---
OA_place: repository
_id: '17352'
abstract:
- lang: eng
  text: "We prove upper bounds on the $L^\\infty$-Wasserstein distance from optimal\r\ntransport
    between strongly log-concave probability densities and log-Lipschitz\r\nperturbations.
    In the simplest setting, such a bound amounts to a\r\ntransport-information inequality
    involving the $L^\\infty$-Wasserstein metric\r\nand the relative $L^\\infty$-Fisher
    information. We show that this inequality\r\ncan be sharpened significantly in
    situations where the involved densities are\r\nanisotropic. Our proof is based
    on probabilistic techniques using Langevin\r\ndynamics. As an application of these
    results, we obtain sharp exponential rates\r\nof convergence in Fisher's infinitesimal
    model from quantitative genetics,\r\ngeneralising recent results by Calvez, Poyato,
    and Santambrogio in dimension 1\r\nto arbitrary dimensions."
article_number: '2402.04151'
article_processing_charge: No
arxiv: 1
author:
- first_name: Kseniia
  full_name: Khudiakova, Kseniia
  id: 4E6DC800-AE37-11E9-AC72-31CAE5697425
  last_name: Khudiakova
  orcid: 0000-0002-6246-1465
- first_name: Jan
  full_name: Maas, Jan
  id: 4C5696CE-F248-11E8-B48F-1D18A9856A87
  last_name: Maas
  orcid: 0000-0002-0845-1338
- first_name: Francesco
  full_name: Pedrotti, Francesco
  id: d3ac8ac6-dc8d-11ea-abe3-e2a9628c4c3c
  last_name: Pedrotti
citation:
  ama: Khudiakova K, Maas J, Pedrotti F. L∞-optimal transport of anisotropic log-concave
    measures and exponential convergence in Fisher’s infinitesimal model. <i>arXiv</i>.
    doi:<a href="https://doi.org/10.48550/arXiv.2402.04151">10.48550/arXiv.2402.04151</a>
  apa: Khudiakova, K., Maas, J., &#38; Pedrotti, F. (n.d.). L∞-optimal transport of
    anisotropic log-concave measures and exponential convergence in Fisher’s infinitesimal
    model. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2402.04151">https://doi.org/10.48550/arXiv.2402.04151</a>
  chicago: Khudiakova, Kseniia, Jan Maas, and Francesco Pedrotti. “L∞-Optimal Transport
    of Anisotropic Log-Concave Measures and Exponential Convergence in Fisher’s Infinitesimal
    Model.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2402.04151">https://doi.org/10.48550/arXiv.2402.04151</a>.
  ieee: K. Khudiakova, J. Maas, and F. Pedrotti, “L∞-optimal transport of anisotropic
    log-concave measures and exponential convergence in Fisher’s infinitesimal model,”
    <i>arXiv</i>. .
  ista: Khudiakova K, Maas J, Pedrotti F. L∞-optimal transport of anisotropic log-concave
    measures and exponential convergence in Fisher’s infinitesimal model. arXiv, 2402.04151.
  mla: Khudiakova, Kseniia, et al. “L∞-Optimal Transport of Anisotropic Log-Concave
    Measures and Exponential Convergence in Fisher’s Infinitesimal Model.” <i>ArXiv</i>,
    2402.04151, doi:<a href="https://doi.org/10.48550/arXiv.2402.04151">10.48550/arXiv.2402.04151</a>.
  short: K. Khudiakova, J. Maas, F. Pedrotti, ArXiv (n.d.).
corr_author: '1'
date_created: 2024-07-31T08:07:40Z
date_published: 2024-02-07T00:00:00Z
date_updated: 2026-04-07T13:00:02Z
day: '07'
department:
- _id: JaMa
doi: 10.48550/arXiv.2402.04151
external_id:
  arxiv:
  - '2402.04151'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2402.04151
month: '02'
oa: 1
oa_version: Preprint
project:
- _id: fc31cba2-9c52-11eb-aca3-ff467d239cd2
  grant_number: F6504
  name: Taming Complexity in Partial Differential Systems
- _id: 34d33d68-11ca-11ed-8bc3-ec13763c0ca8
  grant_number: '26293'
  name: The impact of deleterious mutations on small populations
publication: arXiv
publication_status: draft
related_material:
  record:
  - id: '20050'
    relation: later_version
    status: public
  - id: '17336'
    relation: dissertation_contains
    status: public
status: public
title: L∞-optimal transport of anisotropic log-concave measures and exponential convergence
  in Fisher's infinitesimal model
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
OA_place: repository
_id: '17353'
abstract:
- lang: eng
  text: "In this paper we derive estimates for the Hessian of the logarithm\r\n(log-Hessian)
    for solutions to the heat equation. For initial data in the form\r\nof log-Lipschitz
    perturbation of strongly log-concave measures, the log-Hessian\r\nadmits an explicit,
    uniform (in space) lower bound. This yields a new estimate\r\nfor the Lipschitz
    constant of a transport map pushing forward the standard\r\nGaussian to a measure
    in this class. Further connections are discussed with\r\nscore-based diffusion
    models and improved Gaussian logarithmic Sobolev\r\ninequalities. Finally, we
    show that assuming only fast decay of the tails of\r\nthe initial datum does not
    suffice to guarantee uniform log-Hessian upper\r\nbounds."
article_number: '2404.15205'
article_processing_charge: No
arxiv: 1
author:
- first_name: Giovanni
  full_name: Brigati, Giovanni
  id: 63ff57e8-1fbb-11ee-88f2-f558ffc59cf1
  last_name: Brigati
- first_name: Francesco
  full_name: Pedrotti, Francesco
  id: d3ac8ac6-dc8d-11ea-abe3-e2a9628c4c3c
  last_name: Pedrotti
citation:
  ama: Brigati G, Pedrotti F. Heat flow, log-concavity, and Lipschitz transport maps.
    <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2404.15205">10.48550/arXiv.2404.15205</a>
  apa: Brigati, G., &#38; Pedrotti, F. (n.d.). Heat flow, log-concavity, and Lipschitz
    transport maps. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2404.15205">https://doi.org/10.48550/arXiv.2404.15205</a>
  chicago: Brigati, Giovanni, and Francesco Pedrotti. “Heat Flow, Log-Concavity, and
    Lipschitz Transport Maps.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2404.15205">https://doi.org/10.48550/arXiv.2404.15205</a>.
  ieee: G. Brigati and F. Pedrotti, “Heat flow, log-concavity, and Lipschitz transport
    maps,” <i>arXiv</i>. .
  ista: Brigati G, Pedrotti F. Heat flow, log-concavity, and Lipschitz transport maps.
    arXiv, 2404.15205.
  mla: Brigati, Giovanni, and Francesco Pedrotti. “Heat Flow, Log-Concavity, and Lipschitz
    Transport Maps.” <i>ArXiv</i>, 2404.15205, doi:<a href="https://doi.org/10.48550/arXiv.2404.15205">10.48550/arXiv.2404.15205</a>.
  short: G. Brigati, F. Pedrotti, ArXiv (n.d.).
corr_author: '1'
date_created: 2024-07-31T08:17:14Z
date_published: 2024-05-08T00:00:00Z
date_updated: 2026-04-07T13:00:02Z
day: '08'
department:
- _id: JaMa
doi: 10.48550/arXiv.2404.15205
external_id:
  arxiv:
  - '2404.15205'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2404.15205
month: '05'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: draft
related_material:
  record:
  - id: '20591'
    relation: later_version
    status: public
  - id: '17336'
    relation: dissertation_contains
    status: public
status: public
title: Heat flow, log-concavity, and Lipschitz transport maps
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
OA_place: repository
_id: '17361'
abstract:
- lang: eng
  text: We present symplectic structures on the shape space of unparameterized space
    curves that generalize the classical Marsden-Weinstein structure. Our method integrates
    the Liouville 1-form of the Marsden-Weinstein structure with Riemannian structures
    that have been introduced in mathematical shape analysis. We also derive Hamiltonian
    vector fields for several classical Hamiltonian functions with respect to these
    new symplectic structures.
acknowledgement: The authors are grateful to Boris Khesin for valuable comments on
  the MW symplectic structure and S. Ishida thanks Albert Chern for insightful discussions
  on space curves and Chris Wojtan for his continuous support. M. Bauer was partially
  supported by NSF grant DMS-1953244 and by the Binational Science Foundation (BSF).
  S. Ishida was partially supported by ERC Consolidator Grant 101045083 “CoDiNA” funded
  by the European Research Council. Some figures were generated by the software Houdini
  and its education license was provided by SideFX.
article_processing_charge: No
arxiv: 1
author:
- first_name: Martin
  full_name: Bauer, Martin
  last_name: Bauer
- first_name: Sadashige
  full_name: Ishida, Sadashige
  id: 6F7C4B96-A8E9-11E9-A7CA-09ECE5697425
  last_name: Ishida
  orcid: 0000-0002-3121-3100
- first_name: Peter W.
  full_name: Michor, Peter W.
  last_name: Michor
citation:
  ama: Bauer M, Ishida S, Michor PW. Symplectic structures on the space of space curves.
    <i>arXiv</i>. doi:<a href="https://doi.org/10.48550/arXiv.2407.19908">10.48550/arXiv.2407.19908</a>
  apa: Bauer, M., Ishida, S., &#38; Michor, P. W. (n.d.). Symplectic structures on
    the space of space curves. <i>arXiv</i>. <a href="https://doi.org/10.48550/arXiv.2407.19908">https://doi.org/10.48550/arXiv.2407.19908</a>
  chicago: Bauer, Martin, Sadashige Ishida, and Peter W. Michor. “Symplectic Structures
    on the Space of Space Curves.” <i>ArXiv</i>, n.d. <a href="https://doi.org/10.48550/arXiv.2407.19908">https://doi.org/10.48550/arXiv.2407.19908</a>.
  ieee: M. Bauer, S. Ishida, and P. W. Michor, “Symplectic structures on the space
    of space curves,” <i>arXiv</i>. .
  ista: Bauer M, Ishida S, Michor PW. Symplectic structures on the space of space
    curves. arXiv, <a href="https://doi.org/10.48550/arXiv.2407.19908">10.48550/arXiv.2407.19908</a>.
  mla: Bauer, Martin, et al. “Symplectic Structures on the Space of Space Curves.”
    <i>ArXiv</i>, doi:<a href="https://doi.org/10.48550/arXiv.2407.19908">10.48550/arXiv.2407.19908</a>.
  short: M. Bauer, S. Ishida, P.W. Michor, ArXiv (n.d.).
date_created: 2024-08-01T06:34:08Z
date_published: 2024-07-29T00:00:00Z
date_updated: 2026-04-28T09:59:01Z
day: '29'
department:
- _id: GradSch
- _id: ChWo
doi: 10.48550/arXiv.2407.19908
external_id:
  arxiv:
  - '2407.19908'
keyword:
- space of space curves
- symplectic stuctures
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2407.19908
month: '07'
oa: 1
oa_version: Preprint
project:
- _id: 34bc2376-11ca-11ed-8bc3-9a3b3961a088
  grant_number: '101045083'
  name: Computational Discovery of Numerical Algorithms for Animation and Simulation
    of Natural Phenomena
publication: arXiv
publication_status: draft
related_material:
  record:
  - id: '20551'
    relation: dissertation_contains
    status: public
  - id: '21743'
    relation: later_version
    status: public
status: public
title: Symplectic structures on the space of space curves
type: preprint
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2024'
...
---
_id: '17362'
abstract:
- lang: eng
  text: This is the supplementary data for the paper titled "Single-nucleus atlas
    of the Artemia female reproductive system suggests germline repression of the
    Z chromosome", where we described the generation and analysis of single-nucleus
    expression and chromatin-accessibility data from the female reproductive system
    of Artemia franciscana. We compared our dataset to the published Drosophila single-nucleus
    data (over 400 million years of divergence) and highlighted the extreme conservation
    of several of the molecular pathways of oogenesis and meiosis. We found evidence
    of global transcriptional quiescence and chromatin condensation in late germ cells,
    highlighting the conserved role of this repressive stage in arthropod oogenesis.
    Additionally, we explored the expression patterns of the ZW sex chromosomes during
    oogenesis. Our data shows that the Z-chromosome is consistently downregulated
    in germline cells. While this is partly driven by a lack of dosage compensation
    in the germline, a subset of cells show stronger repression of the Z chromosome.
acknowledged_ssus:
- _id: ScienComp
article_processing_charge: No
author:
- first_name: Marwan N
  full_name: Elkrewi, Marwan N
  id: 0B46FACA-A8E1-11E9-9BD3-79D1E5697425
  last_name: Elkrewi
  orcid: 0000-0002-5328-7231
- first_name: Beatriz
  full_name: Vicoso, Beatriz
  id: 49E1C5C6-F248-11E8-B48F-1D18A9856A87
  last_name: Vicoso
  orcid: 0000-0002-4579-8306
citation:
  ama: 'Elkrewi MN, Vicoso B. Data for: “Single-nucleus atlas of the Artemia female
    reproductive system suggests germline repression of the Z chromosome.” 2024. doi:<a
    href="https://doi.org/10.15479/AT:ISTA:17362">10.15479/AT:ISTA:17362</a>'
  apa: 'Elkrewi, M. N., &#38; Vicoso, B. (2024). Data for: “Single-nucleus atlas of
    the Artemia female reproductive system suggests germline repression of the Z chromosome.”
    Institute of Science and Technology Austria. <a href="https://doi.org/10.15479/AT:ISTA:17362">https://doi.org/10.15479/AT:ISTA:17362</a>'
  chicago: 'Elkrewi, Marwan N, and Beatriz Vicoso. “Data for: ‘Single-Nucleus Atlas
    of the Artemia Female Reproductive System Suggests Germline Repression of the
    Z Chromosome.’” Institute of Science and Technology Austria, 2024. <a href="https://doi.org/10.15479/AT:ISTA:17362">https://doi.org/10.15479/AT:ISTA:17362</a>.'
  ieee: 'M. N. Elkrewi and B. Vicoso, “Data for: ‘Single-nucleus atlas of the Artemia
    female reproductive system suggests germline repression of the Z chromosome.’”
    Institute of Science and Technology Austria, 2024.'
  ista: 'Elkrewi MN, Vicoso B. 2024. Data for: ‘Single-nucleus atlas of the Artemia
    female reproductive system suggests germline repression of the Z chromosome’,
    Institute of Science and Technology Austria, <a href="https://doi.org/10.15479/AT:ISTA:17362">10.15479/AT:ISTA:17362</a>.'
  mla: 'Elkrewi, Marwan N., and Beatriz Vicoso. <i>Data for: “Single-Nucleus Atlas
    of the Artemia Female Reproductive System Suggests Germline Repression of the
    Z Chromosome.”</i> Institute of Science and Technology Austria, 2024, doi:<a href="https://doi.org/10.15479/AT:ISTA:17362">10.15479/AT:ISTA:17362</a>.'
  short: M.N. Elkrewi, B. Vicoso, (2024).
corr_author: '1'
date_created: 2024-08-02T07:27:45Z
date_published: 2024-08-05T00:00:00Z
date_updated: 2026-04-16T12:20:41Z
day: '05'
ddc:
- '576'
department:
- _id: GradSch
- _id: BeVi
doi: 10.15479/AT:ISTA:17362
file:
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  checksum: 26b5d41b3103f4284dd97d56e370a5b6
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  creator: melkrewi
  date_created: 2024-08-05T22:24:18Z
  date_updated: 2024-08-05T22:24:18Z
  file_id: '17394'
  file_name: README.txt
  file_size: 2465
  relation: main_file
  success: 1
- access_level: open_access
  checksum: 95adab5e36148015da313505e3910707
  content_type: application/x-zip-compressed
  creator: melkrewi
  date_created: 2024-08-05T23:28:52Z
  date_updated: 2024-08-05T23:28:52Z
  file_id: '17395'
  file_name: Data_artemia_single_nucleus_atlas.zip
  file_size: 2526735400
  relation: main_file
  success: 1
file_date_updated: 2024-08-05T23:28:52Z
has_accepted_license: '1'
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: 34ae1506-11ca-11ed-8bc3-c14f4c474396
  grant_number: F8810
  name: The highjacking of meiosis for asexual reproduction
publisher: Institute of Science and Technology Austria
related_material:
  record:
  - id: '17890'
    relation: used_in_publication
    status: public
status: public
title: 'Data for: "Single-nucleus atlas of the Artemia female reproductive system
  suggests germline repression of the Z chromosome"'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: research_data
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
OA_place: publisher
_id: '17368'
abstract:
- lang: eng
  text: "Recent advancements in molecular diagnostic techniques have enabled the collection
    of\r\nmultiple types of omics data from patients, including genomics, epigenomics,
    proteomics,\r\nand transcriptomics. However, we lack effective methods for integrating
    all these different\r\ndata types and combining them with clinical outcomes to
    study the molecular mechanisms\r\nthat govern pathological phenotypes. We present
    multi-omics BayesW, a penalized Bayesian\r\nregression method that can handle
    general omics data for survival analysis of time-to-event\r\nphenotypes. Our method
    can: (1) accommodate incomplete data by allowing censored\r\nindividuals, (2)
    use continuous time-to-event data to test associations of markers with a\r\nphenotype
    and (3) estimate effects jointly while allowing for independent groups of biological\r\nmarkers.
    Extensive simulations using planted signals on real data demonstrate that our
    model\r\naccurately retrieves the true parameters of the model while controlling
    for false discoveries\r\nand maintaining the expected prediction accuracy. We
    address data correlations by estimating\r\nthe effects jointly, even between omic
    groups, while also estimating the individual variance\r\nexplained by each group.
    We apply our model to two datasets. Using 18,000 individuals from\r\nthe Generation
    Scotland study we model the association of time at onset of Type 2 Diabetes,\r\nStroke,
    Ischemic Disease, and Osteoarthritis from baseline study entry, with 831,724 CpG\r\nmethylation
    probes. We find that large proportions of variation in disease onset times can\r\nbe
    attributed to methylation as measured in whole blood at baseline in individuals
    without\r\ndisease symptoms. We then apply our model to The Cancer Genome Atlas
    (TCGA) pan-cancer\r\ndataset, in which we use 5 types of omics: copy number variation,
    epigenetics, somatic\r\nmutations, miRNA, and gene expression. For cancer survival
    age-at-onset we find that, when\r\nfitting the 5 groups together, almost all variation
    attributable to \"omics\" data is explained by\r\nDNA methylation. When considering
    progression times, both methylation and gene expression\r\nexplain a large part
    of the variance. We found 2 genes that are significantly associated (95%\r\nposterior
    inclusion probability) with cancer survival time, conditional on all other genome-wide\r\nomics
    data variation. Owing to the vast variability of mechanisms characterizing different\r\ncancers,
    there are likely few specific genes with a strong signal in a pan-cancer setting.
    Taken\r\ntogether, we showed the applicability of our multi-omics BayesW model
    to a wide-range of\r\nbiological questions in multi-omics data.\r\n"
alternative_title:
- ISTA Master's Thesis
article_processing_charge: No
author:
- first_name: Ariadna
  full_name: Villanueva Marijuan, Ariadna
  id: e0ae4864-133f-11ed-8f02-adaa8dd27540
  last_name: Villanueva Marijuan
citation:
  ama: Villanueva Marijuan A. Bayesian linear regression for analyzing general omics
    data with time-to-event phenotypes. 2024. doi:<a href="https://doi.org/10.15479/at:ista:17368">10.15479/at:ista:17368</a>
  apa: Villanueva Marijuan, A. (2024). <i>Bayesian linear regression for analyzing
    general omics data with time-to-event phenotypes</i>. Institute of Science and
    Technology Austria. <a href="https://doi.org/10.15479/at:ista:17368">https://doi.org/10.15479/at:ista:17368</a>
  chicago: Villanueva Marijuan, Ariadna. “Bayesian Linear Regression for Analyzing
    General Omics Data with Time-to-Event Phenotypes.” Institute of Science and Technology
    Austria, 2024. <a href="https://doi.org/10.15479/at:ista:17368">https://doi.org/10.15479/at:ista:17368</a>.
  ieee: A. Villanueva Marijuan, “Bayesian linear regression for analyzing general
    omics data with time-to-event phenotypes,” Institute of Science and Technology
    Austria, 2024.
  ista: Villanueva Marijuan A. 2024. Bayesian linear regression for analyzing general
    omics data with time-to-event phenotypes. Institute of Science and Technology
    Austria.
  mla: Villanueva Marijuan, Ariadna. <i>Bayesian Linear Regression for Analyzing General
    Omics Data with Time-to-Event Phenotypes</i>. Institute of Science and Technology
    Austria, 2024, doi:<a href="https://doi.org/10.15479/at:ista:17368">10.15479/at:ista:17368</a>.
  short: A. Villanueva Marijuan, Bayesian Linear Regression for Analyzing General
    Omics Data with Time-to-Event Phenotypes, Institute of Science and Technology
    Austria, 2024.
corr_author: '1'
date_created: 2024-08-02T10:52:40Z
date_published: 2024-08-13T00:00:00Z
date_updated: 2026-04-07T13:03:41Z
day: '13'
ddc:
- '610'
degree_awarded: MS
department:
- _id: GradSch
- _id: MaRo
doi: 10.15479/at:ista:17368
file:
- access_level: open_access
  checksum: 0c2daa174609f0c00919dccc5701d375
  content_type: application/pdf
  creator: avillanu
  date_created: 2024-08-14T11:51:24Z
  date_updated: 2025-02-14T23:30:03Z
  embargo: 2025-02-14
  file_id: '17433'
  file_name: Masters_thesis_AriadnaVillanueva.pdf
  file_size: 13052436
  relation: main_file
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  checksum: e9ed4465dfa539ac4c3a8d4d0b6271a1
  content_type: application/zip
  creator: avillanu
  date_created: 2024-08-14T11:51:57Z
  date_updated: 2025-02-14T23:30:03Z
  embargo_to: open_access
  file_id: '17434'
  file_name: Masters thesis-AriadnaVillanueva.zip
  file_size: 45642547
  relation: source_file
file_date_updated: 2025-02-14T23:30:03Z
has_accepted_license: '1'
keyword:
- Epigenetics
- Multi-omics
- Bayesian regression
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
page: '60'
publication_identifier:
  issn:
  - 2791-4585
publication_status: published
publisher: Institute of Science and Technology Austria
status: public
supervisor:
- first_name: Matthew Richard
  full_name: Robinson, Matthew Richard
  id: E5D42276-F5DA-11E9-8E24-6303E6697425
  last_name: Robinson
  orcid: 0000-0001-8982-8813
title: Bayesian linear regression for analyzing general omics data with time-to-event
  phenotypes
tmp:
  image: /images/cc_by_nc_sa.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-sa/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC
    BY-NC-SA 4.0)
  short: CC BY-NC-SA (4.0)
type: dissertation
user_id: ba8df636-2132-11f1-aed0-ed93e2281fdd
year: '2024'
...
---
_id: '17372'
abstract:
- lang: eng
  text: 'In this paper, we investigate the global well-posedness of reaction-diffusion
    systems with transport noise on the  d-dimensional torus. We show new global well-posedness
    results for a large class of scalar equations (e.g. the Allen-Cahn equation),
    and dissipative systems (e.g. equations in coagulation dynamics). Moreover, we
    prove global well-posedness for two weakly dissipative systems: Lotka-Volterra
    equations for  d∈{1,2,3,4}  and the Brusselator for  d∈{1,2,3}. Many of the results
    are also new without transport noise. The proofs are based on maximal regularity
    techniques, positivity results, and sharp blow-up criteria developed in our recent
    works, combined with energy estimates based on Itô''s formula and stochastic Gronwall
    inequalities. Key novelties include the introduction of new  Lζ -coercivity/dissipativity
    conditions and the development of an  Lp(Lq) -framework for systems of reaction-diffusion
    equations, which are needed when treating dimensions  d∈{2,3}  in the case of
    cubic or higher order nonlinearities.'
acknowledgement: The first author’s research was supported by the European Research
  Council (ERC) under the European Union’s Horizon 2020 research and innovation programme
  grant 948819. . The second author’s research was supported by the VICI subsidy VI.C.212.027
  of the Netherlands Organisation for Scientific Research (NWO).
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Antonio
  full_name: Agresti, Antonio
  id: 673cd0cc-9b9a-11eb-b144-88f30e1fbb72
  last_name: Agresti
  orcid: 0000-0002-9573-2962
- first_name: Mark
  full_name: Veraar, Mark
  last_name: Veraar
citation:
  ama: 'Agresti A, Veraar M. Reaction-diffusion equations with transport noise and
    critical superlinear diffusion: Global well-posedness of weakly dissipative systems.
    <i>SIAM Journal on Mathematical Analysis</i>. 2024;56(4):4870-4927. doi:<a href="https://doi.org/10.1137/23M1562482">10.1137/23M1562482</a>'
  apa: 'Agresti, A., &#38; Veraar, M. (2024). Reaction-diffusion equations with transport
    noise and critical superlinear diffusion: Global well-posedness of weakly dissipative
    systems. <i>SIAM Journal on Mathematical Analysis</i>. Society for Industrial
    and Applied Mathematics. <a href="https://doi.org/10.1137/23M1562482">https://doi.org/10.1137/23M1562482</a>'
  chicago: 'Agresti, Antonio, and Mark Veraar. “Reaction-Diffusion Equations with
    Transport Noise and Critical Superlinear Diffusion: Global Well-Posedness of Weakly
    Dissipative Systems.” <i>SIAM Journal on Mathematical Analysis</i>. Society for
    Industrial and Applied Mathematics, 2024. <a href="https://doi.org/10.1137/23M1562482">https://doi.org/10.1137/23M1562482</a>.'
  ieee: 'A. Agresti and M. Veraar, “Reaction-diffusion equations with transport noise
    and critical superlinear diffusion: Global well-posedness of weakly dissipative
    systems,” <i>SIAM Journal on Mathematical Analysis</i>, vol. 56, no. 4. Society
    for Industrial and Applied Mathematics, pp. 4870–4927, 2024.'
  ista: 'Agresti A, Veraar M. 2024. Reaction-diffusion equations with transport noise
    and critical superlinear diffusion: Global well-posedness of weakly dissipative
    systems. SIAM Journal on Mathematical Analysis. 56(4), 4870–4927.'
  mla: 'Agresti, Antonio, and Mark Veraar. “Reaction-Diffusion Equations with Transport
    Noise and Critical Superlinear Diffusion: Global Well-Posedness of Weakly Dissipative
    Systems.” <i>SIAM Journal on Mathematical Analysis</i>, vol. 56, no. 4, Society
    for Industrial and Applied Mathematics, 2024, pp. 4870–927, doi:<a href="https://doi.org/10.1137/23M1562482">10.1137/23M1562482</a>.'
  short: A. Agresti, M. Veraar, SIAM Journal on Mathematical Analysis 56 (2024) 4870–4927.
corr_author: '1'
date_created: 2024-08-04T22:01:21Z
date_published: 2024-08-01T00:00:00Z
date_updated: 2025-09-08T08:46:57Z
day: '01'
department:
- _id: JuFi
doi: 10.1137/23M1562482
ec_funded: 1
external_id:
  arxiv:
  - '2301.06897'
  isi:
  - '001315424500021'
intvolume: '        56'
isi: 1
issue: '4'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2301.06897
month: '08'
oa: 1
oa_version: Preprint
page: 4870-4927
project:
- _id: 0aa76401-070f-11eb-9043-b5bb049fa26d
  call_identifier: H2020
  grant_number: '948819'
  name: Bridging Scales in Random Materials
publication: SIAM Journal on Mathematical Analysis
publication_identifier:
  eissn:
  - 1095-7154
  issn:
  - 0036-1410
publication_status: published
publisher: Society for Industrial and Applied Mathematics
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Reaction-diffusion equations with transport noise and critical superlinear
  diffusion: Global well-posedness of weakly dissipative systems'
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 56
year: '2024'
...
---
_id: '17373'
abstract:
- lang: eng
  text: Scanning Kelvin probe microscopy (SKPM) is a powerful technique for investigating
    the electrostatic properties of material surfaces, enabling the imaging of variations
    in work function, topology, surface charge density, or combinations thereof. Regardless
    of the underlying signal source, SKPM results in a voltage image, which is spatially
    distorted due to the finite size of the probe, long-range electrostatic interactions,
    mechanical and electrical noise, and the finite response time of the electronics.
    In order to recover the underlying signal, it is necessary to deconvolve the measurement
    with an appropriate point spread function (PSF) that accounts the aforementioned
    distortions, but determining this PSF is difficult. Here, we describe how such
    PSFs can be determined experimentally and show how they can be used to recover
    the underlying information of interest. We first consider the physical principles
    that enable SKPM and discuss how these affect the system PSF. We then show how
    one can experimentally measure PSFs by looking at well-defined features, and that
    these compare well to simulated PSFs, provided scans are performed extremely slowly
    and carefully. Next, we work at realistic scan speeds and show that the idealized
    PSFs fail to capture temporal distortions in the scan direction. While simulating
    PSFs for these situations would be quite challenging, we show that measuring PSFs
    with similar scan conditions works well. Our approach clarifies the basic principles
    and inherent challenges to SKPM measurements and gives practical methods to improve
    results.
acknowledged_ssus:
- _id: M-Shop
- _id: NanoFab
- _id: LifeSc
- _id: ScienComp
acknowledgement: This project has received funding from the European Research Council
  (ERC) under the European Union’s Horizon 2020 research and innovation program (Grant
  Agreement No. 949120). This research was supported by the Scientific Service Units
  of the Institute of Science and Technology Austria (ISTA) through resources provided
  by the Miba Machine Shop, Nanofabrication Facility, Scientific Computing Facility,
  and Lab Support Facility. The authors wish to thank Dmytro Rak and Juan Carlos Sobarzo
  for letting us use their equipment. The authors wish to thank the contributions
  of the whole Waitukaitis Group for useful discussions and feedback.
article_number: '045305'
article_processing_charge: No
article_type: original
author:
- first_name: Isaac C
  full_name: Lenton, Isaac C
  id: a550210f-223c-11ec-8182-e2d45e817efb
  last_name: Lenton
  orcid: 0000-0002-5010-6984
- first_name: Felix
  full_name: Pertl, Felix
  id: 6313aec0-15b2-11ec-abd3-ed67d16139af
  last_name: Pertl
  orcid: 0000-0003-0463-5794
- first_name: Lubuna B
  full_name: Shafeek, Lubuna B
  id: 3CD37A82-F248-11E8-B48F-1D18A9856A87
  last_name: Shafeek
  orcid: 0000-0001-7180-6050
- first_name: Scott R
  full_name: Waitukaitis, Scott R
  id: 3A1FFC16-F248-11E8-B48F-1D18A9856A87
  last_name: Waitukaitis
  orcid: 0000-0002-2299-3176
citation:
  ama: 'Lenton IC, Pertl F, Shafeek LB, Waitukaitis SR. Beyond the blur: Using experimentally
    determined point spread functions to improve scanning Kelvin probe imaging. <i>Journal
    of Applied Physics</i>. 2024;136(4). doi:<a href="https://doi.org/10.1063/5.0215151">10.1063/5.0215151</a>'
  apa: 'Lenton, I. C., Pertl, F., Shafeek, L. B., &#38; Waitukaitis, S. R. (2024).
    Beyond the blur: Using experimentally determined point spread functions to improve
    scanning Kelvin probe imaging. <i>Journal of Applied Physics</i>. AIP Publishing.
    <a href="https://doi.org/10.1063/5.0215151">https://doi.org/10.1063/5.0215151</a>'
  chicago: 'Lenton, Isaac C, Felix Pertl, Lubuna B Shafeek, and Scott R Waitukaitis.
    “Beyond the Blur: Using Experimentally Determined Point Spread Functions to Improve
    Scanning Kelvin Probe Imaging.” <i>Journal of Applied Physics</i>. AIP Publishing,
    2024. <a href="https://doi.org/10.1063/5.0215151">https://doi.org/10.1063/5.0215151</a>.'
  ieee: 'I. C. Lenton, F. Pertl, L. B. Shafeek, and S. R. Waitukaitis, “Beyond the
    blur: Using experimentally determined point spread functions to improve scanning
    Kelvin probe imaging,” <i>Journal of Applied Physics</i>, vol. 136, no. 4. AIP
    Publishing, 2024.'
  ista: 'Lenton IC, Pertl F, Shafeek LB, Waitukaitis SR. 2024. Beyond the blur: Using
    experimentally determined point spread functions to improve scanning Kelvin probe
    imaging. Journal of Applied Physics. 136(4), 045305.'
  mla: 'Lenton, Isaac C., et al. “Beyond the Blur: Using Experimentally Determined
    Point Spread Functions to Improve Scanning Kelvin Probe Imaging.” <i>Journal of
    Applied Physics</i>, vol. 136, no. 4, 045305, AIP Publishing, 2024, doi:<a href="https://doi.org/10.1063/5.0215151">10.1063/5.0215151</a>.'
  short: I.C. Lenton, F. Pertl, L.B. Shafeek, S.R. Waitukaitis, Journal of Applied
    Physics 136 (2024).
corr_author: '1'
date_created: 2024-08-04T22:01:21Z
date_published: 2024-07-28T00:00:00Z
date_updated: 2025-09-08T08:47:42Z
day: '28'
ddc:
- '530'
department:
- _id: ScWa
- _id: NanoFab
doi: 10.1063/5.0215151
ec_funded: 1
external_id:
  isi:
  - '001281681100003'
file:
- access_level: open_access
  checksum: 6141d05cd68d540a7446dce9490975db
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-05T08:19:58Z
  date_updated: 2024-08-05T08:19:58Z
  file_id: '17386'
  file_name: 2024_JourApplPhysics_Lenton.pdf
  file_size: 2537502
  relation: main_file
  success: 1
file_date_updated: 2024-08-05T08:19:58Z
has_accepted_license: '1'
intvolume: '       136'
isi: 1
issue: '4'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 0aa60e99-070f-11eb-9043-a6de6bdc3afa
  call_identifier: H2020
  grant_number: '949120'
  name: 'Tribocharge: a multi-scale approach to an enduring problem in physics'
publication: Journal of Applied Physics
publication_identifier:
  eissn:
  - 1089-7550
  issn:
  - 0021-8979
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Beyond the blur: Using experimentally determined point spread functions to
  improve scanning Kelvin probe imaging'
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 136
year: '2024'
...
---
_id: '17374'
abstract:
- lang: eng
  text: Achieving photorealistic 3D view synthesis and relighting of human portraits
    is pivotal for advancing AR/VR applications. Existing methodologies in portrait
    relighting demonstrate substantial limitations in terms of generalization and
    3D consistency, coupled with inaccuracies in physically realistic lighting and
    identity preservation. Furthermore, personalization from a single view is difficult
    to achieve and often requires multiview images during the testing phase or involves
    slow optimization processes. This paper introduces Lite2Relight , a novel technique
    that can predict 3D consistent head poses of portraits while performing physically
    plausible light editing at interactive speed. Our method uniquely extends the
    generative capabilities and efficient volumetric representation of EG3D, leveraging
    a lightstage dataset to implicitly disentangle face reflectance and perform relighting
    under target HDRI environment maps. By utilizing a pre-trained geometry-aware
    encoder and a feature alignment module, we map input images into a relightable
    3D space, enhancing them with a strong face geometry and reflectance prior. Through
    extensive quantitative and qualitative evaluations, we show that our method outperforms
    the state-of-the-art methods in terms of efficacy, photorealism, and practical
    application. This includes producing 3D-consistent results of the full head, including
    hair, eyes, and expressions. Lite2Relight paves the way for large-scale adoption
    of photorealistic portrait editing in various domains, offering a robust, interactive
    solution to a previously constrained problem.
acknowledgement: This work was supported by the ERC Consolidator Grant 4DReply (770784).
  We extend our gratitude to Shrisha Bharadwaj for providing feedback and constant
  support.
article_number: '41'
article_processing_charge: Yes (in subscription journal)
arxiv: 1
author:
- first_name: Pramod
  full_name: Rao, Pramod
  last_name: Rao
- first_name: Gereon
  full_name: Fox, Gereon
  last_name: Fox
- first_name: Abhimitra
  full_name: Meka, Abhimitra
  last_name: Meka
- first_name: B. R.
  full_name: Mallikarjun, B. R.
  last_name: Mallikarjun
- first_name: Fangneng
  full_name: Zhan, Fangneng
  last_name: Zhan
- first_name: Tim
  full_name: Weyrich, Tim
  last_name: Weyrich
- first_name: Bernd
  full_name: Bickel, Bernd
  id: 49876194-F248-11E8-B48F-1D18A9856A87
  last_name: Bickel
  orcid: 0000-0001-6511-9385
- first_name: Hanspeter
  full_name: Pfister, Hanspeter
  last_name: Pfister
- first_name: Wojciech
  full_name: Matusik, Wojciech
  last_name: Matusik
- first_name: Mohamed
  full_name: Elgharib, Mohamed
  last_name: Elgharib
- first_name: Christian
  full_name: Theobalt, Christian
  last_name: Theobalt
citation:
  ama: 'Rao P, Fox G, Meka A, et al. Lite2Relight: 3D-aware single image portrait
    relighting. In: <i>Proceedings - SIGGRAPH 2024 Conference Papers</i>. Association
    for Computing Machinery; 2024. doi:<a href="https://doi.org/10.1145/3641519.3657470">10.1145/3641519.3657470</a>'
  apa: 'Rao, P., Fox, G., Meka, A., Mallikarjun, B. R., Zhan, F., Weyrich, T., … Theobalt,
    C. (2024). Lite2Relight: 3D-aware single image portrait relighting. In <i>Proceedings
    - SIGGRAPH 2024 Conference Papers</i>. Denver, CO, United States: Association
    for Computing Machinery. <a href="https://doi.org/10.1145/3641519.3657470">https://doi.org/10.1145/3641519.3657470</a>'
  chicago: 'Rao, Pramod, Gereon Fox, Abhimitra Meka, B. R. Mallikarjun, Fangneng Zhan,
    Tim Weyrich, Bernd Bickel, et al. “Lite2Relight: 3D-Aware Single Image Portrait
    Relighting.” In <i>Proceedings - SIGGRAPH 2024 Conference Papers</i>. Association
    for Computing Machinery, 2024. <a href="https://doi.org/10.1145/3641519.3657470">https://doi.org/10.1145/3641519.3657470</a>.'
  ieee: 'P. Rao <i>et al.</i>, “Lite2Relight: 3D-aware single image portrait relighting,”
    in <i>Proceedings - SIGGRAPH 2024 Conference Papers</i>, Denver, CO, United States,
    2024.'
  ista: 'Rao P, Fox G, Meka A, Mallikarjun BR, Zhan F, Weyrich T, Bickel B, Pfister
    H, Matusik W, Elgharib M, Theobalt C. 2024. Lite2Relight: 3D-aware single image
    portrait relighting. Proceedings - SIGGRAPH 2024 Conference Papers. SIGGRAPH:
    Computer Graphics and Interactive Techniques Conference, 41.'
  mla: 'Rao, Pramod, et al. “Lite2Relight: 3D-Aware Single Image Portrait Relighting.”
    <i>Proceedings - SIGGRAPH 2024 Conference Papers</i>, 41, Association for Computing
    Machinery, 2024, doi:<a href="https://doi.org/10.1145/3641519.3657470">10.1145/3641519.3657470</a>.'
  short: P. Rao, G. Fox, A. Meka, B.R. Mallikarjun, F. Zhan, T. Weyrich, B. Bickel,
    H. Pfister, W. Matusik, M. Elgharib, C. Theobalt, in:, Proceedings - SIGGRAPH
    2024 Conference Papers, Association for Computing Machinery, 2024.
conference:
  end_date: 2024-08-01
  location: Denver, CO, United States
  name: 'SIGGRAPH: Computer Graphics and Interactive Techniques Conference'
  start_date: 2024-07-27
date_created: 2024-08-04T22:01:21Z
date_published: 2024-07-13T00:00:00Z
date_updated: 2025-09-08T08:48:22Z
day: '13'
ddc:
- '000'
department:
- _id: BeBi
doi: 10.1145/3641519.3657470
external_id:
  arxiv:
  - '2407.10487'
  isi:
  - '001282218200076'
file:
- access_level: open_access
  checksum: 4650f6d1419e675929133e46a91ca177
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-05T08:25:18Z
  date_updated: 2024-08-05T08:25:18Z
  file_id: '17387'
  file_name: 2024_SIGGRAPH_Rao.pdf
  file_size: 59683257
  relation: main_file
  success: 1
file_date_updated: 2024-08-05T08:25:18Z
has_accepted_license: '1'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
publication: Proceedings - SIGGRAPH 2024 Conference Papers
publication_identifier:
  isbn:
  - '9798400705250'
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Lite2Relight: 3D-aware single image portrait relighting'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
year: '2024'
...
---
_id: '17375'
abstract:
- lang: eng
  text: We consider the spectral radius of a large random matrix X with independent,
    identically distributed entries. We show that its typical size is given by a precise
    three-term asymptotics with an optimal error term beyond the radius of the celebrated
    circular law. The coefficients in this asymptotics are universal but they differ
    from a similar asymptotics recently proved for the rightmost eigenvalue of X in
    Cipolloni et al., Ann. Probab. 51(6), 2192–2242 (2023). To access the more complicated
    spectral radius, we need to establish a new decorrelation mechanism for the low-lying
    singular values of X − z for different complex shift parameters z using the Dyson
    Brownian Motion.
acknowledgement: L.E. and Y.X. were supported by the ERC Advanced Grant “RMTBeyond”
  Grant No. 101020331.
article_number: '063302'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Giorgio
  full_name: Cipolloni, Giorgio
  id: 42198EFA-F248-11E8-B48F-1D18A9856A87
  last_name: Cipolloni
  orcid: 0000-0002-4901-7992
- first_name: László
  full_name: Erdös, László
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: Yuanyuan
  full_name: Xu, Yuanyuan
  id: 7902bdb1-a2a4-11eb-a164-c9216f71aea3
  last_name: Xu
  orcid: 0000-0003-1559-1205
citation:
  ama: Cipolloni G, Erdös L, Xu Y. Precise asymptotics for the spectral radius of
    a large random matrix. <i>Journal of Mathematical Physics</i>. 2024;65(6). doi:<a
    href="https://doi.org/10.1063/5.0209705">10.1063/5.0209705</a>
  apa: Cipolloni, G., Erdös, L., &#38; Xu, Y. (2024). Precise asymptotics for the
    spectral radius of a large random matrix. <i>Journal of Mathematical Physics</i>.
    AIP Publishing. <a href="https://doi.org/10.1063/5.0209705">https://doi.org/10.1063/5.0209705</a>
  chicago: Cipolloni, Giorgio, László Erdös, and Yuanyuan Xu. “Precise Asymptotics
    for the Spectral Radius of a Large Random Matrix.” <i>Journal of Mathematical
    Physics</i>. AIP Publishing, 2024. <a href="https://doi.org/10.1063/5.0209705">https://doi.org/10.1063/5.0209705</a>.
  ieee: G. Cipolloni, L. Erdös, and Y. Xu, “Precise asymptotics for the spectral radius
    of a large random matrix,” <i>Journal of Mathematical Physics</i>, vol. 65, no.
    6. AIP Publishing, 2024.
  ista: Cipolloni G, Erdös L, Xu Y. 2024. Precise asymptotics for the spectral radius
    of a large random matrix. Journal of Mathematical Physics. 65(6), 063302.
  mla: Cipolloni, Giorgio, et al. “Precise Asymptotics for the Spectral Radius of
    a Large Random Matrix.” <i>Journal of Mathematical Physics</i>, vol. 65, no. 6,
    063302, AIP Publishing, 2024, doi:<a href="https://doi.org/10.1063/5.0209705">10.1063/5.0209705</a>.
  short: G. Cipolloni, L. Erdös, Y. Xu, Journal of Mathematical Physics 65 (2024).
corr_author: '1'
date_created: 2024-08-04T22:01:22Z
date_published: 2024-06-01T00:00:00Z
date_updated: 2025-09-08T08:44:57Z
day: '01'
department:
- _id: LaEr
doi: 10.1063/5.0209705
ec_funded: 1
external_id:
  arxiv:
  - '2210.15643'
  isi:
  - '001252240700002'
intvolume: '        65'
isi: 1
issue: '6'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2210.15643
month: '06'
oa: 1
oa_version: Preprint
project:
- _id: 62796744-2b32-11ec-9570-940b20777f1d
  call_identifier: H2020
  grant_number: '101020331'
  name: Random matrices beyond Wigner-Dyson-Mehta
publication: Journal of Mathematical Physics
publication_identifier:
  issn:
  - 0022-2488
publication_status: published
publisher: AIP Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: Precise asymptotics for the spectral radius of a large random matrix
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 65
year: '2024'
...
---
OA_place: publisher
OA_type: hybrid
_id: '17376'
abstract:
- lang: eng
  text: "The inertia bound and ratio bound (also known as the Cvetković bound and
    Hoffman bound) are two fundamental inequalities in spectral graph theory, giving
    upper bounds on the independence number α(G) of a graph G in terms of spectral
    information about a weighted adjacency matrix of G. For both inequalities, given
    a graph G, one needs to make a judicious choice of weighted adjacency matrix to
    obtain as strong a bound as possible.\r\nWhile there is a well-established theory
    surrounding the ratio bound, the inertia bound is much more mysterious, and its
    limits are rather unclear. In fact, only recently did Sinkovic find the first
    example of a graph for which the inertia bound is not tight (for any weighted
    adjacency matrix), answering a longstanding question of Godsil. We show that the
    inertia bound can be extremely far from tight, and in fact can significantly underperform
    the ratio bound: for example, one of our results is that for infinitely many n,
    there is an n-vertex graph for which even the unweighted ratio bound can prove
    α(G)≤4n3/4, but the inertia bound is always at least n/4. In particular, these
    results address questions of Rooney, Sinkovic, and Wocjan--Elphick--Abiad."
acknowledgement: "The authors are grateful to Noga Alon, Anurag Bishnoi, Clive Elphick,
  and Ferdinand Ihringer for helpful comments and interesting discussions on earlier
  drafts of this paper. Matthew Kwan is supported by ERC Starting Grant “RANDSTRUCT”
  No. 101076777. Yuval Wigderson is supported by Dr. Max Rössler, the Walter Haefner
  Foundation, and the ETH Zürich Foundation.\r\nOpen access funding provided by Eidgenossische
  Technische Hochschule Zurich."
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
- first_name: Yuval
  full_name: Wigderson, Yuval
  last_name: Wigderson
citation:
  ama: Kwan MA, Wigderson Y. The inertia bound is far from tight. <i>Bulletin of the
    London Mathematical Society</i>. 2024;56(10):3196-3208. doi:<a href="https://doi.org/10.1112/blms.13127">10.1112/blms.13127</a>
  apa: Kwan, M. A., &#38; Wigderson, Y. (2024). The inertia bound is far from tight.
    <i>Bulletin of the London Mathematical Society</i>. London Mathematical Society.
    <a href="https://doi.org/10.1112/blms.13127">https://doi.org/10.1112/blms.13127</a>
  chicago: Kwan, Matthew Alan, and Yuval Wigderson. “The Inertia Bound Is Far from
    Tight.” <i>Bulletin of the London Mathematical Society</i>. London Mathematical
    Society, 2024. <a href="https://doi.org/10.1112/blms.13127">https://doi.org/10.1112/blms.13127</a>.
  ieee: M. A. Kwan and Y. Wigderson, “The inertia bound is far from tight,” <i>Bulletin
    of the London Mathematical Society</i>, vol. 56, no. 10. London Mathematical Society,
    pp. 3196–3208, 2024.
  ista: Kwan MA, Wigderson Y. 2024. The inertia bound is far from tight. Bulletin
    of the London Mathematical Society. 56(10), 3196–3208.
  mla: Kwan, Matthew Alan, and Yuval Wigderson. “The Inertia Bound Is Far from Tight.”
    <i>Bulletin of the London Mathematical Society</i>, vol. 56, no. 10, London Mathematical
    Society, 2024, pp. 3196–208, doi:<a href="https://doi.org/10.1112/blms.13127">10.1112/blms.13127</a>.
  short: M.A. Kwan, Y. Wigderson, Bulletin of the London Mathematical Society 56 (2024)
    3196–3208.
date_created: 2024-08-04T22:01:22Z
date_published: 2024-10-01T00:00:00Z
date_updated: 2025-09-08T08:45:39Z
day: '01'
ddc:
- '510'
department:
- _id: MaKw
doi: 10.1112/blms.13127
external_id:
  arxiv:
  - '2312.04925'
  isi:
  - '001279563300001'
file:
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  checksum: 7117f9819eaeb45eef1b0a226f9c2709
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  creator: dernst
  date_created: 2025-01-09T13:36:53Z
  date_updated: 2025-01-09T13:36:53Z
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intvolume: '        56'
isi: 1
issue: '10'
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: 3196-3208
project:
- _id: bd95085b-d553-11ed-ba76-e55d3349be45
  grant_number: '101076777'
  name: Randomness and structure in combinatorics
publication: Bulletin of the London Mathematical Society
publication_identifier:
  eissn:
  - 1469-2120
  issn:
  - 0024-6093
publication_status: published
publisher: London Mathematical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: The inertia bound is far from tight
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 56
year: '2024'
...
---
OA_place: repository
OA_type: green
_id: '17377'
abstract:
- lang: eng
  text: "Lateral root (LR) formation, that is vital for plant development, is one
    of many auxin-modulated processes, but the underlying regulatory mechanism is
    not yet fully known. Recently, \r\nGonzález-García et al. discovered the BiAux
    compound and showed that it is involved in LR development via regulating specific
    auxin coreceptors."
acknowledgement: "This work was supported by funding from the National Science Centre,
  Poland, under the OPUS call in the Weave program and the Austrian Science Fund,
  Austria project (FWF)/OPUS – Peptide receptor complexes for auxin canalization and
  regeneration in Arabidopsis (grant \r\n2021/43/I/NZ1/01835) to E.M., and grant I
  6123-B to J.F."
article_processing_charge: No
article_type: original
author:
- first_name: Barbara
  full_name: Wójcikowska, Barbara
  last_name: Wójcikowska
- first_name: Jiří
  full_name: Friml, Jiří
  id: 4159519E-F248-11E8-B48F-1D18A9856A87
  last_name: Friml
  orcid: 0000-0002-8302-7596
- first_name: Ewa
  full_name: Mazur, Ewa
  last_name: Mazur
citation:
  ama: Wójcikowska B, Friml J, Mazur E. BiAux, a newly discovered compound triggering
    auxin signaling. <i>Trends in Plant Science</i>. 2024;29(12):1279-1281. doi:<a
    href="https://doi.org/10.1016/j.tplants.2024.07.008">10.1016/j.tplants.2024.07.008</a>
  apa: Wójcikowska, B., Friml, J., &#38; Mazur, E. (2024). BiAux, a newly discovered
    compound triggering auxin signaling. <i>Trends in Plant Science</i>. Elsevier.
    <a href="https://doi.org/10.1016/j.tplants.2024.07.008">https://doi.org/10.1016/j.tplants.2024.07.008</a>
  chicago: Wójcikowska, Barbara, Jiří Friml, and Ewa Mazur. “BiAux, a Newly Discovered
    Compound Triggering Auxin Signaling.” <i>Trends in Plant Science</i>. Elsevier,
    2024. <a href="https://doi.org/10.1016/j.tplants.2024.07.008">https://doi.org/10.1016/j.tplants.2024.07.008</a>.
  ieee: B. Wójcikowska, J. Friml, and E. Mazur, “BiAux, a newly discovered compound
    triggering auxin signaling,” <i>Trends in Plant Science</i>, vol. 29, no. 12.
    Elsevier, pp. 1279–1281, 2024.
  ista: Wójcikowska B, Friml J, Mazur E. 2024. BiAux, a newly discovered compound
    triggering auxin signaling. Trends in Plant Science. 29(12), 1279–1281.
  mla: Wójcikowska, Barbara, et al. “BiAux, a Newly Discovered Compound Triggering
    Auxin Signaling.” <i>Trends in Plant Science</i>, vol. 29, no. 12, Elsevier, 2024,
    pp. 1279–81, doi:<a href="https://doi.org/10.1016/j.tplants.2024.07.008">10.1016/j.tplants.2024.07.008</a>.
  short: B. Wójcikowska, J. Friml, E. Mazur, Trends in Plant Science 29 (2024) 1279–1281.
corr_author: '1'
date_created: 2024-08-04T22:01:22Z
date_published: 2024-12-01T00:00:00Z
date_updated: 2025-11-24T15:13:16Z
day: '01'
ddc:
- '580'
department:
- _id: JiFr
doi: 10.1016/j.tplants.2024.07.008
external_id:
  isi:
  - '001375335200001'
  pmid:
  - '39079770'
file:
- access_level: open_access
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  file_id: '20691'
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file_date_updated: 2025-11-24T15:12:50Z
has_accepted_license: '1'
intvolume: '        29'
isi: 1
issue: '12'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Submitted Version
page: 1279-1281
pmid: 1
project:
- _id: bd76d395-d553-11ed-ba76-f678c14f9033
  grant_number: I06123
  name: Peptide receptors for auxin canalization in Arabidopsis
publication: Trends in Plant Science
publication_identifier:
  issn:
  - 1360-1385
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: BiAux, a newly discovered compound triggering auxin signaling
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 29
year: '2024'
...
---
_id: '17389'
abstract:
- lang: eng
  text: The potential of Si and SiGe-based devices for the scaling of quantum circuits
    is tainted by device variability. Each device needs to be tuned to operation conditions
    and each device realisation requires a different tuning protocol. We demonstrate
    that it is possible to automate the tuning of a 4-gate Si FinFET, a 5-gate GeSi
    nanowire and a 7-gate Ge/SiGe heterostructure double quantum dot device from scratch
    with the same algorithm. We achieve tuning times of 30, 10, and 92 min, respectively.
    The algorithm also provides insight into the parameter space landscape for each
    of these devices, allowing for the characterization of the regions where double
    quantum dot regimes are found. These results show that overarching solutions for
    the tuning of quantum devices are enabled by machine learning.
acknowledged_ssus:
- _id: NanoFab
acknowledgement: We acknowledge Ang Li, Erik P. A. M. Bakkers (University of Eindhoven)
  for the fabrication of the Ge/Si nanowire. This work was supported by the Royal
  Society, the EPSRC National Quantum Technology Hub in Networked Quantum Information
  Technology (EP/M013243/1), Quantum Technology Capital (EP/N014995/1), EPSRC Platform
  Grant (EP/R029229/1), the European Research Council (Grant agreement 948932), the
  Swiss Nanoscience Institute, the NCCR SPIN, the EU H2020 European Microkelvin Platform
  EMP grant No. 824109, the Scientific Service Units of IST Austria through resources
  provided by the nanofabrication facility, the FWF-I 05060 and the FWF-P 30207 project.
article_number: '17281'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: B.
  full_name: Severin, B.
  last_name: Severin
- first_name: D. T.
  full_name: Lennon, D. T.
  last_name: Lennon
- first_name: L. C.
  full_name: Camenzind, L. C.
  last_name: Camenzind
- first_name: F.
  full_name: Vigneau, F.
  last_name: Vigneau
- first_name: F.
  full_name: Fedele, F.
  last_name: Fedele
- first_name: Daniel
  full_name: Jirovec, Daniel
  id: 4C473F58-F248-11E8-B48F-1D18A9856A87
  last_name: Jirovec
  orcid: 0000-0002-7197-4801
- first_name: A.
  full_name: Ballabio, A.
  last_name: Ballabio
- first_name: D.
  full_name: Chrastina, D.
  last_name: Chrastina
- first_name: G.
  full_name: Isella, G.
  last_name: Isella
- first_name: M.
  full_name: de Kruijf, M.
  last_name: de Kruijf
- first_name: M. J.
  full_name: Carballido, M. J.
  last_name: Carballido
- first_name: S.
  full_name: Svab, S.
  last_name: Svab
- first_name: A. V.
  full_name: Kuhlmann, A. V.
  last_name: Kuhlmann
- first_name: S.
  full_name: Geyer, S.
  last_name: Geyer
- first_name: F. N. M.
  full_name: Froning, F. N. M.
  last_name: Froning
- first_name: H.
  full_name: Moon, H.
  last_name: Moon
- first_name: M. A.
  full_name: Osborne, M. A.
  last_name: Osborne
- first_name: D.
  full_name: Sejdinovic, D.
  last_name: Sejdinovic
- first_name: Georgios
  full_name: Katsaros, Georgios
  id: 38DB5788-F248-11E8-B48F-1D18A9856A87
  last_name: Katsaros
  orcid: 0000-0001-8342-202X
- first_name: D. M.
  full_name: Zumbühl, D. M.
  last_name: Zumbühl
- first_name: G. A. D.
  full_name: Briggs, G. A. D.
  last_name: Briggs
- first_name: N.
  full_name: Ares, N.
  last_name: Ares
citation:
  ama: Severin B, Lennon DT, Camenzind LC, et al. Cross-architecture tuning of silicon
    and SiGe-based quantum devices using machine learning. <i>Scientific Reports</i>.
    2024;14. doi:<a href="https://doi.org/10.1038/s41598-024-67787-z">10.1038/s41598-024-67787-z</a>
  apa: Severin, B., Lennon, D. T., Camenzind, L. C., Vigneau, F., Fedele, F., Jirovec,
    D., … Ares, N. (2024). Cross-architecture tuning of silicon and SiGe-based quantum
    devices using machine learning. <i>Scientific Reports</i>. Springer Nature. <a
    href="https://doi.org/10.1038/s41598-024-67787-z">https://doi.org/10.1038/s41598-024-67787-z</a>
  chicago: Severin, B., D. T. Lennon, L. C. Camenzind, F. Vigneau, F. Fedele, Daniel
    Jirovec, A. Ballabio, et al. “Cross-Architecture Tuning of Silicon and SiGe-Based
    Quantum Devices Using Machine Learning.” <i>Scientific Reports</i>. Springer Nature,
    2024. <a href="https://doi.org/10.1038/s41598-024-67787-z">https://doi.org/10.1038/s41598-024-67787-z</a>.
  ieee: B. Severin <i>et al.</i>, “Cross-architecture tuning of silicon and SiGe-based
    quantum devices using machine learning,” <i>Scientific Reports</i>, vol. 14. Springer
    Nature, 2024.
  ista: Severin B, Lennon DT, Camenzind LC, Vigneau F, Fedele F, Jirovec D, Ballabio
    A, Chrastina D, Isella G, de Kruijf M, Carballido MJ, Svab S, Kuhlmann AV, Geyer
    S, Froning FNM, Moon H, Osborne MA, Sejdinovic D, Katsaros G, Zumbühl DM, Briggs
    GAD, Ares N. 2024. Cross-architecture tuning of silicon and SiGe-based quantum
    devices using machine learning. Scientific Reports. 14, 17281.
  mla: Severin, B., et al. “Cross-Architecture Tuning of Silicon and SiGe-Based Quantum
    Devices Using Machine Learning.” <i>Scientific Reports</i>, vol. 14, 17281, Springer
    Nature, 2024, doi:<a href="https://doi.org/10.1038/s41598-024-67787-z">10.1038/s41598-024-67787-z</a>.
  short: B. Severin, D.T. Lennon, L.C. Camenzind, F. Vigneau, F. Fedele, D. Jirovec,
    A. Ballabio, D. Chrastina, G. Isella, M. de Kruijf, M.J. Carballido, S. Svab,
    A.V. Kuhlmann, S. Geyer, F.N.M. Froning, H. Moon, M.A. Osborne, D. Sejdinovic,
    G. Katsaros, D.M. Zumbühl, G.A.D. Briggs, N. Ares, Scientific Reports 14 (2024).
date_created: 2024-08-05T08:50:51Z
date_published: 2024-07-27T00:00:00Z
date_updated: 2025-09-08T08:49:16Z
day: '27'
ddc:
- '530'
department:
- _id: GeKa
doi: 10.1038/s41598-024-67787-z
external_id:
  arxiv:
  - '2107.12975'
  isi:
  - '001281273100062'
  pmid:
  - '39068242'
file:
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  date_updated: 2024-08-05T08:52:14Z
  file_id: '17390'
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  file_size: 2255741
  relation: main_file
  success: 1
file_date_updated: 2024-08-05T08:52:14Z
has_accepted_license: '1'
intvolume: '        14'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: c0977eea-5a5b-11eb-8a69-a862db0cf4d1
  grant_number: I05060
  name: High impedance circuit quantum electrodynamics with hole spins
- _id: 2641CE5E-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: P30207
  name: Hole spin orbit qubits in Ge quantum wells
publication: Scientific Reports
publication_identifier:
  issn:
  - 2045-2322
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
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scopus_import: '1'
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title: Cross-architecture tuning of silicon and SiGe-based quantum devices using machine
  learning
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 14
year: '2024'
...
---
_id: '17396'
abstract:
- lang: eng
  text: Wildfire intensity and severity have been increasing in the Iberian Peninsula
    in recent years, particularly in the Galicia region, due to rising temperatures
    and accumulating drier combustible vegetation in unmanaged lands. This leads to
    substantial emissions of air pollutants, notably fine particles (PM2.5), posing
    a risk to public health. This study aims to assess the impact of local and regional
    wildfires on PM2.5 levels in Galicia's main cities and their implications for
    air quality and public health. Over a decade (2013–2022), PM2.5 data during wildfire
    seasons were analyzed using statistical methods and Lagrangian tracking to monitor
    smoke plume evolution. The results reveal a notable increase in PM2.5 concentration
    during the wildfire season (June–November) in Galicia, surpassing health guidelines
    during extreme events and posing a significant health risk to the population.
    Regional wildfire analyses indicate that smoke plumes from Northern Portugal contribute
    to pollution in Galician cities, influencing the seasonality of heightened PM2.5
    levels. During extensive wildfires, elevated PM2.5 concentration values persisted
    for several days, potentially exacerbating health concerns in Galicia. These findings
    underscore the urgency of implementing air pollution prevention and management
    measures in the region, including developing effective alerts for large-scale
    events and improved wildfire management strategies to mitigate their impact on
    air quality in Galician cities.
acknowledgement: 'Alejandro Casallas was partially funded by a fellowship from the
  Abdus Salam International Centre for Theoretical Physics – ICTP. This project has
  received funding from the European Union’s Horizon 2020 research and innovation
  programme under the Marie Skłodowska-Curie grant agreement No 101034413 awarded
  to Alejandro Casallas. '
article_number: '122093'
article_processing_charge: Yes (in subscription journal)
article_type: original
author:
- first_name: César
  full_name: Quishpe-Vásquez, César
  last_name: Quishpe-Vásquez
- first_name: Patricia
  full_name: Oliva, Patricia
  last_name: Oliva
- first_name: Ellie Anne
  full_name: López-Barrera, Ellie Anne
  last_name: López-Barrera
- first_name: Alejandro
  full_name: Casallas Garcia, Alejandro
  id: 92081129-2d75-11ef-a48d-b04dd7a2385a
  last_name: Casallas Garcia
  orcid: 0000-0002-1988-5035
citation:
  ama: Quishpe-Vásquez C, Oliva P, López-Barrera EA, Casallas Garcia A. Wildfires
    impact on PM2.5 concentration in galicia Spain. <i>Journal of Environmental Management</i>.
    2024;367. doi:<a href="https://doi.org/10.1016/j.jenvman.2024.122093">10.1016/j.jenvman.2024.122093</a>
  apa: Quishpe-Vásquez, C., Oliva, P., López-Barrera, E. A., &#38; Casallas Garcia,
    A. (2024). Wildfires impact on PM2.5 concentration in galicia Spain. <i>Journal
    of Environmental Management</i>. Elsevier. <a href="https://doi.org/10.1016/j.jenvman.2024.122093">https://doi.org/10.1016/j.jenvman.2024.122093</a>
  chicago: Quishpe-Vásquez, César, Patricia Oliva, Ellie Anne López-Barrera, and Alejandro
    Casallas Garcia. “Wildfires Impact on PM2.5 Concentration in Galicia Spain.” <i>Journal
    of Environmental Management</i>. Elsevier, 2024. <a href="https://doi.org/10.1016/j.jenvman.2024.122093">https://doi.org/10.1016/j.jenvman.2024.122093</a>.
  ieee: C. Quishpe-Vásquez, P. Oliva, E. A. López-Barrera, and A. Casallas Garcia,
    “Wildfires impact on PM2.5 concentration in galicia Spain,” <i>Journal of Environmental
    Management</i>, vol. 367. Elsevier, 2024.
  ista: Quishpe-Vásquez C, Oliva P, López-Barrera EA, Casallas Garcia A. 2024. Wildfires
    impact on PM2.5 concentration in galicia Spain. Journal of Environmental Management.
    367, 122093.
  mla: Quishpe-Vásquez, César, et al. “Wildfires Impact on PM2.5 Concentration in
    Galicia Spain.” <i>Journal of Environmental Management</i>, vol. 367, 122093,
    Elsevier, 2024, doi:<a href="https://doi.org/10.1016/j.jenvman.2024.122093">10.1016/j.jenvman.2024.122093</a>.
  short: C. Quishpe-Vásquez, P. Oliva, E.A. López-Barrera, A. Casallas Garcia, Journal
    of Environmental Management 367 (2024).
date_created: 2024-08-06T05:54:52Z
date_published: 2024-09-01T00:00:00Z
date_updated: 2025-09-08T08:53:10Z
day: '01'
ddc:
- '550'
department:
- _id: CaMu
doi: 10.1016/j.jenvman.2024.122093
ec_funded: 1
external_id:
  isi:
  - '001289532100001'
  pmid:
  - '39106804'
file:
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  checksum: 6fa476a4c08aded413844d92336b0e52
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  creator: acasalla
  date_created: 2024-08-09T13:37:23Z
  date_updated: 2024-08-09T13:37:23Z
  file_id: '17405'
  file_name: Fires_Galicia_SM.pdf
  file_size: 1595118
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  content_type: application/pdf
  creator: acasalla
  date_created: 2024-08-09T13:37:24Z
  date_updated: 2024-08-09T13:37:24Z
  file_id: '17406'
  file_name: Fires_Galicia.pdf
  file_size: 13662676
  relation: main_file
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file_date_updated: 2024-08-09T13:37:24Z
has_accepted_license: '1'
intvolume: '       367'
isi: 1
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: Journal of Environmental Management
publication_identifier:
  issn:
  - 0301-4797
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Wildfires impact on PM2.5 concentration in galicia Spain
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 367
year: '2024'
...
---
_id: '17402'
abstract:
- lang: eng
  text: We present version 2.0 of the Partial Exploration Tool (PET), a tool for verification
    of probabilistic systems. We extend the previous version by adding support for
    stochastic games, based on a recent unified framework for sound value iteration
    algorithms. Thereby, PET2 is the first tool implementing a sound and efficient
    approach for solving stochastic games with objectives of the type reachability/safety
    and mean payoff. We complement this approach by developing and implementing a
    partial-exploration based variant for all three objectives. Our experimental evaluation
    shows that PET2 offers the most efficient partial-exploration based algorithm
    and is the most viable tool on SGs, even outperforming unsound tools.
acknowledgement: M. Weininger has received funding from the EU’s Horizon 2020 research
  and innovation programme under the Marie Skłodowska-Curie grant agreement No. 101034413.
alternative_title:
- LNCS
article_processing_charge: Yes (in subscription journal)
arxiv: 1
author:
- first_name: Tobias
  full_name: Meggendorfer, Tobias
  id: b21b0c15-30a2-11eb-80dc-f13ca25802e1
  last_name: Meggendorfer
  orcid: 0000-0002-1712-2165
- first_name: Maximilian
  full_name: Weininger, Maximilian
  id: 02ab0197-cc70-11ed-ab61-918e71f56881
  last_name: Weininger
citation:
  ama: 'Meggendorfer T, Weininger M. Playing games with your PET: Extending the Partial
    Exploration Tool to stochastic games. In: <i>36th International Conference on
    Computer Aided Verification</i>. Vol 14683. Springer Nature; 2024:359-372. doi:<a
    href="https://doi.org/10.1007/978-3-031-65633-0_16">10.1007/978-3-031-65633-0_16</a>'
  apa: 'Meggendorfer, T., &#38; Weininger, M. (2024). Playing games with your PET:
    Extending the Partial Exploration Tool to stochastic games. In <i>36th International
    Conference on Computer Aided Verification</i> (Vol. 14683, pp. 359–372). Montreal,
    Canada: Springer Nature. <a href="https://doi.org/10.1007/978-3-031-65633-0_16">https://doi.org/10.1007/978-3-031-65633-0_16</a>'
  chicago: 'Meggendorfer, Tobias, and Maximilian Weininger. “Playing Games with Your
    PET: Extending the Partial Exploration Tool to Stochastic Games.” In <i>36th International
    Conference on Computer Aided Verification</i>, 14683:359–72. Springer Nature,
    2024. <a href="https://doi.org/10.1007/978-3-031-65633-0_16">https://doi.org/10.1007/978-3-031-65633-0_16</a>.'
  ieee: 'T. Meggendorfer and M. Weininger, “Playing games with your PET: Extending
    the Partial Exploration Tool to stochastic games,” in <i>36th International Conference
    on Computer Aided Verification</i>, Montreal, Canada, 2024, vol. 14683, pp. 359–372.'
  ista: 'Meggendorfer T, Weininger M. 2024. Playing games with your PET: Extending
    the Partial Exploration Tool to stochastic games. 36th International Conference
    on Computer Aided Verification. CAV: Computer Aided Verification, LNCS, vol. 14683,
    359–372.'
  mla: 'Meggendorfer, Tobias, and Maximilian Weininger. “Playing Games with Your PET:
    Extending the Partial Exploration Tool to Stochastic Games.” <i>36th International
    Conference on Computer Aided Verification</i>, vol. 14683, Springer Nature, 2024,
    pp. 359–72, doi:<a href="https://doi.org/10.1007/978-3-031-65633-0_16">10.1007/978-3-031-65633-0_16</a>.'
  short: T. Meggendorfer, M. Weininger, in:, 36th International Conference on Computer
    Aided Verification, Springer Nature, 2024, pp. 359–372.
conference:
  end_date: 2024-07-27
  location: Montreal, Canada
  name: 'CAV: Computer Aided Verification'
  start_date: 2024-07-24
corr_author: '1'
date_created: 2024-08-09T11:24:54Z
date_published: 2024-07-01T00:00:00Z
date_updated: 2025-09-08T08:53:55Z
day: '01'
ddc:
- '000'
department:
- _id: KrCh
doi: 10.1007/978-3-031-65633-0_16
ec_funded: 1
external_id:
  arxiv:
  - '2405.03885'
  isi:
  - '001307897000016'
file:
- access_level: open_access
  checksum: c888231d0a47b55786b7b4c0f02216bb
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-12T08:39:12Z
  date_updated: 2024-08-12T08:39:12Z
  file_id: '17419'
  file_name: 2024_CAV_Meggendorfer.pdf
  file_size: 368487
  relation: main_file
  success: 1
file_date_updated: 2024-08-12T08:39:12Z
has_accepted_license: '1'
intvolume: '     14683'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 359-372
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: 36th International Conference on Computer Aided Verification
publication_identifier:
  eisbn:
  - '9783031656330'
  eissn:
  - 1611-3349
  isbn:
  - '9783031656323'
  issn:
  - 0302-9743
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Playing games with your PET: Extending the Partial Exploration Tool to stochastic
  games'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: conference
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 14683
year: '2024'
...
---
APC_amount: 3534 EUR
OA_place: publisher
OA_type: gold
_id: '17407'
abstract:
- lang: eng
  text: The ability to control forces between sub-micron-scale building blocks offers
    significant potential for designing new materials through self-assembly. Traditionally,
    this involves identifying a crystal structure with a desired property and then
    designing building-block interactions so that it assembles spontaneously. However,
    this paradigm fails for structurally disordered solids, which lack a well-defined
    structure. Here, we show that disordered solids can still be treated from an inverse
    self-assembly perspective by bypassing structure and directly targeting material
    properties. Using the Poisson’s ratio as a primary example, we demonstrate how
    differentiable programming links interaction parameters with emergent behavior,
    enabling iterative training to achieve the desired Poisson’s ratio. We also tune
    other properties, including pressure and local 8-fold structural order, and can
    even control multiple properties simultaneously. This robust, transferable, and
    scalable approach can handle a wide variety of systems and properties, demonstrating
    the utility of disordered solids as a practical avenue for self-assembly platforms.
acknowledgement: We thank M. Lechner for helpful discussions.
article_number: '141'
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Mengjie
  full_name: Zu, Mengjie
  id: 26dd9e7c-e86a-11eb-a854-82ac731c9ae2
  last_name: Zu
- first_name: Carl Peter
  full_name: Goodrich, Carl Peter
  id: EB352CD2-F68A-11E9-89C5-A432E6697425
  last_name: Goodrich
  orcid: 0000-0002-1307-5074
citation:
  ama: Zu M, Goodrich CP. Designing athermal disordered solids with automatic differentiation.
    <i>Communications Materials</i>. 2024;5. doi:<a href="https://doi.org/10.1038/s43246-024-00583-4">10.1038/s43246-024-00583-4</a>
  apa: Zu, M., &#38; Goodrich, C. P. (2024). Designing athermal disordered solids
    with automatic differentiation. <i>Communications Materials</i>. Springer Nature.
    <a href="https://doi.org/10.1038/s43246-024-00583-4">https://doi.org/10.1038/s43246-024-00583-4</a>
  chicago: Zu, Mengjie, and Carl Peter Goodrich. “Designing Athermal Disordered Solids
    with Automatic Differentiation.” <i>Communications Materials</i>. Springer Nature,
    2024. <a href="https://doi.org/10.1038/s43246-024-00583-4">https://doi.org/10.1038/s43246-024-00583-4</a>.
  ieee: M. Zu and C. P. Goodrich, “Designing athermal disordered solids with automatic
    differentiation,” <i>Communications Materials</i>, vol. 5. Springer Nature, 2024.
  ista: Zu M, Goodrich CP. 2024. Designing athermal disordered solids with automatic
    differentiation. Communications Materials. 5, 141.
  mla: Zu, Mengjie, and Carl Peter Goodrich. “Designing Athermal Disordered Solids
    with Automatic Differentiation.” <i>Communications Materials</i>, vol. 5, 141,
    Springer Nature, 2024, doi:<a href="https://doi.org/10.1038/s43246-024-00583-4">10.1038/s43246-024-00583-4</a>.
  short: M. Zu, C.P. Goodrich, Communications Materials 5 (2024).
corr_author: '1'
date_created: 2024-08-11T22:01:11Z
date_published: 2024-08-01T00:00:00Z
date_updated: 2025-05-08T09:45:35Z
day: '01'
ddc:
- '530'
department:
- _id: CaGo
doi: 10.1038/s43246-024-00583-4
external_id:
  arxiv:
  - '2404.15101'
file:
- access_level: open_access
  checksum: d6f74e242db5f46bb0e380ee23a268af
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-12T07:56:38Z
  date_updated: 2024-08-12T07:56:38Z
  file_id: '17416'
  file_name: 2024_CommMaterials_Zu.pdf
  file_size: 9824134
  relation: main_file
  success: 1
file_date_updated: 2024-08-12T07:56:38Z
has_accepted_license: '1'
intvolume: '         5'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
project:
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
  name: IST Austria Open Access Fund
publication: Communications Materials
publication_identifier:
  eissn:
  - 2662-4443
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Designing athermal disordered solids with automatic differentiation
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2024'
...
---
_id: '17408'
abstract:
- lang: eng
  text: "Background: The remarkable regenerative abilities observed in planarians
    and cnidarians are closely linked to the active proliferation of adult stem cells
    and the precise differentiation of their progeny, both of which typically deteriorate
    during aging in low regenerative animals. While regeneration-specific genes conserved
    in highly regenerative organisms may confer regenerative abilities and long-term
    maintenance of tissue homeostasis, it remains unclear whether introducing these
    regenerative genes into low regenerative animals can improve their regeneration
    and aging processes.\r\n\r\nResults: Here, we ectopically express highly regenerative
    species-specific JmjC domain-encoding genes (HRJDs) in Drosophila, a widely used
    low regenerative model organism. Surprisingly, HRJD expression impedes tissue
    regeneration in the developing wing disc but extends organismal lifespan when
    expressed in the intestinal stem cell lineages of the adult midgut under non-regenerative
    conditions. Notably, HRJDs enhance the proliferative activity of intestinal stem
    cells while maintaining their differentiation fidelity, ameliorating age-related
    decline in gut barrier functions.\r\n\r\nConclusions: These findings together
    suggest that the introduction of highly regenerative species-specific genes can
    improve stem cell functions and promote a healthy lifespan when expressed in aging
    animals."
acknowledgement: "We thank I. Miguel-Aliaga, N. Shinoda, M. Furuse, Y. Izumi, BDSC,
  Kyoto Stock Center, Drosophila Genomics Resource Center (DGRC), and Developmental
  Studies Hybridoma Bank (DSHB) for fly stocks and reagents.\r\nThis work was supported
  by JSPS/MEXT KAKENHI (grant numbers JP22J01430 to H.N., JP21H04774, JP23H04766,
  JP24H00567 to M.M., and JP17H06332, JP22H02762, JP23K18134, JP23H04696 to Y.N.),
  AMED-Aging (JP21gm5010001 to M.M.), AMED-PRIME (JP22gm6110025 to Y.N.), and Sadako
  O. Hirai Ban Award for Young Researchers (H.N.)"
article_number: '157'
article_processing_charge: Yes
article_type: original
author:
- first_name: Hiroki
  full_name: Nagai, Hiroki
  id: 608df3e6-e2ab-11ed-8890-c9318cec7da4
  last_name: Nagai
  orcid: 0000-0003-1671-9434
- first_name: Yuya
  full_name: Adachi, Yuya
  last_name: Adachi
- first_name: Tenki
  full_name: Nakasugi, Tenki
  last_name: Nakasugi
- first_name: Ema
  full_name: Takigawa, Ema
  last_name: Takigawa
- first_name: Junichiro
  full_name: Ui, Junichiro
  last_name: Ui
- first_name: Takashi
  full_name: Makino, Takashi
  last_name: Makino
- first_name: Masayuki
  full_name: Miura, Masayuki
  last_name: Miura
- first_name: Yu Ichiro
  full_name: Nakajima, Yu Ichiro
  last_name: Nakajima
citation:
  ama: NAGAI H, Adachi Y, Nakasugi T, et al. Highly regenerative species-specific
    genes improve age-associated features in the adult Drosophila midgut. <i>BMC Biology</i>.
    2024;22. doi:<a href="https://doi.org/10.1186/s12915-024-01956-4">10.1186/s12915-024-01956-4</a>
  apa: NAGAI, H., Adachi, Y., Nakasugi, T., Takigawa, E., Ui, J., Makino, T., … Nakajima,
    Y. I. (2024). Highly regenerative species-specific genes improve age-associated
    features in the adult Drosophila midgut. <i>BMC Biology</i>. Springer Nature.
    <a href="https://doi.org/10.1186/s12915-024-01956-4">https://doi.org/10.1186/s12915-024-01956-4</a>
  chicago: NAGAI, HIROKI, Yuya Adachi, Tenki Nakasugi, Ema Takigawa, Junichiro Ui,
    Takashi Makino, Masayuki Miura, and Yu Ichiro Nakajima. “Highly Regenerative Species-Specific
    Genes Improve Age-Associated Features in the Adult Drosophila Midgut.” <i>BMC
    Biology</i>. Springer Nature, 2024. <a href="https://doi.org/10.1186/s12915-024-01956-4">https://doi.org/10.1186/s12915-024-01956-4</a>.
  ieee: H. NAGAI <i>et al.</i>, “Highly regenerative species-specific genes improve
    age-associated features in the adult Drosophila midgut,” <i>BMC Biology</i>, vol.
    22. Springer Nature, 2024.
  ista: NAGAI H, Adachi Y, Nakasugi T, Takigawa E, Ui J, Makino T, Miura M, Nakajima
    YI. 2024. Highly regenerative species-specific genes improve age-associated features
    in the adult Drosophila midgut. BMC Biology. 22, 157.
  mla: NAGAI, HIROKI, et al. “Highly Regenerative Species-Specific Genes Improve Age-Associated
    Features in the Adult Drosophila Midgut.” <i>BMC Biology</i>, vol. 22, 157, Springer
    Nature, 2024, doi:<a href="https://doi.org/10.1186/s12915-024-01956-4">10.1186/s12915-024-01956-4</a>.
  short: H. NAGAI, Y. Adachi, T. Nakasugi, E. Takigawa, J. Ui, T. Makino, M. Miura,
    Y.I. Nakajima, BMC Biology 22 (2024).
date_created: 2024-08-11T22:01:11Z
date_published: 2024-08-02T00:00:00Z
date_updated: 2025-09-08T08:51:29Z
day: '02'
ddc:
- '570'
department:
- _id: XiFe
doi: 10.1186/s12915-024-01956-4
external_id:
  isi:
  - '001282893200001'
  pmid:
  - '39090637'
file:
- access_level: open_access
  checksum: 318759626ec83b13f909c82904393ef1
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-12T08:14:44Z
  date_updated: 2024-08-12T08:14:44Z
  file_id: '17417'
  file_name: 2024_BMCBio_Nagai.pdf
  file_size: 3345718
  relation: main_file
  success: 1
file_date_updated: 2024-08-12T08:14:44Z
has_accepted_license: '1'
intvolume: '        22'
isi: 1
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
pmid: 1
publication: BMC Biology
publication_identifier:
  eissn:
  - 1741-7007
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Highly regenerative species-specific genes improve age-associated features
  in the adult Drosophila midgut
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 22
year: '2024'
...
---
DOAJ_listed: '1'
_id: '17409'
abstract:
- lang: eng
  text: Light-driven rotary molecular motors are among the most promising classes
    of responsive molecular machines and take advantage of their intrinsic chirality
    which governs unidirectional rotation. As a consequence of their dynamic function,
    they receive considerable interest in the areas of supramolecular chemistry, asymmetric
    catalysis and responsive materials. Among the emerging classes of responsive photochromic
    molecules, multistate first-generation molecular motors driven by benign visible
    light remain unexplored, which limits the exploitation of the full potential of
    these mechanical light-powered systems. Herein, we describe a series of all-visible-light-driven
    first-generation molecular motors based on the salicylidene Schiff base functionality.
    Remarkable redshifts up to 100 nm in absorption are achieved compared to conventional
    first-generation motor structures. Taking advantage of all-visible-light-driven
    multistate motor scaffolds, adaptive behaviour is found as well, and potential
    application in multistate photoluminescence is demonstrated. These functional
    visible-light-responsive motors will likely stimulate the design and synthesis
    of more sophisticated nanomachinery with a myriad of future applications in powering
    dynamic systems.
acknowledgement: Financial support from the Netherlands Organization for Scientific
  Research (NWO-CW), the Dutch Ministry of Education, Culture and Science (Gravitation
  program No.024.001.035), the China Scholarship Council (CSC PhD Fellowship No.201808330459
  to J. S.). We thank Dr. Youxin Fu, Dr. Alexander Ryabchun, Dr. Wojciech Danowski,
  Dr. Jianyu Zhang and Yahan Shan from University of Groningen for their help to this
  project and fruitful discussions.
article_number: '6461'
article_processing_charge: Yes
article_type: original
author:
- first_name: Sven
  full_name: Van Vliet, Sven
  last_name: Van Vliet
- first_name: Jinyu
  full_name: Sheng, Jinyu
  id: 639f0526-27c9-11ee-95a6-966cd7f102d8
  last_name: Sheng
- first_name: Charlotte N.
  full_name: Stindt, Charlotte N.
  last_name: Stindt
- first_name: Ben L.
  full_name: Feringa, Ben L.
  last_name: Feringa
citation:
  ama: Van Vliet S, Sheng J, Stindt CN, Feringa BL. All-visible-light-driven salicylidene
    schiff-base-functionalized artificial molecular motors. <i>Nature Communications</i>.
    2024;15. doi:<a href="https://doi.org/10.1038/s41467-024-50587-4">10.1038/s41467-024-50587-4</a>
  apa: Van Vliet, S., Sheng, J., Stindt, C. N., &#38; Feringa, B. L. (2024). All-visible-light-driven
    salicylidene schiff-base-functionalized artificial molecular motors. <i>Nature
    Communications</i>. Springer Nature. <a href="https://doi.org/10.1038/s41467-024-50587-4">https://doi.org/10.1038/s41467-024-50587-4</a>
  chicago: Van Vliet, Sven, Jinyu Sheng, Charlotte N. Stindt, and Ben L. Feringa.
    “All-Visible-Light-Driven Salicylidene Schiff-Base-Functionalized Artificial Molecular
    Motors.” <i>Nature Communications</i>. Springer Nature, 2024. <a href="https://doi.org/10.1038/s41467-024-50587-4">https://doi.org/10.1038/s41467-024-50587-4</a>.
  ieee: S. Van Vliet, J. Sheng, C. N. Stindt, and B. L. Feringa, “All-visible-light-driven
    salicylidene schiff-base-functionalized artificial molecular motors,” <i>Nature
    Communications</i>, vol. 15. Springer Nature, 2024.
  ista: Van Vliet S, Sheng J, Stindt CN, Feringa BL. 2024. All-visible-light-driven
    salicylidene schiff-base-functionalized artificial molecular motors. Nature Communications.
    15, 6461.
  mla: Van Vliet, Sven, et al. “All-Visible-Light-Driven Salicylidene Schiff-Base-Functionalized
    Artificial Molecular Motors.” <i>Nature Communications</i>, vol. 15, 6461, Springer
    Nature, 2024, doi:<a href="https://doi.org/10.1038/s41467-024-50587-4">10.1038/s41467-024-50587-4</a>.
  short: S. Van Vliet, J. Sheng, C.N. Stindt, B.L. Feringa, Nature Communications
    15 (2024).
date_created: 2024-08-11T22:01:11Z
date_published: 2024-07-31T00:00:00Z
date_updated: 2025-09-08T08:52:15Z
day: '31'
ddc:
- '540'
department:
- _id: RaKl
doi: 10.1038/s41467-024-50587-4
external_id:
  isi:
  - '001282384300020'
  pmid:
  - '39085193'
file:
- access_level: open_access
  checksum: 4aca2ea30fe529947cb2f4c7fc2af2df
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-12T08:23:10Z
  date_updated: 2024-08-12T08:23:10Z
  file_id: '17418'
  file_name: 2024_NatureComm_vanVliet.pdf
  file_size: 1355696
  relation: main_file
  success: 1
file_date_updated: 2024-08-12T08:23:10Z
has_accepted_license: '1'
intvolume: '        15'
isi: 1
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
pmid: 1
publication: Nature Communications
publication_identifier:
  eissn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: All-visible-light-driven salicylidene schiff-base-functionalized artificial
  molecular motors
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 15
year: '2024'
...
---
_id: '17410'
abstract:
- lang: eng
  text: We present a cavity-electromechanical system comprising a superconducting
    quantum interference device which is embedded in a microwave resonator and coupled
    via a pickup loop to a 6-μ⁢g magnetically levitated superconducting sphere. The
    motion of the sphere in the magnetic trap induces a frequency shift in the SQUID-cavity
    system. We use microwave spectroscopy to characterize the system, and we demonstrate
    that the electromechanical interaction is tunable. The measured displacement sensitivity
    of 10−7m/√Hz defines a path towards ground-state cooling of levitated particles
    with Planck-scale masses at millikelvin environment temperatures.
acknowledgement: We gratefully acknowledge valuable discussions with Uros Delic, Lorenzo
  Magrini, and Corentin Gut. This work was supported by the European Union’s Horizon
  2020 research and innovation program under Grant No. 863132 (iQLev) and No. 101080143
  (SuperMeQ), the European Research Council under Grant No. 951234 (ERC Synergy QXtreme),
  the Austrian and Bavarian Academy of Sciences (Topical Team SGQ), the Alexander
  von Humboldt Foundation through a Feodor Lynen Fellowship (P.S.), the Swedish Research
  Council under Grant No. 2020-00381 (G.H.), and the Deutsche Forschungsgemeinschaft
  (DFG, German Research Foundation) via Germany’s Excellence Strategy EXC-2111-390814868
  (H.H., R.G.).
article_number: '014078'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Philip
  full_name: Schmidt, Philip
  last_name: Schmidt
- first_name: Remi
  full_name: Claessen, Remi
  last_name: Claessen
- first_name: Gerard
  full_name: Higgins, Gerard
  last_name: Higgins
- first_name: Joachim
  full_name: Hofer, Joachim
  last_name: Hofer
- first_name: Jannek J.
  full_name: Hansen, Jannek J.
  last_name: Hansen
- first_name: Peter
  full_name: Asenbaum, Peter
  last_name: Asenbaum
- first_name: Martin
  full_name: Zemlicka, Martin
  id: 2DCF8DE6-F248-11E8-B48F-1D18A9856A87
  last_name: Zemlicka
- first_name: Kevin
  full_name: Uhl, Kevin
  last_name: Uhl
- first_name: Reinhold
  full_name: Kleiner, Reinhold
  last_name: Kleiner
- first_name: Rudolf
  full_name: Gross, Rudolf
  last_name: Gross
- first_name: Hans
  full_name: Huebl, Hans
  last_name: Huebl
- first_name: Michael
  full_name: Trupke, Michael
  last_name: Trupke
- first_name: Markus
  full_name: Aspelmeyer, Markus
  last_name: Aspelmeyer
citation:
  ama: Schmidt P, Claessen R, Higgins G, et al. Remote sensing of a levitated superconductor
    with a flux-tunable microwave cavity. <i>Physical Review Applied</i>. 2024;22.
    doi:<a href="https://doi.org/10.1103/PhysRevApplied.22.014078">10.1103/PhysRevApplied.22.014078</a>
  apa: Schmidt, P., Claessen, R., Higgins, G., Hofer, J., Hansen, J. J., Asenbaum,
    P., … Aspelmeyer, M. (2024). Remote sensing of a levitated superconductor with
    a flux-tunable microwave cavity. <i>Physical Review Applied</i>. American Physical
    Society. <a href="https://doi.org/10.1103/PhysRevApplied.22.014078">https://doi.org/10.1103/PhysRevApplied.22.014078</a>
  chicago: Schmidt, Philip, Remi Claessen, Gerard Higgins, Joachim Hofer, Jannek J.
    Hansen, Peter Asenbaum, Martin Zemlicka, et al. “Remote Sensing of a Levitated
    Superconductor with a Flux-Tunable Microwave Cavity.” <i>Physical Review Applied</i>.
    American Physical Society, 2024. <a href="https://doi.org/10.1103/PhysRevApplied.22.014078">https://doi.org/10.1103/PhysRevApplied.22.014078</a>.
  ieee: P. Schmidt <i>et al.</i>, “Remote sensing of a levitated superconductor with
    a flux-tunable microwave cavity,” <i>Physical Review Applied</i>, vol. 22. American
    Physical Society, 2024.
  ista: Schmidt P, Claessen R, Higgins G, Hofer J, Hansen JJ, Asenbaum P, Zemlicka
    M, Uhl K, Kleiner R, Gross R, Huebl H, Trupke M, Aspelmeyer M. 2024. Remote sensing
    of a levitated superconductor with a flux-tunable microwave cavity. Physical Review
    Applied. 22, 014078.
  mla: Schmidt, Philip, et al. “Remote Sensing of a Levitated Superconductor with
    a Flux-Tunable Microwave Cavity.” <i>Physical Review Applied</i>, vol. 22, 014078,
    American Physical Society, 2024, doi:<a href="https://doi.org/10.1103/PhysRevApplied.22.014078">10.1103/PhysRevApplied.22.014078</a>.
  short: P. Schmidt, R. Claessen, G. Higgins, J. Hofer, J.J. Hansen, P. Asenbaum,
    M. Zemlicka, K. Uhl, R. Kleiner, R. Gross, H. Huebl, M. Trupke, M. Aspelmeyer,
    Physical Review Applied 22 (2024).
date_created: 2024-08-11T22:01:12Z
date_published: 2024-07-30T00:00:00Z
date_updated: 2025-09-08T08:50:31Z
day: '30'
department:
- _id: JoFi
doi: 10.1103/PhysRevApplied.22.014078
external_id:
  arxiv:
  - '2401.08854'
  isi:
  - '001284571700002'
intvolume: '        22'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.48550/arXiv.2401.08854
month: '07'
oa: 1
oa_version: Preprint
publication: Physical Review Applied
publication_identifier:
  eissn:
  - 2331-7019
publication_status: published
publisher: American Physical Society
quality_controlled: '1'
scopus_import: '1'
status: public
title: Remote sensing of a levitated superconductor with a flux-tunable microwave
  cavity
type: journal_article
user_id: 317138e5-6ab7-11ef-aa6d-ffef3953e345
volume: 22
year: '2024'
...
---
_id: '17411'
abstract:
- lang: eng
  text: "We present PeFLL, a new personalized federated learning algorithm that improves\r\nover
    the state-of-the-art in three aspects: 1) it produces more accurate models,\r\nespecially
    in the low-data regime, and not only for clients present during its\r\ntraining
    phase, but also for any that may emerge in the future; 2) it reduces the\r\namount
    of on-client computation and client-server communication by providing\r\nfuture
    clients with ready-to-use personalized models that require no additional\r\nfinetuning
    or optimization; 3) it comes with theoretical guarantees that establish\r\ngeneralization
    from the observed clients to future ones.\r\nAt the core of PeFLL lies a learning-to-learn
    approach that jointly trains an\r\nembedding network and a hypernetwork. The embedding
    network is used to\r\nrepresent clients in a latent descriptor space in a way
    that reflects their similarity\r\nto each other. The hypernetwork takes as input
    such descriptors and outputs the\r\nparameters of fully personalized client models.
    In combination, both networks\r\nconstitute a learning algorithm that achieves
    state-of-the-art performance in several\r\npersonalized federated learning benchmarks"
acknowledged_ssus:
- _id: ScienComp
acknowledgement: "This research was supported by the Scientific Service Units (SSU)
  of ISTA through resources provided by Scientific Computing (SciComp).\r\n"
article_processing_charge: No
arxiv: 1
author:
- first_name: Jonathan A
  full_name: Scott, Jonathan A
  id: e499926b-f6e0-11ea-865d-9c63db0031e8
  last_name: Scott
- first_name: Hossein
  full_name: Zakerinia, Hossein
  id: 653bd8b6-f394-11eb-9cf6-c0bbf6cd78d4
  last_name: Zakerinia
  orcid: 0009-0007-3977-6462
- first_name: Christoph
  full_name: Lampert, Christoph
  id: 40C20FD2-F248-11E8-B48F-1D18A9856A87
  last_name: Lampert
  orcid: 0000-0001-8622-7887
citation:
  ama: 'Scott JA, Zakerinia H, Lampert C. PEFLL: Personalized federated learning by
    learning to learn. In: <i>12th International Conference on Learning Representations</i>.
    OpenReview; 2024.'
  apa: 'Scott, J. A., Zakerinia, H., &#38; Lampert, C. (2024). PEFLL: Personalized
    federated learning by learning to learn. In <i>12th International Conference on
    Learning Representations</i>. Vienna, Austria: OpenReview.'
  chicago: 'Scott, Jonathan A, Hossein Zakerinia, and Christoph Lampert. “PEFLL: Personalized
    Federated Learning by Learning to Learn.” In <i>12th International Conference
    on Learning Representations</i>. OpenReview, 2024.'
  ieee: 'J. A. Scott, H. Zakerinia, and C. Lampert, “PEFLL: Personalized federated
    learning by learning to learn,” in <i>12th International Conference on Learning
    Representations</i>, Vienna, Austria, 2024.'
  ista: 'Scott JA, Zakerinia H, Lampert C. 2024. PEFLL: Personalized federated learning
    by learning to learn. 12th International Conference on Learning Representations.
    ICLR: International Conference on Learning Representations.'
  mla: 'Scott, Jonathan A., et al. “PEFLL: Personalized Federated Learning by Learning
    to Learn.” <i>12th International Conference on Learning Representations</i>, OpenReview,
    2024.'
  short: J.A. Scott, H. Zakerinia, C. Lampert, in:, 12th International Conference
    on Learning Representations, OpenReview, 2024.
conference:
  end_date: 2024-03-07
  location: Vienna, Austria
  name: 'ICLR: International Conference on Learning Representations'
  start_date: 2024-03-07
corr_author: '1'
date_created: 2024-08-11T22:01:12Z
date_published: 2024-03-07T00:00:00Z
date_updated: 2026-04-07T11:46:11Z
day: '07'
ddc:
- '000'
department:
- _id: ChLa
external_id:
  arxiv:
  - '2306.05515'
file:
- access_level: open_access
  checksum: 81b7ea2e667adaf9c7a7b6b376b1f251
  content_type: application/pdf
  creator: dernst
  date_created: 2024-08-12T07:38:06Z
  date_updated: 2024-08-12T07:38:06Z
  file_id: '17415'
  file_name: 2024_ICLR_Scott.pdf
  file_size: 1029219
  relation: main_file
  success: 1
file_date_updated: 2024-08-12T07:38:06Z
has_accepted_license: '1'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
publication: 12th International Conference on Learning Representations
publication_status: published
publisher: OpenReview
quality_controlled: '1'
related_material:
  record:
  - id: '21198'
    relation: dissertation_contains
    status: public
scopus_import: '1'
status: public
title: 'PEFLL: Personalized federated learning by learning to learn'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2024'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '17412'
abstract:
- lang: eng
  text: The electroreduction of biomass-derived benzaldehyde (BZH) provides a potentially
    cost-effective route to produce benzyl alcohol (BA). This reaction competes with
    the electrochemical self-coupling of BZH to hydrobenzoin (HDB), which holds significance
    as a biofuel. Herein, we demonstrate the selectivity towards one or the other
    product strongly depends on the surface chemistry of the catalyst, specifically
    on its ability to adsorb hydrogen, as showcased with Cu2S electrocatalysts. We
    particularly analyze the effect of surface ligands, oleylamine (OAm), on the selective
    conversion of BZH to BA or HDB. The effect of the electrode potential, electrolyte
    pH, and temperature are studied. Results indicate that bare Cu2S exhibits higher
    selectivity towards BA, while OAm-capped Cu2S promotes HDB formation. This difference
    is explained by the competing adsorption of protons and BZH. During the BZH electrochemical
    conversion, electrons first transfer to the C in the C[double bond, length as
    m-dash]O group to form a ketyl radical. Then the radical either couples with surrounding
    H+ to form BA or self-couple to produce HDB, depending on the H+ availability
    that is affected by the electrocatalyst surface properties. The presence of OAm
    inhibits the H adsorption on the electrode surface therefore reducing the formation
    of high-energy state Had and its combination with ketyl radicals to form BA. Instead,
    the presence of OAm promotes the outer sphere reaction for obtaining HDB.
acknowledgement: 'L. Gong and J. Yu thank the China Scholarship Council for the scholarship
  support. ICN2 acknowledges funding from Generalitat de Catalunya 2021SGR00457. This
  study is part of the Advanced Materials programme and was supported by MCIN with
  funding from European Union NextGenerationEU (PRTR-C17.I1) and by Generalitat de
  Catalunya. The authors thank support from the project NANOGEN (PID2020-116093RB-C43),
  funded by MCIN/AEI/10.13039/501100011033/and by “ERDF A way of making Europe”, by
  the “European Union”. ICN2 is supported by the Severo Ochoa program from Spanish
  MCIN/AEI (Grant No.: CEX2021-001214-S) and is funded by the CERCA Programme/Generalitat
  de Catalunya. Part of the present work has been performed in the framework of Universitat
  Autònoma de Barcelona Materials Science PhD program. Authors acknowledge the use
  of instrumentation as well as the technical advice provided by the Joint Electron
  Microscopy Center at ALBA (JEMCA). ICN2 acknowledges funding from Grant IU16-014206
  (METCAM-FIB) funded by the European Union through the European Regional Development
  Fund (ERDF), with the support of the Ministry of Research and Universities, Generalitat
  de Catalunya. ICN2 is founding member of e-DREAM.'
article_processing_charge: Yes
article_type: original
author:
- first_name: Li
  full_name: Gong, Li
  last_name: Gong
- first_name: Shiling
  full_name: Zhao, Shiling
  last_name: Zhao
- first_name: Jing
  full_name: Yu, Jing
  last_name: Yu
- first_name: Junshan
  full_name: Li, Junshan
  last_name: Li
- first_name: Jordi
  full_name: Arbiol, Jordi
  last_name: Arbiol
- first_name: Tanja
  full_name: Kallio, Tanja
  last_name: Kallio
- first_name: Mariano
  full_name: Calcabrini, Mariano
  id: 45D7531A-F248-11E8-B48F-1D18A9856A87
  last_name: Calcabrini
  orcid: 0000-0003-4566-5877
- first_name: Paulina R.
  full_name: Martínez-Alanis, Paulina R.
  last_name: Martínez-Alanis
- first_name: Maria
  full_name: Ibáñez, Maria
  id: 43C61214-F248-11E8-B48F-1D18A9856A87
  last_name: Ibáñez
  orcid: 0000-0001-5013-2843
- first_name: Andreu
  full_name: Cabot, Andreu
  last_name: Cabot
citation:
  ama: Gong L, Zhao S, Yu J, et al. Influence of the catalyst surface chemistry on
    the electrochemical self-coupling of biomass-derived benzaldehyde into hydrobenzoin.
    <i>Energy Advances</i>. 2024;3(9):2287-2294. doi:<a href="https://doi.org/10.1039/d4ya00334a">10.1039/d4ya00334a</a>
  apa: Gong, L., Zhao, S., Yu, J., Li, J., Arbiol, J., Kallio, T., … Cabot, A. (2024).
    Influence of the catalyst surface chemistry on the electrochemical self-coupling
    of biomass-derived benzaldehyde into hydrobenzoin. <i>Energy Advances</i>. Royal
    Society of Chemistry. <a href="https://doi.org/10.1039/d4ya00334a">https://doi.org/10.1039/d4ya00334a</a>
  chicago: Gong, Li, Shiling Zhao, Jing Yu, Junshan Li, Jordi Arbiol, Tanja Kallio,
    Mariano Calcabrini, Paulina R. Martínez-Alanis, Maria Ibáñez, and Andreu Cabot.
    “Influence of the Catalyst Surface Chemistry on the Electrochemical Self-Coupling
    of Biomass-Derived Benzaldehyde into Hydrobenzoin.” <i>Energy Advances</i>. Royal
    Society of Chemistry, 2024. <a href="https://doi.org/10.1039/d4ya00334a">https://doi.org/10.1039/d4ya00334a</a>.
  ieee: L. Gong <i>et al.</i>, “Influence of the catalyst surface chemistry on the
    electrochemical self-coupling of biomass-derived benzaldehyde into hydrobenzoin,”
    <i>Energy Advances</i>, vol. 3, no. 9. Royal Society of Chemistry, pp. 2287–2294,
    2024.
  ista: Gong L, Zhao S, Yu J, Li J, Arbiol J, Kallio T, Calcabrini M, Martínez-Alanis
    PR, Ibáñez M, Cabot A. 2024. Influence of the catalyst surface chemistry on the
    electrochemical self-coupling of biomass-derived benzaldehyde into hydrobenzoin.
    Energy Advances. 3(9), 2287–2294.
  mla: Gong, Li, et al. “Influence of the Catalyst Surface Chemistry on the Electrochemical
    Self-Coupling of Biomass-Derived Benzaldehyde into Hydrobenzoin.” <i>Energy Advances</i>,
    vol. 3, no. 9, Royal Society of Chemistry, 2024, pp. 2287–94, doi:<a href="https://doi.org/10.1039/d4ya00334a">10.1039/d4ya00334a</a>.
  short: L. Gong, S. Zhao, J. Yu, J. Li, J. Arbiol, T. Kallio, M. Calcabrini, P.R.
    Martínez-Alanis, M. Ibáñez, A. Cabot, Energy Advances 3 (2024) 2287–2294.
date_created: 2024-08-11T22:01:12Z
date_published: 2024-09-01T00:00:00Z
date_updated: 2025-01-09T12:30:16Z
day: '01'
ddc:
- '540'
department:
- _id: MaIb
doi: 10.1039/d4ya00334a
file:
- access_level: open_access
  checksum: 4a49515ec90354d005852e741bff1d29
  content_type: application/pdf
  creator: dernst
  date_created: 2025-01-09T12:29:09Z
  date_updated: 2025-01-09T12:29:09Z
  file_id: '18812'
  file_name: 2024_EnergyAdvances_Gong.pdf
  file_size: 1448762
  relation: main_file
  success: 1
file_date_updated: 2025-01-09T12:29:09Z
has_accepted_license: '1'
intvolume: '         3'
issue: '9'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/3.0/
month: '09'
oa: 1
oa_version: Published Version
page: 2287-2294
publication: Energy Advances
publication_identifier:
  eissn:
  - 2753-1457
publication_status: published
publisher: Royal Society of Chemistry
quality_controlled: '1'
scopus_import: '1'
status: public
title: Influence of the catalyst surface chemistry on the electrochemical self-coupling
  of biomass-derived benzaldehyde into hydrobenzoin
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/3.0/legalcode
  name: Creative Commons Attribution-NonCommercial 3.0 Unported (CC BY-NC 3.0)
  short: CC BY-NC (3.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 3
year: '2024'
...
