeyer S, et al. The logic of developing neocortical circuits in health and disease. <i>The Journal of Neuroscience</i>. 2021;41(5):813-822. doi:<a href=\"https://doi.org/10.1523/jneurosci.1655-20.2020\">10.1523/jneurosci.1655-20.2020</a>","apa":"Hanganu-Opatz, I. L., Butt, S. J. B., Hippenmeyer, S., De Marco García, N. V., Cardin, J. A., Voytek, B., &#38; Muotri, A. R. (2021). The logic of developing neocortical circuits in health and disease. <i>The Journal of Neuroscience</i>. Society for Neuroscience. <a href=\"https://doi.org/10.1523/jneurosci.1655-20.2020\">https://doi.org/10.1523/jneurosci.1655-20.2020</a>","ieee":"I. L. Hanganu-Opatz <i>et al.</i>, “The logic of developing neocortical circuits in health and disease,” <i>The Journal of Neuroscience</i>, vol. 41, no. 5. Society for Neuroscience, pp. 813–822, 2021.","mla":"Hanganu-Opatz, Ileana L., et al. “The Logic of Developing Neocortical Circuits in Health and Disease.” <i>The Journal of Neuroscience</i>, vol. 41, no. 5, Society for Neuroscience, 2021, pp. 813–22, doi:<a href=\"https://doi.org/10.1523/jneurosci.1655-20.2020\">10.1523/jneurosci.1655-20.2020</a>.","chicago":"Hanganu-Opatz, Ileana L., Simon J. B. Butt, Simon Hippenmeyer, Natalia V. De Marco García, Jessica A. Cardin, Bradley Voytek, and Alysson R. Muotri. “The Logic of Developing Neocortical Circuits in Health and Disease.” <i>The Journal of Neuroscience</i>. Society for Neuroscience, 2021. <a href=\"https://doi.org/10.1523/jneurosci.1655-20.2020\">https://doi.org/10.1523/jneurosci.1655-20.2020</a>.","short":"I.L. Hanganu-Opatz, S.J.B. Butt, S. Hippenmeyer, N.V. De Marco García, J.A. Cardin, B. Voytek, A.R. Muotri, The Journal of Neuroscience 41 (2021) 813–822."},"month":"02","ec_funded":1,"file_date_updated":"2022-05-27T06:59:55Z","type":"journal_article","keyword":["General Neuroscience"],"day":"03","abstract":[{"text":"The sensory and cognitive abilities of the mammalian neocortex are underpinned by intricate columnar and laminar circuits formed from an array of diverse neuronal populations. One approach to determining how interactions between these circuit components give rise to complex behavior is to investigate the rules by which cortical circuits are formed and acquire functionality during development. This review summarizes recent research on the development of the neocortex, from genetic determination in neural stem cells through to the dynamic role that specific neuronal populations play in the earliest circuits of neocortex, and how they contribute to emergent function and cognition. While many of these endeavors take advantage of model systems, consideration will also be given to advances in our understanding of activity in nascent human circuits. Such cross-species perspective is imperative when investigating the mechanisms underlying the dysfunction of early neocortical circuits in neurodevelopmental disorders, so that one can identify targets amenable to therapeutic intervention.","lang":"eng"}],"issue":"5","publication_identifier":{"eissn":["1529-2401"],"issn":["0270-6474"]},"doi":"10.1523/jneurosci.1655-20.2020","year":"2021","acknowledgement":"Work in the I.L.H.-O. laboratory was supported by European Research Council Grant ERC-2015-CoG 681577 and German Research Foundation Ha 4466/10-1, Ha4466/11-1, Ha4466/12-1, SPP 1665, and SFB 936B5. Work in the S.J.B.B. laboratory was supported by Biotechnology and Biological Sciences Research Council BB/P003796/1, Medical Research Council MR/K004387/1 and MR/T033320/1, Wellcome Trust 215199/Z/19/Z and 102386/Z/13/Z, and John Fell Fund. Work in the S.H. laboratory was supported by European Research Council Grants ERC-2016-CoG 725780 LinPro and FWF SFB F78. This work was supported by National Institutes of Health Grant NIMH 1R01MH110553 to N.V.D.M.G. Work in the J.A.C. laboratory was supported by the Ludwig Family Foundation, Simons Foundation SFARI Research Award, and National Institutes of Health/National Institute of Mental Health R01 MH102365 and R01MH113852. The B.V. laboratory was supported by Whitehall Foundation 2017-12-73, National Science Foundation 1736028, National Institutes of Health, National Institute of General Medical Sciences R01GM134363-01, and Halıcıoğlu Data Science Institute Fellowship. This work was supported by the University of California San Diego School of Medicine.","status":"public","department":[{"_id":"SiHi"}],"publication_status":"published","external_id":{"pmid":["33431633"],"isi":["000616763400002"]},"fulldoi":"https://doi.org/10.1523/jneurosci.1655-20.2020","date_updated":"2025-04-15T08:23:06Z","oa_version":"Published Version","article_processing_charge":"No","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1"},{"author":[{"full_name":"Marchukov, Oleksandr","first_name":"Oleksandr","last_name":"Marchukov"},{"id":"37D278BC-F248-11E8-B48F-1D18A9856A87","last_name":"Volosniev","first_name":"Artem","orcid":"0000-0003-0393-5525","full_name":"Volosniev, Artem"}],"title":"Shape of a sound wave in a weakly-perturbed Bose gas","quality_controlled":"1","volume":10,"date_published":"2021-02-03T00:00:00Z","file":[{"file_name":"2021_SciPostPhysics_Marchukov.pdf","creator":"dernst","content_type":"application/pdf","date_updated":"2021-02-09T07:06:22Z","date_created":"2021-02-09T07:06:22Z","file_size":666512,"success":1,"relation":"main_file","file_id":"9105","access_level":"open_access","checksum":"9fd614b7ab49999e7267874df2582f7e"}],"language":[{"iso":"eng"}],"arxiv":1,"publisher":"SciPost Foundation","isi":1,"publication":"SciPost Physics","scopus_import":"1","intvolume":"        10","ddc":["530"],"_id":"9093","has_accepted_license":"1","article_type":"original","project":[{"grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships","call_identifier":"H2020"}],"date_created":"2021-02-04T12:39:24Z","oa":1,"external_id":{"arxiv":["2004.08075"],"isi":["000646783100027"]},"fulldoi":"https://doi.org/10.21468/scipostphys.10.2.025","department":[{"_id":"MiLe"}],"publication_status":"published","oa_version":"Published Version","article_processing_charge":"No","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","date_updated":"2025-04-14T07:43:51Z","article_number":"025","ec_funded":1,"day":"03","type":"journal_article","file_date_updated":"2021-02-09T07:06:22Z","citation":{"short":"O. Marchukov, A. Volosniev, SciPost Physics 10 (2021).","mla":"Marchukov, Oleksandr, and Artem Volosniev. “Shape of a Sound Wave in a Weakly-Perturbed Bose Gas.” <i>SciPost Physics</i>, vol. 10, no. 2, 025, SciPost Foundation, 2021, doi:<a href=\"https://doi.org/10.21468/scipostphys.10.2.025\">10.21468/scipostphys.10.2.025</a>.","chicago":"Marchukov, Oleksandr, and Artem Volosniev. “Shape of a Sound Wave in a Weakly-Perturbed Bose Gas.” <i>SciPost Physics</i>. SciPost Foundation, 2021. <a href=\"https://doi.org/10.21468/scipostphys.10.2.025\">https://doi.org/10.21468/scipostphys.10.2.025</a>.","ista":"Marchukov O, Volosniev A. 2021. Shape of a sound wave in a weakly-perturbed Bose gas. SciPost Physics. 10(2), 025.","apa":"Marchukov, O., &#38; Volosniev, A. (2021). Shape of a sound wave in a weakly-perturbed Bose gas. <i>SciPost Physics</i>. SciPost Foundation. <a href=\"https://doi.org/10.21468/scipostphys.10.2.025\">https://doi.org/10.21468/scipostphys.10.2.025</a>","ama":"Marchukov O, Volosniev A. Shape of a sound wave in a weakly-perturbed Bose gas. <i>SciPost Physics</i>. 2021;10(2). doi:<a href=\"https://doi.org/10.21468/scipostphys.10.2.025\">10.21468/scipostphys.10.2.025</a>","ieee":"O. Marchukov and A. Volosniev, “Shape of a sound wave in a weakly-perturbed Bose gas,” <i>SciPost Physics</i>, vol. 10, no. 2. SciPost Foundation, 2021."},"month":"02","publication_identifier":{"issn":["2542-4653"]},"doi":"10.21468/scipostphys.10.2.025","acknowledgement":"We acknowledge fruitful discussions with Dr. Simos Mistakidis regarding beyond mean-field\r\neffects in our system. We also thank Prof. Maxim Olshanii for valuable suggestions to improve\r\nthe manuscript.O.V.M acknowledges the support from the National Science Foundation\r\nthrough grants No. PHY-1402249, No. PHY-1607221, and No. PHY-1912542 and the\r\nBinational (US-Israel) Science Foundation through grant No. 2015616, as well as by the Israel\r\nScience Foundation (grant No. 1287/17) and from the German Aeronautics and Space Administration\r\n(DLR) through Grant No. 50WM1957. This work has also received funding from\r\nthe DFG Project No.413495248 [VO 2437/1-1] and European Union’s Horizon 2020 research\r\nand innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 754411\r\n(A. G. V.)","status":"public","year":"2021","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)"},"issue":"2","abstract":[{"lang":"eng","text":"We employ the Gross-Pitaevskii equation to study acoustic emission generated in a uniform Bose gas by a static impurity. The impurity excites a sound-wave packet, which propagates through the gas. We calculate the shape of this wave packet in the limit of long wave lengths, and argue that it is possible to extract properties of the impurity by observing this shape. We illustrate here this possibility for a Bose gas with a trapped impurity atom -- an example of a relevant experimental setup. Presented results are general for all one-dimensional systems described by the nonlinear Schrödinger equation and can also be used in nonatomic systems, e.g., to analyze light propagation in nonlinear optical media. Finally, we calculate the shape of the sound-wave packet for a three-dimensional Bose gas assuming a spherically symmetric perturbation."}]},{"file_date_updated":"2022-05-12T14:16:21Z","type":"journal_article","day":"05","license":"https://creativecommons.org/licenses/by-nc-sa/4.0/","month":"04","citation":{"short":"A.F. Leithner, L. Altenburger, R. Hauschild, F.P. Assen, K. Rottner, S. TEB, A. Diz-Muñoz, J. Stein, M.K. Sixt, Journal of Cell Biology 220 (2021).","mla":"Leithner, Alexander F., et al. “Dendritic Cell Actin Dynamics Control Contact Duration and Priming Efficiency at the Immunological Synapse.” <i>Journal of Cell Biology</i>, vol. 220, no. 4, e202006081, Rockefeller University Press, 2021, doi:<a href=\"https://doi.org/10.1083/jcb.202006081\">10.1083/jcb.202006081</a>.","chicago":"Leithner, Alexander F, LM Altenburger, R Hauschild, Frank P Assen, K Rottner, Stradal TEB, A Diz-Muñoz, JV Stein, and Michael K Sixt. “Dendritic Cell Actin Dynamics Control Contact Duration and Priming Efficiency at the Immunological Synapse.” <i>Journal of Cell Biology</i>. Rockefeller University Press, 2021. <a href=\"https://doi.org/10.1083/jcb.202006081\">https://doi.org/10.1083/jcb.202006081</a>.","ieee":"A. F. Leithner <i>et al.</i>, “Dendritic cell actin dynamics control contact duration and priming efficiency at the immunological synapse,” <i>Journal of Cell Biology</i>, vol. 220, no. 4. Rockefeller University Press, 2021.","apa":"Leithner, A. F., Altenburger, L., Hauschild, R., Assen, F. P., Rottner, K., TEB, S., … Sixt, M. K. (2021). Dendritic cell actin dynamics control contact duration and priming efficiency at the immunological synapse. <i>Journal of Cell Biology</i>. Rockefeller University Press. <a href=\"https://doi.org/10.1083/jcb.202006081\">https://doi.org/10.1083/jcb.202006081</a>","ama":"Leithner AF, Altenburger L, Hauschild R, et al. Dendritic cell actin dynamics control contact duration and priming efficiency at the immunological synapse. <i>Journal of Cell Biology</i>. 2021;220(4). doi:<a href=\"https://doi.org/10.1083/jcb.202006081\">10.1083/jcb.202006081</a>","ista":"Leithner AF, Altenburger L, Hauschild R, Assen FP, Rottner K, TEB S, Diz-Muñoz A, Stein J, Sixt MK. 2021. Dendritic cell actin dynamics control contact duration and priming efficiency at the immunological synapse. Journal of Cell Biology. 220(4), e202006081."},"year":"2021","status":"public","doi":"10.1083/jcb.202006081","publication_identifier":{"issn":["0021-9525"],"eissn":["1540-8140"]},"abstract":[{"lang":"eng","text":"Dendritic cells (DCs) are crucial for the priming of naive T cells and the initiation of adaptive immunity. Priming is initiated at a heterologous cell–cell contact, the immunological synapse (IS). While it is established that F-actin dynamics regulates signaling at the T cell side of the contact, little is known about the cytoskeletal contribution on the DC side. Here, we show that the DC actin cytoskeleton is decisive for the formation of a multifocal synaptic structure, which correlates with T cell priming efficiency. DC actin at the IS appears in transient foci that are dynamized by the WAVE regulatory complex (WRC). The absence of the WRC in DCs leads to stabilized contacts with T cells, caused by an increase in ICAM1-integrin–mediated cell–cell adhesion. This results in lower numbers of activated and proliferating T cells, demonstrating an important role for DC actin in the regulation of immune synapse functionality."}],"issue":"4","tmp":{"short":"CC BY-NC-SA (4.0)","legal_code_url":"https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode","image":"/images/cc_by_nc_sa.png","name":"Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0)"},"fulldoi":"https://doi.org/10.1083/jcb.202006081","external_id":{"pmid":["33533935"],"isi":["000626365700001"]},"publication_status":"published","department":[{"_id":"MiSi"}],"user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","article_processing_charge":"No","oa_version":"Published Version","article_number":"e202006081","date_updated":"2024-10-09T21:00:23Z","isi":1,"publisher":"Rockefeller University Press","_id":"9094","ddc":["570"],"scopus_import":"1","intvolume":"       220","publication":"Journal of Cell Biology","date_created":"2021-02-05T10:08:04Z","oa":1,"article_type":"original","has_accepted_license":"1","title":"Dendritic cell actin dynamics control contact duration and priming efficiency at the immunological synapse","author":[{"orcid":"0000-0002-1073-744X","full_name":"Leithner, Alexander F","id":"3B1B77E4-F248-11E8-B48F-1D18A9856A87","last_name":"Leithner","first_name":"Alexander F"},{"full_name":"Altenburger, LM","last_name":"Altenburger","first_name":"LM"},{"full_name":"Hauschild, R","first_name":"R","last_name":"Hauschild"},{"orcid":"0000-0003-3470-6119","full_name":"Assen, Frank P","id":"3A8E7F24-F248-11E8-B48F-1D18A9856A87","first_name":"Frank P","last_name":"Assen"},{"last_name":"Rottner","first_name":"K","full_name":"Rottner, K"},{"full_name":"TEB, Stradal","last_name":"TEB","first_name":"Stradal"},{"last_name":"Diz-Muñoz","first_name":"A","full_name":"Diz-Muñoz, A"},{"full_name":"Stein, JV","last_name":"Stein","first_name":"JV"},{"last_name":"Sixt","first_name":"Michael K","id":"41E9FBEA-F248-11E8-B48F-1D18A9856A87","full_name":"Sixt, Michael K","orcid":"0000-0002-6620-9179"}],"volume":220,"pmid":1,"quality_controlled":"1","file":[{"creator":"dernst","file_name":"2021_JournCellBiology_Leithner.pdf","content_type":"application/pdf","date_updated":"2022-05-12T14:16:21Z","date_created":"2022-05-12T14:16:21Z","success":1,"file_size":5102328,"relation":"main_file","file_id":"11367","checksum":"843ebc153847c8626e13c9c5ce71d533","access_level":"open_access"}],"date_published":"2021-04-05T00:00:00Z","corr_author":"1","language":[{"iso":"eng"}]},{"language":[{"iso":"eng"}],"arxiv":1,"date_published":"2021-05-01T00:00:00Z","quality_controlled":"1","volume":344,"author":[{"full_name":"Ivanov, Grigory","first_name":"Grigory","last_name":"Ivanov","id":"87744F66-5C6F-11EA-AFE0-D16B3DDC885E"}],"title":"On the volume of projections of the cross-polytope","oa":1,"date_created":"2021-02-07T23:01:12Z","article_type":"original","_id":"9098","publication":"Discrete Mathematics","scopus_import":"1","intvolume":"       344","isi":1,"publisher":"Elsevier","date_updated":"2025-07-10T12:01:36Z","article_number":"112312","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Preprint","article_processing_charge":"No","publication_status":"published","department":[{"_id":"UlWa"}],"fulldoi":"https://doi.org/10.1016/j.disc.2021.112312","external_id":{"arxiv":["1808.09165"],"isi":["000633365200001"]},"issue":"5","abstract":[{"lang":"eng","text":"We study properties of the volume of projections of the n-dimensional\r\ncross-polytope $\\crosp^n = \\{ x \\in \\R^n \\mid |x_1| + \\dots + |x_n| \\leqslant 1\\}.$ We prove that the projection of $\\crosp^n$ onto a k-dimensional coordinate subspace has the maximum possible volume for k=2 and for k=3.\r\nWe obtain the exact lower bound on the volume of such a projection onto a two-dimensional plane. Also, we show that there exist local maxima which are not global ones for the volume of a projection of $\\crosp^n$ onto a k-dimensional subspace for any n>k⩾2."}],"acknowledgement":"Research was supported by the Russian Foundation for Basic Research, project 18-01-00036A (Theorems 1.5 and 5.3) and by the Ministry of Education and Science of the Russian Federation in the framework of MegaGrant no 075-15-2019-1926 (Theorems 1.2 and 7.3).","status":"public","year":"2021","doi":"10.1016/j.disc.2021.112312","publication_identifier":{"issn":["0012-365X"]},"month":"05","citation":{"mla":"Ivanov, Grigory. “On the Volume of Projections of the Cross-Polytope.” <i>Discrete Mathematics</i>, vol. 344, no. 5, 112312, Elsevier, 2021, doi:<a href=\"https://doi.org/10.1016/j.disc.2021.112312\">10.1016/j.disc.2021.112312</a>.","chicago":"Ivanov, Grigory. “On the Volume of Projections of the Cross-Polytope.” <i>Discrete Mathematics</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.disc.2021.112312\">https://doi.org/10.1016/j.disc.2021.112312</a>.","short":"G. Ivanov, Discrete Mathematics 344 (2021).","ista":"Ivanov G. 2021. On the volume of projections of the cross-polytope. Discrete Mathematics. 344(5), 112312.","apa":"Ivanov, G. (2021). On the volume of projections of the cross-polytope. <i>Discrete Mathematics</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.disc.2021.112312\">https://doi.org/10.1016/j.disc.2021.112312</a>","ama":"Ivanov G. On the volume of projections of the cross-polytope. <i>Discrete Mathematics</i>. 2021;344(5). doi:<a href=\"https://doi.org/10.1016/j.disc.2021.112312\">10.1016/j.disc.2021.112312</a>","ieee":"G. Ivanov, “On the volume of projections of the cross-polytope,” <i>Discrete Mathematics</i>, vol. 344, no. 5. Elsevier, 2021."},"type":"journal_article","day":"01","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1808.09165"}]},{"publication_identifier":{"eissn":["1420-8938"],"issn":["0003-889X"]},"doi":"10.1007/s00013-020-01564-y","year":"2021","status":"public","acknowledgement":"I would like to thank Piotr Achinger, Daniel Huybrechts, Katrina Honigs, Marcin Lara, and Maciek Zdanowicz for the mathematical discussions, Tamas Hausel for hosting me in his research group at IST Austria, and the referees for their valuable suggestions. This research has received funding from the European Union’s Horizon 2020 research and innovation programme under Marie Sklodowska-Curie Grant Agreement No. 754411.","abstract":[{"text":"We show that on an Abelian variety over an algebraically closed field of positive characteristic, the obstruction to lifting an automorphism to a field of characteristic zero as a morphism vanishes if and only if it vanishes for lifting it as a derived autoequivalence. We also compare the deformation space of these two types of deformations.","lang":"eng"}],"issue":"5","ec_funded":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/2001.07762"}],"day":"01","type":"journal_article","citation":{"ista":"Srivastava TK. 2021. Lifting automorphisms on Abelian varieties as derived autoequivalences. Archiv der Mathematik. 116(5), 515–527.","ieee":"T. K. Srivastava, “Lifting automorphisms on Abelian varieties as derived autoequivalences,” <i>Archiv der Mathematik</i>, vol. 116, no. 5. Springer Nature, pp. 515–527, 2021.","ama":"Srivastava TK. Lifting automorphisms on Abelian varieties as derived autoequivalences. <i>Archiv der Mathematik</i>. 2021;116(5):515-527. doi:<a href=\"https://doi.org/10.1007/s00013-020-01564-y\">10.1007/s00013-020-01564-y</a>","apa":"Srivastava, T. K. (2021). Lifting automorphisms on Abelian varieties as derived autoequivalences. <i>Archiv Der Mathematik</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s00013-020-01564-y\">https://doi.org/10.1007/s00013-020-01564-y</a>","short":"T.K. Srivastava, Archiv Der Mathematik 116 (2021) 515–527.","chicago":"Srivastava, Tanya K. “Lifting Automorphisms on Abelian Varieties as Derived Autoequivalences.” <i>Archiv Der Mathematik</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s00013-020-01564-y\">https://doi.org/10.1007/s00013-020-01564-y</a>.","mla":"Srivastava, Tanya K. “Lifting Automorphisms on Abelian Varieties as Derived Autoequivalences.” <i>Archiv Der Mathematik</i>, vol. 116, no. 5, Springer Nature, 2021, pp. 515–27, doi:<a href=\"https://doi.org/10.1007/s00013-020-01564-y\">10.1007/s00013-020-01564-y</a>."},"month":"05","article_processing_charge":"No","oa_version":"Preprint","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2025-07-10T12:01:36Z","external_id":{"isi":["000612580200001"],"arxiv":["2001.07762"]},"fulldoi":"https://doi.org/10.1007/s00013-020-01564-y","department":[{"_id":"TaHa"}],"publication_status":"published","intvolume":"       116","scopus_import":"1","publication":"Archiv der Mathematik","_id":"9099","page":"515-527","project":[{"grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships","call_identifier":"H2020"}],"article_type":"original","oa":1,"date_created":"2021-02-07T23:01:13Z","isi":1,"publisher":"Springer Nature","date_published":"2021-05-01T00:00:00Z","arxiv":1,"language":[{"iso":"eng"}],"title":"Lifting automorphisms on Abelian varieties as derived autoequivalences","author":[{"last_name":"Srivastava","first_name":"Tanya K","id":"4D046628-F248-11E8-B48F-1D18A9856A87","full_name":"Srivastava, Tanya K"}],"volume":116,"quality_controlled":"1"},{"file_date_updated":"2021-02-09T09:04:02Z","day":"18","type":"journal_article","month":"01","citation":{"chicago":"Faria, Rui, Kerstin Johannesson, and Sean Stankowski. “Speciation in Marine Environments: Diving under the Surface.” <i>Journal of Evolutionary Biology</i>. Wiley, 2021. <a href=\"https://doi.org/10.1111/jeb.13756\">https://doi.org/10.1111/jeb.13756</a>.","mla":"Faria, Rui, et al. “Speciation in Marine Environments: Diving under the Surface.” <i>Journal of Evolutionary Biology</i>, vol. 34, no. 1, Wiley, 2021, pp. 4–15, doi:<a href=\"https://doi.org/10.1111/jeb.13756\">10.1111/jeb.13756</a>.","short":"R. Faria, K. Johannesson, S. Stankowski, Journal of Evolutionary Biology 34 (2021) 4–15.","ista":"Faria R, Johannesson K, Stankowski S. 2021. Speciation in marine environments: Diving under the surface. Journal of Evolutionary Biology. 34(1), 4–15.","apa":"Faria, R., Johannesson, K., &#38; Stankowski, S. (2021). Speciation in marine environments: Diving under the surface. <i>Journal of Evolutionary Biology</i>. Wiley. <a href=\"https://doi.org/10.1111/jeb.13756\">https://doi.org/10.1111/jeb.13756</a>","ama":"Faria R, Johannesson K, Stankowski S. Speciation in marine environments: Diving under the surface. <i>Journal of Evolutionary Biology</i>. 2021;34(1):4-15. doi:<a href=\"https://doi.org/10.1111/jeb.13756\">10.1111/jeb.13756</a>","ieee":"R. Faria, K. Johannesson, and S. Stankowski, “Speciation in marine environments: Diving under the surface,” <i>Journal of Evolutionary Biology</i>, vol. 34, no. 1. Wiley, pp. 4–15, 2021."},"year":"2021","status":"public","acknowledgement":"We would like to thank all the participants in the speciation symposium of the Marine Evolution Conference in Sweden for the interesting discussions and to all the contributors to this special\r\nissue. We thank Nicolas Bierne and Wolf Blanckenhorn (reviewer and editor, respectively) for valuable suggestions during the revision of the manuscript, and Roger K. Butlin and Anja M. Westram for very helpful comments on a previous draft. We would also like to thank Wolf Blanckenhorn and Nicola Cook, the Editor in Chief and the Managing Editor of the Journal of Evolutionary Biology, respectively, for the encouragement and support in putting together this special issue, and to all reviewers involved. RF was financed by the European Union's Horizon 2020 Research and Innovation Programme under the Marie Sklodowska-Curie Grant Agreement Number 706376 and is currently financed by the FEDER Funds through the Operational Competitiveness Factors Program COMPETE and by National Funds through the Foundation for Science and Technology (FCT) within the scope of the project ‘Hybrabbid' (PTDC/BIA-EVL/30628/2017-POCI-01-0145-FEDER-030628). KJ was funded by the Swedish\r\nResearch Council, VR. SS was supported by NERC and ERC funding awarded to Roger K. Butlin.","doi":"10.1111/jeb.13756","publication_identifier":{"eissn":["1420-9101"],"issn":["1010-061X"]},"abstract":[{"lang":"eng","text":"Marine environments are inhabited by a broad representation of the tree of life, yet our understanding of speciation in marine ecosystems is extremely limited compared with terrestrial and freshwater environments. Developing a more comprehensive picture of speciation in marine environments requires that we 'dive under the surface' by studying a wider range of taxa and ecosystems is necessary for a more comprehensive picture of speciation. Although studying marine evolutionary processes is often challenging, recent technological advances in different fields, from maritime engineering to genomics, are making it increasingly possible to study speciation of marine life forms across diverse ecosystems and taxa. Motivated by recent research in the field, including the 14 contributions in this issue, we highlight and discuss six axes of research that we think will deepen our understanding of speciation in the marine realm: (a) study a broader range of marine environments and organisms; (b) identify the reproductive barriers driving speciation between marine taxa; (c) understand the role of different genomic architectures underlying reproductive isolation; (d) infer the evolutionary history of divergence using model‐based approaches; (e) study patterns of hybridization and introgression between marine taxa; and (f) implement highly interdisciplinary, collaborative research programmes. In outlining these goals, we hope to inspire researchers to continue filling this critical knowledge gap surrounding the origins of marine biodiversity."}],"issue":"1","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)"},"fulldoi":"https://doi.org/10.1111/jeb.13756","external_id":{"isi":["000608367500001"]},"publication_status":"published","department":[{"_id":"NiBa"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","oa_version":"Published Version","date_updated":"2025-07-10T12:01:37Z","isi":1,"publisher":"Wiley","_id":"9100","page":"4-15","ddc":["570"],"scopus_import":"1","intvolume":"        34","publication":"Journal of Evolutionary Biology","oa":1,"date_created":"2021-02-07T23:01:13Z","article_type":"original","has_accepted_license":"1","title":"Speciation in marine environments: Diving under the surface","author":[{"first_name":"Rui","last_name":"Faria","full_name":"Faria, Rui"},{"first_name":"Kerstin","last_name":"Johannesson","full_name":"Johannesson, Kerstin"},{"full_name":"Stankowski, Sean","id":"43161670-5719-11EA-8025-FABC3DDC885E","first_name":"Sean","last_name":"Stankowski"}],"volume":34,"quality_controlled":"1","file":[{"access_level":"open_access","checksum":"5755856a5368d4b4cdd6fad5ab27f4d1","file_id":"9108","relation":"main_file","success":1,"file_size":561340,"date_created":"2021-02-09T09:04:02Z","date_updated":"2021-02-09T09:04:02Z","content_type":"application/pdf","file_name":"2021_JourEvolBiology_Faria.pdf","creator":"dernst"}],"date_published":"2021-01-18T00:00:00Z","language":[{"iso":"eng"}]},{"month":"07","citation":{"apa":"Reber, S. A., Oh, J., Janisch, J., Stevenson, C., Foggett, S., &#38; Wilkinson, A. (2021). Early life differences in behavioral predispositions in two Alligatoridae species. <i>Animal Cognition</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s10071-020-01461-5\">https://doi.org/10.1007/s10071-020-01461-5</a>","ista":"Reber SA, Oh J, Janisch J, Stevenson C, Foggett S, Wilkinson A. 2021. Early life differences in behavioral predispositions in two Alligatoridae species. Animal Cognition. 24(4), 753–764.","ieee":"S. A. Reber, J. Oh, J. Janisch, C. Stevenson, S. Foggett, and A. Wilkinson, “Early life differences in behavioral predispositions in two Alligatoridae species,” <i>Animal Cognition</i>, vol. 24, no. 4. Springer Nature, pp. 753–764, 2021.","ama":"Reber SA, Oh J, Janisch J, Stevenson C, Foggett S, Wilkinson A. Early life differences in behavioral predispositions in two Alligatoridae species. <i>Animal Cognition</i>. 2021;24(4):753-764. doi:<a href=\"https://doi.org/10.1007/s10071-020-01461-5\">10.1007/s10071-020-01461-5</a>","short":"S.A. Reber, J. Oh, J. Janisch, C. Stevenson, S. Foggett, A. Wilkinson, Animal Cognition 24 (2021) 753–764.","mla":"Reber, Stephan A., et al. “Early Life Differences in Behavioral Predispositions in Two Alligatoridae Species.” <i>Animal Cognition</i>, vol. 24, no. 4, Springer Nature, 2021, pp. 753–64, doi:<a href=\"https://doi.org/10.1007/s10071-020-01461-5\">10.1007/s10071-020-01461-5</a>.","chicago":"Reber, Stephan A., Jinook Oh, Judith Janisch, Colin Stevenson, Shaun Foggett, and Anna Wilkinson. “Early Life Differences in Behavioral Predispositions in Two Alligatoridae Species.” <i>Animal Cognition</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s10071-020-01461-5\">https://doi.org/10.1007/s10071-020-01461-5</a>."},"day":"01","type":"journal_article","file_date_updated":"2021-02-09T07:40:14Z","issue":"4","abstract":[{"lang":"eng","text":"Behavioral predispositions are innate tendencies of animals to behave in a given way without the input of learning. They increase survival chances and, due to environmental and ecological challenges, may vary substantially even between closely related taxa. These differences are likely to be especially pronounced in long-lived species like crocodilians. This order is particularly relevant for comparative cognition due to its phylogenetic proximity to birds. Here we compared early life behavioral predispositions in two Alligatoridae species. We exposed American alligator and spectacled caiman hatchlings to three different novel situations: a novel object, a novel environment that was open and a novel environment with a shelter. This was then repeated a week later. During exposure to the novel environments, alligators moved around more and explored a larger range of the arena than the caimans. When exposed to the novel object, the alligators reduced the mean distance to the novel object in the second phase, while the caimans further increased it, indicating diametrically opposite ontogenetic development in behavioral predispositions. Although all crocodilian hatchlings face comparable challenges, e.g., high predation pressure, the effectiveness of parental protection might explain the observed pattern. American alligators are apex predators capable of protecting their offspring against most dangers, whereas adult spectacled caimans are frequently predated themselves. Their distancing behavior might be related to increased predator avoidance and also explain the success of invasive spectacled caimans in the natural habitats of other crocodilians."}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)"},"status":"public","acknowledgement":"We thank Jamie Gilks and Terry Miles for their support at Crocodiles of the World. We are grateful to the Department of Cognitive Biology, University of Vienna for provision of working space and hardware. Finally, we would like to thank Cliodhna Quigley, Rachael Harrison and Urs A. Reber for discussion. Open Access funding provided by Lund University. This project was funded by the Marietta Blau grant (BMFWF) to S. A. R.","year":"2021","publication_identifier":{"eissn":["1435-9456"],"issn":["1435-9448"]},"doi":"10.1007/s10071-020-01461-5","publication_status":"published","department":[{"_id":"SyCr"}],"fulldoi":"https://doi.org/10.1007/s10071-020-01461-5","external_id":{"isi":["000608382100001"],"pmid":["33454828"]},"date_updated":"2025-06-12T06:34:03Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"No","oa_version":"Published Version","isi":1,"publisher":"Springer Nature","oa":1,"date_created":"2021-02-07T23:01:13Z","has_accepted_license":"1","article_type":"original","ddc":["590"],"page":"753-764","_id":"9101","publication":"Animal Cognition","scopus_import":"1","intvolume":"        24","quality_controlled":"1","pmid":1,"volume":24,"author":[{"first_name":"Stephan A.","last_name":"Reber","full_name":"Reber, Stephan A."},{"first_name":"Jinook","last_name":"Oh","id":"403169A4-080F-11EA-9993-BF3F3DDC885E","full_name":"Oh, Jinook","orcid":"0000-0001-7425-2372"},{"last_name":"Janisch","first_name":"Judith","full_name":"Janisch, Judith"},{"full_name":"Stevenson, Colin","first_name":"Colin","last_name":"Stevenson"},{"full_name":"Foggett, Shaun","last_name":"Foggett","first_name":"Shaun"},{"first_name":"Anna","last_name":"Wilkinson","full_name":"Wilkinson, Anna"}],"title":"Early life differences in behavioral predispositions in two Alligatoridae species","language":[{"iso":"eng"}],"date_published":"2021-07-01T00:00:00Z","file":[{"date_created":"2021-02-09T07:40:14Z","date_updated":"2021-02-09T07:40:14Z","file_name":"2021_AnimalCognition_Reber.pdf","creator":"dernst","content_type":"application/pdf","access_level":"open_access","checksum":"d9dfa0d1de6d684692b041d936dd858e","file_size":1117991,"success":1,"relation":"main_file","file_id":"9107"}]},{"month":"03","citation":{"chicago":"Brown, Adam, Omer Bobrowski, Elizabeth Munch, and Bei Wang. “Probabilistic Convergence and Stability of Random Mapper Graphs.” <i>Journal of Applied and Computational Topology</i>. Springer Nature, 2021. <a href=\"https://doi.org/10.1007/s41468-020-00063-x\">https://doi.org/10.1007/s41468-020-00063-x</a>.","mla":"Brown, Adam, et al. “Probabilistic Convergence and Stability of Random Mapper Graphs.” <i>Journal of Applied and Computational Topology</i>, vol. 5, no. 1, Springer Nature, 2021, pp. 99–140, doi:<a href=\"https://doi.org/10.1007/s41468-020-00063-x\">10.1007/s41468-020-00063-x</a>.","short":"A. Brown, O. Bobrowski, E. Munch, B. Wang, Journal of Applied and Computational Topology 5 (2021) 99–140.","ista":"Brown A, Bobrowski O, Munch E, Wang B. 2021. Probabilistic convergence and stability of random mapper graphs. Journal of Applied and Computational Topology. 5(1), 99–140.","apa":"Brown, A., Bobrowski, O., Munch, E., &#38; Wang, B. (2021). Probabilistic convergence and stability of random mapper graphs. <i>Journal of Applied and Computational Topology</i>. Springer Nature. <a href=\"https://doi.org/10.1007/s41468-020-00063-x\">https://doi.org/10.1007/s41468-020-00063-x</a>","ieee":"A. Brown, O. Bobrowski, E. Munch, and B. Wang, “Probabilistic convergence and stability of random mapper graphs,” <i>Journal of Applied and Computational Topology</i>, vol. 5, no. 1. Springer Nature, pp. 99–140, 2021.","ama":"Brown A, Bobrowski O, Munch E, Wang B. Probabilistic convergence and stability of random mapper graphs. <i>Journal of Applied and Computational Topology</i>. 2021;5(1):99-140. doi:<a href=\"https://doi.org/10.1007/s41468-020-00063-x\">10.1007/s41468-020-00063-x</a>"},"type":"journal_article","day":"01","file_date_updated":"2021-02-11T14:43:59Z","ec_funded":1,"issue":"1","abstract":[{"text":"We study the probabilistic convergence between the mapper graph and the Reeb graph of a topological space X equipped with a continuous function f:X→R. We first give a categorification of the mapper graph and the Reeb graph by interpreting them in terms of cosheaves and stratified covers of the real line R. We then introduce a variant of the classic mapper graph of Singh et al. (in: Eurographics symposium on point-based graphics, 2007), referred to as the enhanced mapper graph, and demonstrate that such a construction approximates the Reeb graph of (X,f) when it is applied to points randomly sampled from a probability density function concentrated on (X,f). Our techniques are based on the interleaving distance of constructible cosheaves and topological estimation via kernel density estimates. Following Munch and Wang (In: 32nd international symposium on computational geometry, volume 51 of Leibniz international proceedings in informatics (LIPIcs), Dagstuhl, Germany, pp 53:1–53:16, 2016), we first show that the mapper graph of (X,f), a constructible R-space (with a fixed open cover), approximates the Reeb graph of the same space. We then construct an isomorphism between the mapper of (X,f) to the mapper of a super-level set of a probability density function concentrated on (X,f). Finally, building on the approach of Bobrowski et al. (Bernoulli 23(1):288–328, 2017b), we show that, with high probability, we can recover the mapper of the super-level set given a sufficiently large sample. Our work is the first to consider the mapper construction using the theory of cosheaves in a probabilistic setting. It is part of an ongoing effort to combine sheaf theory, probability, and statistics, to support topological data analysis with random data.","lang":"eng"}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)"},"status":"public","acknowledgement":"AB was supported in part by the European Union’s Horizon 2020 research and innovation\r\nprogramme under the Marie Sklodowska-Curie GrantAgreement No. 754411 and NSF IIS-1513616. OB was supported in part by the Israel Science Foundation, Grant 1965/19. BW was supported in part by NSF IIS-1513616 and DBI-1661375. EM was supported in part by NSF CMMI-1800466, DMS-1800446, and CCF-1907591.We would like to thank the Institute for Mathematics and its Applications for hosting a workshop titled Bridging Statistics and Sheaves in May 2018, where this work was conceived.\r\nOpen Access funding provided by Institute of Science and Technology (IST Austria).","year":"2021","publication_identifier":{"eissn":["2367-1734"],"issn":["2367-1726"]},"doi":"10.1007/s41468-020-00063-x","publication_status":"published","department":[{"_id":"HeEd"}],"fulldoi":"https://doi.org/10.1007/s41468-020-00063-x","external_id":{"arxiv":["1909.03488"]},"date_updated":"2025-04-14T07:43:51Z","user_id":"c635000d-4b10-11ee-a964-aac5a93f6ac1","article_processing_charge":"Yes (via OA deal)","oa_version":"Published Version","publisher":"Springer Nature","oa":1,"date_created":"2021-02-11T14:41:02Z","has_accepted_license":"1","article_type":"original","project":[{"grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships","call_identifier":"H2020"}],"page":"99-140","ddc":["510"],"_id":"9111","publication":"Journal of Applied and Computational Topology","intvolume":"         5","scopus_import":"1","quality_controlled":"1","volume":5,"title":"Probabilistic convergence and stability of random mapper graphs","author":[{"id":"70B7FDF6-608D-11E9-9333-8535E6697425","last_name":"Brown","first_name":"Adam","full_name":"Brown, Adam"},{"full_name":"Bobrowski, Omer","last_name":"Bobrowski","first_name":"Omer"},{"last_name":"Munch","first_name":"Elizabeth","full_name":"Munch, Elizabeth"},{"first_name":"Bei","last_name":"Wang","full_name":"Wang, Bei"}],"language":[{"iso":"eng"}],"arxiv":1,"date_published":"2021-03-01T00:00:00Z","file":[{"success":1,"file_size":2090265,"file_id":"9112","relation":"main_file","checksum":"3f02e9d47c428484733da0f588a3c069","access_level":"open_access","file_name":"2020_JourApplCompTopology_Brown.pdf","creator":"dernst","content_type":"application/pdf","date_updated":"2021-02-11T14:43:59Z","date_created":"2021-02-11T14:43:59Z"}]},{"publication_status":"published","department":[{"_id":"StFr"}],"fulldoi":"https://doi.org/10.1021/acssuschemeng.0c07547","external_id":{"isi":["000625460400010"]},"date_updated":"2024-10-09T21:00:24Z","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","oa_version":"None","article_processing_charge":"No","month":"02","citation":{"short":"Z.M. Manzoor Bhat, R. Thimmappa, N.C. Dargily, A. Raafik, A.R. Kottaichamy, M.C. Devendrachari, M. Itagi, H.  Makri Nimbegondi Kotresh, S.A. Freunberger, M. Ottakam Thotiyl, ACS Sustainable Chemistry and Engineering 9 (2021) 3104–3111.","chicago":"Manzoor Bhat, Zahid Manzoor, Ravikumar Thimmappa, Neethu Christudas  Dargily, Abdul  Raafik, Alagar Raja  Kottaichamy, Mruthyunjayachari Chattanahalli  Devendrachari, Mahesh Itagi, Harish  Makri Nimbegondi Kotresh, Stefan Alexander Freunberger, and Musthafa  Ottakam Thotiyl. “Ambient Condition Alcohol Reforming to Hydrogen with Electricity Output.” <i>ACS Sustainable Chemistry and Engineering</i>. American Chemical Society, 2021. <a href=\"https://doi.org/10.1021/acssuschemeng.0c07547\">https://doi.org/10.1021/acssuschemeng.0c07547</a>.","mla":"Manzoor Bhat, Zahid Manzoor, et al. “Ambient Condition Alcohol Reforming to Hydrogen with Electricity Output.” <i>ACS Sustainable Chemistry and Engineering</i>, vol. 9, no. 8, American Chemical Society, 2021, pp. 3104–11, doi:<a href=\"https://doi.org/10.1021/acssuschemeng.0c07547\">10.1021/acssuschemeng.0c07547</a>.","ista":"Manzoor Bhat ZM, Thimmappa R, Dargily NC, Raafik A, Kottaichamy AR, Devendrachari MC, Itagi M,  Makri Nimbegondi Kotresh H, Freunberger SA, Ottakam Thotiyl M. 2021. Ambient condition alcohol reforming to hydrogen with electricity output. ACS Sustainable Chemistry and Engineering. 9(8), 3104–3111.","ieee":"Z. M. Manzoor Bhat <i>et al.</i>, “Ambient condition alcohol reforming to hydrogen with electricity output,” <i>ACS Sustainable Chemistry and Engineering</i>, vol. 9, no. 8. American Chemical Society, pp. 3104–3111, 2021.","apa":"Manzoor Bhat, Z. M., Thimmappa, R., Dargily, N. C., Raafik, A., Kottaichamy, A. R., Devendrachari, M. C., … Ottakam Thotiyl, M. (2021). Ambient condition alcohol reforming to hydrogen with electricity output. <i>ACS Sustainable Chemistry and Engineering</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acssuschemeng.0c07547\">https://doi.org/10.1021/acssuschemeng.0c07547</a>","ama":"Manzoor Bhat ZM, Thimmappa R, Dargily NC, et al. Ambient condition alcohol reforming to hydrogen with electricity output. <i>ACS Sustainable Chemistry and Engineering</i>. 2021;9(8):3104-3111. doi:<a href=\"https://doi.org/10.1021/acssuschemeng.0c07547\">10.1021/acssuschemeng.0c07547</a>"},"day":"11","type":"journal_article","abstract":[{"text":"“Hydrogen economy” could enable a carbon-neutral sustainable energy chain. However, issues with safety, storage, and transport of molecular hydrogen impede its realization. Alcohols as liquid H2 carriers could be enablers, but state-of-the-art reforming is difficult, requiring high temperatures >200 °C and pressures >25 bar, and the resulting H2 is carbonized beyond tolerance levels for direct use in fuel cells. Here, we demonstrate ambient temperature and pressure alcohol reforming in a fuel cell (ARFC) with a simultaneous electrical power output. The alcohol is oxidized at the alkaline anode, where the resulting CO2 is sequestrated as carbonate. Carbon-free H2 is liberated at the acidic cathode. The neutralization energy between the alkaline anode and the acidic cathode drives the process, particularly the unusually high entropy gain (1.27-fold ΔH). The significantly positive temperature coefficient of the resulting electromotive force allows us to harvest a large fraction of the output energy from the surrounding, achieving a thermodynamic efficiency as high as 2.27. MoS2 as the cathode catalyst allows alcohol reforming even under open-air conditions, a challenge that state-of-the-art alcohol reforming failed to overcome. We further show reforming of a wide range of alcohols. The ARFC offers an unprecedented route toward hydrogen economy as CO2 is simultaneously captured and pure H2 produced at mild conditions.","lang":"eng"}],"issue":"8","year":"2021","acknowledgement":"M.O.T. acknowledges DST/TMD/HFC/2 K18/58, DST-SERB, MHRD fast track, and DST Nanomission forfinancialassistance. Z.M.B. acknowledges CSIR-SRF fellowship fromMHRD, India. S.A.F. acknowledges support from IST Austria.","status":"public","publication_identifier":{"eissn":["2168-0485"]},"doi":"10.1021/acssuschemeng.0c07547","volume":9,"quality_controlled":"1","author":[{"full_name":"Manzoor Bhat, Zahid Manzoor","last_name":"Manzoor Bhat","first_name":"Zahid Manzoor"},{"full_name":"Thimmappa, Ravikumar","first_name":"Ravikumar","last_name":"Thimmappa"},{"full_name":"Dargily, Neethu Christudas ","first_name":"Neethu Christudas ","last_name":"Dargily"},{"full_name":"Raafik, Abdul ","first_name":"Abdul ","last_name":"Raafik"},{"first_name":"Alagar Raja ","last_name":"Kottaichamy","full_name":"Kottaichamy, Alagar Raja "},{"full_name":"Devendrachari, Mruthyunjayachari Chattanahalli ","last_name":"Devendrachari","first_name":"Mruthyunjayachari Chattanahalli "},{"full_name":"Itagi, Mahesh","last_name":"Itagi","first_name":"Mahesh"},{"full_name":" Makri Nimbegondi Kotresh, Harish","last_name":" Makri Nimbegondi Kotresh","first_name":"Harish"},{"orcid":"0000-0003-2902-5319","full_name":"Freunberger, Stefan Alexander","id":"A8CA28E6-CE23-11E9-AD2D-EC27E6697425","first_name":"Stefan Alexander","last_name":"Freunberger"},{"full_name":"Ottakam Thotiyl, Musthafa ","first_name":"Musthafa ","last_name":"Ottakam Thotiyl"}],"title":"Ambient condition alcohol reforming to hydrogen with electricity output","language":[{"iso":"eng"}],"corr_author":"1","date_published":"2021-02-11T00:00:00Z","isi":1,"publisher":"American Chemical Society","date_created":"2021-02-12T09:20:18Z","article_type":"original","_id":"9113","page":"3104-3111","scopus_import":"1","intvolume":"         9","publication":"ACS Sustainable Chemistry and Engineering"},{"date_updated":"2026-04-07T13:26:13Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","article_processing_charge":"Yes (via OA deal)","oa_version":"Published Version","publication_status":"published","department":[{"_id":"MaIb"}],"fulldoi":"https://doi.org/10.1021/acsenergylett.0c02448","external_id":{"isi":["000619803400036"],"pmid":["33614964"]},"abstract":[{"lang":"eng","text":"Cesium lead halides have intrinsically unstable crystal lattices and easily transform within perovskite and nonperovskite structures. In this work, we explore the conversion of the perovskite CsPbBr3 into Cs4PbBr6 in the presence of PbS at 450 °C to produce doped nanocrystal-based composites with embedded Cs4PbBr6 nanoprecipitates. We show that PbBr2 is extracted from CsPbBr3 and diffuses into the PbS lattice with a consequent increase in the concentration of free charge carriers. This new doping strategy enables the adjustment of the density of charge carriers between 1019 and 1020 cm–3, and it may serve as a general strategy for doping other nanocrystal-based semiconductors."}],"issue":"2","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)"},"year":"2021","acknowledgement":"M.C. has received funding from the European Union’s Horizon 2020 research and innovation programme under the Marie Skłodowska-Curie Grant Agreement No. 665385. ICN2\r\nacknowledges funding from Generalitat de Catalunya 2017 SGR 327. ICN2 is supported by the Severo Ochoa program from Spanish MINECO (Grant No. SEV-2017-0706) and is funded by the CERCA Programme/Generalitat de Catalunya. This project has received funding from the European Union’s Horizon 2020 research and innovation programme under grant agreement No 823717 − ESTEEM3. M.V.K. acknowledges the support by the European Research Council under the Horizon 2020 Framework Program (ERC Consolidator Grant SCALEHALO\r\nGrant Agreement No. 819740) and by FET-OPEN project no. 862656 (DROP-IT).","status":"public","publication_identifier":{"eissn":["2380-8195"]},"doi":"10.1021/acsenergylett.0c02448","month":"01","citation":{"short":"M. Calcabrini, A. Genc, Y. Liu, T. Kleinhanns, S. Lee, D.N. Dirin, Q.A. Akkerman, M.V. Kovalenko, J. Arbiol, M. Ibáñez, ACS Energy Letters 6 (2021) 581–587.","mla":"Calcabrini, Mariano, et al. “Exploiting the Lability of Metal Halide Perovskites for Doping Semiconductor Nanocomposites.” <i>ACS Energy Letters</i>, vol. 6, no. 2, American Chemical Society, 2021, pp. 581–87, doi:<a href=\"https://doi.org/10.1021/acsenergylett.0c02448\">10.1021/acsenergylett.0c02448</a>.","chicago":"Calcabrini, Mariano, Aziz Genc, Yu Liu, Tobias Kleinhanns, Seungho Lee, Dmitry N. Dirin, Quinten A. Akkerman, Maksym V. Kovalenko, Jordi Arbiol, and Maria Ibáñez. “Exploiting the Lability of Metal Halide Perovskites for Doping Semiconductor Nanocomposites.” <i>ACS Energy Letters</i>. American Chemical Society, 2021. <a href=\"https://doi.org/10.1021/acsenergylett.0c02448\">https://doi.org/10.1021/acsenergylett.0c02448</a>.","apa":"Calcabrini, M., Genc, A., Liu, Y., Kleinhanns, T., Lee, S., Dirin, D. N., … Ibáñez, M. (2021). Exploiting the lability of metal halide perovskites for doping semiconductor nanocomposites. <i>ACS Energy Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acsenergylett.0c02448\">https://doi.org/10.1021/acsenergylett.0c02448</a>","ieee":"M. Calcabrini <i>et al.</i>, “Exploiting the lability of metal halide perovskites for doping semiconductor nanocomposites,” <i>ACS Energy Letters</i>, vol. 6, no. 2. American Chemical Society, pp. 581–587, 2021.","ista":"Calcabrini M, Genc A, Liu Y, Kleinhanns T, Lee S, Dirin DN, Akkerman QA, Kovalenko MV, Arbiol J, Ibáñez M. 2021. Exploiting the lability of metal halide perovskites for doping semiconductor nanocomposites. ACS Energy Letters. 6(2), 581–587.","ama":"Calcabrini M, Genc A, Liu Y, et al. Exploiting the lability of metal halide perovskites for doping semiconductor nanocomposites. <i>ACS Energy Letters</i>. 2021;6(2):581-587. doi:<a href=\"https://doi.org/10.1021/acsenergylett.0c02448\">10.1021/acsenergylett.0c02448</a>"},"file_date_updated":"2021-02-17T07:36:52Z","day":"20","type":"journal_article","ec_funded":1,"language":[{"iso":"eng"}],"related_material":{"record":[{"id":"12885","status":"public","relation":"dissertation_contains"}]},"file":[{"date_created":"2021-02-17T07:36:52Z","date_updated":"2021-02-17T07:36:52Z","content_type":"application/pdf","creator":"dernst","file_name":"2021_ACSEnergyLetters_Calcabrini.pdf","access_level":"open_access","checksum":"6fa7374bf8b95fdfe6e6c595322a6689","file_id":"9155","relation":"main_file","success":1,"file_size":5071201}],"date_published":"2021-01-20T00:00:00Z","volume":6,"quality_controlled":"1","pmid":1,"title":"Exploiting the lability of metal halide perovskites for doping semiconductor nanocomposites","author":[{"orcid":"0000-0003-4566-5877","full_name":"Calcabrini, Mariano","id":"45D7531A-F248-11E8-B48F-1D18A9856A87","first_name":"Mariano","last_name":"Calcabrini"},{"full_name":"Genc, Aziz","last_name":"Genc","first_name":"Aziz"},{"full_name":"Liu, Yu","orcid":"0000-0001-7313-6740","last_name":"Liu","first_name":"Yu","id":"2A70014E-F248-11E8-B48F-1D18A9856A87"},{"orcid":"0000-0003-1537-7436","full_name":"Kleinhanns, Tobias","id":"8BD9DE16-AB3C-11E9-9C8C-2A03E6697425","last_name":"Kleinhanns","first_name":"Tobias"},{"id":"BB243B88-D767-11E9-B658-BC13E6697425","first_name":"Seungho","last_name":"Lee","orcid":"0000-0002-6962-8598","full_name":"Lee, Seungho"},{"first_name":"Dmitry N.","last_name":"Dirin","full_name":"Dirin, Dmitry N."},{"last_name":"Akkerman","first_name":"Quinten A.","full_name":"Akkerman, Quinten A."},{"first_name":"Maksym V.","last_name":"Kovalenko","full_name":"Kovalenko, Maksym V."},{"full_name":"Arbiol, Jordi","first_name":"Jordi","last_name":"Arbiol"},{"orcid":"0000-0001-5013-2843","full_name":"Ibáñez, Maria","id":"43C61214-F248-11E8-B48F-1D18A9856A87","last_name":"Ibáñez","first_name":"Maria"}],"oa":1,"date_created":"2021-02-14T23:01:14Z","article_type":"original","project":[{"name":"International IST Doctoral Program","call_identifier":"H2020","grant_number":"665385","_id":"2564DBCA-B435-11E9-9278-68D0E5697425"}],"has_accepted_license":"1","_id":"9118","ddc":["540"],"page":"581-587","intvolume":"         6","scopus_import":"1","publication":"ACS Energy Letters","publisher":"American Chemical Society","isi":1},{"oa_version":"Preprint","article_processing_charge":"No","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2025-06-12T06:34:23Z","external_id":{"isi":["000614183100001"],"pmid":["33448666"]},"fulldoi":"https://doi.org/10.1111/1755-0998.13323","department":[{"_id":"NiBa"}],"publication_status":"published","doi":"10.1111/1755-0998.13323","publication_identifier":{"eissn":["1755-0998"],"issn":["1755-098X"]},"status":"public","year":"2021","abstract":[{"text":"We present DILS, a deployable statistical analysis platform for conducting demographic inferences with linked selection from population genomic data using an Approximate Bayesian Computation framework. DILS takes as input single‐population or two‐population data sets (multilocus fasta sequences) and performs three types of analyses in a hierarchical manner, identifying: (a) the best demographic model to study the importance of gene flow and population size change on the genetic patterns of polymorphism and divergence, (b) the best genomic model to determine whether the effective size Ne and migration rate N, m are heterogeneously distributed along the genome (implying linked selection) and (c) loci in genomic regions most associated with barriers to gene flow. Also available via a Web interface, an objective of DILS is to facilitate collaborative research in speciation genomics. Here, we show the performance and limitations of DILS by using simulations and finally apply the method to published data on a divergence continuum composed by 28 pairs of Mytilus mussel populations/species.","lang":"eng"}],"main_file_link":[{"url":"https://www.biorxiv.org/content/10.1101/2020.06.15.151597v2","open_access":"1"}],"day":"15","type":"journal_article","citation":{"mla":"Fraisse, Christelle, et al. “DILS: Demographic Inferences with Linked Selection by Using ABC.” <i>Molecular Ecology Resources</i>, vol. 21, Wiley, 2021, pp. 2629–44, doi:<a href=\"https://doi.org/10.1111/1755-0998.13323\">10.1111/1755-0998.13323</a>.","chicago":"Fraisse, Christelle, Iva Popovic, Clément Mazoyer, Bruno Spataro, Stéphane Delmotte, Jonathan Romiguier, Étienne Loire, et al. “DILS: Demographic Inferences with Linked Selection by Using ABC.” <i>Molecular Ecology Resources</i>. Wiley, 2021. <a href=\"https://doi.org/10.1111/1755-0998.13323\">https://doi.org/10.1111/1755-0998.13323</a>.","short":"C. Fraisse, I. Popovic, C. Mazoyer, B. Spataro, S. Delmotte, J. Romiguier, É. Loire, A. Simon, N. Galtier, L. Duret, N. Bierne, X. Vekemans, C. Roux, Molecular Ecology Resources 21 (2021) 2629–2644.","ista":"Fraisse C, Popovic I, Mazoyer C, Spataro B, Delmotte S, Romiguier J, Loire É, Simon A, Galtier N, Duret L, Bierne N, Vekemans X, Roux C. 2021. DILS: Demographic inferences with linked selection by using ABC. Molecular Ecology Resources. 21, 2629–2644.","ama":"Fraisse C, Popovic I, Mazoyer C, et al. DILS: Demographic inferences with linked selection by using ABC. <i>Molecular Ecology Resources</i>. 2021;21:2629-2644. doi:<a href=\"https://doi.org/10.1111/1755-0998.13323\">10.1111/1755-0998.13323</a>","apa":"Fraisse, C., Popovic, I., Mazoyer, C., Spataro, B., Delmotte, S., Romiguier, J., … Roux, C. (2021). DILS: Demographic inferences with linked selection by using ABC. <i>Molecular Ecology Resources</i>. Wiley. <a href=\"https://doi.org/10.1111/1755-0998.13323\">https://doi.org/10.1111/1755-0998.13323</a>","ieee":"C. Fraisse <i>et al.</i>, “DILS: Demographic inferences with linked selection by using ABC,” <i>Molecular Ecology Resources</i>, vol. 21. Wiley, pp. 2629–2644, 2021."},"month":"01","corr_author":"1","date_published":"2021-01-15T00:00:00Z","language":[{"iso":"eng"}],"title":"DILS: Demographic inferences with linked selection by using ABC","author":[{"full_name":"Fraisse, Christelle","orcid":"0000-0001-8441-5075","first_name":"Christelle","last_name":"Fraisse","id":"32DF5794-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Popovic","first_name":"Iva","full_name":"Popovic, Iva"},{"first_name":"Clément","last_name":"Mazoyer","full_name":"Mazoyer, Clément"},{"first_name":"Bruno","last_name":"Spataro","full_name":"Spataro, Bruno"},{"full_name":"Delmotte, Stéphane","last_name":"Delmotte","first_name":"Stéphane"},{"first_name":"Jonathan","last_name":"Romiguier","full_name":"Romiguier, Jonathan"},{"first_name":"Étienne","last_name":"Loire","full_name":"Loire, Étienne"},{"full_name":"Simon, Alexis","last_name":"Simon","first_name":"Alexis"},{"full_name":"Galtier, Nicolas","first_name":"Nicolas","last_name":"Galtier"},{"first_name":"Laurent","last_name":"Duret","full_name":"Duret, Laurent"},{"full_name":"Bierne, Nicolas","last_name":"Bierne","first_name":"Nicolas"},{"full_name":"Vekemans, Xavier","first_name":"Xavier","last_name":"Vekemans"},{"full_name":"Roux, Camille","last_name":"Roux","first_name":"Camille"}],"pmid":1,"quality_controlled":"1","volume":21,"publication":"Molecular Ecology Resources","intvolume":"        21","scopus_import":"1","page":"2629-2644","_id":"9119","article_type":"original","oa":1,"date_created":"2021-02-14T23:01:14Z","isi":1,"publisher":"Wiley"},{"article_number":"013101","date_updated":"2025-04-14T07:43:51Z","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","oa_version":"Published Version","article_processing_charge":"No","publication_status":"published","department":[{"_id":"MaSe"}],"fulldoi":"https://doi.org/10.1088/1742-5468/abc7c7","external_id":{"isi":["000605080300001"]},"abstract":[{"text":"While several tools have been developed to study the ground state of many-body quantum spin systems, the limitations of existing techniques call for the exploration of new approaches. In this manuscript we develop an alternative analytical and numerical framework for many-body quantum spin ground states, based on the disentanglement formalism. In this approach, observables are exactly expressed as Gaussian-weighted functional integrals over scalar fields. We identify the leading contribution to these integrals, given by the saddle point of a suitable effective action. Analytically, we develop a field-theoretical expansion of the functional integrals, performed by means of appropriate Feynman rules. The expansion can be truncated to a desired order to obtain analytical approximations to observables. Numerically, we show that the disentanglement approach can be used to compute ground state expectation values from classical stochastic processes. While the associated fluctuations grow exponentially with imaginary time and the system size, this growth can be mitigated by means of an importance sampling scheme based on knowledge of the saddle point configuration. We illustrate the advantages and limitations of our methods by considering the quantum Ising model in 1, 2 and 3 spatial dimensions. Our analytical and numerical approaches are applicable to a broad class of systems, bridging concepts from quantum lattice models, continuum field theory, and classical stochastic processes.","lang":"eng"}],"issue":"1","tmp":{"legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","image":"/images/cc_by.png","short":"CC BY (4.0)"},"year":"2021","status":"public","acknowledgement":"S D N would like to thank M J Bhaseen, J Chalker, B Doyon, V Gritsev, A Lamacraft,\r\nA Michailidis and M Serbyn for helpful feedback and stimulating conversations. S D N\r\nacknowledges funding from the Institute of Science and Technology (IST) Austria, and\r\nfrom the European Union’s Horizon 2020 research and innovation program under the\r\nMarie Sk\blodowska-Curie Grant Agreement No. 754411. S D N also acknowledges funding\r\nfrom the EPSRC Center for Doctoral Training in Cross-Disciplinary Approaches to Non-\r\nEquilibrium Systems (CANES) under Grant EP/L015854/1. S D N is grateful to IST\r\nAustria for providing open access funding.","publication_identifier":{"issn":["1742-5468"]},"doi":"10.1088/1742-5468/abc7c7","month":"01","citation":{"ista":"De Nicola S. 2021. Disentanglement approach to quantum spin ground states: Field theory and stochastic simulation. Journal of Statistical Mechanics: Theory and Experiment. 2021(1), 013101.","apa":"De Nicola, S. (2021). Disentanglement approach to quantum spin ground states: Field theory and stochastic simulation. <i>Journal of Statistical Mechanics: Theory and Experiment</i>. IOP Publishing. <a href=\"https://doi.org/10.1088/1742-5468/abc7c7\">https://doi.org/10.1088/1742-5468/abc7c7</a>","ieee":"S. De Nicola, “Disentanglement approach to quantum spin ground states: Field theory and stochastic simulation,” <i>Journal of Statistical Mechanics: Theory and Experiment</i>, vol. 2021, no. 1. IOP Publishing, 2021.","ama":"De Nicola S. Disentanglement approach to quantum spin ground states: Field theory and stochastic simulation. <i>Journal of Statistical Mechanics: Theory and Experiment</i>. 2021;2021(1). doi:<a href=\"https://doi.org/10.1088/1742-5468/abc7c7\">10.1088/1742-5468/abc7c7</a>","short":"S. De Nicola, Journal of Statistical Mechanics: Theory and Experiment 2021 (2021).","chicago":"De Nicola, Stefano. “Disentanglement Approach to Quantum Spin Ground States: Field Theory and Stochastic Simulation.” <i>Journal of Statistical Mechanics: Theory and Experiment</i>. IOP Publishing, 2021. <a href=\"https://doi.org/10.1088/1742-5468/abc7c7\">https://doi.org/10.1088/1742-5468/abc7c7</a>.","mla":"De Nicola, Stefano. “Disentanglement Approach to Quantum Spin Ground States: Field Theory and Stochastic Simulation.” <i>Journal of Statistical Mechanics: Theory and Experiment</i>, vol. 2021, no. 1, 013101, IOP Publishing, 2021, doi:<a href=\"https://doi.org/10.1088/1742-5468/abc7c7\">10.1088/1742-5468/abc7c7</a>."},"file_date_updated":"2021-02-19T14:04:40Z","keyword":["Statistics","Probability and Uncertainty","Statistics and Probability","Statistical and Nonlinear Physics"],"day":"05","type":"journal_article","ec_funded":1,"language":[{"iso":"eng"}],"file":[{"date_updated":"2021-02-19T14:04:40Z","date_created":"2021-02-19T14:04:40Z","content_type":"application/pdf","file_name":"2021_JourStatMech_deNicola.pdf","creator":"dernst","checksum":"64e2aae4837790db26e1dd1986c69c07","access_level":"open_access","file_id":"9172","relation":"main_file","file_size":1693609,"success":1}],"date_published":"2021-01-05T00:00:00Z","volume":2021,"quality_controlled":"1","title":"Disentanglement approach to quantum spin ground states: Field theory and stochastic simulation","author":[{"last_name":"De Nicola","first_name":"Stefano","id":"42832B76-F248-11E8-B48F-1D18A9856A87","full_name":"De Nicola, Stefano","orcid":"0000-0002-4842-6671"}],"date_created":"2021-02-17T17:48:46Z","oa":1,"article_type":"original","project":[{"call_identifier":"H2020","name":"ISTplus - Postdoctoral Fellowships","_id":"260C2330-B435-11E9-9278-68D0E5697425","grant_number":"754411"},{"_id":"B67AFEDC-15C9-11EA-A837-991A96BB2854","name":"IST Austria Open Access Fund"}],"has_accepted_license":"1","_id":"9158","ddc":["530"],"scopus_import":"1","intvolume":"      2021","publication":"Journal of Statistical Mechanics: Theory and Experiment","isi":1,"publisher":"IOP Publishing"},{"arxiv":1,"language":[{"iso":"eng"}],"date_published":"2021-03-01T00:00:00Z","volume":167,"quality_controlled":"1","title":"Pathologies of the Hilbert scheme of points of a supersingular Enriques surface","author":[{"first_name":"Tanya K","last_name":"Srivastava","id":"4D046628-F248-11E8-B48F-1D18A9856A87","full_name":"Srivastava, Tanya K"}],"date_created":"2021-02-21T23:01:20Z","oa":1,"project":[{"grant_number":"754411","_id":"260C2330-B435-11E9-9278-68D0E5697425","name":"ISTplus - Postdoctoral Fellowships","call_identifier":"H2020"}],"article_type":"original","_id":"9173","scopus_import":"1","intvolume":"       167","publication":"Bulletin des Sciences Mathematiques","isi":1,"publisher":"Elsevier","article_number":"102957","date_updated":"2025-04-14T07:43:51Z","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","oa_version":"Preprint","article_processing_charge":"No","publication_status":"published","department":[{"_id":"TaHa"}],"fulldoi":"https://doi.org/10.1016/j.bulsci.2021.102957","external_id":{"isi":["000623881600009"],"arxiv":["2010.08976"]},"abstract":[{"text":"We show that Hilbert schemes of points on supersingular Enriques surface in characteristic 2, Hilbn(X), for n ≥ 2 are simply connected, symplectic varieties but are not irreducible symplectic as the hodge number h2,0 > 1, even though a supersingular Enriques surface is an irreducible symplectic variety. These are the classes of varieties which appear only in characteristic 2 and they show that the hodge number formula for G¨ottsche-Soergel does not hold over haracteristic 2. It also gives examples of varieties with trivial canonical class which are neither irreducible symplectic nor Calabi-Yau, thereby showing that there are strictly more classes of simply connected varieties with trivial canonical class in characteristic 2 than over C as given by Beauville-Bogolomov decomposition theorem.","lang":"eng"}],"issue":"03","year":"2021","status":"public","acknowledgement":"I would like to thank M. Zdanwociz for various mathematical discussions which lead to this article, Tamas Hausel for hosting me in his research group at IST Austria and the anonymous referee for their helpful suggestions and comments. This research has received funding from the European Union's Horizon 2020 Marie Sklodowska-Curie Actions Grant No. 754411 and Institue of Science and Technology Austria IST-PLUS Grant No. 754411.","publication_identifier":{"issn":["0007-4497"]},"doi":"10.1016/j.bulsci.2021.102957","month":"03","citation":{"apa":"Srivastava, T. K. (2021). Pathologies of the Hilbert scheme of points of a supersingular Enriques surface. <i>Bulletin Des Sciences Mathematiques</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.bulsci.2021.102957\">https://doi.org/10.1016/j.bulsci.2021.102957</a>","ieee":"T. K. Srivastava, “Pathologies of the Hilbert scheme of points of a supersingular Enriques surface,” <i>Bulletin des Sciences Mathematiques</i>, vol. 167, no. 03. Elsevier, 2021.","ama":"Srivastava TK. Pathologies of the Hilbert scheme of points of a supersingular Enriques surface. <i>Bulletin des Sciences Mathematiques</i>. 2021;167(03). doi:<a href=\"https://doi.org/10.1016/j.bulsci.2021.102957\">10.1016/j.bulsci.2021.102957</a>","ista":"Srivastava TK. 2021. Pathologies of the Hilbert scheme of points of a supersingular Enriques surface. Bulletin des Sciences Mathematiques. 167(03), 102957.","chicago":"Srivastava, Tanya K. “Pathologies of the Hilbert Scheme of Points of a Supersingular Enriques Surface.” <i>Bulletin Des Sciences Mathematiques</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.bulsci.2021.102957\">https://doi.org/10.1016/j.bulsci.2021.102957</a>.","mla":"Srivastava, Tanya K. “Pathologies of the Hilbert Scheme of Points of a Supersingular Enriques Surface.” <i>Bulletin Des Sciences Mathematiques</i>, vol. 167, no. 03, 102957, Elsevier, 2021, doi:<a href=\"https://doi.org/10.1016/j.bulsci.2021.102957\">10.1016/j.bulsci.2021.102957</a>.","short":"T.K. Srivastava, Bulletin Des Sciences Mathematiques 167 (2021)."},"day":"01","type":"journal_article","ec_funded":1,"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/2010.08976"}]},{"date_updated":"2025-04-14T07:43:04Z","article_number":"104986","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","article_processing_charge":"Yes (via OA deal)","oa_version":"Published Version","publication_status":"published","department":[{"_id":"SiHi"}],"fulldoi":"https://doi.org/10.1016/j.neuint.2021.104986","external_id":{"pmid":["33600873"],"isi":["000635575000005"]},"issue":"5","abstract":[{"lang":"eng","text":"Genomic imprinting is an epigenetic mechanism that results in parental allele-specific expression of ~1% of all genes in mouse and human. Imprinted genes are key developmental regulators and play pivotal roles in many biological processes such as nutrient transfer from the mother to offspring and neuronal development. Imprinted genes are also involved in human disease, including neurodevelopmental disorders, and often occur in clusters that are regulated by a common imprint control region (ICR). In extra-embryonic tissues ICRs can act over large distances, with the largest surrounding Igf2r spanning over 10 million base-pairs. Besides classical imprinted expression that shows near exclusive maternal or paternal expression, widespread biased imprinted expression has been identified mainly in brain. In this review we discuss recent developments mapping cell type specific imprinted expression in extra-embryonic tissues and neocortex in the mouse. We highlight the advantages of using an inducible uniparental chromosome disomy (UPD) system to generate cells carrying either two maternal or two paternal copies of a specific chromosome to analyze the functional consequences of genomic imprinting. Mosaic Analysis with Double Markers (MADM) allows fluorescent labeling and concomitant induction of UPD sparsely in specific cell types, and thus to over-express or suppress all imprinted genes on that chromosome. To illustrate the utility of this technique, we explain how MADM-induced UPD revealed new insights about the function of the well-studied Cdkn1c imprinted gene, and how MADM-induced UPDs led to identification of highly cell type specific phenotypes related to perturbed imprinted expression in the mouse neocortex. Finally, we give an outlook on how MADM could be used to probe cell type specific imprinted expression in other tissues in mouse, particularly in extra-embryonic tissues."}],"tmp":{"legal_code_url":"https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode","image":"/images/cc_by_nc_nd.png","name":"Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International (CC BY-NC-ND 4.0)","short":"CC BY-NC-ND (4.0)"},"acknowledgement":"We thank Melissa Stouffer for critically reading the manuscript. This work was supported by IST Austria institutional funds; NÖ Forschung und Bildung n[f + b] life science call grant (C13-002) to S.H. and the European Research Council (ERC) under the European Union's Horizon 2020 research and innovation program (grant agreement 725780 LinPro) to S.H.","status":"public","year":"2021","publication_identifier":{"issn":["0197-0186"]},"doi":"10.1016/j.neuint.2021.104986","month":"05","citation":{"chicago":"Pauler, Florian, Quanah Hudson, Susanne Laukoter, and Simon Hippenmeyer. “Inducible Uniparental Chromosome Disomy to Probe Genomic Imprinting at Single-Cell Level in Brain and Beyond.” <i>Neurochemistry International</i>. Elsevier, 2021. <a href=\"https://doi.org/10.1016/j.neuint.2021.104986\">https://doi.org/10.1016/j.neuint.2021.104986</a>.","mla":"Pauler, Florian, et al. “Inducible Uniparental Chromosome Disomy to Probe Genomic Imprinting at Single-Cell Level in Brain and Beyond.” <i>Neurochemistry International</i>, vol. 145, no. 5, 104986, Elsevier, 2021, doi:<a href=\"https://doi.org/10.1016/j.neuint.2021.104986\">10.1016/j.neuint.2021.104986</a>.","short":"F. Pauler, Q. Hudson, S. Laukoter, S. Hippenmeyer, Neurochemistry International 145 (2021).","ieee":"F. Pauler, Q. Hudson, S. Laukoter, and S. Hippenmeyer, “Inducible uniparental chromosome disomy to probe genomic imprinting at single-cell level in brain and beyond,” <i>Neurochemistry International</i>, vol. 145, no. 5. Elsevier, 2021.","ama":"Pauler F, Hudson Q, Laukoter S, Hippenmeyer S. Inducible uniparental chromosome disomy to probe genomic imprinting at single-cell level in brain and beyond. <i>Neurochemistry International</i>. 2021;145(5). doi:<a href=\"https://doi.org/10.1016/j.neuint.2021.104986\">10.1016/j.neuint.2021.104986</a>","apa":"Pauler, F., Hudson, Q., Laukoter, S., &#38; Hippenmeyer, S. (2021). Inducible uniparental chromosome disomy to probe genomic imprinting at single-cell level in brain and beyond. <i>Neurochemistry International</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.neuint.2021.104986\">https://doi.org/10.1016/j.neuint.2021.104986</a>","ista":"Pauler F, Hudson Q, Laukoter S, Hippenmeyer S. 2021. Inducible uniparental chromosome disomy to probe genomic imprinting at single-cell level in brain and beyond. Neurochemistry International. 145(5), 104986."},"day":"01","type":"journal_article","keyword":["Cell Biology","Cellular and Molecular Neuroscience"],"file_date_updated":"2021-08-11T12:30:38Z","ec_funded":1,"language":[{"iso":"eng"}],"date_published":"2021-05-01T00:00:00Z","file":[{"access_level":"open_access","checksum":"c6d7a40089cd29e289f9b22e75768304","relation":"main_file","file_id":"9883","file_size":7083499,"success":1,"date_created":"2021-08-11T12:30:38Z","date_updated":"2021-08-11T12:30:38Z","content_type":"application/pdf","creator":"kschuh","file_name":"2021_NCI_Pauler.pdf"}],"quality_controlled":"1","pmid":1,"volume":145,"author":[{"id":"48EA0138-F248-11E8-B48F-1D18A9856A87","last_name":"Pauler","first_name":"Florian","orcid":"0000-0002-7462-0048","full_name":"Pauler, Florian"},{"last_name":"Hudson","first_name":"Quanah","full_name":"Hudson, Quanah"},{"last_name":"Laukoter","first_name":"Susanne","id":"2D6B7A9A-F248-11E8-B48F-1D18A9856A87","full_name":"Laukoter, Susanne","orcid":"0000-0002-7903-3010"},{"orcid":"0000-0003-2279-1061","full_name":"Hippenmeyer, Simon","id":"37B36620-F248-11E8-B48F-1D18A9856A87","last_name":"Hippenmeyer","first_name":"Simon"}],"title":"Inducible uniparental chromosome disomy to probe genomic imprinting at single-cell level in brain and beyond","oa":1,"date_created":"2021-02-23T12:31:43Z","has_accepted_license":"1","article_type":"original","project":[{"call_identifier":"H2020","name":"Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development","_id":"260018B0-B435-11E9-9278-68D0E5697425","grant_number":"725780"},{"_id":"25D92700-B435-11E9-9278-68D0E5697425","grant_number":"LS13-002","name":"Mapping Cell-Type Specificity of the Genomic Imprintome in the Brain"}],"ddc":["570"],"_id":"9188","publication":"Neurochemistry International","intvolume":"       145","scopus_import":"1","publisher":"Elsevier","isi":1},{"language":[{"iso":"eng"}],"file":[{"date_created":"2023-11-02T17:02:11Z","date_updated":"2023-11-02T17:02:11Z","content_type":"application/pdf","file_name":"Zhao PlantCellEnv 2021_accepted.pdf","creator":"amally","access_level":"open_access","checksum":"a812418fede076741c9c4dc07f317068","file_id":"14481","relation":"main_file","success":1,"file_size":8437528}],"date_published":"2021-06-01T00:00:00Z","volume":44,"pmid":1,"quality_controlled":"1","author":[{"full_name":"Zhao, Y","last_name":"Zhao","first_name":"Y"},{"full_name":"Wu, L","last_name":"Wu","first_name":"L"},{"full_name":"Fu, Q","last_name":"Fu","first_name":"Q"},{"first_name":"D","last_name":"Wang","full_name":"Wang, D"},{"first_name":"J","last_name":"Li","full_name":"Li, J"},{"full_name":"Yao, B","first_name":"B","last_name":"Yao"},{"first_name":"S","last_name":"Yu","full_name":"Yu, S"},{"full_name":"Jiang, L","last_name":"Jiang","first_name":"L"},{"full_name":"Qian, J","last_name":"Qian","first_name":"J"},{"first_name":"X","last_name":"Zhou","full_name":"Zhou, X"},{"full_name":"Han, L","first_name":"L","last_name":"Han"},{"full_name":"Zhao, S","first_name":"S","last_name":"Zhao"},{"full_name":"Ma, C","last_name":"Ma","first_name":"C"},{"full_name":"Zhang, Y","first_name":"Y","last_name":"Zhang"},{"last_name":"Luo","first_name":"C","full_name":"Luo, C"},{"full_name":"Dong, Q","last_name":"Dong","first_name":"Q"},{"first_name":"S","last_name":"Li","full_name":"Li, S"},{"first_name":"L","last_name":"Zhang","full_name":"Zhang, L"},{"full_name":"Jiang, X","last_name":"Jiang","first_name":"X"},{"first_name":"Y","last_name":"Li","full_name":"Li, Y"},{"full_name":"Luo, H","last_name":"Luo","first_name":"H"},{"last_name":"Li","first_name":"K","full_name":"Li, K"},{"last_name":"Yang","first_name":"J","full_name":"Yang, J"},{"last_name":"Luo","first_name":"Q","full_name":"Luo, Q"},{"last_name":"Li","first_name":"L","full_name":"Li, L"},{"first_name":"S","last_name":"Peng","full_name":"Peng, S"},{"first_name":"H","last_name":"Huang","full_name":"Huang, H"},{"first_name":"Z","last_name":"Zuo","full_name":"Zuo, Z"},{"first_name":"C","last_name":"Liu","full_name":"Liu, C"},{"first_name":"L","last_name":"Wang","full_name":"Wang, L"},{"last_name":"Li","first_name":"C","full_name":"Li, C"},{"last_name":"He","first_name":"X","full_name":"He, X"},{"id":"4159519E-F248-11E8-B48F-1D18A9856A87","last_name":"Friml","first_name":"Jiří","orcid":"0000-0002-8302-7596","full_name":"Friml, Jiří"},{"last_name":"Du","first_name":"Y","full_name":"Du, Y"}],"title":"INDITTO2 transposon conveys auxin-mediated DRO1 transcription for rice drought avoidance","oa":1,"date_created":"2021-02-24T10:07:21Z","article_type":"original","has_accepted_license":"1","_id":"9189","ddc":["580"],"page":"1846-1857","intvolume":"        44","scopus_import":"1","publication":"Plant, Cell & Environment","isi":1,"publisher":"Wiley","date_updated":"2023-11-07T08:18:36Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","oa_version":"Submitted Version","article_processing_charge":"No","publication_status":"published","department":[{"_id":"JiFr"}],"fulldoi":"https://doi.org/10.1111/pce.14029","external_id":{"pmid":["33576018"],"isi":["000625398600001"]},"abstract":[{"lang":"eng","text":"Transposable elements exist widely throughout plant genomes and play important roles in plant evolution. Auxin is an important regulator that is traditionally associated with root development and drought stress adaptation. The DEEPER ROOTING 1 (DRO1) gene is a key component of rice drought avoidance. Here, we identified a transposon that acts as an autonomous auxin‐responsive promoter and its presence at specific genome positions conveys physiological adaptations related to drought avoidance. Rice varieties with high and auxin‐mediated transcription of DRO1 in the root tip show deeper and longer root phenotypes and are thus better adapted to drought. The INDITTO2 transposon contains an auxin response element and displays auxin‐responsive promoter activity; it is thus able to convey auxin regulation of transcription to genes in its proximity. In the rice Acuce, which displays DRO1‐mediated drought adaptation, the INDITTO2 transposon was found to be inserted at the promoter region of the DRO1 locus. Transgenesis‐based insertion of the INDITTO2 transposon into the DRO1 promoter of the non‐adapted rice variety Nipponbare was sufficient to promote its drought avoidance. Our data identify an example of how transposons can act as promoters and convey hormonal regulation to nearby loci, improving plant fitness in response to different abiotic stresses."}],"issue":"6","year":"2021","status":"public","publication_identifier":{"issn":["0140-7791"],"eissn":["1365-3040"]},"doi":"10.1111/pce.14029","month":"06","citation":{"ista":"Zhao Y, Wu L, Fu Q, Wang D, Li J, Yao B, Yu S, Jiang L, Qian J, Zhou X, Han L, Zhao S, Ma C, Zhang Y, Luo C, Dong Q, Li S, Zhang L, Jiang X, Li Y, Luo H, Li K, Yang J, Luo Q, Li L, Peng S, Huang H, Zuo Z, Liu C, Wang L, Li C, He X, Friml J, Du Y. 2021. INDITTO2 transposon conveys auxin-mediated DRO1 transcription for rice drought avoidance. Plant, Cell &#38; Environment. 44(6), 1846–1857.","apa":"Zhao, Y., Wu, L., Fu, Q., Wang, D., Li, J., Yao, B., … Du, Y. (2021). INDITTO2 transposon conveys auxin-mediated DRO1 transcription for rice drought avoidance. <i>Plant, Cell &#38; Environment</i>. Wiley. <a href=\"https://doi.org/10.1111/pce.14029\">https://doi.org/10.1111/pce.14029</a>","ieee":"Y. Zhao <i>et al.</i>, “INDITTO2 transposon conveys auxin-mediated DRO1 transcription for rice drought avoidance,” <i>Plant, Cell &#38; Environment</i>, vol. 44, no. 6. Wiley, pp. 1846–1857, 2021.","ama":"Zhao Y, Wu L, Fu Q, et al. INDITTO2 transposon conveys auxin-mediated DRO1 transcription for rice drought avoidance. <i>Plant, Cell &#38; Environment</i>. 2021;44(6):1846-1857. doi:<a href=\"https://doi.org/10.1111/pce.14029\">10.1111/pce.14029</a>","short":"Y. Zhao, L. Wu, Q. Fu, D. Wang, J. Li, B. Yao, S. Yu, L. Jiang, J. Qian, X. Zhou, L. Han, S. Zhao, C. Ma, Y. Zhang, C. Luo, Q. Dong, S. Li, L. Zhang, X. Jiang, Y. Li, H. Luo, K. Li, J. Yang, Q. Luo, L. Li, S. Peng, H. Huang, Z. Zuo, C. Liu, L. Wang, C. Li, X. He, J. Friml, Y. Du, Plant, Cell &#38; Environment 44 (2021) 1846–1857.","chicago":"Zhao, Y, L Wu, Q Fu, D Wang, J Li, B Yao, S Yu, et al. “INDITTO2 Transposon Conveys Auxin-Mediated DRO1 Transcription for Rice Drought Avoidance.” <i>Plant, Cell &#38; Environment</i>. Wiley, 2021. <a href=\"https://doi.org/10.1111/pce.14029\">https://doi.org/10.1111/pce.14029</a>.","mla":"Zhao, Y., et al. “INDITTO2 Transposon Conveys Auxin-Mediated DRO1 Transcription for Rice Drought Avoidance.” <i>Plant, Cell &#38; Environment</i>, vol. 44, no. 6, Wiley, 2021, pp. 1846–57, doi:<a href=\"https://doi.org/10.1111/pce.14029\">10.1111/pce.14029</a>."},"file_date_updated":"2023-11-02T17:02:11Z","day":"01","type":"journal_article"}]