[{"publication_identifier":{"issn":["0022-1236"],"eissn":["1096-0783"]},"volume":278,"scopus_import":"1","month":"07","isi":1,"citation":{"mla":"Erdös, László, et al. “Local Laws for Polynomials of Wigner Matrices.” <i>Journal of Functional Analysis</i>, vol. 278, no. 12, 108507, Elsevier, 2020, doi:<a href=\"https://doi.org/10.1016/j.jfa.2020.108507\">10.1016/j.jfa.2020.108507</a>.","ieee":"L. Erdös, T. H. Krüger, and Y. Nemish, “Local laws for polynomials of Wigner matrices,” <i>Journal of Functional Analysis</i>, vol. 278, no. 12. Elsevier, 2020.","apa":"Erdös, L., Krüger, T. H., &#38; Nemish, Y. (2020). Local laws for polynomials of Wigner matrices. <i>Journal of Functional Analysis</i>. Elsevier. <a href=\"https://doi.org/10.1016/j.jfa.2020.108507\">https://doi.org/10.1016/j.jfa.2020.108507</a>","ama":"Erdös L, Krüger TH, Nemish Y. Local laws for polynomials of Wigner matrices. <i>Journal of Functional Analysis</i>. 2020;278(12). doi:<a href=\"https://doi.org/10.1016/j.jfa.2020.108507\">10.1016/j.jfa.2020.108507</a>","chicago":"Erdös, László, Torben H Krüger, and Yuriy Nemish. “Local Laws for Polynomials of Wigner Matrices.” <i>Journal of Functional Analysis</i>. Elsevier, 2020. <a href=\"https://doi.org/10.1016/j.jfa.2020.108507\">https://doi.org/10.1016/j.jfa.2020.108507</a>.","ista":"Erdös L, Krüger TH, Nemish Y. 2020. Local laws for polynomials of Wigner matrices. Journal of Functional Analysis. 278(12), 108507.","short":"L. Erdös, T.H. Krüger, Y. Nemish, Journal of Functional Analysis 278 (2020)."},"article_processing_charge":"No","author":[{"last_name":"Erdös","id":"4DBD5372-F248-11E8-B48F-1D18A9856A87","first_name":"László","orcid":"0000-0001-5366-9603","full_name":"Erdös, László"},{"last_name":"Krüger","id":"3020C786-F248-11E8-B48F-1D18A9856A87","first_name":"Torben H","orcid":"0000-0002-4821-3297","full_name":"Krüger, Torben H"},{"full_name":"Nemish, Yuriy","orcid":"0000-0002-7327-856X","id":"4D902E6A-F248-11E8-B48F-1D18A9856A87","first_name":"Yuriy","last_name":"Nemish"}],"project":[{"_id":"258DCDE6-B435-11E9-9278-68D0E5697425","name":"Random matrices, universality and disordered quantum systems","call_identifier":"FP7","grant_number":"338804"}],"language":[{"iso":"eng"}],"arxiv":1,"acknowledgement":"The authors are grateful to Oskari Ajanki for his invaluable help at the initial stage of this project, to Serban Belinschi for useful discussions, to Alexander Tikhomirov for calling our attention to the model example in Section 6.2 and to the anonymous referee for suggesting to simplify certain proofs. Erdös: Partially funded by ERC Advanced Grant RANMAT No. 338804\r\n","oa":1,"quality_controlled":"1","day":"01","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1804.11340"}],"title":"Local laws for polynomials of Wigner matrices","publication_status":"published","publication":"Journal of Functional Analysis","abstract":[{"text":"We consider general self-adjoint polynomials in several independent random matrices whose entries are centered and have the same variance. We show that under certain conditions the local law holds up to the optimal scale, i.e., the eigenvalue density on scales just above the eigenvalue spacing follows the global density of states which is determined by free probability theory. We prove that these conditions hold for general homogeneous polynomials of degree two and for symmetrized products of independent matrices with i.i.d. entries, thus establishing the optimal bulk local law for these classes of ensembles. In particular, we generalize a similar result of Anderson for anticommutator. For more general polynomials our conditions are effectively checkable numerically.","lang":"eng"}],"intvolume":"       278","ec_funded":1,"article_type":"original","type":"journal_article","publisher":"Elsevier","year":"2020","issue":"12","status":"public","date_published":"2020-07-01T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-02-23T23:00:36Z","date_updated":"2025-07-10T11:54:43Z","external_id":{"isi":["000522798900001"],"arxiv":["1804.11340"]},"department":[{"_id":"LaEr"}],"article_number":"108507","_id":"7512","oa_version":"Preprint","doi":"10.1016/j.jfa.2020.108507"},{"tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"doi":"10.15479/AT:ISTA:7514","supervisor":[{"id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","first_name":"Robert","last_name":"Seiringer","full_name":"Seiringer, Robert","orcid":"0000-0002-6781-0521"}],"_id":"7514","file":[{"relation":"main_file","content_type":"application/pdf","date_created":"2020-02-24T09:15:06Z","date_updated":"2020-07-14T12:47:59Z","access_level":"open_access","checksum":"b4de7579ddc1dbdd44ff3f17c48395f6","file_id":"7515","file_name":"thesis.pdf","file_size":1563429,"creator":"dernst"},{"checksum":"ad7425867b52d7d9e72296e87bc9cb67","access_level":"closed","date_updated":"2020-07-14T12:47:59Z","creator":"dernst","file_size":2028038,"file_name":"thesis_source.zip","file_id":"7516","relation":"source_file","date_created":"2020-02-24T09:15:16Z","content_type":"application/x-zip-compressed"}],"alternative_title":["ISTA Thesis"],"oa_version":"Published Version","file_date_updated":"2020-07-14T12:47:59Z","department":[{"_id":"RoSe"},{"_id":"GradSch"}],"related_material":{"record":[{"relation":"part_of_dissertation","id":"7524","status":"public"}]},"date_updated":"2026-04-08T07:25:40Z","date_created":"2020-02-24T09:17:27Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","date_published":"2020-02-24T00:00:00Z","status":"public","license":"https://creativecommons.org/licenses/by/4.0/","year":"2020","ddc":["510"],"publisher":"Institute of Science and Technology Austria","type":"dissertation","ec_funded":1,"corr_author":"1","title":"The free energy of a dilute two-dimensional Bose gas","publication_status":"published","has_accepted_license":"1","abstract":[{"lang":"eng","text":"We study the interacting homogeneous Bose gas in two spatial dimensions in the thermodynamic limit at fixed density. We shall be concerned with some mathematical aspects of this complicated problem in many-body quantum mechanics. More specifically, we consider the dilute limit where the scattering length of the interaction potential, which is a measure for the effective range of the potential, is small compared to the average distance between the particles. We are interested in a setting with positive (i.e., non-zero) temperature. After giving a survey of the relevant literature in the field, we provide some facts and examples to set expectations for the two-dimensional system. The crucial difference to the three-dimensional system is that there is no Bose–Einstein condensate at positive temperature due to the Hohenberg–Mermin–Wagner theorem. However, it turns out that an asymptotic formula for the free energy holds similarly to the three-dimensional case.\r\nWe motivate this formula by considering a toy model with δ interaction potential. By restricting this model Hamiltonian to certain trial states with a quasi-condensate we obtain an upper bound for the free energy that still has the quasi-condensate fraction as a free parameter. When minimizing over the quasi-condensate fraction, we obtain the Berezinskii–Kosterlitz–Thouless critical temperature for superfluidity, which plays an important role in our rigorous contribution. The mathematically rigorous result that we prove concerns the specific free energy in the dilute limit. We give upper and lower bounds on the free energy in terms of the free energy of the non-interacting system and a correction term coming from the interaction. Both bounds match and thus we obtain the leading term of an asymptotic approximation in the dilute limit, provided the thermal wavelength of the particles is of the same order (or larger) than the average distance between the particles. The remarkable feature of this result is its generality: the correction term depends on the interaction potential only through its scattering length and it holds for all nonnegative interaction potentials with finite scattering length that are measurable. In particular, this allows to model an interaction of hard disks."}],"OA_place":"publisher","degree_awarded":"PhD","day":"24","oa":1,"citation":{"short":"S. Mayer, The Free Energy of a Dilute Two-Dimensional Bose Gas, Institute of Science and Technology Austria, 2020.","ama":"Mayer S. The free energy of a dilute two-dimensional Bose gas. 2020. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:7514\">10.15479/AT:ISTA:7514</a>","apa":"Mayer, S. (2020). <i>The free energy of a dilute two-dimensional Bose gas</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:7514\">https://doi.org/10.15479/AT:ISTA:7514</a>","ista":"Mayer S. 2020. The free energy of a dilute two-dimensional Bose gas. Institute of Science and Technology Austria.","chicago":"Mayer, Simon. “The Free Energy of a Dilute Two-Dimensional Bose Gas.” Institute of Science and Technology Austria, 2020. <a href=\"https://doi.org/10.15479/AT:ISTA:7514\">https://doi.org/10.15479/AT:ISTA:7514</a>.","ieee":"S. Mayer, “The free energy of a dilute two-dimensional Bose gas,” Institute of Science and Technology Austria, 2020.","mla":"Mayer, Simon. <i>The Free Energy of a Dilute Two-Dimensional Bose Gas</i>. Institute of Science and Technology Austria, 2020, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:7514\">10.15479/AT:ISTA:7514</a>."},"article_processing_charge":"No","page":"148","project":[{"_id":"25C6DC12-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"Analysis of quantum many-body systems","grant_number":"694227"}],"language":[{"iso":"eng"}],"author":[{"full_name":"Mayer, Simon","id":"30C4630A-F248-11E8-B48F-1D18A9856A87","first_name":"Simon","last_name":"Mayer"}],"month":"02","publication_identifier":{"issn":["2663-337X"]}},{"date_published":"2020-02-21T00:00:00Z","status":"public","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","date_created":"2020-02-27T10:26:57Z","publisher":"American Physical Society","article_type":"original","type":"journal_article","year":"2020","issue":"2","_id":"7534","article_number":"023903","oa_version":"Preprint","doi":"10.1103/physrevfluids.5.023903","date_updated":"2023-08-18T06:44:46Z","external_id":{"isi":["000515065100001"],"arxiv":["1912.09270"]},"department":[{"_id":"BjHo"}],"article_processing_charge":"No","citation":{"short":"N.B. Budanur, E. Marensi, A.P. Willis, B. Hof, Physical Review Fluids 5 (2020).","ama":"Budanur NB, Marensi E, Willis AP, Hof B. Upper edge of chaos and the energetics of transition in pipe flow. <i>Physical Review Fluids</i>. 2020;5(2). doi:<a href=\"https://doi.org/10.1103/physrevfluids.5.023903\">10.1103/physrevfluids.5.023903</a>","apa":"Budanur, N. B., Marensi, E., Willis, A. P., &#38; Hof, B. (2020). Upper edge of chaos and the energetics of transition in pipe flow. <i>Physical Review Fluids</i>. American Physical Society. <a href=\"https://doi.org/10.1103/physrevfluids.5.023903\">https://doi.org/10.1103/physrevfluids.5.023903</a>","chicago":"Budanur, Nazmi B, Elena Marensi, Ashley P. Willis, and Björn Hof. “Upper Edge of Chaos and the Energetics of Transition in Pipe Flow.” <i>Physical Review Fluids</i>. American Physical Society, 2020. <a href=\"https://doi.org/10.1103/physrevfluids.5.023903\">https://doi.org/10.1103/physrevfluids.5.023903</a>.","ista":"Budanur NB, Marensi E, Willis AP, Hof B. 2020. Upper edge of chaos and the energetics of transition in pipe flow. Physical Review Fluids. 5(2), 023903.","mla":"Budanur, Nazmi B., et al. “Upper Edge of Chaos and the Energetics of Transition in Pipe Flow.” <i>Physical Review Fluids</i>, vol. 5, no. 2, 023903, American Physical Society, 2020, doi:<a href=\"https://doi.org/10.1103/physrevfluids.5.023903\">10.1103/physrevfluids.5.023903</a>.","ieee":"N. B. Budanur, E. Marensi, A. P. Willis, and B. Hof, “Upper edge of chaos and the energetics of transition in pipe flow,” <i>Physical Review Fluids</i>, vol. 5, no. 2. American Physical Society, 2020."},"isi":1,"language":[{"iso":"eng"}],"author":[{"orcid":"0000-0003-0423-5010","full_name":"Budanur, Nazmi B","last_name":"Budanur","first_name":"Nazmi B","id":"3EA1010E-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Marensi","first_name":"Elena","full_name":"Marensi, Elena"},{"first_name":"Ashley P.","last_name":"Willis","full_name":"Willis, Ashley P."},{"id":"3A374330-F248-11E8-B48F-1D18A9856A87","first_name":"Björn","last_name":"Hof","full_name":"Hof, Björn","orcid":"0000-0003-2057-2754"}],"arxiv":1,"oa":1,"publication_identifier":{"issn":["2469-990X"]},"month":"02","scopus_import":"1","volume":5,"title":"Upper edge of chaos and the energetics of transition in pipe flow","publication_status":"published","intvolume":"         5","abstract":[{"lang":"eng","text":"In the past two decades, our understanding of the transition to turbulence in shear flows with linearly stable laminar solutions has greatly improved. Regarding the susceptibility of the laminar flow, two concepts have been particularly useful: the edge states and the minimal seeds. In this nonlinear picture of the transition, the basin boundary of turbulence is set by the edge state's stable manifold and this manifold comes closest in energy to the laminar equilibrium at the minimal seed. We begin this paper by presenting numerical experiments in which three-dimensional perturbations are too energetic to trigger turbulence in pipe flow but they do lead to turbulence when their amplitude is reduced. We show that this seemingly counterintuitive observation is in fact consistent with the fully nonlinear description of the transition mediated by the edge state. In order to understand the physical mechanisms behind this process, we measure the turbulent kinetic energy production and dissipation rates as a function of the radial coordinate. Our main observation is that the transition to turbulence relies on the energy amplification away from the wall, as opposed to the turbulence itself, whose energy is predominantly produced near the wall. This observation is further supported by the similar analyses on the minimal seeds and the edge states. Furthermore, we show that the time evolution of production-over-dissipation curves provides a clear distinction between the different initial amplification stages of the transition to turbulence from the minimal seed."}],"publication":"Physical Review Fluids","quality_controlled":"1","day":"21","main_file_link":[{"url":"https://arxiv.org/abs/1912.09270","open_access":"1"}]},{"article_type":"original","type":"journal_article","publisher":"Brill","year":"2020","issue":"1-2","status":"public","date_published":"2020-02-01T00:00:00Z","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","date_created":"2020-02-28T09:18:01Z","date_updated":"2023-08-18T06:45:15Z","external_id":{"isi":["000525343300004"]},"department":[{"_id":"JiFr"}],"_id":"7540","oa_version":"None","doi":"10.1163/22238980-20191110","publication_identifier":{"eissn":["2223-8980"],"issn":["0792-9978"]},"volume":67,"scopus_import":"1","month":"02","page":"16-26","article_processing_charge":"No","citation":{"short":"I. Verstraeten, H. Buyle, S. Werbrouck, M.C. Van Labeke, D. Geelen, Israel Journal of Plant Sciences 67 (2020) 16–26.","apa":"Verstraeten, I., Buyle, H., Werbrouck, S., Van Labeke, M. C., &#38; Geelen, D. (2020). In vitro shoot growth and adventitious rooting of Wikstroemia gemmata depends on light quality. <i>Israel Journal of Plant Sciences</i>. Brill. <a href=\"https://doi.org/10.1163/22238980-20191110\">https://doi.org/10.1163/22238980-20191110</a>","ama":"Verstraeten I, Buyle H, Werbrouck S, Van Labeke MC, Geelen D. In vitro shoot growth and adventitious rooting of Wikstroemia gemmata depends on light quality. <i>Israel Journal of Plant Sciences</i>. 2020;67(1-2):16-26. doi:<a href=\"https://doi.org/10.1163/22238980-20191110\">10.1163/22238980-20191110</a>","ista":"Verstraeten I, Buyle H, Werbrouck S, Van Labeke MC, Geelen D. 2020. In vitro shoot growth and adventitious rooting of Wikstroemia gemmata depends on light quality. Israel Journal of Plant Sciences. 67(1–2), 16–26.","chicago":"Verstraeten, Inge, H. Buyle, S. Werbrouck, M.C. Van Labeke, and D. Geelen. “In Vitro Shoot Growth and Adventitious Rooting of Wikstroemia Gemmata Depends on Light Quality.” <i>Israel Journal of Plant Sciences</i>. Brill, 2020. <a href=\"https://doi.org/10.1163/22238980-20191110\">https://doi.org/10.1163/22238980-20191110</a>.","mla":"Verstraeten, Inge, et al. “In Vitro Shoot Growth and Adventitious Rooting of Wikstroemia Gemmata Depends on Light Quality.” <i>Israel Journal of Plant Sciences</i>, vol. 67, no. 1–2, Brill, 2020, pp. 16–26, doi:<a href=\"https://doi.org/10.1163/22238980-20191110\">10.1163/22238980-20191110</a>.","ieee":"I. Verstraeten, H. Buyle, S. Werbrouck, M. C. Van Labeke, and D. Geelen, “In vitro shoot growth and adventitious rooting of Wikstroemia gemmata depends on light quality,” <i>Israel Journal of Plant Sciences</i>, vol. 67, no. 1–2. Brill, pp. 16–26, 2020."},"isi":1,"author":[{"orcid":"0000-0001-7241-2328","full_name":"Verstraeten, Inge","last_name":"Verstraeten","id":"362BF7FE-F248-11E8-B48F-1D18A9856A87","first_name":"Inge"},{"first_name":"H.","last_name":"Buyle","full_name":"Buyle, H."},{"full_name":"Werbrouck, S.","last_name":"Werbrouck","first_name":"S."},{"full_name":"Van Labeke, M.C.","first_name":"M.C.","last_name":"Van Labeke"},{"full_name":"Geelen, D.","last_name":"Geelen","first_name":"D."}],"language":[{"iso":"eng"}],"quality_controlled":"1","day":"01","title":"In vitro shoot growth and adventitious rooting of Wikstroemia gemmata depends on light quality","publication_status":"published","publication":"Israel Journal of Plant Sciences","intvolume":"        67","abstract":[{"lang":"eng","text":" In vitro propagation of the ornamentally interesting species Wikstroemia gemmata is limited by the recalcitrance to form adventitious roots. In this article, two strategies to improve the rooting capacity of in vitro microcuttings are presented. Firstly, the effect of exogenous auxin was evaluated in both light and dark cultivated stem segments and also the sucrose-content of the medium was varied in order to determine better rooting conditions. Secondly, different spectral lights were evaluated and the effect on shoot growth and root induction demonstrated that the exact spectral composition of light is important for successful in vitro growth and development of Wikstroemia gemmata. We show that exogenous auxin cannot compensate for the poor rooting under unfavorable light conditions. Adapting the culture conditions is therefore paramount for successful industrial propagation of Wikstroemia gemmata. "}]},{"department":[{"_id":"GeKa"}],"external_id":{"pmid":["32105375"],"isi":["000516660900001"]},"related_material":{"record":[{"id":"9222","relation":"research_data","status":"public"},{"status":"public","relation":"dissertation_contains","id":"7996"},{"id":"17444","relation":"other","status":"public"}]},"date_updated":"2026-06-18T17:54:46Z","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"doi":"10.1002/adma.201906523","file_date_updated":"2020-11-20T10:11:35Z","oa_version":"Published Version","_id":"7541","article_number":"1906523","file":[{"checksum":"c622737dc295972065782558337124a2","date_updated":"2020-11-20T10:11:35Z","access_level":"open_access","creator":"dernst","file_id":"8782","file_name":"2020_AdvancedMaterials_Gao.pdf","file_size":5242880,"relation":"main_file","content_type":"application/pdf","success":1,"date_created":"2020-11-20T10:11:35Z"}],"ddc":["530"],"pmid":1,"acknowledged_ssus":[{"_id":"NanoFab"},{"_id":"M-Shop"}],"issue":"16","year":"2020","article_type":"original","type":"journal_article","publisher":"Wiley","date_created":"2020-02-28T09:47:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","status":"public","date_published":"2020-04-23T00:00:00Z","day":"23","quality_controlled":"1","ec_funded":1,"publication":"Advanced Materials","abstract":[{"text":"Semiconductor nanowires have been playing a crucial role in the development of nanoscale devices for the realization of spin qubits, Majorana fermions, single photon emitters, nanoprocessors, etc. The monolithic growth of site‐controlled nanowires is a prerequisite toward the next generation of devices that will require addressability and scalability. Here, combining top‐down nanofabrication and bottom‐up self‐assembly, the growth of Ge wires on prepatterned Si (001) substrates with controllable position, distance, length, and structure is reported. This is achieved by a novel growth process that uses a SiGe strain‐relaxation template and can be potentially generalized to other material combinations. Transport measurements show an electrically tunable spin–orbit coupling, with a spin–orbit length similar to that of III–V materials. Also, charge sensing between quantum dots in closely spaced wires is observed, which underlines their potential for the realization of advanced quantum devices. The reported results open a path toward scalable qubit devices using nanowires on silicon.","lang":"eng"}],"intvolume":"        32","has_accepted_license":"1","publication_status":"published","corr_author":"1","title":"Site-controlled uniform Ge/Si hut wires with electrically tunable spin-orbit coupling","volume":32,"scopus_import":"1","month":"04","publication_identifier":{"issn":["0935-9648"]},"oa":1,"acknowledgement":"This work was supported by the National Key R&D Program of China (Grant Nos. 2016YFA0301701 and 2016YFA0300600), the NSFC (Grant Nos. 11574356, 11434010, and 11404252), the Strategic Priority Research Program of CAS (Grant No. XDB30000000), the ERC Starting Grant No. 335497, the FWF P32235 project, and the European Union's Horizon 2020 research and innovation program under Grant Agreement #862046. This research was supported by the Scientific Service Units of IST Austria through resources provided by the MIBA Machine Shop and the nanofabrication facility. F.L. thanks support from DOE (Grant No. DE‐FG02‐04ER46148). H.H. thanks the Startup Funding from Xi'an Jiaotong University.","author":[{"last_name":"Gao","first_name":"Fei","full_name":"Gao, Fei"},{"full_name":"Wang, Jian-Huan","first_name":"Jian-Huan","last_name":"Wang"},{"full_name":"Watzinger, Hannes","last_name":"Watzinger","id":"35DF8E50-F248-11E8-B48F-1D18A9856A87","first_name":"Hannes"},{"full_name":"Hu, Hao","last_name":"Hu","first_name":"Hao"},{"last_name":"Rančić","first_name":"Marko J.","full_name":"Rančić, Marko J."},{"first_name":"Jie-Yin","last_name":"Zhang","full_name":"Zhang, Jie-Yin"},{"first_name":"Ting","last_name":"Wang","full_name":"Wang, Ting"},{"full_name":"Yao, Yuan","last_name":"Yao","first_name":"Yuan"},{"first_name":"Gui-Lei","last_name":"Wang","full_name":"Wang, Gui-Lei"},{"full_name":"Kukucka, Josip","id":"3F5D8856-F248-11E8-B48F-1D18A9856A87","first_name":"Josip","last_name":"Kukucka"},{"orcid":"0000-0003-2424-8636","full_name":"Vukušić, Lada","last_name":"Vukušić","id":"31E9F056-F248-11E8-B48F-1D18A9856A87","first_name":"Lada"},{"first_name":"Christoph","last_name":"Kloeffel","full_name":"Kloeffel, Christoph"},{"last_name":"Loss","first_name":"Daniel","full_name":"Loss, Daniel"},{"last_name":"Liu","first_name":"Feng","full_name":"Liu, Feng"},{"last_name":"Katsaros","first_name":"Georgios","id":"38DB5788-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0001-8342-202X","full_name":"Katsaros, Georgios"},{"last_name":"Zhang","first_name":"Jian-Jun","full_name":"Zhang, Jian-Jun"}],"project":[{"call_identifier":"FP7","name":"Towards Spin qubits and Majorana fermions in Germanium self assembled hut-wires","_id":"25517E86-B435-11E9-9278-68D0E5697425","grant_number":"335497"},{"name":"Towards scalable hut wire quantum devices","call_identifier":"FWF","_id":"237B3DA4-32DE-11EA-91FC-C7463DDC885E","grant_number":"P32235"},{"call_identifier":"H2020","name":"TOPOLOGICALLY PROTECTED AND SCALABLE QUANTUM BITS","_id":"237E5020-32DE-11EA-91FC-C7463DDC885E","grant_number":"862046"}],"language":[{"iso":"eng"}],"isi":1,"article_processing_charge":"Yes (via OA deal)","citation":{"mla":"Gao, Fei, et al. “Site-Controlled Uniform Ge/Si Hut Wires with Electrically Tunable Spin-Orbit Coupling.” <i>Advanced Materials</i>, vol. 32, no. 16, 1906523, Wiley, 2020, doi:<a href=\"https://doi.org/10.1002/adma.201906523\">10.1002/adma.201906523</a>.","ieee":"F. Gao <i>et al.</i>, “Site-controlled uniform Ge/Si hut wires with electrically tunable spin-orbit coupling,” <i>Advanced Materials</i>, vol. 32, no. 16. Wiley, 2020.","short":"F. Gao, J.-H. Wang, H. Watzinger, H. Hu, M.J. Rančić, J.-Y. Zhang, T. Wang, Y. Yao, G.-L. Wang, J. Kukucka, L. Vukušić, C. Kloeffel, D. Loss, F. Liu, G. Katsaros, J.-J. Zhang, Advanced Materials 32 (2020).","chicago":"Gao, Fei, Jian-Huan Wang, Hannes Watzinger, Hao Hu, Marko J. Rančić, Jie-Yin Zhang, Ting Wang, et al. “Site-Controlled Uniform Ge/Si Hut Wires with Electrically Tunable Spin-Orbit Coupling.” <i>Advanced Materials</i>. Wiley, 2020. <a href=\"https://doi.org/10.1002/adma.201906523\">https://doi.org/10.1002/adma.201906523</a>.","ista":"Gao F, Wang J-H, Watzinger H, Hu H, Rančić MJ, Zhang J-Y, Wang T, Yao Y, Wang G-L, Kukucka J, Vukušić L, Kloeffel C, Loss D, Liu F, Katsaros G, Zhang J-J. 2020. Site-controlled uniform Ge/Si hut wires with electrically tunable spin-orbit coupling. Advanced Materials. 32(16), 1906523.","apa":"Gao, F., Wang, J.-H., Watzinger, H., Hu, H., Rančić, M. J., Zhang, J.-Y., … Zhang, J.-J. (2020). Site-controlled uniform Ge/Si hut wires with electrically tunable spin-orbit coupling. <i>Advanced Materials</i>. Wiley. <a href=\"https://doi.org/10.1002/adma.201906523\">https://doi.org/10.1002/adma.201906523</a>","ama":"Gao F, Wang J-H, Watzinger H, et al. Site-controlled uniform Ge/Si hut wires with electrically tunable spin-orbit coupling. <i>Advanced Materials</i>. 2020;32(16). doi:<a href=\"https://doi.org/10.1002/adma.201906523\">10.1002/adma.201906523</a>"}},{"date_created":"2020-02-28T10:43:39Z","user_id":"4359f0d1-fa6c-11eb-b949-802e58b17ae8","status":"public","date_published":"2020-01-08T00:00:00Z","ddc":["570"],"pmid":1,"issue":"1","year":"2020","article_type":"original","type":"journal_article","publisher":"Cell Press","doi":"10.1016/j.neuron.2019.10.001","tmp":{"short":"CC BY (4.0)","image":"/images/cc_by.png","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)"},"file_date_updated":"2020-07-14T12:48:00Z","oa_version":"Published Version","file":[{"date_created":"2020-03-02T15:43:57Z","content_type":"application/pdf","relation":"main_file","file_size":3294066,"file_name":"2020_Neuron_Beets.pdf","file_id":"7558","creator":"dernst","access_level":"open_access","date_updated":"2020-07-14T12:48:00Z","checksum":"799bfd297a008753a688b30d3958fa48"}],"_id":"7546","department":[{"_id":"MaDe"}],"external_id":{"isi":["000507341300012"],"pmid":["31757604"]},"date_updated":"2024-10-09T20:59:20Z","oa":1,"author":[{"full_name":"Beets, Isabel","last_name":"Beets","first_name":"Isabel"},{"first_name":"Gaotian","last_name":"Zhang","full_name":"Zhang, Gaotian"},{"full_name":"Fenk, Lorenz A.","first_name":"Lorenz A.","last_name":"Fenk"},{"full_name":"Chen, Changchun","first_name":"Changchun","last_name":"Chen"},{"last_name":"Nelson","first_name":"Geoffrey M.","full_name":"Nelson, Geoffrey M."},{"first_name":"Marie-Anne","last_name":"Félix","full_name":"Félix, Marie-Anne"},{"orcid":"0000-0001-8347-0443","full_name":"de Bono, Mario","last_name":"de Bono","id":"4E3FF80E-F248-11E8-B48F-1D18A9856A87","first_name":"Mario"}],"language":[{"iso":"eng"}],"page":"106-121.e10","isi":1,"citation":{"apa":"Beets, I., Zhang, G., Fenk, L. A., Chen, C., Nelson, G. M., Félix, M.-A., &#38; de Bono, M. (2020). Natural variation in a dendritic scaffold protein remodels experience-dependent plasticity by altering neuropeptide expression. <i>Neuron</i>. Cell Press. <a href=\"https://doi.org/10.1016/j.neuron.2019.10.001\">https://doi.org/10.1016/j.neuron.2019.10.001</a>","ama":"Beets I, Zhang G, Fenk LA, et al. Natural variation in a dendritic scaffold protein remodels experience-dependent plasticity by altering neuropeptide expression. <i>Neuron</i>. 2020;105(1):106-121.e10. doi:<a href=\"https://doi.org/10.1016/j.neuron.2019.10.001\">10.1016/j.neuron.2019.10.001</a>","ista":"Beets I, Zhang G, Fenk LA, Chen C, Nelson GM, Félix M-A, de Bono M. 2020. Natural variation in a dendritic scaffold protein remodels experience-dependent plasticity by altering neuropeptide expression. Neuron. 105(1), 106–121.e10.","chicago":"Beets, Isabel, Gaotian Zhang, Lorenz A. Fenk, Changchun Chen, Geoffrey M. Nelson, Marie-Anne Félix, and Mario de Bono. “Natural Variation in a Dendritic Scaffold Protein Remodels Experience-Dependent Plasticity by Altering Neuropeptide Expression.” <i>Neuron</i>. Cell Press, 2020. <a href=\"https://doi.org/10.1016/j.neuron.2019.10.001\">https://doi.org/10.1016/j.neuron.2019.10.001</a>.","short":"I. Beets, G. Zhang, L.A. Fenk, C. Chen, G.M. Nelson, M.-A. Félix, M. de Bono, Neuron 105 (2020) 106–121.e10.","ieee":"I. Beets <i>et al.</i>, “Natural variation in a dendritic scaffold protein remodels experience-dependent plasticity by altering neuropeptide expression,” <i>Neuron</i>, vol. 105, no. 1. Cell Press, p. 106–121.e10, 2020.","mla":"Beets, Isabel, et al. “Natural Variation in a Dendritic Scaffold Protein Remodels Experience-Dependent Plasticity by Altering Neuropeptide Expression.” <i>Neuron</i>, vol. 105, no. 1, Cell Press, 2020, p. 106–121.e10, doi:<a href=\"https://doi.org/10.1016/j.neuron.2019.10.001\">10.1016/j.neuron.2019.10.001</a>."},"article_processing_charge":"No","volume":105,"month":"01","publication_identifier":{"issn":["0896-6273"]},"publication":"Neuron","abstract":[{"lang":"eng","text":"The extent to which behavior is shaped by experience varies between individuals. Genetic differences contribute to this variation, but the neural mechanisms are not understood. Here, we dissect natural variation in the behavioral flexibility of two Caenorhabditis elegans wild strains. In one strain, a memory of exposure to 21% O2 suppresses CO2-evoked locomotory arousal; in the other, CO2 evokes arousal regardless of previous O2 experience. We map that variation to a polymorphic dendritic scaffold protein, ARCP-1, expressed in sensory neurons. ARCP-1 binds the Ca2+-dependent phosphodiesterase PDE-1 and co-localizes PDE-1 with molecular sensors for CO2 at dendritic ends. Reducing ARCP-1 or PDE-1 activity promotes CO2 escape by altering neuropeptide expression in the BAG CO2 sensors. Variation in ARCP-1 alters behavioral plasticity in multiple paradigms. Our findings are reminiscent of genetic accommodation, an evolutionary process by which phenotypic flexibility in response to environmental variation is reset by genetic change."}],"intvolume":"       105","has_accepted_license":"1","corr_author":"1","publication_status":"published","title":"Natural variation in a dendritic scaffold protein remodels experience-dependent plasticity by altering neuropeptide expression","day":"08","quality_controlled":"1"},{"article_type":"original","type":"journal_article","publisher":"SIAM","year":"2020","issue":"4","status":"public","date_published":"2020-02-13T00:00:00Z","date_created":"2020-03-01T23:00:39Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_updated":"2025-07-10T11:54:44Z","external_id":{"arxiv":["1705.08735"],"isi":["000551393100007"]},"department":[{"_id":"HeEd"}],"_id":"7554","oa_version":"Preprint","doi":"10.1137/S0040585X97T989726","publication_identifier":{"eissn":["1095-7219"],"issn":["0040-585X"]},"volume":64,"month":"02","scopus_import":"1","page":"595-614","citation":{"short":"H. Edelsbrunner, A. Nikitenko, Theory of Probability and Its Applications 64 (2020) 595–614.","chicago":"Edelsbrunner, Herbert, and Anton Nikitenko. “Weighted Poisson–Delaunay Mosaics.” <i>Theory of Probability and Its Applications</i>. SIAM, 2020. <a href=\"https://doi.org/10.1137/S0040585X97T989726\">https://doi.org/10.1137/S0040585X97T989726</a>.","ista":"Edelsbrunner H, Nikitenko A. 2020. Weighted Poisson–Delaunay mosaics. Theory of Probability and its Applications. 64(4), 595–614.","ama":"Edelsbrunner H, Nikitenko A. Weighted Poisson–Delaunay mosaics. <i>Theory of Probability and its Applications</i>. 2020;64(4):595-614. doi:<a href=\"https://doi.org/10.1137/S0040585X97T989726\">10.1137/S0040585X97T989726</a>","apa":"Edelsbrunner, H., &#38; Nikitenko, A. (2020). Weighted Poisson–Delaunay mosaics. <i>Theory of Probability and Its Applications</i>. SIAM. <a href=\"https://doi.org/10.1137/S0040585X97T989726\">https://doi.org/10.1137/S0040585X97T989726</a>","ieee":"H. Edelsbrunner and A. Nikitenko, “Weighted Poisson–Delaunay mosaics,” <i>Theory of Probability and its Applications</i>, vol. 64, no. 4. SIAM, pp. 595–614, 2020.","mla":"Edelsbrunner, Herbert, and Anton Nikitenko. “Weighted Poisson–Delaunay Mosaics.” <i>Theory of Probability and Its Applications</i>, vol. 64, no. 4, SIAM, 2020, pp. 595–614, doi:<a href=\"https://doi.org/10.1137/S0040585X97T989726\">10.1137/S0040585X97T989726</a>."},"isi":1,"article_processing_charge":"No","author":[{"first_name":"Herbert","id":"3FB178DA-F248-11E8-B48F-1D18A9856A87","last_name":"Edelsbrunner","full_name":"Edelsbrunner, Herbert","orcid":"0000-0002-9823-6833"},{"last_name":"Nikitenko","id":"3E4FF1BA-F248-11E8-B48F-1D18A9856A87","first_name":"Anton","orcid":"0000-0002-0659-3201","full_name":"Nikitenko, Anton"}],"language":[{"iso":"eng"}],"project":[{"_id":"266A2E9E-B435-11E9-9278-68D0E5697425","call_identifier":"H2020","name":"Alpha Shape Theory Extended","grant_number":"788183"},{"grant_number":"I02979-N35","name":"Persistence and stability of geometric complexes","call_identifier":"FWF","_id":"2561EBF4-B435-11E9-9278-68D0E5697425"}],"arxiv":1,"oa":1,"quality_controlled":"1","day":"13","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1705.08735"}],"title":"Weighted Poisson–Delaunay mosaics","publication_status":"published","publication":"Theory of Probability and its Applications","intvolume":"        64","abstract":[{"lang":"eng","text":"Slicing a Voronoi tessellation in ${R}^n$ with a $k$-plane gives a $k$-dimensional weighted Voronoi tessellation, also known as a power diagram or Laguerre tessellation. Mapping every simplex of the dual weighted Delaunay mosaic to the radius of the smallest empty circumscribed sphere whose center lies in the $k$-plane gives a generalized discrete Morse function. Assuming the Voronoi tessellation is generated by a Poisson point process in ${R}^n$, we study the expected number of simplices in the $k$-dimensional weighted Delaunay mosaic as well as the expected number of intervals of the Morse function, both as functions of a radius threshold. As a by-product, we obtain a new proof for the expected number of connected components (clumps) in a line section of a circular Boolean model in ${R}^n$."}],"ec_funded":1},{"status":"public","date_published":"2020-05-20T00:00:00Z","article_processing_charge":"No","citation":{"chicago":"Gupta, Chitrak, Umesh Khaniya, Chun Kit Chan, Francois Dehez, Mrinal Shekhar, M.R. Gunner, Leonid A Sazanov, Christophe Chipot, and Abhishek Singharoy. “Movies.” American Chemical Society, 2020. <a href=\"https://doi.org/10.1021/jacs.9b13450.s002\">https://doi.org/10.1021/jacs.9b13450.s002</a>.","ista":"Gupta C, Khaniya U, Chan CK, Dehez F, Shekhar M, Gunner MR, Sazanov LA, Chipot C, Singharoy A. 2020. Movies, American Chemical Society, <a href=\"https://doi.org/10.1021/jacs.9b13450.s002\">10.1021/jacs.9b13450.s002</a>.","ama":"Gupta C, Khaniya U, Chan CK, et al. Movies. 2020. doi:<a href=\"https://doi.org/10.1021/jacs.9b13450.s002\">10.1021/jacs.9b13450.s002</a>","apa":"Gupta, C., Khaniya, U., Chan, C. K., Dehez, F., Shekhar, M., Gunner, M. R., … Singharoy, A. (2020). Movies. American Chemical Society. <a href=\"https://doi.org/10.1021/jacs.9b13450.s002\">https://doi.org/10.1021/jacs.9b13450.s002</a>","short":"C. Gupta, U. Khaniya, C.K. Chan, F. Dehez, M. Shekhar, M.R. Gunner, L.A. Sazanov, C. Chipot, A. Singharoy, (2020).","ieee":"C. Gupta <i>et al.</i>, “Movies.” American Chemical Society, 2020.","mla":"Gupta, Chitrak, et al. <i>Movies</i>. American Chemical Society, 2020, doi:<a href=\"https://doi.org/10.1021/jacs.9b13450.s002\">10.1021/jacs.9b13450.s002</a>."},"author":[{"last_name":"Gupta","first_name":"Chitrak","full_name":"Gupta, Chitrak"},{"last_name":"Khaniya","first_name":"Umesh","full_name":"Khaniya, Umesh"},{"full_name":"Chan, Chun Kit","first_name":"Chun Kit","last_name":"Chan"},{"last_name":"Dehez","first_name":"Francois","full_name":"Dehez, Francois"},{"first_name":"Mrinal","last_name":"Shekhar","full_name":"Shekhar, Mrinal"},{"first_name":"M.R.","last_name":"Gunner","full_name":"Gunner, M.R."},{"full_name":"Sazanov, Leonid A","orcid":"0000-0002-0977-7989","first_name":"Leonid A","id":"338D39FE-F248-11E8-B48F-1D18A9856A87","last_name":"Sazanov"},{"full_name":"Chipot, Christophe","last_name":"Chipot","first_name":"Christophe"},{"last_name":"Singharoy","first_name":"Abhishek","full_name":"Singharoy, Abhishek"}],"date_created":"2021-08-11T09:18:54Z","user_id":"6785fbc1-c503-11eb-8a32-93094b40e1cf","type":"research_data_reference","publisher":"American Chemical Society","year":"2020","month":"05","title":"Movies","_id":"9878","oa_version":"Published Version","doi":"10.1021/jacs.9b13450.s002","related_material":{"record":[{"status":"public","id":"8040","relation":"used_in_publication"}]},"date_updated":"2025-07-10T11:55:01Z","day":"20","department":[{"_id":"LeSa"}]},{"doi":"10.1002/adma.202070122","oa_version":"Published Version","article_number":"2070122","_id":"17444","department":[{"_id":"GeKa"}],"date_updated":"2026-06-18T17:54:47Z","related_material":{"record":[{"id":"7541","relation":"other","status":"public"}]},"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2024-08-20T08:22:42Z","status":"public","date_published":"2020-04-23T00:00:00Z","ddc":["530"],"issue":"16","year":"2020","type":"other_academic_publication","publisher":"Wiley","publication":"Advanced Materials","abstract":[{"text":"The first wafer-scale growth of site-controlled Ge/Si nanowires is reported by Georgios Katsaros, Jian-Jun Zhang, and co-workers in article number 1906523. They are highly uniform and their position, distance, length, and even square- or L-shaped structures can all be precisely controlled. The electrically tunable spin-orbit coupling demonstrated by transport measurements and the charge sensing between quantum dots in closely spaced wires open a path toward scalable qubit devices using nanowires on silicon.","lang":"eng"}],"intvolume":"        32","publication_status":"published","title":"Nanowires: Site‐controlled uniform Ge/Si Hut wires with electrically tunable spin–orbit coupling (Adv. Mater. 16/2020)","main_file_link":[{"open_access":"1","url":"https://doi.org/10.1002/adma.202070122"}],"day":"23","quality_controlled":"1","oa":1,"author":[{"full_name":"Gao, Fei","last_name":"Gao","first_name":"Fei"},{"full_name":"Wang, Jian‐Huan","last_name":"Wang","first_name":"Jian‐Huan"},{"full_name":"Watzinger, Hannes","id":"35DF8E50-F248-11E8-B48F-1D18A9856A87","first_name":"Hannes","last_name":"Watzinger"},{"full_name":"Hu, Hao","last_name":"Hu","first_name":"Hao"},{"full_name":"Rančić, Marko J.","first_name":"Marko J.","last_name":"Rančić"},{"full_name":"Zhang, Jie‐Yin","first_name":"Jie‐Yin","last_name":"Zhang"},{"full_name":"Wang, Ting","first_name":"Ting","last_name":"Wang"},{"full_name":"Yao, Yuan","first_name":"Yuan","last_name":"Yao"},{"full_name":"Wang, Gui‐Lei","first_name":"Gui‐Lei","last_name":"Wang"},{"first_name":"Josip","id":"3F5D8856-F248-11E8-B48F-1D18A9856A87","last_name":"Kukucka","full_name":"Kukucka, Josip"},{"last_name":"Vukušić","first_name":"Lada","id":"31E9F056-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0003-2424-8636","full_name":"Vukušić, Lada"},{"first_name":"Christoph","last_name":"Kloeffel","full_name":"Kloeffel, Christoph"},{"full_name":"Loss, Daniel","first_name":"Daniel","last_name":"Loss"},{"full_name":"Liu, Feng","last_name":"Liu","first_name":"Feng"},{"id":"38DB5788-F248-11E8-B48F-1D18A9856A87","first_name":"Georgios","last_name":"Katsaros","full_name":"Katsaros, Georgios","orcid":"0000-0001-8342-202X"},{"first_name":"Jian‐Jun","last_name":"Zhang","full_name":"Zhang, Jian‐Jun"}],"language":[{"iso":"eng"}],"article_processing_charge":"No","citation":{"short":"F. Gao, J. Wang, H. Watzinger, H. Hu, M.J. Rančić, J. Zhang, T. Wang, Y. Yao, G. Wang, J. Kukucka, L. Vukušić, C. Kloeffel, D. Loss, F. Liu, G. Katsaros, J. Zhang, Nanowires: Site‐controlled Uniform Ge/Si Hut Wires with Electrically Tunable Spin–Orbit Coupling (Adv. Mater. 16/2020), Wiley, 2020.","ama":"Gao F, Wang J, Watzinger H, et al. <i>Nanowires: Site‐controlled Uniform Ge/Si Hut Wires with Electrically Tunable Spin–Orbit Coupling (Adv. Mater. 16/2020)</i>. Vol 32. Wiley; 2020. doi:<a href=\"https://doi.org/10.1002/adma.202070122\">10.1002/adma.202070122</a>","apa":"Gao, F., Wang, J., Watzinger, H., Hu, H., Rančić, M. J., Zhang, J., … Zhang, J. (2020). <i>Nanowires: Site‐controlled uniform Ge/Si Hut wires with electrically tunable spin–orbit coupling (Adv. Mater. 16/2020)</i>. <i>Advanced Materials</i> (Vol. 32). Wiley. <a href=\"https://doi.org/10.1002/adma.202070122\">https://doi.org/10.1002/adma.202070122</a>","chicago":"Gao, Fei, Jian‐Huan Wang, Hannes Watzinger, Hao Hu, Marko J. Rančić, Jie‐Yin Zhang, Ting Wang, et al. <i>Nanowires: Site‐controlled Uniform Ge/Si Hut Wires with Electrically Tunable Spin–Orbit Coupling (Adv. Mater. 16/2020)</i>. <i>Advanced Materials</i>. Vol. 32. Wiley, 2020. <a href=\"https://doi.org/10.1002/adma.202070122\">https://doi.org/10.1002/adma.202070122</a>.","ista":"Gao F, Wang J, Watzinger H, Hu H, Rančić MJ, Zhang J, Wang T, Yao Y, Wang G, Kukucka J, Vukušić L, Kloeffel C, Loss D, Liu F, Katsaros G, Zhang J. 2020. Nanowires: Site‐controlled uniform Ge/Si Hut wires with electrically tunable spin–orbit coupling (Adv. Mater. 16/2020), Wiley,p.","ieee":"F. Gao <i>et al.</i>, <i>Nanowires: Site‐controlled uniform Ge/Si Hut wires with electrically tunable spin–orbit coupling (Adv. Mater. 16/2020)</i>, vol. 32, no. 16. Wiley, 2020.","mla":"Gao, Fei, et al. “Nanowires: Site‐controlled Uniform Ge/Si Hut Wires with Electrically Tunable Spin–Orbit Coupling (Adv. Mater. 16/2020).” <i>Advanced Materials</i>, vol. 32, no. 16, 2070122, Wiley, 2020, doi:<a href=\"https://doi.org/10.1002/adma.202070122\">10.1002/adma.202070122</a>."},"volume":32,"month":"04","publication_identifier":{"issn":["0935-9648"],"eissn":["1521-4095"]}},{"page":"3459-3527","status":"public","date_published":"2020-11-19T00:00:00Z","citation":{"mla":"Erdös, László, et al. “Random Matrices.” <i>Oberwolfach Reports</i>, vol. 16, no. 4, EMS Press, 2020, pp. 3459–527, doi:<a href=\"https://doi.org/10.4171/owr/2019/56\">10.4171/owr/2019/56</a>.","ieee":"L. Erdös, F. Götze, and A. Guionnet, “Random matrices,” <i>Oberwolfach Reports</i>, vol. 16, no. 4. EMS Press, pp. 3459–3527, 2020.","short":"L. Erdös, F. Götze, A. Guionnet, Oberwolfach Reports 16 (2020) 3459–3527.","ista":"Erdös L, Götze F, Guionnet A. 2020. Random matrices. Oberwolfach Reports. 16(4), 3459–3527.","chicago":"Erdös, László, Friedrich Götze, and Alice Guionnet. “Random Matrices.” <i>Oberwolfach Reports</i>. EMS Press, 2020. <a href=\"https://doi.org/10.4171/owr/2019/56\">https://doi.org/10.4171/owr/2019/56</a>.","ama":"Erdös L, Götze F, Guionnet A. Random matrices. <i>Oberwolfach Reports</i>. 2020;16(4):3459-3527. doi:<a href=\"https://doi.org/10.4171/owr/2019/56\">10.4171/owr/2019/56</a>","apa":"Erdös, L., Götze, F., &#38; Guionnet, A. (2020). Random matrices. <i>Oberwolfach Reports</i>. EMS Press. <a href=\"https://doi.org/10.4171/owr/2019/56\">https://doi.org/10.4171/owr/2019/56</a>"},"article_processing_charge":"No","author":[{"orcid":"0000-0001-5366-9603","full_name":"Erdös, László","last_name":"Erdös","first_name":"László","id":"4DBD5372-F248-11E8-B48F-1D18A9856A87"},{"last_name":"Götze","first_name":"Friedrich","full_name":"Götze, Friedrich"},{"full_name":"Guionnet, Alice","last_name":"Guionnet","first_name":"Alice"}],"language":[{"iso":"eng"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2024-03-05T07:54:44Z","article_type":"original","publication_identifier":{"issn":["1660-8933"]},"type":"journal_article","publisher":"EMS Press","year":"2020","volume":16,"month":"11","issue":"4","das_tickbox":"1","title":"Random matrices","_id":"15079","publication_status":"published","publication":"Oberwolfach Reports","abstract":[{"text":"Large complex systems tend to develop universal patterns that often represent their essential characteristics. For example, the cumulative effects of independent or weakly dependent random variables often yield the Gaussian universality class via the central limit theorem. For non-commutative random variables, e.g. matrices, the Gaussian behavior is often replaced by another universality class, commonly called random matrix statistics. Nearby eigenvalues are strongly correlated, and, remarkably, their correlation structure is universal, depending only on the symmetry type of the matrix. Even more surprisingly, this feature is not restricted to matrices; in fact Eugene Wigner, the pioneer of the field, discovered in the 1950s that distributions of the gaps between energy levels of complicated quantum systems universally follow the same random matrix statistics. This claim has never been rigorously proved for any realistic physical system but experimental data and extensive numerics leave no doubt as to its correctness. Since then random matrices have proved to be extremely useful phenomenological models in a wide range of applications beyond quantum physics that include number theory, statistics, neuroscience, population dynamics, wireless communication and mathematical finance. The ubiquity of random matrices in natural sciences is still a mystery, but recent years have witnessed a breakthrough in the mathematical description of the statistical structure of their spectrum. Random matrices and closely related areas such as log-gases have become an extremely active research area in probability theory.\r\nThis workshop brought together outstanding researchers from a variety of mathematical backgrounds whose areas of research are linked to random matrices. While there are strong links between their motivations, the techniques used by these researchers span a large swath of mathematics, ranging from purely algebraic techniques to stochastic analysis, classical probability theory, operator algebra, supersymmetry, orthogonal polynomials, etc.","lang":"eng"}],"intvolume":"        16","oa_version":"None","doi":"10.4171/owr/2019/56","quality_controlled":"1","date_updated":"2026-07-06T11:53:24Z","day":"19","department":[{"_id":"LaEr"}]},{"volume":22,"month":"07","scopus_import":"1","publication_identifier":{"issn":["1435-9855"]},"oa":1,"arxiv":1,"author":[{"last_name":"Boccato","first_name":"Chiara","id":"342E7E22-F248-11E8-B48F-1D18A9856A87","full_name":"Boccato, Chiara"},{"full_name":"Brennecke, Christian","first_name":"Christian","last_name":"Brennecke"},{"full_name":"Cenatiempo, Serena","last_name":"Cenatiempo","first_name":"Serena"},{"full_name":"Schlein, Benjamin","last_name":"Schlein","first_name":"Benjamin"}],"language":[{"iso":"eng"}],"page":"2331-2403","article_processing_charge":"No","isi":1,"citation":{"mla":"Boccato, Chiara, et al. “The Excitation Spectrum of Bose Gases Interacting through Singular Potentials.” <i>Journal of the European Mathematical Society</i>, vol. 22, no. 7, EMS Press, 2020, pp. 2331–403, doi:<a href=\"https://doi.org/10.4171/JEMS/966\">10.4171/JEMS/966</a>.","ieee":"C. Boccato, C. Brennecke, S. Cenatiempo, and B. Schlein, “The excitation spectrum of Bose gases interacting through singular potentials,” <i>Journal of the European Mathematical Society</i>, vol. 22, no. 7. EMS Press, pp. 2331–2403, 2020.","apa":"Boccato, C., Brennecke, C., Cenatiempo, S., &#38; Schlein, B. (2020). The excitation spectrum of Bose gases interacting through singular potentials. <i>Journal of the European Mathematical Society</i>. EMS Press. <a href=\"https://doi.org/10.4171/JEMS/966\">https://doi.org/10.4171/JEMS/966</a>","ama":"Boccato C, Brennecke C, Cenatiempo S, Schlein B. The excitation spectrum of Bose gases interacting through singular potentials. <i>Journal of the European Mathematical Society</i>. 2020;22(7):2331-2403. doi:<a href=\"https://doi.org/10.4171/JEMS/966\">10.4171/JEMS/966</a>","ista":"Boccato C, Brennecke C, Cenatiempo S, Schlein B. 2020. The excitation spectrum of Bose gases interacting through singular potentials. Journal of the European Mathematical Society. 22(7), 2331–2403.","chicago":"Boccato, Chiara, Christian Brennecke, Serena Cenatiempo, and Benjamin Schlein. “The Excitation Spectrum of Bose Gases Interacting through Singular Potentials.” <i>Journal of the European Mathematical Society</i>. EMS Press, 2020. <a href=\"https://doi.org/10.4171/JEMS/966\">https://doi.org/10.4171/JEMS/966</a>.","short":"C. Boccato, C. Brennecke, S. Cenatiempo, B. Schlein, Journal of the European Mathematical Society 22 (2020) 2331–2403."},"main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1704.04819"}],"day":"01","quality_controlled":"1","publication":"Journal of the European Mathematical Society","intvolume":"        22","abstract":[{"lang":"eng","text":"We consider systems of N bosons in a box of volume one, interacting through a repulsive two-body potential of the form κN3β−1V(Nβx). For all 0<β<1, and for sufficiently small coupling constant κ>0, we establish the validity of Bogolyubov theory, identifying the ground state energy and the low-lying excitation spectrum up to errors that vanish in the limit of large N."}],"title":"The excitation spectrum of Bose gases interacting through singular potentials","publication_status":"published","issue":"7","year":"2020","article_type":"original","type":"journal_article","publisher":"EMS Press","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-06-29T07:59:35Z","status":"public","date_published":"2020-07-01T00:00:00Z","department":[{"_id":"RoSe"}],"external_id":{"isi":["000548174700006"],"arxiv":["1704.04819"]},"date_updated":"2026-07-06T11:53:41Z","doi":"10.4171/JEMS/966","oa_version":"Preprint","das_tickbox":"1","_id":"8042"},{"department":[{"_id":"TiBr"}],"external_id":{"arxiv":["1906.08463"],"isi":["000596833300001"]},"date_updated":"2026-07-06T11:54:01Z","doi":"10.4171/CMH/499","oa_version":"Preprint","_id":"9007","das_tickbox":"1","issue":"4","year":"2020","publisher":"EMS Press","article_type":"original","type":"journal_article","date_created":"2021-01-17T23:01:11Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_published":"2020-12-07T00:00:00Z","status":"public","main_file_link":[{"open_access":"1","url":"https://arxiv.org/abs/1906.08463"}],"day":"07","quality_controlled":"1","abstract":[{"lang":"eng","text":"Motivated by a recent question of Peyre, we apply the Hardy–Littlewood circle method to count “sufficiently free” rational points of bounded height on arbitrary smooth projective hypersurfaces of low degree that are defined over the rationals."}],"intvolume":"        95","publication":"Commentarii Mathematici Helvetici","title":"Free rational points on smooth hypersurfaces","publication_status":"published","month":"12","scopus_import":"1","volume":95,"publication_identifier":{"eissn":["1420-8946"],"issn":["0010-2571"]},"oa":1,"arxiv":1,"language":[{"iso":"eng"}],"author":[{"full_name":"Browning, Timothy D","orcid":"0000-0002-8314-0177","id":"35827D50-F248-11E8-B48F-1D18A9856A87","first_name":"Timothy D","last_name":"Browning"},{"full_name":"Sawin, Will","last_name":"Sawin","first_name":"Will"}],"citation":{"short":"T.D. Browning, W. Sawin, Commentarii Mathematici Helvetici 95 (2020) 635–659.","ista":"Browning TD, Sawin W. 2020. Free rational points on smooth hypersurfaces. Commentarii Mathematici Helvetici. 95(4), 635–659.","chicago":"Browning, Timothy D, and Will Sawin. “Free Rational Points on Smooth Hypersurfaces.” <i>Commentarii Mathematici Helvetici</i>. EMS Press, 2020. <a href=\"https://doi.org/10.4171/CMH/499\">https://doi.org/10.4171/CMH/499</a>.","apa":"Browning, T. D., &#38; Sawin, W. (2020). Free rational points on smooth hypersurfaces. <i>Commentarii Mathematici Helvetici</i>. EMS Press. <a href=\"https://doi.org/10.4171/CMH/499\">https://doi.org/10.4171/CMH/499</a>","ama":"Browning TD, Sawin W. Free rational points on smooth hypersurfaces. <i>Commentarii Mathematici Helvetici</i>. 2020;95(4):635-659. doi:<a href=\"https://doi.org/10.4171/CMH/499\">10.4171/CMH/499</a>","ieee":"T. D. Browning and W. Sawin, “Free rational points on smooth hypersurfaces,” <i>Commentarii Mathematici Helvetici</i>, vol. 95, no. 4. EMS Press, pp. 635–659, 2020.","mla":"Browning, Timothy D., and Will Sawin. “Free Rational Points on Smooth Hypersurfaces.” <i>Commentarii Mathematici Helvetici</i>, vol. 95, no. 4, EMS Press, 2020, pp. 635–59, doi:<a href=\"https://doi.org/10.4171/CMH/499\">10.4171/CMH/499</a>."},"isi":1,"article_processing_charge":"No","page":"635-659"},{"quality_controlled":"1","day":"04","publication_status":"published","title":"Geometry and physics of Higgs bundles","abstract":[{"text":"This workshop focused on interactions between the various perspectives on the moduli space of Higgs bundles over a Riemann surface. This subject draws on algebraic geometry, geometric topology, geometric analysis and mathematical physics, and the goal was to promote interactions between these various branches of the subject. The main current directions of research were well represented by the participants, and the talks included many from both senior and junior participants.","lang":"eng"}],"intvolume":"        16","publication":"Oberwolfach Reports","publication_identifier":{"issn":["1660-8933"]},"month":"06","volume":16,"citation":{"ieee":"L. Anderson, T. Hausel, R. Mazzeo, and L. Schaposnik, “Geometry and physics of Higgs bundles,” <i>Oberwolfach Reports</i>, vol. 16, no. 2. EMS Press, pp. 1357–1417, 2020.","mla":"Anderson, Lara, et al. “Geometry and Physics of Higgs Bundles.” <i>Oberwolfach Reports</i>, vol. 16, no. 2, EMS Press, 2020, pp. 1357–417, doi:<a href=\"https://doi.org/10.4171/owr/2019/23\">10.4171/owr/2019/23</a>.","short":"L. Anderson, T. Hausel, R. Mazzeo, L. Schaposnik, Oberwolfach Reports 16 (2020) 1357–1417.","ista":"Anderson L, Hausel T, Mazzeo R, Schaposnik L. 2020. Geometry and physics of Higgs bundles. Oberwolfach Reports. 16(2), 1357–1417.","chicago":"Anderson, Lara, Tamás Hausel, Rafe Mazzeo, and Laura Schaposnik. “Geometry and Physics of Higgs Bundles.” <i>Oberwolfach Reports</i>. EMS Press, 2020. <a href=\"https://doi.org/10.4171/owr/2019/23\">https://doi.org/10.4171/owr/2019/23</a>.","ama":"Anderson L, Hausel T, Mazzeo R, Schaposnik L. Geometry and physics of Higgs bundles. <i>Oberwolfach Reports</i>. 2020;16(2):1357-1417. doi:<a href=\"https://doi.org/10.4171/owr/2019/23\">10.4171/owr/2019/23</a>","apa":"Anderson, L., Hausel, T., Mazzeo, R., &#38; Schaposnik, L. (2020). Geometry and physics of Higgs bundles. <i>Oberwolfach Reports</i>. EMS Press. <a href=\"https://doi.org/10.4171/owr/2019/23\">https://doi.org/10.4171/owr/2019/23</a>"},"article_processing_charge":"No","page":"1357-1417","language":[{"iso":"eng"}],"author":[{"first_name":"Lara","last_name":"Anderson","full_name":"Anderson, Lara"},{"last_name":"Hausel","first_name":"Tamás","id":"4A0666D8-F248-11E8-B48F-1D18A9856A87","orcid":"0000-0002-9582-2634","full_name":"Hausel, Tamás"},{"last_name":"Mazzeo","first_name":"Rafe","full_name":"Mazzeo, Rafe"},{"full_name":"Schaposnik, Laura","last_name":"Schaposnik","first_name":"Laura"}],"date_updated":"2026-07-06T11:52:54Z","department":[{"_id":"TaHa"}],"_id":"15070","das_tickbox":"1","oa_version":"None","doi":"10.4171/owr/2019/23","publisher":"EMS Press","article_type":"original","type":"journal_article","year":"2020","issue":"2","date_published":"2020-06-04T00:00:00Z","status":"public","keyword":["Organic Chemistry","Biochemistry"],"date_created":"2024-03-04T11:36:31Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87"},{"citation":{"mla":"Hainzl, Christian, et al. “Many-Body Quantum Systems.” <i>Oberwolfach Reports</i>, vol. 16, no. 3, EMS Press, 2020, pp. 2541–603, doi:<a href=\"https://doi.org/10.4171/owr/2019/41\">10.4171/owr/2019/41</a>.","ieee":"C. Hainzl, B. Schlein, R. Seiringer, and S. Warzel, “Many-body quantum systems,” <i>Oberwolfach Reports</i>, vol. 16, no. 3. EMS Press, pp. 2541–2603, 2020.","ista":"Hainzl C, Schlein B, Seiringer R, Warzel S. 2020. Many-body quantum systems. Oberwolfach Reports. 16(3), 2541–2603.","chicago":"Hainzl, Christian, Benjamin Schlein, Robert Seiringer, and Simone Warzel. “Many-Body Quantum Systems.” <i>Oberwolfach Reports</i>. EMS Press, 2020. <a href=\"https://doi.org/10.4171/owr/2019/41\">https://doi.org/10.4171/owr/2019/41</a>.","ama":"Hainzl C, Schlein B, Seiringer R, Warzel S. Many-body quantum systems. <i>Oberwolfach Reports</i>. 2020;16(3):2541-2603. doi:<a href=\"https://doi.org/10.4171/owr/2019/41\">10.4171/owr/2019/41</a>","apa":"Hainzl, C., Schlein, B., Seiringer, R., &#38; Warzel, S. (2020). Many-body quantum systems. <i>Oberwolfach Reports</i>. EMS Press. <a href=\"https://doi.org/10.4171/owr/2019/41\">https://doi.org/10.4171/owr/2019/41</a>","short":"C. Hainzl, B. Schlein, R. Seiringer, S. Warzel, Oberwolfach Reports 16 (2020) 2541–2603."},"date_published":"2020-09-10T00:00:00Z","article_processing_charge":"No","status":"public","page":"2541-2603","language":[{"iso":"eng"}],"author":[{"last_name":"Hainzl","first_name":"Christian","full_name":"Hainzl, Christian"},{"last_name":"Schlein","first_name":"Benjamin","full_name":"Schlein, Benjamin"},{"first_name":"Robert","id":"4AFD0470-F248-11E8-B48F-1D18A9856A87","last_name":"Seiringer","full_name":"Seiringer, Robert","orcid":"0000-0002-6781-0521"},{"first_name":"Simone","last_name":"Warzel","full_name":"Warzel, Simone"}],"user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2024-03-04T11:46:12Z","publisher":"EMS Press","publication_identifier":{"issn":["1660-8933"]},"type":"journal_article","article_type":"original","month":"09","volume":16,"year":"2020","issue":"3","_id":"15072","publication_status":"published","title":"Many-body quantum systems","das_tickbox":"1","oa_version":"None","abstract":[{"lang":"eng","text":"The interaction among fundamental particles in nature leads to many interesting effects in quantum statistical mechanics; examples include superconductivity for charged systems and superfluidity in cold gases. It is a huge challenge for mathematical physics to understand the collective behavior of systems containing a large number of particles, emerging from known microscopic interactions. In this workshop we brought together researchers working on different aspects of many-body quantum mechanics to discuss recent developments, exchange ideas and propose new challenges and research directions."}],"intvolume":"        16","publication":"Oberwolfach Reports","doi":"10.4171/owr/2019/41","quality_controlled":"1","date_updated":"2026-07-06T11:53:09Z","day":"10","department":[{"_id":"RoSe"}]},{"ddc":["510"],"year":"2020","type":"journal_article","article_type":"original","publisher":"Institute of Mathematical Statistics","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-12-27T23:01:17Z","status":"public","date_published":"2020-10-21T00:00:00Z","department":[{"_id":"JaMa"}],"external_id":{"isi":["000591737500001"],"arxiv":["1811.01366"]},"date_updated":"2026-07-06T12:04:40Z","doi":"10.1214/20-EJP536","file_date_updated":"2020-12-28T08:24:08Z","oa_version":"Published Version","das_tickbox":"1","file":[{"checksum":"d75359b9814e78d57c0a481b7cde3751","date_updated":"2020-12-28T08:24:08Z","access_level":"open_access","creator":"dernst","file_id":"8976","file_name":"2020_ElectronJProbab_Redig.pdf","file_size":696653,"relation":"main_file","success":1,"content_type":"application/pdf","date_created":"2020-12-28T08:24:08Z"}],"_id":"8973","article_number":"138","volume":25,"scopus_import":"1","month":"10","publication_identifier":{"eissn":["1083-6489"]},"oa":1,"arxiv":1,"acknowledgement":"We warmly thank S.R.S. Varadhan for many enlightening discussions at an early stage of this work. We are indebted to Francesca Collet for fruitful discussions and constant support all throughout this work. We thank Simone Floreani\r\nand Alberto Chiarini for helpful conversations on the final part of this paper as well as both referees for their careful reading and for raising relevant issues on some weak points contained in a previous version of this manuscript; we believe this helped us to improve it.\r\nPart of this work was done during the authors’ stay at the Institut Henri Poincaré (UMS 5208 CNRS-Sorbonne Université) – Centre Emile Borel during the trimester Stochastic Dynamics Out of Equilibrium. The authors thank this institution for hospitality and support (through LabEx CARMIN, ANR-10-LABX-59-01). F.S. thanks laboratoire\r\nMAP5 of Université de Paris, and E.S. thanks Delft University, for financial support and hospitality. F.S. acknowledges NWO for financial support via the TOP1 grant 613.001.552 as well as funding from the European Union’s Horizon 2020 research and innovation programme under the Marie-Skłodowska-Curie grant agreement No. 754411. This research has been conducted within the FP2M federation (CNRS FR 2036).","author":[{"first_name":"Frank","last_name":"Redig","full_name":"Redig, Frank"},{"first_name":"Ellen","last_name":"Saada","full_name":"Saada, Ellen"},{"last_name":"Sau","first_name":"Federico","id":"E1836206-9F16-11E9-8814-AEFDE5697425","full_name":"Sau, Federico"}],"language":[{"iso":"eng"}],"project":[{"call_identifier":"H2020","name":"ISTplus - Postdoctoral Fellowships","_id":"260C2330-B435-11E9-9278-68D0E5697425","grant_number":"754411"}],"citation":{"short":"F. Redig, E. Saada, F. Sau, Electronic Journal of Probability 25 (2020).","chicago":"Redig, Frank, Ellen Saada, and Federico Sau. “Symmetric Simple Exclusion Process in Dynamic Environment: Hydrodynamics.” <i>Electronic Journal of Probability</i>. Institute of Mathematical Statistics, 2020. <a href=\"https://doi.org/10.1214/20-EJP536\">https://doi.org/10.1214/20-EJP536</a>.","ista":"Redig F, Saada E, Sau F. 2020. Symmetric simple exclusion process in dynamic environment: Hydrodynamics. Electronic Journal of Probability. 25, 138.","apa":"Redig, F., Saada, E., &#38; Sau, F. (2020). Symmetric simple exclusion process in dynamic environment: Hydrodynamics. <i>Electronic Journal of Probability</i>. Institute of Mathematical Statistics. <a href=\"https://doi.org/10.1214/20-EJP536\">https://doi.org/10.1214/20-EJP536</a>","ama":"Redig F, Saada E, Sau F. Symmetric simple exclusion process in dynamic environment: Hydrodynamics. <i>Electronic Journal of Probability</i>. 2020;25. doi:<a href=\"https://doi.org/10.1214/20-EJP536\">10.1214/20-EJP536</a>","mla":"Redig, Frank, et al. “Symmetric Simple Exclusion Process in Dynamic Environment: Hydrodynamics.” <i>Electronic Journal of Probability</i>, vol. 25, 138, Institute of Mathematical Statistics, 2020, doi:<a href=\"https://doi.org/10.1214/20-EJP536\">10.1214/20-EJP536</a>.","ieee":"F. Redig, E. Saada, and F. Sau, “Symmetric simple exclusion process in dynamic environment: Hydrodynamics,” <i>Electronic Journal of Probability</i>, vol. 25. Institute of Mathematical Statistics, 2020."},"article_processing_charge":"No","isi":1,"day":"21","quality_controlled":"1","ec_funded":1,"publication":"Electronic Journal of Probability","abstract":[{"lang":"eng","text":"We consider the symmetric simple exclusion process in Zd with quenched bounded dynamic random conductances and prove its hydrodynamic limit in path space. The main tool is the connection, due to the self-duality of the process, between the invariance principle for single particles starting from all points and the macroscopic behavior of the density field. While the hydrodynamic limit at fixed macroscopic times is obtained via a generalization to the time-inhomogeneous context of the strategy introduced in [41], in order to prove tightness for the sequence of empirical density fields we develop a new criterion based on the notion of uniform conditional stochastic continuity, following [50]. In conclusion, we show that uniform elliptic dynamic conductances provide an example of environments in which the so-called arbitrary starting point invariance principle may be derived from the invariance principle of a single particle starting from the origin. Therefore, our hydrodynamics result applies to the examples of quenched environments considered in, e.g., [1], [3], [6] in combination with the hypothesis of uniform ellipticity."}],"intvolume":"        25","has_accepted_license":"1","title":"Symmetric simple exclusion process in dynamic environment: Hydrodynamics","publication_status":"published"},{"page":"9220-9230","isi":1,"citation":{"mla":"Gupta, Chitrak, et al. “Charge Transfer and Chemo-Mechanical Coupling in Respiratory Complex I.” <i>Journal of the American Chemical Society</i>, vol. 142, no. 20, American Chemical Society, 2020, pp. 9220–30, doi:<a href=\"https://doi.org/10.1021/jacs.9b13450\">10.1021/jacs.9b13450</a>.","ieee":"C. Gupta <i>et al.</i>, “Charge transfer and chemo-mechanical coupling in respiratory complex I,” <i>Journal of the American Chemical Society</i>, vol. 142, no. 20. American Chemical Society, pp. 9220–9230, 2020.","apa":"Gupta, C., Khaniya, U., Chan, C. K., Dehez, F., Shekhar, M., Gunner, M. R., … Singharoy, A. (2020). Charge transfer and chemo-mechanical coupling in respiratory complex I. <i>Journal of the American Chemical Society</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/jacs.9b13450\">https://doi.org/10.1021/jacs.9b13450</a>","ama":"Gupta C, Khaniya U, Chan CK, et al. Charge transfer and chemo-mechanical coupling in respiratory complex I. <i>Journal of the American Chemical Society</i>. 2020;142(20):9220-9230. doi:<a href=\"https://doi.org/10.1021/jacs.9b13450\">10.1021/jacs.9b13450</a>","chicago":"Gupta, Chitrak, Umesh Khaniya, Chun Kit Chan, Francois Dehez, Mrinal Shekhar, M. R. Gunner, Leonid A Sazanov, Christophe Chipot, and Abhishek Singharoy. “Charge Transfer and Chemo-Mechanical Coupling in Respiratory Complex I.” <i>Journal of the American Chemical Society</i>. American Chemical Society, 2020. <a href=\"https://doi.org/10.1021/jacs.9b13450\">https://doi.org/10.1021/jacs.9b13450</a>.","ista":"Gupta C, Khaniya U, Chan CK, Dehez F, Shekhar M, Gunner MR, Sazanov LA, Chipot C, Singharoy A. 2020. Charge transfer and chemo-mechanical coupling in respiratory complex I. Journal of the American Chemical Society. 142(20), 9220–9230.","short":"C. Gupta, U. Khaniya, C.K. Chan, F. Dehez, M. Shekhar, M.R. Gunner, L.A. Sazanov, C. Chipot, A. Singharoy, Journal of the American Chemical Society 142 (2020) 9220–9230."},"article_processing_charge":"No","author":[{"full_name":"Gupta, Chitrak","first_name":"Chitrak","last_name":"Gupta"},{"full_name":"Khaniya, Umesh","first_name":"Umesh","last_name":"Khaniya"},{"first_name":"Chun Kit","last_name":"Chan","full_name":"Chan, Chun Kit"},{"full_name":"Dehez, Francois","last_name":"Dehez","first_name":"Francois"},{"first_name":"Mrinal","last_name":"Shekhar","full_name":"Shekhar, Mrinal"},{"first_name":"M. R.","last_name":"Gunner","full_name":"Gunner, M. R."},{"first_name":"Leonid A","id":"338D39FE-F248-11E8-B48F-1D18A9856A87","last_name":"Sazanov","full_name":"Sazanov, Leonid A","orcid":"0000-0002-0977-7989"},{"full_name":"Chipot, Christophe","last_name":"Chipot","first_name":"Christophe"},{"full_name":"Singharoy, Abhishek","first_name":"Abhishek","last_name":"Singharoy"}],"language":[{"iso":"eng"}],"publication_identifier":{"issn":["0002-7863"],"eissn":["1520-5126"]},"volume":142,"month":"05","scopus_import":"1","corr_author":"1","publication_status":"published","title":"Charge transfer and chemo-mechanical coupling in respiratory complex I","publication":"Journal of the American Chemical Society","intvolume":"       142","abstract":[{"text":"The mitochondrial respiratory chain, formed by five protein complexes, utilizes energy from catabolic processes to synthesize ATP. Complex I, the first and the largest protein complex of the chain, harvests electrons from NADH to reduce quinone, while pumping protons across the mitochondrial membrane. Detailed knowledge of the working principle of such coupled charge-transfer processes remains, however, fragmentary due to bottlenecks in understanding redox-driven conformational transitions and their interplay with the hydrated proton pathways. Complex I from Thermus thermophilus encases 16 subunits with nine iron–sulfur clusters, reduced by electrons from NADH. Here, employing the latest crystal structure of T. thermophilus complex I, we have used microsecond-scale molecular dynamics simulations to study the chemo-mechanical coupling between redox changes of the iron–sulfur clusters and conformational transitions across complex I. First, we identify the redox switches within complex I, which allosterically couple the dynamics of the quinone binding pocket to the site of NADH reduction. Second, our free-energy calculations reveal that the affinity of the quinone, specifically menaquinone, for the binding-site is higher than that of its reduced, menaquinol form—a design essential for menaquinol release. Remarkably, the barriers to diffusive menaquinone dynamics are lesser than that of the more ubiquitous ubiquinone, and the naphthoquinone headgroup of the former furnishes stronger binding interactions with the pocket, favoring menaquinone for charge transport in T. thermophilus. Our computations are consistent with experimentally validated mutations and hierarchize the key residues into three functional classes, identifying new mutation targets. Third, long-range hydrogen-bond networks connecting the quinone-binding site to the transmembrane subunits are found to be responsible for proton pumping. Put together, the simulations reveal the molecular design principles linking redox reactions to quinone turnover to proton translocation in complex I.","lang":"eng"}],"quality_controlled":"1","day":"20","status":"public","date_published":"2020-05-20T00:00:00Z","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2020-06-29T07:59:35Z","article_type":"original","type":"journal_article","publisher":"American Chemical Society","year":"2020","issue":"20","pmid":1,"_id":"8040","oa_version":"None","doi":"10.1021/jacs.9b13450","date_updated":"2026-07-06T12:16:34Z","related_material":{"record":[{"status":"public","relation":"research_data","id":"9878"},{"status":"public","id":"9326","relation":"research_data"},{"status":"public","relation":"research_data","id":"9713"}]},"external_id":{"pmid":["32347721"],"isi":["000537415600020"]},"department":[{"_id":"LeSa"}]},{"oa":1,"citation":{"apa":"Ucar, M. C., &#38; Lipowsky, R. (2020). Collective force generation by molecular motors is determined by strain-induced unbinding. <i>Nano Letters</i>. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.9b04445\">https://doi.org/10.1021/acs.nanolett.9b04445</a>","ama":"Ucar MC, Lipowsky R. Collective force generation by molecular motors is determined by strain-induced unbinding. <i>Nano Letters</i>. 2020;20(1):669-676. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.9b04445\">10.1021/acs.nanolett.9b04445</a>","ista":"Ucar MC, Lipowsky R. 2020. Collective force generation by molecular motors is determined by strain-induced unbinding. Nano Letters. 20(1), 669–676.","chicago":"Ucar, Mehmet C, and Reinhard Lipowsky. “Collective Force Generation by Molecular Motors Is Determined by Strain-Induced Unbinding.” <i>Nano Letters</i>. American Chemical Society, 2020. <a href=\"https://doi.org/10.1021/acs.nanolett.9b04445\">https://doi.org/10.1021/acs.nanolett.9b04445</a>.","short":"M.C. Ucar, R. Lipowsky, Nano Letters 20 (2020) 669–676.","ieee":"M. C. Ucar and R. Lipowsky, “Collective force generation by molecular motors is determined by strain-induced unbinding,” <i>Nano Letters</i>, vol. 20, no. 1. American Chemical Society, pp. 669–676, 2020.","mla":"Ucar, Mehmet C., and Reinhard Lipowsky. “Collective Force Generation by Molecular Motors Is Determined by Strain-Induced Unbinding.” <i>Nano Letters</i>, vol. 20, no. 1, American Chemical Society, 2020, pp. 669–76, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.9b04445\">10.1021/acs.nanolett.9b04445</a>."},"isi":1,"article_processing_charge":"No","page":"669-676","language":[{"iso":"eng"}],"author":[{"orcid":"0000-0003-0506-4217","full_name":"Ucar, Mehmet C","last_name":"Ucar","first_name":"Mehmet C","id":"50B2A802-6007-11E9-A42B-EB23E6697425"},{"full_name":"Lipowsky, Reinhard","last_name":"Lipowsky","first_name":"Reinhard"}],"month":"01","scopus_import":"1","volume":20,"publication_identifier":{"eissn":["1530-6992"],"issn":["1530-6984"]},"publication_status":"published","title":"Collective force generation by molecular motors is determined by strain-induced unbinding","corr_author":"1","abstract":[{"text":"In the living cell, we encounter a large variety of motile processes such as organelle transport and cytoskeleton remodeling. These processes are driven by motor proteins that generate force by transducing chemical free energy into mechanical work. In many cases, the molecular motors work in teams to collectively generate larger forces. Recent optical trapping experiments on small teams of cytoskeletal motors indicated that the collectively generated force increases with the size of the motor team but that this increase depends on the motor type and on whether the motors are studied in vitro or in vivo. Here, we use the theory of stochastic processes to describe the motion of N motors in a stationary optical trap and to compute the N-dependence of the collectively generated forces. We consider six distinct motor types, two kinesins, two dyneins, and two myosins. We show that the force increases always linearly with N but with a prefactor that depends on the performance of the single motor. Surprisingly, this prefactor increases for weaker motors with a lower stall force. This counter-intuitive behavior reflects the increased probability with which stronger motors detach from the filament during strain generation. Our theoretical results are in quantitative agreement with experimental data on small teams of kinesin-1 motors.","lang":"eng"}],"intvolume":"        20","publication":"Nano Letters","main_file_link":[{"url":"https://doi.org/10.1021/acs.nanolett.9b04445","open_access":"1"}],"quality_controlled":"1","day":"08","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2019-12-10T15:36:05Z","date_published":"2020-01-08T00:00:00Z","status":"public","year":"2020","issue":"1","pmid":1,"ddc":["570"],"publisher":"American Chemical Society","type":"journal_article","article_type":"letter_note","doi":"10.1021/acs.nanolett.9b04445","_id":"7166","oa_version":"Published Version","department":[{"_id":"EdHa"}],"date_updated":"2026-07-06T12:14:33Z","related_material":{"record":[{"status":"public","relation":"research_data","id":"9726"},{"status":"public","id":"9885","relation":"research_data"}]},"external_id":{"isi":["000507151600087"],"pmid":["31797672"]}},{"author":[{"first_name":"Chitrak","last_name":"Gupta","full_name":"Gupta, Chitrak"},{"full_name":"Khaniya, Umesh","last_name":"Khaniya","first_name":"Umesh"},{"full_name":"Chan, Chun Kit","first_name":"Chun Kit","last_name":"Chan"},{"full_name":"Dehez, Francois","last_name":"Dehez","first_name":"Francois"},{"first_name":"Mrinal","last_name":"Shekhar","full_name":"Shekhar, Mrinal"},{"full_name":"Gunner, M.R.","first_name":"M.R.","last_name":"Gunner"},{"orcid":"0000-0002-0977-7989","full_name":"Sazanov, Leonid A","last_name":"Sazanov","id":"338D39FE-F248-11E8-B48F-1D18A9856A87","first_name":"Leonid A"},{"last_name":"Chipot","first_name":"Christophe","full_name":"Chipot, Christophe"},{"last_name":"Singharoy","first_name":"Abhishek","full_name":"Singharoy, Abhishek"}],"citation":{"apa":"Gupta, C., Khaniya, U., Chan, C. K., Dehez, F., Shekhar, M., Gunner, M. R., … Singharoy, A. (2020). Supporting information. American Chemical Society. <a href=\"https://doi.org/10.1021/jacs.9b13450.s001\">https://doi.org/10.1021/jacs.9b13450.s001</a>","ama":"Gupta C, Khaniya U, Chan CK, et al. Supporting information. 2020. doi:<a href=\"https://doi.org/10.1021/jacs.9b13450.s001\">10.1021/jacs.9b13450.s001</a>","chicago":"Gupta, Chitrak, Umesh Khaniya, Chun Kit Chan, Francois Dehez, Mrinal Shekhar, M.R. Gunner, Leonid A Sazanov, Christophe Chipot, and Abhishek Singharoy. “Supporting Information.” American Chemical Society, 2020. <a href=\"https://doi.org/10.1021/jacs.9b13450.s001\">https://doi.org/10.1021/jacs.9b13450.s001</a>.","ista":"Gupta C, Khaniya U, Chan CK, Dehez F, Shekhar M, Gunner MR, Sazanov LA, Chipot C, Singharoy A. 2020. Supporting information, American Chemical Society, <a href=\"https://doi.org/10.1021/jacs.9b13450.s001\">10.1021/jacs.9b13450.s001</a>.","short":"C. Gupta, U. Khaniya, C.K. Chan, F. Dehez, M. Shekhar, M.R. Gunner, L.A. Sazanov, C. Chipot, A. Singharoy, (2020).","ieee":"C. Gupta <i>et al.</i>, “Supporting information.” American Chemical Society, 2020.","mla":"Gupta, Chitrak, et al. <i>Supporting Information</i>. American Chemical Society, 2020, doi:<a href=\"https://doi.org/10.1021/jacs.9b13450.s001\">10.1021/jacs.9b13450.s001</a>."},"date_published":"2020-05-20T00:00:00Z","article_processing_charge":"No","status":"public","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2021-07-23T12:02:39Z","publisher":"American Chemical Society","type":"research_data_reference","month":"05","year":"2020","abstract":[{"text":"Additional analyses of the trajectories","lang":"eng"}],"oa_version":"Published Version","title":"Supporting information","_id":"9713","doi":"10.1021/jacs.9b13450.s001","day":"20","date_updated":"2026-07-06T12:16:34Z","related_material":{"record":[{"status":"public","id":"8040","relation":"used_in_publication"}]},"department":[{"_id":"LeSa"}]},{"department":[{"_id":"EdHa"}],"day":"08","date_updated":"2026-07-06T12:14:33Z","related_material":{"record":[{"status":"public","id":"7166","relation":"used_in_publication"}]},"doi":"10.1021/acs.nanolett.9b04445.s002","oa_version":"Published Version","abstract":[{"text":"Data obtained from the fine-grained simulations used in Figures 2-5, data obtained from the coarse-grained numerical calculations used in Figure 6, and a sample script for the fine-grained simulation as a Jupyter notebook (ZIP)","lang":"eng"}],"_id":"9885","title":"MURL_Dataz","year":"2020","month":"01","type":"research_data_reference","publisher":"American Chemical Society","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","date_created":"2021-08-11T13:16:03Z","author":[{"orcid":"0000-0003-0506-4217","full_name":"Ucar, Mehmet C","last_name":"Ucar","id":"50B2A802-6007-11E9-A42B-EB23E6697425","first_name":"Mehmet C"},{"last_name":"Lipowsky","first_name":"Reinhard","full_name":"Lipowsky, Reinhard"}],"status":"public","date_published":"2020-01-08T00:00:00Z","article_processing_charge":"No","citation":{"ieee":"M. C. Ucar and R. Lipowsky, “MURL_Dataz.” American Chemical Society, 2020.","mla":"Ucar, Mehmet C., and Reinhard Lipowsky. <i>MURL_Dataz</i>. American Chemical Society, 2020, doi:<a href=\"https://doi.org/10.1021/acs.nanolett.9b04445.s002\">10.1021/acs.nanolett.9b04445.s002</a>.","short":"M.C. Ucar, R. Lipowsky, (2020).","ama":"Ucar MC, Lipowsky R. MURL_Dataz. 2020. doi:<a href=\"https://doi.org/10.1021/acs.nanolett.9b04445.s002\">10.1021/acs.nanolett.9b04445.s002</a>","apa":"Ucar, M. C., &#38; Lipowsky, R. (2020). MURL_Dataz. American Chemical Society. <a href=\"https://doi.org/10.1021/acs.nanolett.9b04445.s002\">https://doi.org/10.1021/acs.nanolett.9b04445.s002</a>","ista":"Ucar MC, Lipowsky R. 2020. MURL_Dataz, American Chemical Society, <a href=\"https://doi.org/10.1021/acs.nanolett.9b04445.s002\">10.1021/acs.nanolett.9b04445.s002</a>.","chicago":"Ucar, Mehmet C, and Reinhard Lipowsky. “MURL_Dataz.” American Chemical Society, 2020. <a href=\"https://doi.org/10.1021/acs.nanolett.9b04445.s002\">https://doi.org/10.1021/acs.nanolett.9b04445.s002</a>."}},{"month":"07","publication_identifier":{"issn":["2663-337X"]},"acknowledgement":"For the duration of his PhD, Rok was a recipient of a DOC fellowship of the Austrian Academy of Sciences.","oa":1,"citation":{"ieee":"R. Grah, “Gene regulation across scales – how biophysical constraints shape evolution,” Institute of Science and Technology Austria, 2020.","mla":"Grah, Rok. <i>Gene Regulation across Scales – How Biophysical Constraints Shape Evolution</i>. Institute of Science and Technology Austria, 2020, doi:<a href=\"https://doi.org/10.15479/AT:ISTA:8155\">10.15479/AT:ISTA:8155</a>.","ama":"Grah R. Gene regulation across scales – how biophysical constraints shape evolution. 2020. doi:<a href=\"https://doi.org/10.15479/AT:ISTA:8155\">10.15479/AT:ISTA:8155</a>","apa":"Grah, R. (2020). <i>Gene regulation across scales – how biophysical constraints shape evolution</i>. Institute of Science and Technology Austria. <a href=\"https://doi.org/10.15479/AT:ISTA:8155\">https://doi.org/10.15479/AT:ISTA:8155</a>","ista":"Grah R. 2020. Gene regulation across scales – how biophysical constraints shape evolution. Institute of Science and Technology Austria.","chicago":"Grah, Rok. “Gene Regulation across Scales – How Biophysical Constraints Shape Evolution.” Institute of Science and Technology Austria, 2020. <a href=\"https://doi.org/10.15479/AT:ISTA:8155\">https://doi.org/10.15479/AT:ISTA:8155</a>.","short":"R. Grah, Gene Regulation across Scales – How Biophysical Constraints Shape Evolution, Institute of Science and Technology Austria, 2020."},"article_processing_charge":"No","page":"310","project":[{"name":"Biophysically realistic genotype-phenotype maps for regulatory networks","_id":"267C84F4-B435-11E9-9278-68D0E5697425"}],"language":[{"iso":"eng"}],"author":[{"last_name":"Grah","id":"483E70DE-F248-11E8-B48F-1D18A9856A87","first_name":"Rok","orcid":"0000-0003-2539-3560","full_name":"Grah, Rok"}],"degree_awarded":"PhD","day":"24","corr_author":"1","publication_status":"published","title":"Gene regulation across scales – how biophysical constraints shape evolution","has_accepted_license":"1","abstract":[{"text":"In the thesis we focus on the interplay of the biophysics and evolution of gene regulation. We start by addressing how the type of prokaryotic gene regulation – activation and repression – affects spurious binding to DNA, also known as\r\ntranscriptional crosstalk. We propose that regulatory interference caused by excess regulatory proteins in the dense cellular medium – global crosstalk – could be a factor in determining which type of gene regulatory network is evolutionarily preferred. Next,we use a normative approach in eukaryotic gene regulation to describe minimal\r\nnon-equilibrium enhancer models that optimize so-called regulatory phenotypes. We find a class of models that differ from standard thermodynamic equilibrium models by a single parameter that notably increases the regulatory performance. Next chapter addresses the question of genotype-phenotype-fitness maps of higher dimensional phenotypes. We show that our biophysically realistic approach allows us to understand how the mechanisms of promoter function constrain genotypephenotype maps, and how they affect the evolutionary trajectories of promoters.\r\nIn the last chapter we ask whether the intrinsic instability of gene duplication and amplification provides a generic alternative to canonical gene regulation. Using mathematical modeling, we show that amplifications can tune gene expression in many environments, including those where transcription factor-based schemes are\r\nhard to evolve or maintain. ","lang":"eng"}],"OA_place":"publisher","year":"2020","ddc":["530","570"],"publisher":"Institute of Science and Technology Austria","type":"dissertation","date_created":"2020-07-23T09:51:28Z","user_id":"ba8df636-2132-11f1-aed0-ed93e2281fdd","date_published":"2020-07-24T00:00:00Z","status":"public","department":[{"_id":"CaGu"},{"_id":"GaTk"}],"date_updated":"2026-07-06T12:43:42Z","related_material":{"record":[{"id":"7569","relation":"part_of_dissertation","status":"public"},{"id":"7652","relation":"part_of_dissertation","status":"public"},{"relation":"part_of_dissertation","id":"7675","status":"public"}]},"doi":"10.15479/AT:ISTA:8155","supervisor":[{"last_name":"Guet","id":"47F8433E-F248-11E8-B48F-1D18A9856A87","first_name":"Calin C","orcid":"0000-0001-6220-2052","full_name":"Guet, Calin C"},{"orcid":"0000-0002-6699-1455","full_name":"Tkačik, Gašper","last_name":"Tkačik","first_name":"Gašper","id":"3D494DCA-F248-11E8-B48F-1D18A9856A87"}],"_id":"8155","file":[{"date_created":"2020-07-27T12:00:07Z","content_type":"application/pdf","success":1,"relation":"main_file","file_size":16638998,"file_name":"Thesis_RokGrah_200727_convertedNew.pdf","file_id":"8176","creator":"rgrah","access_level":"open_access","date_updated":"2020-07-27T12:00:07Z"},{"relation":"main_file","content_type":"application/zip","date_created":"2020-07-27T12:02:23Z","date_updated":"2020-07-30T13:04:55Z","access_level":"closed","creator":"rgrah","file_id":"8177","file_name":"Thesis_new.zip","file_size":347459978}],"alternative_title":["ISTA Thesis"],"oa_version":"Published Version","file_date_updated":"2020-07-30T13:04:55Z"}]