---
DOAJ_listed: '1'
OA_place: publisher
OA_type: diamond
PlanS_conform: '1'
_id: '21951'
abstract:
- lang: eng
  text: "The central engines of Little Red Dots (LRDs) may be “black hole stars” (BH*s),
    early stages of\r\nblack hole growth characterized by dense gas envelopes. So
    far, the most direct evidence for BH*s\r\ncomes from a handful of sources where
    the host galaxy is completely outshone as suggested by their\r\nremarkably steep
    Balmer breaks. Here we present a novel scheme to disentangle BH*s from their\r\nhost
    galaxies assuming that the [O III]5008˚A line arises exclusively from the host.
    Using a sample\r\nof 98 LRDs (z ≈ 2 − 9) with high quality NIRSpec/PRISM spectra,
    we demonstrate that the hostsubtracted median stack displays a Balmer break >
    2× stronger than massive quiescent galaxies,\r\nwith the rest-optical continuum
    resembling a blackbody-like SED (Teff ≈ 4050 K, log(Lbol) ≈ 43.9\r\nerg s−1\r\n,
    Reff ≈ 1300 au). We measure a steep Balmer decrement (Hα/Hβ > 10) and numerous\r\ndensity-sensitive
    features (e.g., Fe II, He I, O I). These are hallmark signatures of dense gas
    envelopes,\r\nproviding population-level evidence that BH*s indeed power LRDs.
    In the median LRD, BH*s account\r\nfor ∼ 20% of the UV emission, ∼ 50% at the
    Balmer break, and ∼ 90% at wavelengths longer\r\nthan Hα with the remainder arising
    from the host. BH*s preferentially reside in low-mass galaxies\r\n(M⋆ ≈ 108 M⊙)
    undergoing recent starbursts, as evidenced by extreme emission line EWs (e.g.,\r\n[O
    III]5008˚A≈ 1100˚A, C III]≈ 12˚A), thereby favoring BH* origins linked to star-formation.
    We show\r\nV-shaped LRD selections are biased to high BH*/host fractions (≳ 60%
    at 5500˚A) – less dominant\r\nBH*s may be powering JWST’s blue broad-line AGN.
    We find BH*s are so commonplace and transient\r\n(duty cycle ∼ 1%, lifetime ∼
    10 Myrs) that every massive black hole may have once shone as a BH*.\r\n"
acknowledgement: "We thank the two anonymous referees for their insightful comments
  that have strengthened this work.\r\nWQS and RPN acknowledge funding from JWST programs
  GO-3516, GO-5224, and the MIT Undergraduate\r\nResearch Opportunities Program (UROP).
  Support for\r\nthis work was provided by NASA through the NASA\r\nHubble Fellowship
  grant HST-HF2-51515.001-A awarded\r\nby the Space Telescope Science Institute, which
  is operated by the Association of Universities for Research in\r\nAstronomy, Incorporated,
  under NASA contract NAS5-\r\n26555. RPN thanks Neil Pappalardo and Jane Pappalardo
  for their generous support of the MIT Pappalardo Fellowships in Physics, and for
  their enthusiasm\r\nand encouragement for pursuing the earliest galaxies and\r\nblack
  holes. JM and AT acknowledge funding from the\r\nEuropean Union (ERC, AGENTS, 101076224).
  KEH\r\nacknowledges support from the Independent Research Fund Denmark (DFF) under
  grant 5251-00009B and cofunding by the European Union (ERC, HEAVYMETAL,\r\n101071865).
  Views and opinions expressed are, however,\r\nthose of the authors only and do not
  necessarily reflect\r\nthose of the European Union or the European Research\r\nCouncil.
  Neither the European Union nor the granting\r\nauthority can be held responsible
  for them. REH acknowledges support by the German Aerospace Center\r\n(DLR) and the
  Federal Ministry for Economic Affairs\r\nand Energy (BMWi) through program 50OR2403
  ‘RUBIES’.\r\nThe data products presented herein were retrieved\r\nfrom the Dawn
  JWST Archive (DJA). DJA is an initiative of the Cosmic Dawn Center (DAWN), which
  is\r\nfunded by the Danish National Research Foundation under grant DNRF140. This
  work is based on observations\r\nmade with the NASA/ESA/CSA James Webb Space\r\nTelescope.
  The data were obtained from the Mikulski Archive for Space Telescopes at the Space
  Telescope\r\nScience Institute, which is operated by the Association\r\nof Universities
  for Research in Astronomy, Inc., under\r\nNASA contract NAS 5-03127 for JWST. Support
  for\r\nprograms #3516, #5224, #5664 was provided by NASA\r\nthrough grants from
  the Space Telescope Science Institute, which is operated by the Association of Universities\r\nfor
  Research in Astronomy, Inc., under NASA contract\r\nNAS 5-03127.\r\nThe spectra
  used in this paper are associated with programs 1180 (D’Eugenio et al. 2025d), 1181
  (PI: D. Eisenstein), 1208 (Willott et al. 2022), 1210 (PI: N. Luetzgendorf), 1211
  (Maseda et al. 2024), 1212 - 1215 (PI: N.\r\nLuetzgendorf), 1228 (Luhman et al.
  2024b), 1229 (Luhman et al. 2024a), 1286 (PI: N. Luetzgendorf), 1287 (PI:\r\nK.
  Isaak), 1345 (Finkelstein et al. 2023), 1433 (Hsiao\r\net al. 2024), 1747 (PI: G.
  Roberts-Borsani), 2028 (Wang\r\net al. 2024c), 2073 (PI: J. Hennawi), 2198 (Barrufet\r\net
  al. 2025), 2282 (Bradley et al. 2023), 2561 (Bezanson\r\net al. 2024), 2565 (Nanayakkara
  et al. 2025), 2640 (PI:\r\nW. Best), 2750 (Arrabal Haro et al. 2023), 2756 (Mascia
  et al. 2024), 2767 (Williams et al. 2023b), 2770 (PI:\r\nM. McCaughrean), 3073 (Castellano
  et al. 2024), 3215\r\n(Eisenstein et al. 2025), 4106 (PI: E. Nelson), 4233 (de\r\nGraaff
  et al. 2025c), 4446 (Frye et al. 2024), 4557 (PI: H.\r\nYan), 5105 (Shen et al.
  2024), 5224 (PIs: P.A. Oesch &\r\nR.P. Naidu), 6368 (PI: M. Dickinson), 6541 (DeCoursey\r\net
  al. 2025), 6585 (PI: D. Coulter), 6642 (PI: J. Muzerolle\r\nPage), and FRESCO IFU
  (Matthee et al. 2024; Torralba\r\net al. 2025b).\r\nSoftware used in developing
  this work includes:\r\nmatplotlib (Hunter 2007), jupyter (Kluyver et al.\r\n2016),
  IPython (P´erez & Granger 2007), numpy\r\n(Oliphant 2015), scipy (Virtanen et al.
  2020), TOPCAT\r\n(Taylor 2005), Astropy (Astropy Collaboration et al.\r\n2013),
  msaexp (Brammer 2023)."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Wendy Q.
  full_name: Sun, Wendy Q.
  last_name: Sun
- first_name: Rohan P.
  full_name: Naidu, Rohan P.
  last_name: Naidu
- first_name: Jorryt J
  full_name: Matthee, Jorryt J
  id: 7439a258-f3c0-11ec-9501-9df22fe06720
  last_name: Matthee
  orcid: 0000-0003-2871-127X
- first_name: Anna
  full_name: De Graaff, Anna
  last_name: De Graaff
- first_name: John
  full_name: Chisholm, John
  last_name: Chisholm
- first_name: Jenny E.
  full_name: Greene, Jenny E.
  last_name: Greene
- first_name: Pascal A.
  full_name: Oesch, Pascal A.
  last_name: Oesch
- first_name: Alberto
  full_name: Torralba Torregrosa, Alberto
  id: 018f0249-0e87-11f0-b167-cbce08fbd541
  last_name: Torralba Torregrosa
  orcid: 0000-0001-5586-6950
- first_name: Raphael E.
  full_name: Hviding, Raphael E.
  last_name: Hviding
- first_name: Gabriel
  full_name: Brammer, Gabriel
  last_name: Brammer
- first_name: Robert A.
  full_name: Simcoe, Robert A.
  last_name: Simcoe
- first_name: Sownak
  full_name: Bose, Sownak
  last_name: Bose
- first_name: Rychard
  full_name: Bouwens, Rychard
  last_name: Bouwens
- first_name: Pratika
  full_name: Dayal, Pratika
  last_name: Dayal
- first_name: Anna Christina
  full_name: Eilers, Anna Christina
  last_name: Eilers
- first_name: Qinyue
  full_name: Fei, Qinyue
  last_name: Fei
- first_name: Lukas J.
  full_name: Furtak, Lukas J.
  last_name: Furtak
- first_name: Rashmi
  full_name: Gottumukkala, Rashmi
  last_name: Gottumukkala
- first_name: Andy
  full_name: Goulding, Andy
  last_name: Goulding
- first_name: Kasper E.
  full_name: Heintz, Kasper E.
  last_name: Heintz
- first_name: Michaela
  full_name: Hirschmann, Michaela
  last_name: Hirschmann
- first_name: Vasily
  full_name: Kokorev, Vasily
  last_name: Kokorev
- first_name: Joel
  full_name: Leja, Joel
  last_name: Leja
- first_name: Zhaoran
  full_name: Liu, Zhaoran
  last_name: Liu
- first_name: Priyamvada
  full_name: Natarajan, Priyamvada
  last_name: Natarajan
- first_name: Andrew D.
  full_name: Santarelli, Andrew D.
  last_name: Santarelli
- first_name: David J.
  full_name: Setton, David J.
  last_name: Setton
- first_name: Aaron
  full_name: Smith, Aaron
  last_name: Smith
- first_name: Sandro
  full_name: Tacchella, Sandro
  last_name: Tacchella
- first_name: Marta
  full_name: Volonteri, Marta
  last_name: Volonteri
- first_name: Fabian
  full_name: Walter, Fabian
  last_name: Walter
- first_name: Andrea
  full_name: Weibel, Andrea
  last_name: Weibel
- first_name: Christina C.
  full_name: Williams, Christina C.
  last_name: Williams
citation:
  ama: 'Sun WQ, Naidu RP, Matthee JJ, et al. Little Red Dot - Host Galaxy = Black
    Hole Star: A gas-enshrouded heart at the center of every Little Red Dot. <i>The
    Open Journal of Astrophysics</i>. 2026;9. doi:<a href="https://doi.org/10.33232/001c.162505">10.33232/001c.162505</a>'
  apa: 'Sun, W. Q., Naidu, R. P., Matthee, J. J., De Graaff, A., Chisholm, J., Greene,
    J. E., … Williams, C. C. (2026). Little Red Dot - Host Galaxy = Black Hole Star:
    A gas-enshrouded heart at the center of every Little Red Dot. <i>The Open Journal
    of Astrophysics</i>. Maynooth Academic Publishing. <a href="https://doi.org/10.33232/001c.162505">https://doi.org/10.33232/001c.162505</a>'
  chicago: 'Sun, Wendy Q., Rohan P. Naidu, Jorryt J Matthee, Anna De Graaff, John
    Chisholm, Jenny E. Greene, Pascal A. Oesch, et al. “Little Red Dot - Host Galaxy
    = Black Hole Star: A Gas-Enshrouded Heart at the Center of Every Little Red Dot.”
    <i>The Open Journal of Astrophysics</i>. Maynooth Academic Publishing, 2026. <a
    href="https://doi.org/10.33232/001c.162505">https://doi.org/10.33232/001c.162505</a>.'
  ieee: 'W. Q. Sun <i>et al.</i>, “Little Red Dot - Host Galaxy = Black Hole Star:
    A gas-enshrouded heart at the center of every Little Red Dot,” <i>The Open Journal
    of Astrophysics</i>, vol. 9. Maynooth Academic Publishing, 2026.'
  ista: 'Sun WQ, Naidu RP, Matthee JJ, De Graaff A, Chisholm J, Greene JE, Oesch PA,
    Torralba Torregrosa A, Hviding RE, Brammer G, Simcoe RA, Bose S, Bouwens R, Dayal
    P, Eilers AC, Fei Q, Furtak LJ, Gottumukkala R, Goulding A, Heintz KE, Hirschmann
    M, Kokorev V, Leja J, Liu Z, Natarajan P, Santarelli AD, Setton DJ, Smith A, Tacchella
    S, Volonteri M, Walter F, Weibel A, Williams CC. 2026. Little Red Dot - Host Galaxy
    = Black Hole Star: A gas-enshrouded heart at the center of every Little Red Dot.
    The Open Journal of Astrophysics. 9.'
  mla: 'Sun, Wendy Q., et al. “Little Red Dot - Host Galaxy = Black Hole Star: A Gas-Enshrouded
    Heart at the Center of Every Little Red Dot.” <i>The Open Journal of Astrophysics</i>,
    vol. 9, Maynooth Academic Publishing, 2026, doi:<a href="https://doi.org/10.33232/001c.162505">10.33232/001c.162505</a>.'
  short: W.Q. Sun, R.P. Naidu, J.J. Matthee, A. De Graaff, J. Chisholm, J.E. Greene,
    P.A. Oesch, A. Torralba Torregrosa, R.E. Hviding, G. Brammer, R.A. Simcoe, S.
    Bose, R. Bouwens, P. Dayal, A.C. Eilers, Q. Fei, L.J. Furtak, R. Gottumukkala,
    A. Goulding, K.E. Heintz, M. Hirschmann, V. Kokorev, J. Leja, Z. Liu, P. Natarajan,
    A.D. Santarelli, D.J. Setton, A. Smith, S. Tacchella, M. Volonteri, F. Walter,
    A. Weibel, C.C. Williams, The Open Journal of Astrophysics 9 (2026).
date_created: 2026-06-07T22:01:36Z
date_published: 2026-05-25T00:00:00Z
date_updated: 2026-06-08T08:25:40Z
day: '25'
ddc:
- '520'
department:
- _id: JoMa
doi: 10.33232/001c.162505
external_id:
  arxiv:
  - '2601.20929'
file:
- access_level: open_access
  checksum: 33c4a444f7c37b3f47ecbd53eb187c1b
  content_type: application/pdf
  creator: dernst
  date_created: 2026-06-08T08:23:37Z
  date_updated: 2026-06-08T08:23:37Z
  file_id: '21952'
  file_name: 2026_OpenJourAstrophysics_Sun.pdf
  file_size: 7591188
  relation: main_file
  success: 1
file_date_updated: 2026-06-08T08:23:37Z
fulldoi: https://doi.org/10.33232/001c.162505
has_accepted_license: '1'
intvolume: '         9'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
project:
- _id: bd9b2118-d553-11ed-ba76-db24564edfea
  grant_number: '101076224'
  name: Young galaxies as tracers and agents of cosmic reionization
publication: The Open Journal of Astrophysics
publication_identifier:
  eissn:
  - 2565-6120
publication_status: published
publisher: Maynooth Academic Publishing
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Little Red Dot - Host Galaxy = Black Hole Star: A gas-enshrouded heart at
  the center of every Little Red Dot'
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 9
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '21954'
abstract:
- lang: eng
  text: We investigate a framework for train-free MRI segmentation based on Topological
    Data Analysis. The pipeline proceeds in three steps, first identifying the whole
    object to segment via automatic thresholding, then detecting a distinctive subset
    whose topology is known in advance, and finally deducing the various components
    of the segmentation. A key ingredient is the extraction of approximate representative
    cycles from persistence diagrams, which provides an interpretable link between
    persistent features and anatomical components. To clarify the method’s scope,
    we make the underlying topological and intensity assumptions explicit, quantify
    when they hold on real data, and analyze typical failure modes. We evaluate the
    approach on glioblastoma and on fetal cortical plate segmentation, with comparisons
    to unsupervised and deep-learning references. By operating without large annotated
    datasets, the method is well suited to scarce-data settings and provides an interpretable
    baseline and practical initialization for expert refinement or learning-based
    pipelines.
acknowledgement: Open access funding provided by Institute of Science and Technology
  (IST Austria).
article_number: '20'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Anton
  full_name: François, Anton
  last_name: François
- first_name: Raphaël
  full_name: Tinarrage, Raphaël
  id: 40ebcc9d-905f-11ef-bf0a-dc475da8a04e
  last_name: Tinarrage
  orcid: 0000-0002-1404-1095
citation:
  ama: François A, Tinarrage R. Train-free segmentation in MRI with cubical persistent
    homology. <i>Journal of Mathematical Imaging and Vision</i>. 2026;68(3). doi:<a
    href="https://doi.org/10.1007/s10851-026-01300-1">10.1007/s10851-026-01300-1</a>
  apa: François, A., &#38; Tinarrage, R. (2026). Train-free segmentation in MRI with
    cubical persistent homology. <i>Journal of Mathematical Imaging and Vision</i>.
    Springer Nature. <a href="https://doi.org/10.1007/s10851-026-01300-1">https://doi.org/10.1007/s10851-026-01300-1</a>
  chicago: François, Anton, and Raphaël Tinarrage. “Train-Free Segmentation in MRI
    with Cubical Persistent Homology.” <i>Journal of Mathematical Imaging and Vision</i>.
    Springer Nature, 2026. <a href="https://doi.org/10.1007/s10851-026-01300-1">https://doi.org/10.1007/s10851-026-01300-1</a>.
  ieee: A. François and R. Tinarrage, “Train-free segmentation in MRI with cubical
    persistent homology,” <i>Journal of Mathematical Imaging and Vision</i>, vol.
    68, no. 3. Springer Nature, 2026.
  ista: François A, Tinarrage R. 2026. Train-free segmentation in MRI with cubical
    persistent homology. Journal of Mathematical Imaging and Vision. 68(3), 20.
  mla: François, Anton, and Raphaël Tinarrage. “Train-Free Segmentation in MRI with
    Cubical Persistent Homology.” <i>Journal of Mathematical Imaging and Vision</i>,
    vol. 68, no. 3, 20, Springer Nature, 2026, doi:<a href="https://doi.org/10.1007/s10851-026-01300-1">10.1007/s10851-026-01300-1</a>.
  short: A. François, R. Tinarrage, Journal of Mathematical Imaging and Vision 68
    (2026).
corr_author: '1'
date_created: 2026-06-08T08:34:43Z
date_published: 2026-05-25T00:00:00Z
date_updated: 2026-06-10T08:00:52Z
day: '25'
ddc:
- '510'
department:
- _id: UlWa
doi: 10.1007/s10851-026-01300-1
external_id:
  arxiv:
  - '2401.01160'
file:
- access_level: open_access
  checksum: 34080653e0f9c6160856a6bbca9b5248
  content_type: application/pdf
  creator: dernst
  date_created: 2026-06-10T07:58:58Z
  date_updated: 2026-06-10T07:58:58Z
  file_id: '21990'
  file_name: 2026_JourMathImaging_Francois.pdf
  file_size: 6070434
  relation: main_file
  success: 1
file_date_updated: 2026-06-10T07:58:58Z
fulldoi: https://doi.org/10.1007/s10851-026-01300-1
has_accepted_license: '1'
intvolume: '        68'
issue: '3'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Published Version
publication: Journal of Mathematical Imaging and Vision
publication_identifier:
  eissn:
  - 1573-7683
  issn:
  - 0924-9907
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Train-free segmentation in MRI with cubical persistent homology
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 68
year: '2026'
...
---
OA_place: repository
OA_type: green
_id: '21955'
abstract:
- lang: eng
  text: 'AgRP neurons cause hunger, the drive to seek and consume food. Their activation
    by fasting is key for survival and is thought to be triggered by feedback when
    energy stores are low. However, we know that environmental cues can also regulate
    AgRP neurons since cues that predict future food intake rapidly inhibit AgRP neurons,
    but is the converse true: can the prediction of future fasting rapidly activate
    AgRP neurons? Here, we show in mice that such rapid fasting activation of AgRP
    neurons does occur. This rapid activation is driven by excitatory input from paraventricular
    hypothalamic (PVH) neurons expressing Sim2, which are bidirectionally sensitive
    to predictions of future energy state. Thus, cognitively processed contextual
    information conveyed by PVHSim2 neurons strongly activates AgRP neurons. Lastly,
    chronic silencing of PVHSim2 neurons causes persistent hypophagia. This PVHSim2-to-AgRP-neuron
    circuit, by anticipating and preventing negative energy balance, provides an important
    new dimension of hunger regulation.'
acknowledgement: "We thank all members of the B.B.L. laboratory for helpful discussions.
  We\r\nthank the BADERC and BNORC transgenic cores (NIH P30DK057521 and\r\nP30DK046200)
  for performing embryo injections to generate knockin mouse\r\nlines. We also thank
  the BIDMC Energy Balance Core (supported by NIH\r\nS10OD028635 and the Boston Area
  Diabetes Endocrinology Research Centers, P30DK135043), where Marissa Cortopassi
  performed indirect calorimetry experiments and Alexander Banks assisted with data
  analysis and interpretation. Confocal imaging was performed at BIDMC’s Confocal
  Imaging\r\nCore. We thank Chen Wu for assistance in designing knockin mouse lines.\r\nThis
  work was supported by the NIH (R01DK134427, R01DK096010, and\r\nR01DK075632 to B.B.L.).
  Authors were supported by an EMBO Long-Term\r\nFellowship (770-2018, S.J.W.), a
  T32 Postdoctoral Training Fellowship\r\n(5T32DK007516, E.D.L.), the Charles A. King
  Trust Postdoctoral Research\r\nFellowship program (A.M.D.), and a K99 Career Development
  Award\r\n(K99HL144923, J.M.R.)."
article_processing_charge: No
article_type: original
author:
- first_name: Samuel J.
  full_name: Walker, Samuel J.
  last_name: Walker
- first_name: Elijah D.
  full_name: Lowenstein, Elijah D.
  last_name: Lowenstein
- first_name: Amelia May Barnett
  full_name: Douglass, Amelia May Barnett
  id: de5f6fda-80fb-11ef-996f-a8c4ecd8e289
  last_name: Douglass
  orcid: 0000-0001-5398-6473
- first_name: Callum M.P.
  full_name: Thomas, Callum M.P.
  last_name: Thomas
- first_name: Joseph C.
  full_name: Madara, Joseph C.
  last_name: Madara
- first_name: Hakan
  full_name: Kucukdereli, Hakan
  last_name: Kucukdereli
- first_name: Eunice A.
  full_name: Barbosa-Meillon, Eunice A.
  last_name: Barbosa-Meillon
- first_name: Jenkang
  full_name: Tao, Jenkang
  last_name: Tao
- first_name: Jon M.
  full_name: Resch, Jon M.
  last_name: Resch
- first_name: Bradford B.
  full_name: Lowell, Bradford B.
  last_name: Lowell
citation:
  ama: Walker SJ, Lowenstein ED, Douglass AM, et al. A hypothalamic circuit for anticipating
    future changes in energy balance. <i>Neuron</i>. doi:<a href="https://doi.org/10.1016/j.neuron.2026.05.010">10.1016/j.neuron.2026.05.010</a>
  apa: Walker, S. J., Lowenstein, E. D., Douglass, A. M., Thomas, C. M. P., Madara,
    J. C., Kucukdereli, H., … Lowell, B. B. (n.d.). A hypothalamic circuit for anticipating
    future changes in energy balance. <i>Neuron</i>. Elsevier. <a href="https://doi.org/10.1016/j.neuron.2026.05.010">https://doi.org/10.1016/j.neuron.2026.05.010</a>
  chicago: Walker, Samuel J., Elijah D. Lowenstein, Amelia M. Douglass, Callum M.P.
    Thomas, Joseph C. Madara, Hakan Kucukdereli, Eunice A. Barbosa-Meillon, Jenkang
    Tao, Jon M. Resch, and Bradford B. Lowell. “A Hypothalamic Circuit for Anticipating
    Future Changes in Energy Balance.” <i>Neuron</i>. Elsevier, n.d. <a href="https://doi.org/10.1016/j.neuron.2026.05.010">https://doi.org/10.1016/j.neuron.2026.05.010</a>.
  ieee: S. J. Walker <i>et al.</i>, “A hypothalamic circuit for anticipating future
    changes in energy balance,” <i>Neuron</i>. Elsevier.
  ista: Walker SJ, Lowenstein ED, Douglass AM, Thomas CMP, Madara JC, Kucukdereli
    H, Barbosa-Meillon EA, Tao J, Resch JM, Lowell BB. A hypothalamic circuit for
    anticipating future changes in energy balance. Neuron.
  mla: Walker, Samuel J., et al. “A Hypothalamic Circuit for Anticipating Future Changes
    in Energy Balance.” <i>Neuron</i>, Elsevier, doi:<a href="https://doi.org/10.1016/j.neuron.2026.05.010">10.1016/j.neuron.2026.05.010</a>.
  short: S.J. Walker, E.D. Lowenstein, A.M. Douglass, C.M.P. Thomas, J.C. Madara,
    H. Kucukdereli, E.A. Barbosa-Meillon, J. Tao, J.M. Resch, B.B. Lowell, Neuron
    (n.d.).
date_created: 2026-06-08T09:24:25Z
date_published: 2026-06-03T00:00:00Z
date_updated: 2026-06-16T08:35:11Z
day: '03'
department:
- _id: AmDo
doi: 10.1016/j.neuron.2026.05.010
external_id:
  pmid:
  - '42235510'
fulldoi: https://doi.org/10.1016/j.neuron.2026.05.010
keyword:
- hunger
- hypothalamus
- AGRP neurons
- neuroscience
- metabolism
- homeostasis
- feeding
- food intake
- energy balance
- appetite
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1101/2025.09.27.678865
month: '06'
oa: 1
oa_version: Preprint
pmid: 1
publication: Neuron
publication_identifier:
  eissn:
  - ' 1097-4199'
  issn:
  - 0896-6273
publication_status: inpress
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: A hypothalamic circuit for anticipating future changes in energy balance
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
OA_place: repository
OA_type: green
_id: '21962'
abstract:
- lang: eng
  text: The generation of faithful cell-type diversity and correct projection neuron
    numbers is essential for cerebral cortex development. Corticogenesis is however
    susceptible to genetic interference of critical signaling pathways, including
    mutations in Mtor/Rptor that lead to microcephaly. How the loss of Rptor/mTORC1
    function affects cortical developmental programs, at single cell level, is still
    unknown. Here, we utilized Mosaic Analysis with Double Markers (MADM) technology
    to probe Rptor gene function upon sparse single cell- or global tissue-wide ablation.
    We found that tissue-wide effects drive the etiology of cortical microcephaly
    upon loss of Rptor, rather than deficits in projection neuron genesis. Conversely,
    Rptor function is cell-autonomously required for postnatal projection neuron survival
    in a highly cell-type-specific manner. Collectively, our results suggest that
    the fine balance of precise cell-type-specific cell-autonomous Rptor/mTORC1 function
    in concert with non-cell-autonomous tissue-wide effects is essential for the development
    of a properly-sized cerebral cortex with accurate projection neuron diversity.
acknowledged_ssus:
- _id: PreCl
- _id: LifeSc
- _id: MassSpec
- _id: Bio
acknowledgement: "We thank A. Heger (IST Austria Preclinical Facility), A. Sommer
  (VBCF GmbH, NGS Unit), and A.\r\nNicolas (IST Austria Lab Support Facility / Mass
  Spectrometry Facility) for technical support; K. Ferencak,\r\nI. Aykara, P. Hirschfeld,
  E. Fisher, S. Laukoter, L. Andersen for initial experiments and/or assistance; and\r\nall
  members of the Hippenmeyer lab for discussion. This research was supported by the
  Scientific Service\r\nUnits (SSU) of IST Austria through resources provided by the
  Imaging and Optics- (IOF), Lab Support-\r\n(LSF) and Preclinical Facilities (PCF).
  R.B. received support from FWF Meitner-Programm (M 2416). This\r\nwork was also
  supported by IST Austria institutional funds; the People Programme (Marie Curie
  Actions)\r\nof the European Union’s Seventh Framework Programme (FP7/2007-2013)
  under REA grant agreement\r\nNo 618444 to S.H., and the European Research Council
  (ERC) under the European Union’s Horizon 2020\r\nresearch and innovation programme
  (grant agreement No 725780 LinPro) to S.H."
article_processing_charge: No
author:
- first_name: Ana
  full_name: Villalba Requena, Ana
  id: 68cb85a0-39f7-11eb-9559-9aaab4f6a247
  last_name: Villalba Requena
  orcid: 0000-0002-5615-5277
- first_name: Robert J
  full_name: Beattie, Robert J
  id: 2E26DF60-F248-11E8-B48F-1D18A9856A87
  last_name: Beattie
  orcid: 0000-0002-8483-8753
- first_name: Florian
  full_name: Pauler, Florian
  id: 48EA0138-F248-11E8-B48F-1D18A9856A87
  last_name: Pauler
  orcid: 0000-0002-7462-0048
- first_name: Carmen
  full_name: Streicher, Carmen
  id: 36BCB99C-F248-11E8-B48F-1D18A9856A87
  last_name: Streicher
- first_name: Osvaldo
  full_name: Miranda, Osvaldo
  id: 862A3C56-A8BF-11E9-B4FA-D9E3E5697425
  last_name: Miranda
  orcid: 0000-0001-6618-6889
- first_name: Thomas
  full_name: Krausgruber, Thomas
  last_name: Krausgruber
- first_name: Martin
  full_name: Senekowitsch, Martin
  last_name: Senekowitsch
- first_name: Matthias
  full_name: Farlik, Matthias
  last_name: Farlik
- first_name: Christoph
  full_name: Bock, Christoph
  last_name: Bock
- first_name: Thomas
  full_name: Rülicke, Thomas
  last_name: Rülicke
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
citation:
  ama: Villalba Requena A, Beattie RJ, Pauler F, et al. Mtor/Rptor function globally
    prevents cortical microcephaly and cell-autonomously promotes postnatal neuron
    survival in cell type specific manner. <i>bioRxiv</i>. doi:<a href="https://doi.org/10.64898/2026.05.01.722172">10.64898/2026.05.01.722172</a>
  apa: Villalba Requena, A., Beattie, R. J., Pauler, F., Streicher, C., Miranda, O.,
    Krausgruber, T., … Hippenmeyer, S. (n.d.). Mtor/Rptor function globally prevents
    cortical microcephaly and cell-autonomously promotes postnatal neuron survival
    in cell type specific manner. <i>bioRxiv</i>. <a href="https://doi.org/10.64898/2026.05.01.722172">https://doi.org/10.64898/2026.05.01.722172</a>
  chicago: Villalba Requena, Ana, Robert J Beattie, Florian Pauler, Carmen Streicher,
    Osvaldo Miranda, Thomas Krausgruber, Martin Senekowitsch, et al. “Mtor/Rptor Function
    Globally Prevents Cortical Microcephaly and Cell-Autonomously Promotes Postnatal
    Neuron Survival in Cell Type Specific Manner.” <i>BioRxiv</i>, n.d. <a href="https://doi.org/10.64898/2026.05.01.722172">https://doi.org/10.64898/2026.05.01.722172</a>.
  ieee: A. Villalba Requena <i>et al.</i>, “Mtor/Rptor function globally prevents
    cortical microcephaly and cell-autonomously promotes postnatal neuron survival
    in cell type specific manner,” <i>bioRxiv</i>. .
  ista: Villalba Requena A, Beattie RJ, Pauler F, Streicher C, Miranda O, Krausgruber
    T, Senekowitsch M, Farlik M, Bock C, Rülicke T, Hippenmeyer S. Mtor/Rptor function
    globally prevents cortical microcephaly and cell-autonomously promotes postnatal
    neuron survival in cell type specific manner. bioRxiv, <a href="https://doi.org/10.64898/2026.05.01.722172">10.64898/2026.05.01.722172</a>.
  mla: Villalba Requena, Ana, et al. “Mtor/Rptor Function Globally Prevents Cortical
    Microcephaly and Cell-Autonomously Promotes Postnatal Neuron Survival in Cell
    Type Specific Manner.” <i>BioRxiv</i>, doi:<a href="https://doi.org/10.64898/2026.05.01.722172">10.64898/2026.05.01.722172</a>.
  short: A. Villalba Requena, R.J. Beattie, F. Pauler, C. Streicher, O. Miranda, T.
    Krausgruber, M. Senekowitsch, M. Farlik, C. Bock, T. Rülicke, S. Hippenmeyer,
    BioRxiv (n.d.).
date_created: 2026-06-09T08:08:18Z
date_published: 2026-05-05T00:00:00Z
date_updated: 2026-06-16T08:45:25Z
day: '05'
ddc:
- '570'
department:
- _id: SiHi
doi: 10.64898/2026.05.01.722172
ec_funded: 1
fulldoi: https://doi.org/10.64898/2026.05.01.722172
has_accepted_license: '1'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc/4.0/
main_file_link:
- open_access: '1'
  url: https://doi.org/10.64898/2026.05.01.722172
month: '05'
oa: 1
oa_version: Preprint
project:
- _id: 264E56E2-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: M02416
  name: Molecular Mechanisms Regulating Gliogenesis in the Neocortex
- _id: 25D61E48-B435-11E9-9278-68D0E5697425
  call_identifier: FP7
  grant_number: '618444'
  name: Molecular Mechanisms of Cerebral Cortex Development
- _id: 260018B0-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '725780'
  name: Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development
publication: bioRxiv
publication_status: submitted
status: public
title: Mtor/Rptor function globally prevents cortical microcephaly and cell-autonomously
  promotes postnatal neuron survival in cell type specific manner
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
OA_place: repository
OA_type: green
_id: '21963'
abstract:
- lang: eng
  text: The cerebral cortex consists of immense numbers of neuronal and glial cell-types
    derived from radial glial progenitor (RGP) cells. How RGPs generate appropriate
    quantities of distinct cortical cell-types to safeguard a brain of correct size,
    is not well understood. However, genetic aberration in human, including mutations
    in PTEN, lead to cortical malformation such as macrocephaly, albeit with unknown
    etiology. Here we utilized Mosaic Analysis with Double Markers (MADM)-based clonal
    analysis and single cell phenotyping to decipher the role of Pten in neurogenic
    and gliogenic RGP lineage progression during cortical ontogeny. While neurogenic
    RGP lineage progression and projection neuron production was moderately altered
    in the absence of Pten, cortical astrocyte production was drastically increased.
    Through genetic epistasis experiments we show that the loss of Pten uncouples
    astrocyte generation from essential growth factor signaling hubs, funneling into
    MAPK. Collectively, our results suggest that Pten regulates RGP lineage progression
    with distinct sequential functions in cortical projection neurogenesis and astrocyte
    production to ensure the emergence of a correctly-sized cerebral cortex.
acknowledged_ssus:
- _id: Bio
- _id: LifeSc
- _id: PreCl
acknowledgement: "We thank Kay-Uwe Wagner (Wayne State University) for generously
  sharing Jak1/2–flox mouse lines; A.\r\nSommer (VBCF GmbH, NGS Unit) for technical
  support; N. Kim, V. Mick, S. Schnabl, S. Gobeil, and L.\r\nAndersen for technical
  assistance; all members of the Hippenmeyer lab for discussion and B. Novitch for\r\ncomments
  on earlier versions of the manuscript. This research was supported by the Scientific
  Service Units\r\n(SSU) of IST Austria through resources provided by the Imaging
  and Optics Facility (IOF), Lab Support-\r\n(LSF) and Preclinical Facilities (PCF).
  O.A.M received support from the Austrian Academy of Sciences\r\nÖAW (DOC 186584),
  and N.A. from FWF Elise Richter Program (Grant V1041T). This work was also\r\nsupported
  by IST Austria institutional funds; FWF SFB F78 (Neuro Stem Modulation) to S.H.,
  and the\r\nEuropean Research Council (ERC) under the European Union’s Horizon 2020
  research and innovation\r\nprogramme (grant agreement No 725780 LinPro) to S.H."
article_processing_charge: No
author:
- first_name: Osvaldo
  full_name: Miranda, Osvaldo
  id: 862A3C56-A8BF-11E9-B4FA-D9E3E5697425
  last_name: Miranda
  orcid: 0000-0001-6618-6889
- first_name: Ximena
  full_name: Contreras, Ximena
  id: 475990FE-F248-11E8-B48F-1D18A9856A87
  last_name: Contreras
- first_name: Florian
  full_name: Pauler, Florian
  id: 48EA0138-F248-11E8-B48F-1D18A9856A87
  last_name: Pauler
  orcid: 0000-0002-7462-0048
- first_name: Amarbayasgalan
  full_name: Davaatseren, Amarbayasgalan
  id: 70ADC922-B424-11E9-99E3-BA18E6697425
  last_name: Davaatseren
- first_name: Nicole
  full_name: Amberg, Nicole
  id: 4CD6AAC6-F248-11E8-B48F-1D18A9856A87
  last_name: Amberg
  orcid: 0000-0002-3183-8207
- first_name: Carmen
  full_name: Streicher, Carmen
  id: 36BCB99C-F248-11E8-B48F-1D18A9856A87
  last_name: Streicher
- first_name: Ana
  full_name: Villalba Requena, Ana
  id: 68cb85a0-39f7-11eb-9559-9aaab4f6a247
  last_name: Villalba Requena
  orcid: 0000-0002-5615-5277
- first_name: Anna-Magdalena
  full_name: Heger, Anna-Magdalena
  id: 4B76FFD2-F248-11E8-B48F-1D18A9856A87
  last_name: Heger
- first_name: Corentine
  full_name: Marie, Corentine
  last_name: Marie
- first_name: Bassem A.
  full_name: Hassan, Bassem A.
  last_name: Hassan
- first_name: Thomas
  full_name: Rülicke, Thomas
  last_name: Rülicke
- first_name: Simon
  full_name: Hippenmeyer, Simon
  id: 37B36620-F248-11E8-B48F-1D18A9856A87
  last_name: Hippenmeyer
  orcid: 0000-0003-2279-1061
citation:
  ama: Miranda O, Contreras X, Pauler F, et al. Pten orchestrates neurogenic radial
    glia lineage progression and tunes neocortical astrocyte production. <i>bioRxiv</i>.
    doi:<a href="https://doi.org/10.64898/2026.05.01.722191">10.64898/2026.05.01.722191</a>
  apa: Miranda, O., Contreras, X., Pauler, F., Davaatseren, A., Amberg, N., Streicher,
    C., … Hippenmeyer, S. (n.d.). Pten orchestrates neurogenic radial glia lineage
    progression and tunes neocortical astrocyte production. <i>bioRxiv</i>. <a href="https://doi.org/10.64898/2026.05.01.722191">https://doi.org/10.64898/2026.05.01.722191</a>
  chicago: Miranda, Osvaldo, Ximena Contreras, Florian Pauler, Amarbayasgalan Davaatseren,
    Nicole Amberg, Carmen Streicher, Ana Villalba Requena, et al. “Pten Orchestrates
    Neurogenic Radial Glia Lineage Progression and Tunes Neocortical Astrocyte Production.”
    <i>BioRxiv</i>, n.d. <a href="https://doi.org/10.64898/2026.05.01.722191">https://doi.org/10.64898/2026.05.01.722191</a>.
  ieee: O. Miranda <i>et al.</i>, “Pten orchestrates neurogenic radial glia lineage
    progression and tunes neocortical astrocyte production,” <i>bioRxiv</i>. .
  ista: Miranda O, Contreras X, Pauler F, Davaatseren A, Amberg N, Streicher C, Villalba
    Requena A, Heger A-M, Marie C, Hassan BA, Rülicke T, Hippenmeyer S. Pten orchestrates
    neurogenic radial glia lineage progression and tunes neocortical astrocyte production.
    bioRxiv, <a href="https://doi.org/10.64898/2026.05.01.722191">10.64898/2026.05.01.722191</a>.
  mla: Miranda, Osvaldo, et al. “Pten Orchestrates Neurogenic Radial Glia Lineage
    Progression and Tunes Neocortical Astrocyte Production.” <i>BioRxiv</i>, doi:<a
    href="https://doi.org/10.64898/2026.05.01.722191">10.64898/2026.05.01.722191</a>.
  short: O. Miranda, X. Contreras, F. Pauler, A. Davaatseren, N. Amberg, C. Streicher,
    A. Villalba Requena, A.-M. Heger, C. Marie, B.A. Hassan, T. Rülicke, S. Hippenmeyer,
    BioRxiv (n.d.).
corr_author: '1'
date_created: 2026-06-09T08:08:53Z
date_published: 2026-05-05T00:00:00Z
date_updated: 2026-06-16T08:57:20Z
day: '05'
ddc:
- '570'
department:
- _id: SiHi
- _id: PreCl
- _id: GradSch
doi: 10.64898/2026.05.01.722191
ec_funded: 1
fulldoi: https://doi.org/10.64898/2026.05.01.722191
has_accepted_license: '1'
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.64898/2026.05.01.722191
month: '05'
oa: 1
oa_version: Preprint
project:
- _id: 059F6AB4-7A3F-11EA-A408-12923DDC885E
  grant_number: F7805
  name: Stem Cell Modulation in Neural Development and Regeneration/ P05-Molecular
    Mechanisms of Neural Stem Cell Lineage Progression
- _id: 260018B0-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '725780'
  name: Principles of Neural Stem Cell Lineage Progression in Cerebral Cortex Development
publication: bioRxiv
publication_status: submitted
status: public
title: Pten orchestrates neurogenic radial glia lineage progression and tunes neocortical
  astrocyte production
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
OA_place: repository
OA_type: green
_id: '21968'
abstract:
- lang: eng
  text: Balancing selection, a form of selection that maintains genetic diversity,
    is difficult to detect, and the importance of balancing selection for the maintenance
    of genetic variation may be larger than often assumed. We model the possibility
    that the diversity-promoting effects of balancing selection extend to other loci
    that show sign epistasis with a locus under balancing selection. Rather than focusing
    on overdominance, as was done in previous efforts, we explore the effects of negative
    frequency dependence and show that this has important effects on the conditions
    under which the diversity-promoting effect of epistasis can occur in diploids.
    Our results show that not only recombination rate but also the dominance of sign
    epistasis are key parameters that determine the maintenance of polymorphism beyond
    the locus under direct balancing selection. We suggest that the effect we explore
    may play a significant role, especially when balancing selection acts on major
    effect loci.
acknowledgement: This work was funded by grants from the Swedish Research Council
  (2023-03730 to G.A.) and the DOC fellowship from the Austrian Academy of Science
  (26293 to K.K.).
article_processing_charge: No
author:
- first_name: Kseniia
  full_name: Khudiakova, Kseniia
  id: 4E6DC800-AE37-11E9-AC72-31CAE5697425
  last_name: Khudiakova
  orcid: 0000-0002-6246-1465
- first_name: Nicholas H
  full_name: Barton, Nicholas H
  id: 4880FE40-F248-11E8-B48F-1D18A9856A87
  last_name: Barton
  orcid: 0000-0002-8548-5240
- first_name: Goran
  full_name: Arnqvist, Goran
  last_name: Arnqvist
citation:
  ama: Khudiakova K, Barton NH, Arnqvist G. Sign epistasis extends the effects of
    balancing selection on genetic diversity. <i>bioRxiv</i>. doi:<a href="https://doi.org/10.1101/2025.04.09.647826">10.1101/2025.04.09.647826</a>
  apa: Khudiakova, K., Barton, N. H., &#38; Arnqvist, G. (n.d.). Sign epistasis extends
    the effects of balancing selection on genetic diversity. <i>bioRxiv</i>. <a href="https://doi.org/10.1101/2025.04.09.647826">https://doi.org/10.1101/2025.04.09.647826</a>
  chicago: Khudiakova, Kseniia, Nicholas H Barton, and Goran Arnqvist. “Sign Epistasis
    Extends the Effects of Balancing Selection on Genetic Diversity.” <i>BioRxiv</i>,
    n.d. <a href="https://doi.org/10.1101/2025.04.09.647826">https://doi.org/10.1101/2025.04.09.647826</a>.
  ieee: K. Khudiakova, N. H. Barton, and G. Arnqvist, “Sign epistasis extends the
    effects of balancing selection on genetic diversity,” <i>bioRxiv</i>. .
  ista: Khudiakova K, Barton NH, Arnqvist G. Sign epistasis extends the effects of
    balancing selection on genetic diversity. bioRxiv, <a href="https://doi.org/10.1101/2025.04.09.647826">10.1101/2025.04.09.647826</a>.
  mla: Khudiakova, Kseniia, et al. “Sign Epistasis Extends the Effects of Balancing
    Selection on Genetic Diversity.” <i>BioRxiv</i>, doi:<a href="https://doi.org/10.1101/2025.04.09.647826">10.1101/2025.04.09.647826</a>.
  short: K. Khudiakova, N.H. Barton, G. Arnqvist, BioRxiv (n.d.).
corr_author: '1'
date_created: 2026-06-09T12:26:11Z
date_published: 2026-04-23T00:00:00Z
date_updated: 2026-06-12T12:43:34Z
day: '23'
department:
- _id: NiBa
- _id: JaMa
doi: 10.1101/2025.04.09.647826
fulldoi: https://doi.org/10.1101/2025.04.09.647826
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1101/2025.04.09.647826
month: '04'
oa: 1
oa_version: Preprint
project:
- _id: 34d33d68-11ca-11ed-8bc3-ec13763c0ca8
  grant_number: '26293'
  name: The impact of deleterious mutations on small populations
publication: bioRxiv
publication_status: draft
related_material:
  record:
  - id: '21918'
    relation: dissertation_contains
    status: public
status: public
title: Sign epistasis extends the effects of balancing selection on genetic diversity
tmp:
  image: /images/cc_by_nc.png
  legal_code_url: https://creativecommons.org/licenses/by-nc/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial 4.0 International (CC BY-NC 4.0)
  short: CC BY-NC (4.0)
type: preprint
user_id: 8b945eb4-e2f2-11eb-945a-df72226e66a9
year: '2026'
...
---
_id: '21971'
abstract:
- lang: eng
  text: "A Rust library for analyzing dendritic structures using quadric matrices.
    This project provides efficient tools for representing dendritic trees, computing
    quadric error metrics, and visualizing eigenvalue distributions on hexagonal plots.\r\n\r\nThis
    library implements quadric-based geometric analysis of dendritic structures, commonly
    found in neuroscience applications. Key features include:\r\n\r\nTree data structures:
    Hierarchical vertex and edge representations for dendritic trees\r\nQuadric matrices:
    Computation of quadric error metrics for edges and vertices\r\nVisualisation:
    Hexagonal plot generation using NormPolar transformations\r\nInteractive tools:
    Desktop application with plotting capabilities"
author:
- first_name: Yossi
  full_name: Bleile, Yossi
  id: 920a7385-7995-11ef-9bfd-8c434cd8f3c2
  last_name: Bleile
  orcid: 0000-0002-4861-9174
- first_name: Emanuele
  full_name: Cortinovis, Emanuele
  last_name: Cortinovis
citation:
  ama: Bokor Bleile Y, Cortinovis E. Quadrix. 2026. doi:<a href="https://doi.org/10.15479/AT-ISTA-21971">10.15479/AT-ISTA-21971</a>
  apa: Bokor Bleile, Y., &#38; Cortinovis, E. (2026). Quadrix. Institute of Science
    and Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-21971">https://doi.org/10.15479/AT-ISTA-21971</a>
  chicago: Bokor Bleile, Yossi, and Emanuele Cortinovis. “Quadrix.” Institute of Science
    and Technology Austria, 2026. <a href="https://doi.org/10.15479/AT-ISTA-21971">https://doi.org/10.15479/AT-ISTA-21971</a>.
  ieee: Y. Bokor Bleile and E. Cortinovis, “Quadrix.” Institute of Science and Technology
    Austria, 2026.
  ista: Bokor Bleile Y, Cortinovis E. 2026. Quadrix, Institute of Science and Technology
    Austria, <a href="https://doi.org/10.15479/AT-ISTA-21971">10.15479/AT-ISTA-21971</a>.
  mla: Bokor Bleile, Yossi, and Emanuele Cortinovis. <i>Quadrix</i>. Institute of
    Science and Technology Austria, 2026, doi:<a href="https://doi.org/10.15479/AT-ISTA-21971">10.15479/AT-ISTA-21971</a>.
  short: Y. Bokor Bleile, E. Cortinovis, (2026).
corr_author: '1'
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doi: 10.15479/AT-ISTA-21971
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fulldoi: https://doi.org/10.15479/AT-ISTA-21971
has_accepted_license: '1'
keyword:
- quadratics
- mathematics
- dendrites
- geometry
- topology
license: https://opensource.org/licenses/MIT
month: '06'
oa: 1
project:
- _id: 9106a876-16d5-11f0-9cad-bbf11c9952f9
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  name: Quantitative Unbiased Shape Analysis with Geometry & Topology
publisher: Institute of Science and Technology Austria
status: public
title: Quadrix
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type: software
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...
---
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_id: '20328'
abstract:
- lang: eng
  text: We consider the standard overlap (math formular) of any bi-orthogonal family
    of left and right eigenvectors of a large random matrix X with centred i.i.d.
    entries and we prove that it decays as an inverse second power of the distance
    between the corresponding eigenvalues. This extends similar results for the complex
    Gaussian ensemble from Bourgade and Dubach [15], as well as Benaych-Georges and
    Zeitouni [13], to any i.i.d. matrix ensemble in both symmetry classes. As a main
    tool, we prove a two-resolvent local law for the Hermitisation of X uniformly
    in the spectrum with optimal decay rate and optimal dependence on the density
    near the spectral edge.
acknowledgement: Partially supported by ERC Advanced Grant “RMTBeyond” No. 101020331.
  Partially supported by National Key R&D Program of China No. 2024YFA1013503.
article_number: '111180'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Giorgio
  full_name: Cipolloni, Giorgio
  id: 42198EFA-F248-11E8-B48F-1D18A9856A87
  last_name: Cipolloni
  orcid: 0000-0002-4901-7992
- first_name: László
  full_name: Erdös, László
  id: 4DBD5372-F248-11E8-B48F-1D18A9856A87
  last_name: Erdös
  orcid: 0000-0001-5366-9603
- first_name: Yuanyuan
  full_name: Xu, Yuanyuan
  id: 7902bdb1-a2a4-11eb-a164-c9216f71aea3
  last_name: Xu
  orcid: 0000-0003-1559-1205
citation:
  ama: Cipolloni G, Erdös L, Xu Y. Optimal decay of eigenvector overlap for non-Hermitian
    random matrices. <i>Journal of Functional Analysis</i>. 2026;290(1). doi:<a href="https://doi.org/10.1016/j.jfa.2025.111180">10.1016/j.jfa.2025.111180</a>
  apa: Cipolloni, G., Erdös, L., &#38; Xu, Y. (2026). Optimal decay of eigenvector
    overlap for non-Hermitian random matrices. <i>Journal of Functional Analysis</i>.
    Elsevier. <a href="https://doi.org/10.1016/j.jfa.2025.111180">https://doi.org/10.1016/j.jfa.2025.111180</a>
  chicago: Cipolloni, Giorgio, László Erdös, and Yuanyuan Xu. “Optimal Decay of Eigenvector
    Overlap for Non-Hermitian Random Matrices.” <i>Journal of Functional Analysis</i>.
    Elsevier, 2026. <a href="https://doi.org/10.1016/j.jfa.2025.111180">https://doi.org/10.1016/j.jfa.2025.111180</a>.
  ieee: G. Cipolloni, L. Erdös, and Y. Xu, “Optimal decay of eigenvector overlap for
    non-Hermitian random matrices,” <i>Journal of Functional Analysis</i>, vol. 290,
    no. 1. Elsevier, 2026.
  ista: Cipolloni G, Erdös L, Xu Y. 2026. Optimal decay of eigenvector overlap for
    non-Hermitian random matrices. Journal of Functional Analysis. 290(1), 111180.
  mla: Cipolloni, Giorgio, et al. “Optimal Decay of Eigenvector Overlap for Non-Hermitian
    Random Matrices.” <i>Journal of Functional Analysis</i>, vol. 290, no. 1, 111180,
    Elsevier, 2026, doi:<a href="https://doi.org/10.1016/j.jfa.2025.111180">10.1016/j.jfa.2025.111180</a>.
  short: G. Cipolloni, L. Erdös, Y. Xu, Journal of Functional Analysis 290 (2026).
corr_author: '1'
date_created: 2025-09-10T05:46:07Z
date_published: 2026-01-01T00:00:00Z
date_updated: 2026-06-03T13:12:14Z
day: '01'
ddc:
- '510'
department:
- _id: LaEr
doi: 10.1016/j.jfa.2025.111180
ec_funded: 1
external_id:
  arxiv:
  - '2411.16572'
  isi:
  - '001583178200001'
  oaworkid:
  - w4413883397
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has_accepted_license: '1'
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isi: 1
issue: '1'
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- iso: eng
month: '01'
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oa_version: Published Version
oaworkid: 1
project:
- _id: 62796744-2b32-11ec-9570-940b20777f1d
  call_identifier: H2020
  grant_number: '101020331'
  name: Random matrices beyond Wigner-Dyson-Mehta
publication: Journal of Functional Analysis
publication_identifier:
  issn:
  - 0022-1236
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Optimal decay of eigenvector overlap for non-Hermitian random matrices
tmp:
  image: /images/cc_by.png
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  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 290
year: '2026'
...
---
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OA_type: hybrid
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_id: '20422'
abstract:
- lang: eng
  text: "We show that if n is odd and p>=Clog n/n, then with high probability Hamilton
    cycles in G(n,p) span its cycle space. More generally, we show this holds for
    a class of graphs satisfying certain natural pseudorandom properties. The proof
    is based on a novel idea of parity-switchers, which can be thought of as analogues
    of absorbers in the context of cycle spaces. As another application of our method,
    we show that Hamilton cycles in a near-Dirac graph G, that is, a graph G with
    odd n vertices and minimum degree n/2+C for sufficiently large constant C, span
    its cycle space.\r\n"
acknowledgement: This project has received funding from the European Union's Horizon
  2020 research and innovation programme under the Marie Skłodowska-Curie grant agreement
  No 101034413. Image 1 Part of this research was conducted while the author was at
  Department of Computer Science, ETH Zürich, Switzerland. This author was supported
  by grant no. CRSII5 173721 of the Swiss National Science Foundation.
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Micha
  full_name: Christoph, Micha
  last_name: Christoph
- first_name: Rajko
  full_name: Nenadov, Rajko
  last_name: Nenadov
- first_name: Kalina H
  full_name: Petrova, Kalina H
  id: 554ff4e4-f325-11ee-b0c4-a10dbd523381
  last_name: Petrova
citation:
  ama: Christoph M, Nenadov R, Petrova KH. The Hamilton space of pseudorandom graphs.
    <i>Journal of Combinatorial Theory Series B</i>. 2026;176:254-267. doi:<a href="https://doi.org/10.1016/j.jctb.2025.09.002">10.1016/j.jctb.2025.09.002</a>
  apa: Christoph, M., Nenadov, R., &#38; Petrova, K. H. (2026). The Hamilton space
    of pseudorandom graphs. <i>Journal of Combinatorial Theory Series B</i>. Elsevier.
    <a href="https://doi.org/10.1016/j.jctb.2025.09.002">https://doi.org/10.1016/j.jctb.2025.09.002</a>
  chicago: Christoph, Micha, Rajko Nenadov, and Kalina H Petrova. “The Hamilton Space
    of Pseudorandom Graphs.” <i>Journal of Combinatorial Theory Series B</i>. Elsevier,
    2026. <a href="https://doi.org/10.1016/j.jctb.2025.09.002">https://doi.org/10.1016/j.jctb.2025.09.002</a>.
  ieee: M. Christoph, R. Nenadov, and K. H. Petrova, “The Hamilton space of pseudorandom
    graphs,” <i>Journal of Combinatorial Theory Series B</i>, vol. 176. Elsevier,
    pp. 254–267, 2026.
  ista: Christoph M, Nenadov R, Petrova KH. 2026. The Hamilton space of pseudorandom
    graphs. Journal of Combinatorial Theory Series B. 176, 254–267.
  mla: Christoph, Micha, et al. “The Hamilton Space of Pseudorandom Graphs.” <i>Journal
    of Combinatorial Theory Series B</i>, vol. 176, Elsevier, 2026, pp. 254–67, doi:<a
    href="https://doi.org/10.1016/j.jctb.2025.09.002">10.1016/j.jctb.2025.09.002</a>.
  short: M. Christoph, R. Nenadov, K.H. Petrova, Journal of Combinatorial Theory Series
    B 176 (2026) 254–267.
corr_author: '1'
date_created: 2025-10-05T22:01:34Z
date_published: 2026-01-01T00:00:00Z
date_updated: 2026-01-05T13:29:52Z
day: '01'
ddc:
- '510'
department:
- _id: MaKw
doi: 10.1016/j.jctb.2025.09.002
ec_funded: 1
external_id:
  arxiv:
  - '2402.01447'
  isi:
  - '001585783400001'
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  date_updated: 2026-01-05T13:29:34Z
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  file_size: 688924
  relation: main_file
  success: 1
file_date_updated: 2026-01-05T13:29:34Z
fulldoi: https://doi.org/10.1016/j.jctb.2025.09.002
has_accepted_license: '1'
intvolume: '       176'
isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 254-267
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: Journal of Combinatorial Theory Series B
publication_identifier:
  eissn:
  - 1096-0902
  issn:
  - 0095-8956
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: The Hamilton space of pseudorandom graphs
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 176
year: '2026'
...
---
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_id: '20456'
abstract:
- lang: eng
  text: Given a locally finite set A⊆Rd and a coloring χ:A→{0,1,…,s}, we introduce
    the chromatic Delaunay mosaic of χ, which is a Delaunay mosaic in Rs+d that represents
    how points of different colors mingle. Our main results are bounds on the size
    of the chromatic Delaunay mosaic, in which we assume that d and s are constants.
    For example, if A is finite with n=#A, and the coloring is random, then the chromatic
    Delaunay mosaic has O(n⌈d/2⌉) cells in expectation. In contrast, for Delone sets
    and Poisson point processes in Rd, the expected number of cells within a closed
    ball is only a constant times the number of points in this ball. Furthermore,
    in R2 all colorings of a dense set of n points have chromatic Delaunay mosaics
    of size O(n). This encourages the use of chromatic Delaunay mosaics in applications.
acknowledgement: The fourth author thanks Boris Aronov for insightful discussions
  on the size of the overlay of Voronoi tessellations. Open access funding provided
  by Institute of Science and Technology (IST Austria). This project has received
  funding from the European Research Council (ERC) under the European Union’s Horizon
  2020 research and innovation programme, grant no. 788183, from the Wittgenstein
  Prize, Austrian Science Fund (FWF), grant no. Z 342-N31, and from the DFG Collaborative
  Research Center TRR 109, ‘Discretization in Geometry and Dynamics’, Austrian Science
  Fund (FWF), grant no. I 02979-N35.
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Ranita
  full_name: Biswas, Ranita
  id: 3C2B033E-F248-11E8-B48F-1D18A9856A87
  last_name: Biswas
  orcid: 0000-0002-5372-7890
- first_name: Sebastiano
  full_name: Cultrera di Montesano, Sebastiano
  id: 34D2A09C-F248-11E8-B48F-1D18A9856A87
  last_name: Cultrera di Montesano
  orcid: 0000-0001-6249-0832
- first_name: Ondrej
  full_name: Draganov, Ondrej
  id: 2B23F01E-F248-11E8-B48F-1D18A9856A87
  last_name: Draganov
  orcid: 0000-0003-0464-3823
- first_name: Herbert
  full_name: Edelsbrunner, Herbert
  id: 3FB178DA-F248-11E8-B48F-1D18A9856A87
  last_name: Edelsbrunner
  orcid: 0000-0002-9823-6833
- first_name: Morteza
  full_name: Saghafian, Morteza
  id: f86f7148-b140-11ec-9577-95435b8df824
  last_name: Saghafian
citation:
  ama: Biswas R, Cultrera di Montesano S, Draganov O, Edelsbrunner H, Saghafian M.
    On the size of chromatic Delaunay mosaics. <i>Discrete and Computational Geometry</i>.
    2026;75:24-47. doi:<a href="https://doi.org/10.1007/s00454-025-00778-7">10.1007/s00454-025-00778-7</a>
  apa: Biswas, R., Cultrera di Montesano, S., Draganov, O., Edelsbrunner, H., &#38;
    Saghafian, M. (2026). On the size of chromatic Delaunay mosaics. <i>Discrete and
    Computational Geometry</i>. Springer Nature. <a href="https://doi.org/10.1007/s00454-025-00778-7">https://doi.org/10.1007/s00454-025-00778-7</a>
  chicago: Biswas, Ranita, Sebastiano Cultrera di Montesano, Ondrej Draganov, Herbert
    Edelsbrunner, and Morteza Saghafian. “On the Size of Chromatic Delaunay Mosaics.”
    <i>Discrete and Computational Geometry</i>. Springer Nature, 2026. <a href="https://doi.org/10.1007/s00454-025-00778-7">https://doi.org/10.1007/s00454-025-00778-7</a>.
  ieee: R. Biswas, S. Cultrera di Montesano, O. Draganov, H. Edelsbrunner, and M.
    Saghafian, “On the size of chromatic Delaunay mosaics,” <i>Discrete and Computational
    Geometry</i>, vol. 75. Springer Nature, pp. 24–47, 2026.
  ista: Biswas R, Cultrera di Montesano S, Draganov O, Edelsbrunner H, Saghafian M.
    2026. On the size of chromatic Delaunay mosaics. Discrete and Computational Geometry.
    75, 24–47.
  mla: Biswas, Ranita, et al. “On the Size of Chromatic Delaunay Mosaics.” <i>Discrete
    and Computational Geometry</i>, vol. 75, Springer Nature, 2026, pp. 24–47, doi:<a
    href="https://doi.org/10.1007/s00454-025-00778-7">10.1007/s00454-025-00778-7</a>.
  short: R. Biswas, S. Cultrera di Montesano, O. Draganov, H. Edelsbrunner, M. Saghafian,
    Discrete and Computational Geometry 75 (2026) 24–47.
corr_author: '1'
date_created: 2025-10-12T22:01:26Z
date_published: 2026-01-01T00:00:00Z
date_updated: 2026-01-05T13:21:56Z
day: '01'
ddc:
- '510'
department:
- _id: HeEd
doi: 10.1007/s00454-025-00778-7
ec_funded: 1
external_id:
  arxiv:
  - '2212.03121'
  isi:
  - '001584166900001'
file:
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isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 24-47
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  call_identifier: H2020
  grant_number: '788183'
  name: Alpha Shape Theory Extended
- _id: 268116B8-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: Z00342
  name: Mathematics, Computer Science
- _id: 2561EBF4-B435-11E9-9278-68D0E5697425
  call_identifier: FWF
  grant_number: I02979-N35
  name: Persistence and stability of geometric complexes
publication: Discrete and Computational Geometry
publication_identifier:
  eissn:
  - 1432-0444
  issn:
  - 0179-5376
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
related_material:
  record:
  - id: '15090'
    relation: earlier_version
    status: public
scopus_import: '1'
status: public
title: On the size of chromatic Delaunay mosaics
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 75
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '20482'
abstract:
- lang: eng
  text: 'In his study of graph codes, Alon introduced the concept of the odd-Ramsey
    number of a family of graphs H in Kn, defined as the minimum number of colours
    needed to colour the edges of K so that every copy of a graph H E H intersects
    some colour class in an odd number of edges. In this paper, we focus on complete
    bipartite graphs. First, we completely resolve the problem when H is the family
    of all spanning complete bipartite graphs on n vertices. We then focus on its
    subfamilies, that is, {Kt,n-t : t E T} for a fixed set of integers T c [[n/2]].
    We prove that the odd-Ramsey problem is equivalent to determining the maximum
    dimension of a linear binary code avoiding codewords of given weights, and leverage
    known results from coding theory to deduce asymptotically tight bounds in our
    setting. We conclude with bounds for the odd-Ramsey numbers of fixed (that is,
    non-spanning) complete bipartite subgraphs.'
acknowledgement: "The authors would like to thank Gilles Zémor for a helpful clarification
  on [3], Deepak Bal and Patrick Bennett for bringing [25] to their attention, and
  both referees for several helpful comments.\r\nS.B.: Most of this research was conducted
  while the author was at the School of Mathematics, University of Birmingham, Birmingham,
  United Kingdom. The research leading to these results was supported by EPSRC, United
  Kingdom, grant no. EP/V048287/1 and by ERC Advanced Grants “GeoScape”, no. 882971
  and “ERMiD”, no. 101054936. There are no additional data beyond that contained within
  the main manuscript.\r\nS.D.: Research supported by Taiwan NSTC grants 111-2115-M-002-009-MY2
  and 113-2628-M-002-008-MY4.\r\nK.P.: This project has received funding from the
  European Union’s Horizon 2020 research and innovation programme under the Marie
  Skłodowska-Curie grant agreement No 101034413. Parts of this research was conducted
  while K.P. was at the Department of Computer Science, ETH Zürich, Switzerland, supported
  by Swiss National Science Foundation, Switzerland , grant no. CRSII5 173721."
article_number: '104235'
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Simona
  full_name: Boyadzhiyska, Simona
  last_name: Boyadzhiyska
- first_name: Shagnik
  full_name: Das, Shagnik
  last_name: Das
- first_name: Thomas
  full_name: Lesgourgues, Thomas
  last_name: Lesgourgues
- first_name: Kalina H
  full_name: Petrova, Kalina H
  id: 554ff4e4-f325-11ee-b0c4-a10dbd523381
  last_name: Petrova
citation:
  ama: Boyadzhiyska S, Das S, Lesgourgues T, Petrova KH. Odd-Ramsey numbers of complete
    bipartite graphs. <i>European Journal of Combinatorics</i>. 2026;131. doi:<a href="https://doi.org/10.1016/j.ejc.2025.104235">10.1016/j.ejc.2025.104235</a>
  apa: Boyadzhiyska, S., Das, S., Lesgourgues, T., &#38; Petrova, K. H. (2026). Odd-Ramsey
    numbers of complete bipartite graphs. <i>European Journal of Combinatorics</i>.
    Elsevier. <a href="https://doi.org/10.1016/j.ejc.2025.104235">https://doi.org/10.1016/j.ejc.2025.104235</a>
  chicago: Boyadzhiyska, Simona, Shagnik Das, Thomas Lesgourgues, and Kalina H Petrova.
    “Odd-Ramsey Numbers of Complete Bipartite Graphs.” <i>European Journal of Combinatorics</i>.
    Elsevier, 2026. <a href="https://doi.org/10.1016/j.ejc.2025.104235">https://doi.org/10.1016/j.ejc.2025.104235</a>.
  ieee: S. Boyadzhiyska, S. Das, T. Lesgourgues, and K. H. Petrova, “Odd-Ramsey numbers
    of complete bipartite graphs,” <i>European Journal of Combinatorics</i>, vol.
    131. Elsevier, 2026.
  ista: Boyadzhiyska S, Das S, Lesgourgues T, Petrova KH. 2026. Odd-Ramsey numbers
    of complete bipartite graphs. European Journal of Combinatorics. 131, 104235.
  mla: Boyadzhiyska, Simona, et al. “Odd-Ramsey Numbers of Complete Bipartite Graphs.”
    <i>European Journal of Combinatorics</i>, vol. 131, 104235, Elsevier, 2026, doi:<a
    href="https://doi.org/10.1016/j.ejc.2025.104235">10.1016/j.ejc.2025.104235</a>.
  short: S. Boyadzhiyska, S. Das, T. Lesgourgues, K.H. Petrova, European Journal of
    Combinatorics 131 (2026).
corr_author: '1'
date_created: 2025-10-16T13:14:34Z
date_published: 2026-01-01T00:00:00Z
date_updated: 2026-01-05T13:34:48Z
day: '01'
ddc:
- '500'
department:
- _id: MaKw
doi: 10.1016/j.ejc.2025.104235
ec_funded: 1
external_id:
  arxiv:
  - '2410.05887'
  isi:
  - '001573380700001'
file:
- access_level: open_access
  checksum: 52883daa217398396cbf9b8ad9ddae92
  content_type: application/pdf
  creator: dernst
  date_created: 2026-01-05T13:34:40Z
  date_updated: 2026-01-05T13:34:40Z
  file_id: '20954'
  file_name: 2026_EuropJourCombinatorics_Boyadzhiyska.pdf
  file_size: 563029
  relation: main_file
  success: 1
file_date_updated: 2026-01-05T13:34:40Z
fulldoi: https://doi.org/10.1016/j.ejc.2025.104235
has_accepted_license: '1'
intvolume: '       131'
isi: 1
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
project:
- _id: fc2ed2f7-9c52-11eb-aca3-c01059dda49c
  call_identifier: H2020
  grant_number: '101034413'
  name: 'IST-BRIDGE: International postdoctoral program'
publication: European Journal of Combinatorics
publication_identifier:
  issn:
  - 0195-6698
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Odd-Ramsey numbers of complete bipartite graphs
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 131
year: '2026'
...
---
OA_place: repository
OA_type: green
_id: '22103'
abstract:
- lang: eng
  text: "Modern AI systems increasingly rely on opaque, highly complex models whose
    inner workings remain inaccessible even to experts. This opacity creates challenges
    for trust, accountability, and compliance with\r\nemerging regulatory expectations
    such as the “right to an explanation”. While traditional explainability methods—feature
    attributions, counterfactuals, surrogate models—and interpretable model classes
    provide valuable insights for engineers, they often fall short of delivering the
    contextual, conversational explanations that\r\nreal users expect. Large Language
    Models (LLMs) offer a promising new avenue for explanation due to their\r\nability
    to engage interactively, adapt to user needs, and translate technical outputs
    into more accessible reasoning. However, their tendencies toward hallucination,
    conflict avoidance, and oversimplification introduce\r\nserious risks when used
    as explanatory agents. This paper analyzes these opportunities and limitations,
    examines verification strategies for ensuring explanation fidelity, and situates
    LLM-generated explanations within\r\nbroader concerns about public trust. The
    paper concludes by outlining best practices and future research directions for
    building robust, verifiable, and human-aligned explanation systems."
acknowledgement: "This work has been supported by the European Research Council under
  Grant No.: ERC-2020-AdG\r\n101020093. LLM–based tools have been used as\r\nwriting
  assistance to help improve presentation.\r\n"
article_processing_charge: No
author:
- first_name: Filip
  full_name: Cano Cordoba, Filip
  id: 708cad98-e86a-11ef-8098-bdae2d7c6af1
  last_name: Cano Cordoba
  orcid: 0000-0002-0783-904X
citation:
  ama: 'Cano Cordoba F. Explaining decisions one conversation at a time: Opportunities
    and risks of LLMs as explainability assistants. In: <i>Proceedings of the 18th
    International Conference on Agents and Artificial Intelligence</i>. Vol 5. Science
    and Technology Publications; 2026:4689-4696. doi:<a href="https://doi.org/10.5220/0014483200004052">10.5220/0014483200004052</a>'
  apa: 'Cano Cordoba, F. (2026). Explaining decisions one conversation at a time:
    Opportunities and risks of LLMs as explainability assistants. In <i>Proceedings
    of the 18th International Conference on Agents and Artificial Intelligence</i>
    (Vol. 5, pp. 4689–4696). Marbella, Spain: Science and Technology Publications.
    <a href="https://doi.org/10.5220/0014483200004052">https://doi.org/10.5220/0014483200004052</a>'
  chicago: 'Cano Cordoba, Filip. “Explaining Decisions One Conversation at a Time:
    Opportunities and Risks of LLMs as Explainability Assistants.” In <i>Proceedings
    of the 18th International Conference on Agents and Artificial Intelligence</i>,
    5:4689–96. Science and Technology Publications, 2026. <a href="https://doi.org/10.5220/0014483200004052">https://doi.org/10.5220/0014483200004052</a>.'
  ieee: 'F. Cano Cordoba, “Explaining decisions one conversation at a time: Opportunities
    and risks of LLMs as explainability assistants,” in <i>Proceedings of the 18th
    International Conference on Agents and Artificial Intelligence</i>, Marbella,
    Spain, 2026, vol. 5, pp. 4689–4696.'
  ista: 'Cano Cordoba F. 2026. Explaining decisions one conversation at a time: Opportunities
    and risks of LLMs as explainability assistants. Proceedings of the 18th International
    Conference on Agents and Artificial Intelligence. ICAART: International Conference
    on Agents and Artificial Intelligence vol. 5, 4689–4696.'
  mla: 'Cano Cordoba, Filip. “Explaining Decisions One Conversation at a Time: Opportunities
    and Risks of LLMs as Explainability Assistants.” <i>Proceedings of the 18th International
    Conference on Agents and Artificial Intelligence</i>, vol. 5, Science and Technology
    Publications, 2026, pp. 4689–96, doi:<a href="https://doi.org/10.5220/0014483200004052">10.5220/0014483200004052</a>.'
  short: F. Cano Cordoba, in:, Proceedings of the 18th International Conference on
    Agents and Artificial Intelligence, Science and Technology Publications, 2026,
    pp. 4689–4696.
conference:
  end_date: 2026-03-08
  location: Marbella, Spain
  name: 'ICAART: International Conference on Agents and Artificial Intelligence'
  start_date: 2026-03-05
corr_author: '1'
das_tickbox: '0'
date_created: 2026-06-21T22:03:00Z
date_published: 2026-04-01T00:00:00Z
date_updated: 2026-06-24T08:37:00Z
day: '01'
department:
- _id: ToHe
doi: 10.5220/0014483200004052
ec_funded: 1
fulldoi: https://doi.org/10.5220/0014483200004052
intvolume: '         5'
keyword:
- Explainable AI
- Large Language Models
- Trust in AI
language:
- iso: eng
main_file_link:
- open_access: '1'
  url: https://filipcano.org/files/icaart26llm.pdf
month: '04'
oa: 1
oa_version: Accepted Version
page: 4689-4696
project:
- _id: 62781420-2b32-11ec-9570-8d9b63373d4d
  call_identifier: H2020
  grant_number: '101020093'
  name: Vigilant Algorithmic Monitoring of Software
publication: Proceedings of the 18th International Conference on Agents and Artificial
  Intelligence
publication_identifier:
  eissn:
  - 2184-433X
  isbn:
  - '9789897587962'
  issn:
  - 2184-3589
publication_status: published
publisher: Science and Technology Publications
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: 'Explaining decisions one conversation at a time: Opportunities and risks of
  LLMs as explainability assistants'
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 5
year: '2026'
...
---
OA_place: publisher
OA_type: gold
_id: '21437'
abstract:
- lang: eng
  text: Altermagnets are a class of collinear magnets that exhibit non-relativistic
    spin splitting (NRSS) of electronic bands in the absence of net magnetization.
    Their potential to generate large spin polarization without spin-orbit coupling
    has created strong interest in probes that access the underlying order parameter
    directly. In this Perspective, we show that linear magneto-birefringence (LMB)
    provides a natural and broadly applicable route to detecting altermagnetic order.
    Building on the correspondence between the momentum-space structure of NRSS and
    the ferroic ordering of magnetic multipoles in real space, we demonstrate how
    $d$-wave and $g$-wave NRSS textures yield distinct LMB responses. We present a
    symmetry-based framework that identifies the optical geometries and field configurations
    required to isolate specific multipole components, enabling domain imaging and
    providing benchmarks for theoretical models of LMB.
acknowledgement: We thank Nicola Spaldin and Marc Vila for valuable discussions. J.O.
  received support from the Quantum Materials (KC2202) program under the U.S. Department
  of Energy, Office of Science, Office of Basic Energy Sciences, Materials Sciences
  and Engineering Division under Contract No. DE-AC02-05CH11231, and the Gordon and
  Betty Moore Foundation's EPiQS Initiative through Grant GBMF4537 to J.O. at UC Berkeley.
article_processing_charge: Yes
article_type: original
arxiv: 1
author:
- first_name: Veronika
  full_name: Sunko, Veronika
  id: 23cb1cf6-2c7a-11ef-91a4-f72fc19f20b3
  last_name: Sunko
  orcid: 0000-0003-2724-3523
- first_name: J.
  full_name: Orenstein, J.
  last_name: Orenstein
citation:
  ama: Sunko V, Orenstein J. Linear magneto-birefringence as a probe of altermagnetism.
    <i>npj Quantum Materials</i>. 2026. doi:<a href="https://doi.org/10.1038/s41535-026-00901-8">10.1038/s41535-026-00901-8</a>
  apa: Sunko, V., &#38; Orenstein, J. (2026). Linear magneto-birefringence as a probe
    of altermagnetism. <i>Npj Quantum Materials</i>. Springer Nature. <a href="https://doi.org/10.1038/s41535-026-00901-8">https://doi.org/10.1038/s41535-026-00901-8</a>
  chicago: Sunko, Veronika, and J. Orenstein. “Linear Magneto-Birefringence as a Probe
    of Altermagnetism.” <i>Npj Quantum Materials</i>. Springer Nature, 2026. <a href="https://doi.org/10.1038/s41535-026-00901-8">https://doi.org/10.1038/s41535-026-00901-8</a>.
  ieee: V. Sunko and J. Orenstein, “Linear magneto-birefringence as a probe of altermagnetism,”
    <i>npj Quantum Materials</i>. Springer Nature, 2026.
  ista: Sunko V, Orenstein J. 2026. Linear magneto-birefringence as a probe of altermagnetism.
    npj Quantum Materials.
  mla: Sunko, Veronika, and J. Orenstein. “Linear Magneto-Birefringence as a Probe
    of Altermagnetism.” <i>Npj Quantum Materials</i>, Springer Nature, 2026, doi:<a
    href="https://doi.org/10.1038/s41535-026-00901-8">10.1038/s41535-026-00901-8</a>.
  short: V. Sunko, J. Orenstein, Npj Quantum Materials (2026).
corr_author: '1'
date_created: 2026-03-11T10:40:08Z
date_published: 2026-05-30T00:00:00Z
date_updated: 2026-06-24T10:31:05Z
day: '30'
ddc:
- '530'
department:
- _id: VeSu
doi: 10.1038/s41535-026-00901-8
external_id:
  arxiv:
  - '2511.16421'
fulldoi: https://doi.org/10.1038/s41535-026-00901-8
has_accepted_license: '1'
language:
- iso: eng
license: https://creativecommons.org/licenses/by-nc-nd/4.0/
main_file_link:
- open_access: '1'
  url: https://doi.org/10.1038/s41535-026-00901-8
month: '05'
oa: 1
oa_version: Published Version
publication: npj Quantum Materials
publication_identifier:
  eissn:
  - 2397-4648
publication_status: epub_ahead
publisher: Springer Nature
status: public
title: Linear magneto-birefringence as a probe of altermagnetism
tmp:
  image: /images/cc_by_nc_nd.png
  legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
  name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
    (CC BY-NC-ND 4.0)
  short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '22145'
abstract:
- lang: eng
  text: An in-operando electro-intercalation method for the on-chip synthesis of alkali-metal-intercalated
    materials and their Raman spectroscopic and transport characterization in ultrahigh
    vacuum (UHV) is developed. We apply this method to synthesize fulleride superconductors
    via Rb+ intercalation into a C60 film. During the intercalation, we monitor the
    stoichiometry via UHV-Raman spectroscopy and probe superconductivity via transport
    measurements. An increase of the superconducting transition temperature from 7.0
    K to 14.5 K is observed when the stoichiometry is tuned from Rb2.7C60 to Rb3C60.
    In our experiment, an ionic Rb+ flux into the host material is induced by an applied
    electronic current via a Butler–Volmer-type mechanism. Electro-intercalation captivates
    through improved stoichiometric precision, the ability to smoothly vary stoichiometry
    via duration of current application, and the absence of a lower limit of the volume
    of the host material. It represents a powerful concept for the on-chip synthesis
    of intercalated materials, battery research, and beyond.
acknowledgement: 'A.G. and K.P.S. acknowledge the DFG through CRC 1238 (277146847,
  A01) and DFG project SE 2575. K.P.S., P.S., and A.G. would like to thank the Center
  for Micro- and Nanostructures (ZMNS) for providing the cleanroom facilities. K.P.S.
  thanks Daniele Nazari for help with ALD of Al2O3 films. Financial support from FFG
  Austria (CrystalGate) is acknowledged. A.G. thanks John Weaver for discussions about
  the structure of RbxC60. B.C. acknowledges support from the NOMIS Foundation. First-principles
  simulations were supported as part of user project CNMS2025-R-03182 at the Center
  for Nanophase Materials Sciences (CNMS), which is a US Department of Energy, Office
  of Science User Facility at Oak Ridge National Laboratory. J.J. and J.H. acknowledge
  the computational resources provided by the ACCESS (Advanced Cyberinfrastructure
  Coordination Ecosystem: Services & Support) program through allocation TG-DMR110037;
  the National Energy Research Scientific Computing Center (NERSC), a DOE Office of
  Science User Facility supported under Contract No. DE-AC02-05CH11231, through NERSC
  award BES-ERCAP0031261; and the Compute and Data Environment for Science (CADES)
  Baseline at Oak Ridge National Laboratory, supported by the Office of Science of
  the U.S. Department of Energy under Contract No. DE-AC05-00OR22725. The authors
  acknowledge TU Wien Bibliothek for financial support through its Open access funding
  provided by Technische Universitat Wien.'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Konstantin P.
  full_name: Shchukin, Konstantin P.
  last_name: Shchukin
- first_name: Oliver N.
  full_name: Gallego Lacey, Oliver N.
  last_name: Gallego Lacey
- first_name: Baptiste
  full_name: Coquinot, Baptiste
  id: f8417bd4-f599-11ee-a482-b927e3ed1e8e
  last_name: Coquinot
  orcid: 0000-0001-5524-596X
- first_name: Jacek
  full_name: Jakowski, Jacek
  last_name: Jakowski
- first_name: Jingsong
  full_name: Huang, Jingsong
  last_name: Huang
- first_name: Patrik
  full_name: Staudenmayer, Patrik
  last_name: Staudenmayer
- first_name: Yannic
  full_name: Falke, Yannic
  last_name: Falke
- first_name: Ram Prakash
  full_name: Pandeya, Ram Prakash
  last_name: Pandeya
- first_name: Alexander
  full_name: Grüneis, Alexander
  last_name: Grüneis
citation:
  ama: Shchukin KP, Gallego Lacey ON, Coquinot B, et al. On-chip tuning of superconductivity
    in fullerides via current-driven Rb+ intercalation. <i>ACS Nano</i>. 2026;20(24):17360-17372.
    doi:<a href="https://doi.org/10.1021/acsnano.6c02466">10.1021/acsnano.6c02466</a>
  apa: Shchukin, K. P., Gallego Lacey, O. N., Coquinot, B., Jakowski, J., Huang, J.,
    Staudenmayer, P., … Grüneis, A. (2026). On-chip tuning of superconductivity in
    fullerides via current-driven Rb+ intercalation. <i>ACS Nano</i>. American Chemical
    Society. <a href="https://doi.org/10.1021/acsnano.6c02466">https://doi.org/10.1021/acsnano.6c02466</a>
  chicago: Shchukin, Konstantin P., Oliver N. Gallego Lacey, Baptiste Coquinot, Jacek
    Jakowski, Jingsong Huang, Patrik Staudenmayer, Yannic Falke, Ram Prakash Pandeya,
    and Alexander Grüneis. “On-Chip Tuning of Superconductivity in Fullerides via
    Current-Driven Rb+ Intercalation.” <i>ACS Nano</i>. American Chemical Society,
    2026. <a href="https://doi.org/10.1021/acsnano.6c02466">https://doi.org/10.1021/acsnano.6c02466</a>.
  ieee: K. P. Shchukin <i>et al.</i>, “On-chip tuning of superconductivity in fullerides
    via current-driven Rb+ intercalation,” <i>ACS Nano</i>, vol. 20, no. 24. American
    Chemical Society, pp. 17360–17372, 2026.
  ista: Shchukin KP, Gallego Lacey ON, Coquinot B, Jakowski J, Huang J, Staudenmayer
    P, Falke Y, Pandeya RP, Grüneis A. 2026. On-chip tuning of superconductivity in
    fullerides via current-driven Rb+ intercalation. ACS Nano. 20(24), 17360–17372.
  mla: Shchukin, Konstantin P., et al. “On-Chip Tuning of Superconductivity in Fullerides
    via Current-Driven Rb+ Intercalation.” <i>ACS Nano</i>, vol. 20, no. 24, American
    Chemical Society, 2026, pp. 17360–72, doi:<a href="https://doi.org/10.1021/acsnano.6c02466">10.1021/acsnano.6c02466</a>.
  short: K.P. Shchukin, O.N. Gallego Lacey, B. Coquinot, J. Jakowski, J. Huang, P.
    Staudenmayer, Y. Falke, R.P. Pandeya, A. Grüneis, ACS Nano 20 (2026) 17360–17372.
das_tickbox: '0'
date_created: 2026-06-28T22:01:34Z
date_published: 2026-06-23T00:00:00Z
date_updated: 2026-06-29T09:00:33Z
day: '23'
ddc:
- '530'
department:
- _id: MiLe
doi: 10.1021/acsnano.6c02466
external_id:
  pmid:
  - '42260723'
file:
- access_level: open_access
  checksum: 01ec8ee6fab7bf563df7af13f6b43045
  content_type: application/pdf
  creator: dernst
  date_created: 2026-06-29T08:58:12Z
  date_updated: 2026-06-29T08:58:12Z
  file_id: '22150'
  file_name: 2026_ACSNano_Shchukin.pdf
  file_size: 6290296
  relation: main_file
  success: 1
file_date_updated: 2026-06-29T08:58:12Z
fulldoi: https://doi.org/10.1021/acsnano.6c02466
has_accepted_license: '1'
intvolume: '        20'
issue: '24'
keyword:
- fulleride
- intercalation
- alkali metal
- superconductivity
- Raman
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
page: 17360-17372
pmid: 1
publication: ACS Nano
publication_identifier:
  eissn:
  - 1936-086X
  issn:
  - 1936-0851
publication_status: published
publisher: American Chemical Society
quality_controlled: '1'
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supplementarymaterial: yes
title: On-chip tuning of superconductivity in fullerides via current-driven Rb+ intercalation
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year: '2026'
...
---
OA_type: closed access
_id: '22144'
abstract:
- lang: eng
  text: Most cells polarize and migrate in response to electrical fields. In this
    issue of Cell, Belliveau et al. identify TMEM154/Galvanin, a receptor that serves
    as a cellular antenna to sense electrical gradients and guide migration toward
    the cathode.
article_processing_charge: No
article_type: comment
author:
- first_name: Michael
  full_name: Riedl, Michael
  id: 3BE60946-F248-11E8-B48F-1D18A9856A87
  last_name: Riedl
  orcid: 0000-0003-4844-6311
- first_name: Michael K
  full_name: Sixt, Michael K
  id: 41E9FBEA-F248-11E8-B48F-1D18A9856A87
  last_name: Sixt
  orcid: 0000-0002-6620-9179
citation:
  ama: Riedl M, Sixt MK. A new sense for electrical fields. <i>Cell</i>. 2026;189(13):3845-3846.
    doi:<a href="https://doi.org/10.1016/j.cell.2026.05.038">10.1016/j.cell.2026.05.038</a>
  apa: Riedl, M., &#38; Sixt, M. K. (2026). A new sense for electrical fields. <i>Cell</i>.
    Elsevier. <a href="https://doi.org/10.1016/j.cell.2026.05.038">https://doi.org/10.1016/j.cell.2026.05.038</a>
  chicago: Riedl, Michael, and Michael K Sixt. “A New Sense for Electrical Fields.”
    <i>Cell</i>. Elsevier, 2026. <a href="https://doi.org/10.1016/j.cell.2026.05.038">https://doi.org/10.1016/j.cell.2026.05.038</a>.
  ieee: M. Riedl and M. K. Sixt, “A new sense for electrical fields,” <i>Cell</i>,
    vol. 189, no. 13. Elsevier, pp. 3845–3846, 2026.
  ista: Riedl M, Sixt MK. 2026. A new sense for electrical fields. Cell. 189(13),
    3845–3846.
  mla: Riedl, Michael, and Michael K. Sixt. “A New Sense for Electrical Fields.” <i>Cell</i>,
    vol. 189, no. 13, Elsevier, 2026, pp. 3845–46, doi:<a href="https://doi.org/10.1016/j.cell.2026.05.038">10.1016/j.cell.2026.05.038</a>.
  short: M. Riedl, M.K. Sixt, Cell 189 (2026) 3845–3846.
corr_author: '1'
das_tickbox: '0'
date_created: 2026-06-28T22:01:34Z
date_published: 2026-06-25T00:00:00Z
date_updated: 2026-06-29T09:04:49Z
day: '25'
department:
- _id: MiSi
doi: 10.1016/j.cell.2026.05.038
fulldoi: https://doi.org/10.1016/j.cell.2026.05.038
intvolume: '       189'
issue: '13'
language:
- iso: eng
month: '06'
oa_version: None
page: 3845-3846
publication: Cell
publication_identifier:
  eissn:
  - 1097-4172
  issn:
  - 0092-8674
publication_status: published
publisher: Elsevier
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: A new sense for electrical fields
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 189
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '22147'
abstract:
- lang: eng
  text: "Let 1 ≤ k ≤ n and M be a random n × n matrix with independent uniformly random
    {±1}-entries. We\r\nshow that there exists an absolute constant c > 0 such that\r\nP[rank(M)
    ≤ n − k] ≤ exp(−cnk).\r\nThis confirms a well-known prediction in the area, extending
    a result of Rudelson (who previously\r\nproved this same result under the restriction
    k ≤ √n, via different methods)."
acknowledgement: "Z.H. was supported by SNSF grant 200021-228014. M.K. was supported
  by ERC Starting Grant “RANDSTRUCT” No. 101076777. L.S. was supported by the Deutsche
  Forschungsgemeinschaft (DFG, German\r\nResearch Foundation)—CRC 1720–539309657.
  This research was conducted during the period M.S. served\r\nas a Clay Research
  Fellow. This work began when the authors were visiting Mathematisches Forschungsinstitut
  Oberwolfach, which\r\nprovided ideal working conditions. M.S. thanks Vishesh Jain
  for initial discussions regarding the problem.\r\nWe also thank the anonymous referee
  for helpful comments."
article_number: rnag126
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Zach
  full_name: Hunter, Zach
  last_name: Hunter
- first_name: Matthew Alan
  full_name: Kwan, Matthew Alan
  id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
  last_name: Kwan
  orcid: 0000-0002-4003-7567
- first_name: Lisa
  full_name: Sauermann, Lisa
  last_name: Sauermann
- first_name: Mehtaab
  full_name: Sawhney, Mehtaab
  last_name: Sawhney
citation:
  ama: Hunter Z, Kwan MA, Sauermann L, Sawhney M. On random matrices with large corank.
    <i>International Mathematics Research Notices</i>. 2026;2026(12). doi:<a href="https://doi.org/10.1093/imrn/rnag126">10.1093/imrn/rnag126</a>
  apa: Hunter, Z., Kwan, M. A., Sauermann, L., &#38; Sawhney, M. (2026). On random
    matrices with large corank. <i>International Mathematics Research Notices</i>.
    Oxford University Press. <a href="https://doi.org/10.1093/imrn/rnag126">https://doi.org/10.1093/imrn/rnag126</a>
  chicago: Hunter, Zach, Matthew Alan Kwan, Lisa Sauermann, and Mehtaab Sawhney. “On
    Random Matrices with Large Corank.” <i>International Mathematics Research Notices</i>.
    Oxford University Press, 2026. <a href="https://doi.org/10.1093/imrn/rnag126">https://doi.org/10.1093/imrn/rnag126</a>.
  ieee: Z. Hunter, M. A. Kwan, L. Sauermann, and M. Sawhney, “On random matrices with
    large corank,” <i>International Mathematics Research Notices</i>, vol. 2026, no.
    12. Oxford University Press, 2026.
  ista: Hunter Z, Kwan MA, Sauermann L, Sawhney M. 2026. On random matrices with large
    corank. International Mathematics Research Notices. 2026(12), rnag126.
  mla: Hunter, Zach, et al. “On Random Matrices with Large Corank.” <i>International
    Mathematics Research Notices</i>, vol. 2026, no. 12, rnag126, Oxford University
    Press, 2026, doi:<a href="https://doi.org/10.1093/imrn/rnag126">10.1093/imrn/rnag126</a>.
  short: Z. Hunter, M.A. Kwan, L. Sauermann, M. Sawhney, International Mathematics
    Research Notices 2026 (2026).
corr_author: '1'
das_tickbox: '0'
date_created: 2026-06-28T22:01:35Z
date_published: 2026-06-01T00:00:00Z
date_updated: 2026-06-29T09:19:14Z
day: '01'
ddc:
- '500'
department:
- _id: MaKw
doi: 10.1093/imrn/rnag126
external_id:
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publication: International Mathematics Research Notices
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publication_status: published
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supplementarymaterial: no
title: On random matrices with large corank
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  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
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...
---
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abstract:
- lang: eng
  text: Hippocampal CA3 pyramidal neurons (PNs) form the largest autoassociative network
    in the mammalian brain. Whether CA3–CA3 recurrent connectivity is genetically
    preconfigured or environmentally shaped during ongoing memory storage is currently
    unknown. To address this question, we performed multicellular patch-clamp-based
    circuit mapping of up to eight CA3 PNs in the mouse hippocampus at multiple postnatal
    time points (P7–8, P18–25, and P45–50). Here, we show that the hippocampal CA3
    network undergoes a developmental transformation from local, dense, and random
    connectivity to a distributed, sparse, and structured configuration. Thus, sparse
    and structured connectivity may emerge via experience-dependent mechanisms. In
    parallel, the strength of single synapses is downregulated; single synaptic events
    are sufficient to trigger postsynaptic spiking early in development, whereas spatial
    summation of several inputs is required at later time points. Biologically inspired
    models of memory storage by Hebbian synaptic plasticity and retrieval via pattern
    completion suggest that developmental changes improve specific aspects of memory
    storage and retrieval. Our results imply a developmental transformation of the
    neuronal code and the memory functions in the hippocampal CA3 network.</jats:p>
acknowledged_ssus:
- _id: PreCl
- _id: Bio
- _id: M-Shop
- _id: ScienComp
acknowledgement: 'We thank Jose Guzman, Simon Hippenmeyer, and Tim Vogels for critically
  reading the manuscript, Jozsef Csicsvari for useful discussions, Florian Marr for
  technical assistance, and Eleftheria Kralli-Beller for manuscript editing. This
  research was supported by the Scientific Services Units (SSUs) of ISTA: the preclinical
  facility (PCF) provided housing and breeding of the animals, the imaging and optics
  facility (IOF) offered technical training and state of the art equipment, the Miba
  machine shop contributed to the construction and maintenance of multicellular recording
  setups, and the scientific computing unit helped with the large-scale simulations.
  The project received funding from the European Union’s Horizon 2020 research and
  innovation programme (ERC Advanced Grants No 692692 GIANTSYN and 101199096 CA3-SYNGRAM
  to P.J.; Marie Skłodowska-Curie Grant 754411 to V.V.B.; Marie Skłodowska-Curie Grant
  101026635 to J.F.W.), the Fond zur Förderung der Wissenschaftlichen Forschung (P
  36232-B, PAT4178023, and 10.55776/CoE16 to P.J.), and the Nomis Foundation (fellowship
  to A.N.-O.). V.V.B. received funding from a CONACyT fellowship (289638).'
article_number: '5540'
article_processing_charge: Yes
article_type: original
author:
- first_name: Victor M
  full_name: Vargas Barroso, Victor M
  id: 2F55A9DE-F248-11E8-B48F-1D18A9856A87
  last_name: Vargas Barroso
- first_name: Jake
  full_name: Watson, Jake
  id: 63836096-4690-11EA-BD4E-32803DDC885E
  last_name: Watson
  orcid: 0000-0002-8698-3823
- first_name: Andrea C
  full_name: Navas Olivé, Andrea C
  id: 739d26c9-52e8-11ee-8d72-f14d3893b4ce
  last_name: Navas Olivé
  orcid: 0000-0002-9280-8597
- first_name: Alois
  full_name: Schlögl, Alois
  id: 45BF87EE-F248-11E8-B48F-1D18A9856A87
  last_name: Schlögl
  orcid: 0000-0002-5621-8100
- first_name: Peter M
  full_name: Jonas, Peter M
  id: 353C1B58-F248-11E8-B48F-1D18A9856A87
  last_name: Jonas
  orcid: 0000-0001-5001-4804
citation:
  ama: Vargas Barroso VM, Watson J, Navas Olivé AC, Schlögl A, Jonas PM. Developmental
    emergence of sparse and structured synaptic connectivity in the hippocampal CA3
    memory circuit. <i>Nature Communications</i>. 2026;17. doi:<a href="https://doi.org/10.1038/s41467-026-71914-x">10.1038/s41467-026-71914-x</a>
  apa: Vargas Barroso, V. M., Watson, J., Navas Olivé, A. C., Schlögl, A., &#38; Jonas,
    P. M. (2026). Developmental emergence of sparse and structured synaptic connectivity
    in the hippocampal CA3 memory circuit. <i>Nature Communications</i>. Springer
    Nature. <a href="https://doi.org/10.1038/s41467-026-71914-x">https://doi.org/10.1038/s41467-026-71914-x</a>
  chicago: Vargas Barroso, Victor M, Jake Watson, Andrea C Navas Olivé, Alois Schlögl,
    and Peter M Jonas. “Developmental Emergence of Sparse and Structured Synaptic
    Connectivity in the Hippocampal CA3 Memory Circuit.” <i>Nature Communications</i>.
    Springer Nature, 2026. <a href="https://doi.org/10.1038/s41467-026-71914-x">https://doi.org/10.1038/s41467-026-71914-x</a>.
  ieee: V. M. Vargas Barroso, J. Watson, A. C. Navas Olivé, A. Schlögl, and P. M.
    Jonas, “Developmental emergence of sparse and structured synaptic connectivity
    in the hippocampal CA3 memory circuit,” <i>Nature Communications</i>, vol. 17.
    Springer Nature, 2026.
  ista: Vargas Barroso VM, Watson J, Navas Olivé AC, Schlögl A, Jonas PM. 2026. Developmental
    emergence of sparse and structured synaptic connectivity in the hippocampal CA3
    memory circuit. Nature Communications. 17, 5540.
  mla: Vargas Barroso, Victor M., et al. “Developmental Emergence of Sparse and Structured
    Synaptic Connectivity in the Hippocampal CA3 Memory Circuit.” <i>Nature Communications</i>,
    vol. 17, 5540, Springer Nature, 2026, doi:<a href="https://doi.org/10.1038/s41467-026-71914-x">10.1038/s41467-026-71914-x</a>.
  short: V.M. Vargas Barroso, J. Watson, A.C. Navas Olivé, A. Schlögl, P.M. Jonas,
    Nature Communications 17 (2026).
corr_author: '1'
das_tickbox: '1'
dataavailabilitystatement: Source data are provided with this paper. Additional original
  data are available from the corresponding author upon request. Code is available
  from https://doi.org/10.15479/AT-ISTA-21442 under the link https://research-explorer.ista.ac.at/download/21442/21443/ca3simu-vargas2026v1.tar.gz
date_created: 2026-06-30T13:05:52Z
date_published: 2026-06-23T00:00:00Z
date_updated: 2026-07-01T06:47:49Z
day: '23'
ddc:
- '570'
department:
- _id: PeJo
- _id: ScienComp
doi: 10.1038/s41467-026-71914-x
ec_funded: 1
external_id:
  pmid:
  - '42014695'
file:
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has_accepted_license: '1'
intvolume: '        17'
language:
- iso: eng
month: '06'
oa: 1
oa_version: Published Version
pmid: 1
project:
- _id: 25B7EB9E-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '692692'
  name: Biophysics and circuit function of a giant cortical glutamatergic synapse
- _id: e62b56fe-ab3c-11f0-94c7-d181dd352b3b
  grant_number: '101199096'
  name: Synaptic mechanisms of engram storage and retrieval in CA3 hippocampal microcircuits
- _id: 260C2330-B435-11E9-9278-68D0E5697425
  call_identifier: H2020
  grant_number: '754411'
  name: ISTplus - Postdoctoral Fellowships
- _id: fc2be41b-9c52-11eb-aca3-faa90aa144e9
  call_identifier: H2020
  grant_number: '101026635'
  name: Synaptic computations of the hippocampal CA3 circuitry
- _id: bd88be38-d553-11ed-ba76-81d5a70a6ef5
  grant_number: P36232
  name: Mechanisms of GABA release in hippocampal circuits
- _id: 8d9195e9-16d5-11f0-9cad-d075be887a1e
  grant_number: PAT 4178023
  name: Synaptic networks of human brain
- _id: 26366136-B435-11E9-9278-68D0E5697425
  name: Reglas de Conectividad funcional en el hipocampo
publication: Nature Communications
publication_identifier:
  eissn:
  - 2041-1723
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
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title: Developmental emergence of sparse and structured synaptic connectivity in the
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type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 17
year: '2026'
...
---
_id: '21442'
author:
- first_name: Alois
  full_name: Schlögl, Alois
  id: 45BF87EE-F248-11E8-B48F-1D18A9856A87
  last_name: Schlögl
  orcid: 0000-0002-5621-8100
citation:
  ama: Schlögl A. CA3Simu v1.06 (vargas2026v1). 2026. doi:<a href="https://doi.org/10.15479/AT-ISTA-21442">10.15479/AT-ISTA-21442</a>
  apa: Schlögl, A. (2026). CA3Simu v1.06 (vargas2026v1). Institute of Science and
    Technology Austria. <a href="https://doi.org/10.15479/AT-ISTA-21442">https://doi.org/10.15479/AT-ISTA-21442</a>
  chicago: Schlögl, Alois. “CA3Simu v1.06 (Vargas2026v1).” Institute of Science and
    Technology Austria, 2026. <a href="https://doi.org/10.15479/AT-ISTA-21442">https://doi.org/10.15479/AT-ISTA-21442</a>.
  ieee: A. Schlögl, “CA3Simu v1.06 (vargas2026v1).” Institute of Science and Technology
    Austria, 2026.
  ista: Schlögl A. 2026. CA3Simu v1.06 (vargas2026v1), Institute of Science and Technology
    Austria, <a href="https://doi.org/10.15479/AT-ISTA-21442">10.15479/AT-ISTA-21442</a>.
  mla: Schlögl, Alois. <i>CA3Simu v1.06 (Vargas2026v1)</i>. Institute of Science and
    Technology Austria, 2026, doi:<a href="https://doi.org/10.15479/AT-ISTA-21442">10.15479/AT-ISTA-21442</a>.
  short: A. Schlögl, (2026).
corr_author: '1'
date_created: 2026-03-12T08:20:46Z
date_published: 2026-03-12T00:00:00Z
date_updated: 2026-07-01T06:47:49Z
day: '12'
department:
- _id: ScienComp
- _id: PeJo
doi: 10.15479/AT-ISTA-21442
ec_funded: 1
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fulldoi: https://doi.org/10.15479/AT-ISTA-21442
has_accepted_license: '1'
keyword:
- hypocampus
- ca3 simulations
- modelling
license: https://opensource.org/licenses/GPL-3.0
month: '03'
oa: 1
project:
- _id: e62b56fe-ab3c-11f0-94c7-d181dd352b3b
  grant_number: '101199096'
  name: Synaptic mechanisms of engram storage and retrieval in CA3 hippocampal microcircuits
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  grant_number: P36232
  name: Mechanisms of GABA release in hippocampal circuits
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  grant_number: PAT 4178023
  name: Synaptic networks of human brain
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  call_identifier: H2020
  grant_number: '692692'
  name: Biophysics and circuit function of a giant cortical glutamatergic synapse
publisher: Institute of Science and Technology Austria
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title: CA3Simu v1.06 (vargas2026v1)
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type: software
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year: '2026'
...
---
OA_place: publisher
OA_type: gold
_id: '22119'
article_number: EGU26-19367
article_processing_charge: No
author:
- first_name: José M
  full_name: Muñoz Hermosilla, José M
  id: e1037a6d-646e-11ef-b402-e0ed9ab0901e
  last_name: Muñoz Hermosilla
  orcid: 0000-0002-1990-8508
- first_name: Evan
  full_name: Miles, Evan
  last_name: Miles
- first_name: Michael
  full_name: McCarthy, Michael
  id: 22a2674a-61ce-11ee-94b5-d18813baf16f
  last_name: McCarthy
- first_name: Juan Vicente
  full_name: Melo Velasco, Juan Vicente
  id: 2611dec0-b9c6-11ed-9bea-a81c2b17a549
  last_name: Melo Velasco
- first_name: Florian
  full_name: Hardmeier, Florian
  last_name: Hardmeier
- first_name: PRATEEK
  full_name: GANTAYAT, PRATEEK
  id: 02734268-3e8d-11ef-80a1-cec4a088d004
  last_name: GANTAYAT
- first_name: Adrià
  full_name: Fontrodona-Bach, Adrià
  id: f06891fd-9f42-11ee-8632-a20971c43046
  last_name: Fontrodona-Bach
- first_name: Guillaume
  full_name: Jouvet, Guillaume
  last_name: Jouvet
- first_name: Francesca
  full_name: Pellicciotti, Francesca
  id: b28f055a-81ea-11ed-b70c-a9fe7f7b0e70
  last_name: Pellicciotti
  orcid: 0000-0002-5554-8087
citation:
  ama: 'Muñoz Hermosilla JM, Miles E, McCarthy M, et al. Constraining debris input
    to Oberaletsch Glacier using ensemble-based Lagrangian modelling. In: <i>EGU General
    Assembly 2026</i>. European Geosciences Union; 2026. doi:<a href="https://doi.org/10.5194/egusphere-egu26-19367">10.5194/egusphere-egu26-19367</a>'
  apa: 'Muñoz Hermosilla, J. M., Miles, E., McCarthy, M., Melo Velasco, J. V., Hardmeier,
    F., GANTAYAT, P., … Pellicciotti, F. (2026). Constraining debris input to Oberaletsch
    Glacier using ensemble-based Lagrangian modelling. In <i>EGU General Assembly
    2026</i>. Vienna, Austria &#38; Virtual: European Geosciences Union. <a href="https://doi.org/10.5194/egusphere-egu26-19367">https://doi.org/10.5194/egusphere-egu26-19367</a>'
  chicago: Muñoz Hermosilla, José M, Evan Miles, Michael McCarthy, Juan Vicente Melo
    Velasco, Florian Hardmeier, PRATEEK GANTAYAT, Adrià Fontrodona-Bach, Guillaume
    Jouvet, and Francesca Pellicciotti. “Constraining Debris Input to Oberaletsch
    Glacier Using Ensemble-Based Lagrangian Modelling.” In <i>EGU General Assembly
    2026</i>. European Geosciences Union, 2026. <a href="https://doi.org/10.5194/egusphere-egu26-19367">https://doi.org/10.5194/egusphere-egu26-19367</a>.
  ieee: J. M. Muñoz Hermosilla <i>et al.</i>, “Constraining debris input to Oberaletsch
    Glacier using ensemble-based Lagrangian modelling,” in <i>EGU General Assembly
    2026</i>, Vienna, Austria &#38; Virtual, 2026.
  ista: Muñoz Hermosilla JM, Miles E, McCarthy M, Melo Velasco JV, Hardmeier F, GANTAYAT
    P, Fontrodona-Bach A, Jouvet G, Pellicciotti F. 2026. Constraining debris input
    to Oberaletsch Glacier using ensemble-based Lagrangian modelling. EGU General
    Assembly 2026. EGU General Assembly, EGU26-19367.
  mla: Muñoz Hermosilla, José M., et al. “Constraining Debris Input to Oberaletsch
    Glacier Using Ensemble-Based Lagrangian Modelling.” <i>EGU General Assembly 2026</i>,
    EGU26-19367, European Geosciences Union, 2026, doi:<a href="https://doi.org/10.5194/egusphere-egu26-19367">10.5194/egusphere-egu26-19367</a>.
  short: J.M. Muñoz Hermosilla, E. Miles, M. McCarthy, J.V. Melo Velasco, F. Hardmeier,
    P. GANTAYAT, A. Fontrodona-Bach, G. Jouvet, F. Pellicciotti, in:, EGU General
    Assembly 2026, European Geosciences Union, 2026.
conference:
  end_date: 2026-05-08
  location: Vienna, Austria & Virtual
  name: EGU General Assembly
  start_date: 2026-05-03
corr_author: '1'
date_created: 2026-06-22T12:16:50Z
date_published: 2026-07-02T00:00:00Z
date_updated: 2026-07-02T06:42:37Z
day: '02'
ddc:
- '550'
department:
- _id: FrPe
- _id: GradSch
doi: 10.5194/egusphere-egu26-19367
file:
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language:
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month: '07'
oa: 1
oa_version: Published Version
publication: EGU General Assembly 2026
publication_status: published
publisher: European Geosciences Union
status: public
title: Constraining debris input to Oberaletsch Glacier using ensemble-based Lagrangian
  modelling
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
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  short: CC BY (4.0)
type: conference_abstract
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2026'
...
---
OA_place: publisher
OA_type: hybrid
PlanS_conform: '1'
_id: '22241'
abstract:
- lang: eng
  text: We revisit the computation of 3D generalized winding numbers, a useful measure
    for inside-outside classification on triangle meshes with gaps, self-intersections,
    and open boundaries. At the core of our new method is an analytical reduction
    of the surface integral that defines the winding number, resulting in a single
    ray-mesh intersection test and an elementary sum over boundary edges per evaluation.
    This construction is orders of magnitude more efficient than the state of the
    art in practice, which we show in an extensive performance benchmark. Conveniently,
    the method also reduces to the best-available asymptotic complexity in the worst
    case, and it introduces no approximations apart from floating-point errors. Our
    algorithm is conceptually simple to understand, straightforward to implement and
    debug, and it works reliably even on extremely noisy and corrupt input geometry.
acknowledgement: "We thank Sadashige Ishida and Ryusuke Sugimoto for their insightful
  discussions and proofreading and other members of the ISTA\r\nVisual Computing Group
  for their general feedback. This project was\r\nfunded in part by the European Research
  Council (ERC Consolidator\r\nGrant 101045083 CoDiNA)."
article_number: '41'
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Peiyuan
  full_name: Xie, Peiyuan
  id: 488e236c-6bad-11f0-9831-859175c78e8a
  last_name: Xie
- first_name: Christian
  full_name: Hafner, Christian
  id: 400429CC-F248-11E8-B48F-1D18A9856A87
  last_name: Hafner
- first_name: Christopher J
  full_name: Wojtan, Christopher J
  id: 3C61F1D2-F248-11E8-B48F-1D18A9856A87
  last_name: Wojtan
  orcid: 0000-0001-6646-5546
citation:
  ama: Xie P, Hafner C, Wojtan C. Fast and exact winding numbers for triangle meshes.
    <i>ACM Transactions on Graphics</i>. 2026;45(4). doi:<a href="https://doi.org/10.1145/3811339">10.1145/3811339</a>
  apa: Xie, P., Hafner, C., &#38; Wojtan, C. (2026). Fast and exact winding numbers
    for triangle meshes. <i>ACM Transactions on Graphics</i>. Association for Computing
    Machinery. <a href="https://doi.org/10.1145/3811339">https://doi.org/10.1145/3811339</a>
  chicago: Xie, Peiyuan, Christian Hafner, and Chris Wojtan. “Fast and Exact Winding
    Numbers for Triangle Meshes.” <i>ACM Transactions on Graphics</i>. Association
    for Computing Machinery, 2026. <a href="https://doi.org/10.1145/3811339">https://doi.org/10.1145/3811339</a>.
  ieee: P. Xie, C. Hafner, and C. Wojtan, “Fast and exact winding numbers for triangle
    meshes,” <i>ACM Transactions on Graphics</i>, vol. 45, no. 4. Association for
    Computing Machinery, 2026.
  ista: Xie P, Hafner C, Wojtan C. 2026. Fast and exact winding numbers for triangle
    meshes. ACM Transactions on Graphics. 45(4), 41.
  mla: Xie, Peiyuan, et al. “Fast and Exact Winding Numbers for Triangle Meshes.”
    <i>ACM Transactions on Graphics</i>, vol. 45, no. 4, 41, Association for Computing
    Machinery, 2026, doi:<a href="https://doi.org/10.1145/3811339">10.1145/3811339</a>.
  short: P. Xie, C. Hafner, C. Wojtan, ACM Transactions on Graphics 45 (2026).
corr_author: '1'
das_tickbox: '0'
date_created: 2026-07-03T21:03:48Z
date_published: 2026-07-03T00:00:00Z
date_updated: 2026-07-06T06:14:18Z
day: '03'
ddc:
- '000'
department:
- _id: GradSch
- _id: ChWo
doi: 10.1145/3811339
file:
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  creator: dernst
  date_created: 2026-07-06T06:13:12Z
  date_updated: 2026-07-06T06:13:12Z
  file_id: '22249'
  file_name: 2026_TransactionsGraphics_Xie.pdf
  file_size: 5212838
  relation: main_file
  success: 1
file_date_updated: 2026-07-06T06:13:12Z
fulldoi: https://doi.org/10.1145/3811339
has_accepted_license: '1'
intvolume: '        45'
issue: '4'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
project:
- _id: 34bc2376-11ca-11ed-8bc3-9a3b3961a088
  grant_number: '101045083'
  name: Computational Discovery of Numerical Algorithms for Animation and Simulation
    of Natural Phenomena
publication: ACM Transactions on Graphics
publication_identifier:
  eissn:
  - 1557-7368
  issn:
  - 0730-0301
publication_status: published
publisher: Association for Computing Machinery
quality_controlled: '1'
researchdata_availability: no
scopus_import: '1'
status: public
supplementarymaterial: no
title: Fast and exact winding numbers for triangle meshes
tmp:
  image: /images/cc_by.png
  legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
  name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
  short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 45
year: '2026'
...
