---
_id: '17072'
abstract:
- lang: eng
text: The collapse of polypeptides is thought important to protein folding, aggregation,
intrinsic disorder, and phase separation. However, whether polypeptide collapse
is modulated in cells to control protein states is unclear. Here, using integrated
protein manipulation and imaging, we show that the chaperonin GroEL-ES can accelerate
the folding of proteins by strengthening their collapse. GroEL induces contractile
forces in substrate chains, which draws them into the cavity and triggers a general
compaction and discrete folding transitions, even for slow-folding proteins. This
collapse enhancement is strongest in the nucleotide-bound states of GroEL and
is aided by GroES binding to the cavity rim and by the amphiphilic C-terminal
tails at the cavity bottom. Collapse modulation is distinct from other proposed
GroEL-ES folding acceleration mechanisms, including steric confinement and misfold
unfolding. Given the prevalence of collapse throughout the proteome, we conjecture
that collapse modulation is more generally relevant within the protein quality
control machinery.
acknowledgement: We thank A. L. Horwich, K. Chakraborty, and B. Schuler for providing
plasmids, and R. van Leeuwen, M. Mayer, J. van Zon, W. Noorduin, and P. R. ten Wolde
for comments and critical reading of the manuscript. Work in the group of S.J.T.
was supported by the Netherlands Organization for Scientific Research (NWO). Work
in the group of H.S.R. was supported by a grant from the NIH (R01GM114405).
article_number: eabl6293
article_processing_charge: Yes
article_type: original
author:
- first_name: Mohsin M.
full_name: Naqvi, Mohsin M.
last_name: Naqvi
- first_name: Mario
full_name: Avellaneda Sarrió, Mario
id: DC4BA84C-56E6-11EA-AD5D-348C3DDC885E
last_name: Avellaneda Sarrió
orcid: 0000-0001-6406-524X
- first_name: Andrew
full_name: Roth, Andrew
last_name: Roth
- first_name: Eline J.
full_name: Koers, Eline J.
last_name: Koers
- first_name: Antoine
full_name: Roland, Antoine
last_name: Roland
- first_name: Vanda
full_name: Sunderlikova, Vanda
last_name: Sunderlikova
- first_name: Günter
full_name: Kramer, Günter
last_name: Kramer
- first_name: Hays S.
full_name: Rye, Hays S.
last_name: Rye
- first_name: Sander J.
full_name: Tans, Sander J.
last_name: Tans
citation:
ama: Naqvi MM, Avellaneda Sarrió M, Roth A, et al. Protein chain collapse modulation
and folding stimulation by GroEL-ES. Science Advances. 2022;8(9). doi:10.1126/sciadv.abl6293
apa: Naqvi, M. M., Avellaneda Sarrió, M., Roth, A., Koers, E. J., Roland, A., Sunderlikova,
V., … Tans, S. J. (2022). Protein chain collapse modulation and folding stimulation
by GroEL-ES. Science Advances. American Association for the Advancement
of Science. https://doi.org/10.1126/sciadv.abl6293
chicago: Naqvi, Mohsin M., Mario Avellaneda Sarrió, Andrew Roth, Eline J. Koers,
Antoine Roland, Vanda Sunderlikova, Günter Kramer, Hays S. Rye, and Sander J.
Tans. “Protein Chain Collapse Modulation and Folding Stimulation by GroEL-ES.”
Science Advances. American Association for the Advancement of Science,
2022. https://doi.org/10.1126/sciadv.abl6293.
ieee: M. M. Naqvi et al., “Protein chain collapse modulation and folding
stimulation by GroEL-ES,” Science Advances, vol. 8, no. 9. American Association
for the Advancement of Science, 2022.
ista: Naqvi MM, Avellaneda Sarrió M, Roth A, Koers EJ, Roland A, Sunderlikova V,
Kramer G, Rye HS, Tans SJ. 2022. Protein chain collapse modulation and folding
stimulation by GroEL-ES. Science Advances. 8(9), eabl6293.
mla: Naqvi, Mohsin M., et al. “Protein Chain Collapse Modulation and Folding Stimulation
by GroEL-ES.” Science Advances, vol. 8, no. 9, eabl6293, American Association
for the Advancement of Science, 2022, doi:10.1126/sciadv.abl6293.
short: M.M. Naqvi, M. Avellaneda Sarrió, A. Roth, E.J. Koers, A. Roland, V. Sunderlikova,
G. Kramer, H.S. Rye, S.J. Tans, Science Advances 8 (2022).
date_created: 2024-05-29T06:12:19Z
date_published: 2022-03-01T00:00:00Z
date_updated: 2024-08-05T08:30:29Z
day: '01'
ddc:
- '570'
department:
- _id: MiSi
doi: 10.1126/sciadv.abl6293
external_id:
pmid:
- '35245117'
file:
- access_level: open_access
checksum: 9511579306cce7e04107d3d6389ed614
content_type: application/pdf
creator: dernst
date_created: 2024-07-31T12:01:51Z
date_updated: 2024-07-31T12:01:51Z
file_id: '17357'
file_name: 2022_ScienceAdv_Naqvi.pdf
file_size: 2404150
relation: main_file
success: 1
file_date_updated: 2024-07-31T12:01:51Z
fulldoi: https://doi.org/10.1126/sciadv.abl6293
has_accepted_license: '1'
intvolume: ' 8'
issue: '9'
language:
- iso: eng
month: '03'
oa: 1
oa_version: Published Version
pmid: 1
publication: Science Advances
publication_identifier:
issn:
- 2375-2548
publication_status: published
publisher: American Association for the Advancement of Science
quality_controlled: '1'
scopus_import: '1'
status: public
title: Protein chain collapse modulation and folding stimulation by GroEL-ES
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 8
year: '2022'
...
---
_id: '17075'
abstract:
- lang: eng
text: Disorders associated with the malfunction of amino acid transporters mainly
affect the function of the intestine, kidney, brain, and liver. Mutations of brain
amino acid transporters, for example, alter neuronal excitability (e.g., episodic
ataxia due to SLC1A3 (EAAT1) defect and hyperekplexia due to SLC6A5 (GLYT2) deficiency)
or brain development (SLC1A1 (EAAT3), SLC3A2/SLC7A5 (CD98hc/LAT1), and SLC1A4
(ASCT1) deficiencies). Mutations of renal and intestinal amino acid transporters
SLC3A1/SLC7A9 (rBAT/b0,+AT) and SLC1A1 (EAAT3) cause renal problems (cystinuria
and dicarboxylic aminoaciduria, respectively) and malabsorption that can affect
whole-body homoeostasis (Hartnup disorder SLC6A19 (B0AT1), lysinuric protein intolerance
SLC3A2/SLC7A7 (CD98hc/y+LAT1), and hyperdibasic aminoaciduria type 1). Mutations
in the neuronal system A amino acid transporter SLC38A8 (SNAT8) cause eye developmental
and visual defects. Inborn errors associated with mitochondrial SLC25 family members
such as SLC25A12 (neuronal- and muscle-specific mitochondrial aspartate/glutamate
transporter 1; AGC1) (global cerebral hypomyelination), SLC25A13 (aspartate/glutamate
transporter 2) (citrin deficiency), SLC25A15 (ornithine-citrulline carrier 2)
(homocitrullinuria, hyperornithinemia, and hyperammonemia syndrome), and SLC25A22
(mitochondrial glutamate/H+ symporter 1, GC1) (neonatal myoclonic epilepsy) will
be dealt within Chap. 43 (defects of mitochondrial carriers).
acknowledgement: The authors thank Dr. Christian Lueck (Canberra Hospital) for clarification
of differential diagnosis in cases of episodic ataxia. The authors thank Dr. Rafael
Artuch (Hospital San Joan de Deu, Barcelona) for reference values of plasma amino
acid concentration. The authors also thank Lisa Kraus (Institute of Science and
Technology-Austria) and Dr. Susanna Bodoy (IRB-Barcelona) that helped in preparing
tables and bibliography.
article_processing_charge: No
author:
- first_name: Manuel
full_name: Palacín, Manuel
last_name: Palacín
- first_name: Stefan
full_name: Bröer, Stefan
last_name: Bröer
- first_name: Gaia
full_name: Novarino, Gaia
id: 3E57A680-F248-11E8-B48F-1D18A9856A87
last_name: Novarino
orcid: 0000-0002-7673-7178
citation:
ama: 'Palacín M, Bröer S, Novarino G. Amino Acid Transport Defects. In: Blau N,
Vici CD, Ferreira CR, Vianey-Saban C, van Karnebeek CDM, eds. Physician’s Guide
to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic Diseases.
2nd ed. Cham: Springer Nature; 2022:291-312. doi:10.1007/978-3-030-67727-5_18'
apa: 'Palacín, M., Bröer, S., & Novarino, G. (2022). Amino Acid Transport Defects.
In N. Blau, C. D. Vici, C. R. Ferreira, C. Vianey-Saban, & C. D. M. van Karnebeek
(Eds.), Physician’s Guide to the Diagnosis, Treatment, and Follow-Up of Inherited
Metabolic Diseases (2nd ed., pp. 291–312). Cham: Springer Nature. https://doi.org/10.1007/978-3-030-67727-5_18'
chicago: 'Palacín, Manuel, Stefan Bröer, and Gaia Novarino. “Amino Acid Transport
Defects.” In Physician’s Guide to the Diagnosis, Treatment, and Follow-Up of
Inherited Metabolic Diseases, edited by Nenad Blau, Carlo Dionisi Vici, Carlos
R. Ferreira, Christine Vianey-Saban, and Clara D.M. van Karnebeek, 2nd ed., 291–312.
Cham: Springer Nature, 2022. https://doi.org/10.1007/978-3-030-67727-5_18.'
ieee: 'M. Palacín, S. Bröer, and G. Novarino, “Amino Acid Transport Defects,” in
Physician’s Guide to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic
Diseases, 2nd ed., N. Blau, C. D. Vici, C. R. Ferreira, C. Vianey-Saban, and
C. D. M. van Karnebeek, Eds. Cham: Springer Nature, 2022, pp. 291–312.'
ista: 'Palacín M, Bröer S, Novarino G. 2022.Amino Acid Transport Defects. In: Physician’s
Guide to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic Diseases.
, 291–312.'
mla: Palacín, Manuel, et al. “Amino Acid Transport Defects.” Physician’s Guide
to the Diagnosis, Treatment, and Follow-Up of Inherited Metabolic Diseases,
edited by Nenad Blau et al., 2nd ed., Springer Nature, 2022, pp. 291–312, doi:10.1007/978-3-030-67727-5_18.
short: M. Palacín, S. Bröer, G. Novarino, in:, N. Blau, C.D. Vici, C.R. Ferreira,
C. Vianey-Saban, C.D.M. van Karnebeek (Eds.), Physician’s Guide to the Diagnosis,
Treatment, and Follow-Up of Inherited Metabolic Diseases, 2nd ed., Springer Nature,
Cham, 2022, pp. 291–312.
date_created: 2024-05-29T06:13:04Z
date_published: 2022-02-22T00:00:00Z
date_updated: 2024-07-31T11:45:50Z
day: '22'
department:
- _id: GaNo
doi: 10.1007/978-3-030-67727-5_18
edition: '2'
editor:
- first_name: Nenad
full_name: Blau, Nenad
last_name: Blau
- first_name: Carlo Dionisi
full_name: Vici, Carlo Dionisi
last_name: Vici
- first_name: 'Carlos R. '
full_name: 'Ferreira, Carlos R. '
last_name: Ferreira
- first_name: Christine
full_name: Vianey-Saban, Christine
last_name: Vianey-Saban
- first_name: Clara D.M.
full_name: van Karnebeek, Clara D.M.
last_name: van Karnebeek
fulldoi: https://doi.org/10.1007/978-3-030-67727-5_18
language:
- iso: eng
month: '02'
oa_version: None
page: 291-312
place: Cham
publication: Physician's Guide to the Diagnosis, Treatment, and Follow-Up of Inherited
Metabolic Diseases
publication_identifier:
eisbn:
- '9783030677275'
isbn:
- '9783030677268'
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Amino Acid Transport Defects
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '17077'
abstract:
- lang: eng
text: "Resolving a conjecture of Füredi from 1988, we prove that with high probability,
the random graph \U0001D53E(\U0001D45B, 1/2) admits a friendly bisection of its
vertex set, i.e., a\r\npartition of its vertex set into two parts whose sizes
differ by at most one in which\r\n\U0001D45B − \U0001D45C(\U0001D45B) vertices
have more neighbours in their own part as across. Our proof is constructive, and
in the process, we develop a new method to study stochastic processes\r\ndriven
by degree information in random graphs; this involves combining enumeration\r\ntechniques
with an abstract second moment argument."
acknowledgement: "We thank the referees for extensive comments which helped improve
the paper substantially.\r\nThe first author was supported in part by NSF grants
DMS-1954395 and DMS-1953799. The second author was supported by NSF grant DMS-1953990.
The third author was supported by NSF grant DMS180052. The fourth and fifth authors
were both supported by NSF Graduate Research Fellowship Program DGE-1745302."
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Asaf
full_name: Ferber, Asaf
last_name: Ferber
- first_name: Matthew Alan
full_name: Kwan, Matthew Alan
id: 5fca0887-a1db-11eb-95d1-ca9d5e0453b3
last_name: Kwan
orcid: 0000-0002-4003-7567
- first_name: Bhargav
full_name: Narayanan, Bhargav
last_name: Narayanan
- first_name: Ashwin
full_name: Sah, Ashwin
last_name: Sah
- first_name: Mehtaab
full_name: Sawhney, Mehtaab
last_name: Sawhney
citation:
ama: Ferber A, Kwan MA, Narayanan B, Sah A, Sawhney M. Friendly bisections of random
graphs. Communications of the American Mathematical Society. 2022;2(10):380-416.
doi:10.1090/cams/13
apa: Ferber, A., Kwan, M. A., Narayanan, B., Sah, A., & Sawhney, M. (2022).
Friendly bisections of random graphs. Communications of the American Mathematical
Society. American Mathematical Society. https://doi.org/10.1090/cams/13
chicago: Ferber, Asaf, Matthew Alan Kwan, Bhargav Narayanan, Ashwin Sah, and Mehtaab
Sawhney. “Friendly Bisections of Random Graphs.” Communications of the American
Mathematical Society. American Mathematical Society, 2022. https://doi.org/10.1090/cams/13.
ieee: A. Ferber, M. A. Kwan, B. Narayanan, A. Sah, and M. Sawhney, “Friendly bisections
of random graphs,” Communications of the American Mathematical Society,
vol. 2, no. 10. American Mathematical Society, pp. 380–416, 2022.
ista: Ferber A, Kwan MA, Narayanan B, Sah A, Sawhney M. 2022. Friendly bisections
of random graphs. Communications of the American Mathematical Society. 2(10),
380–416.
mla: Ferber, Asaf, et al. “Friendly Bisections of Random Graphs.” Communications
of the American Mathematical Society, vol. 2, no. 10, American Mathematical
Society, 2022, pp. 380–416, doi:10.1090/cams/13.
short: A. Ferber, M.A. Kwan, B. Narayanan, A. Sah, M. Sawhney, Communications of
the American Mathematical Society 2 (2022) 380–416.
corr_author: '1'
date_created: 2024-05-29T06:13:37Z
date_published: 2022-12-20T00:00:00Z
date_updated: 2024-07-15T08:06:05Z
day: '20'
ddc:
- '500'
department:
- _id: MaKw
doi: 10.1090/cams/13
external_id:
arxiv:
- '2105.13337'
file:
- access_level: open_access
checksum: 719861e76f5bce3d0362d8171daa26fc
content_type: application/pdf
creator: cchlebak
date_created: 2024-07-12T12:55:02Z
date_updated: 2024-07-12T12:55:02Z
file_id: '17230'
file_name: 2022_CommAMS_Ferber.pdf
file_size: 335965
relation: main_file
success: 1
file_date_updated: 2024-07-12T12:55:02Z
fulldoi: https://doi.org/10.1090/cams/13
has_accepted_license: '1'
intvolume: ' 2'
issue: '10'
language:
- iso: eng
license: https://creativecommons.org/licenses/by/3.0/
month: '12'
oa: 1
oa_version: Published Version
page: 380-416
publication: Communications of the American Mathematical Society
publication_identifier:
issn:
- 2692-3688
publication_status: published
publisher: American Mathematical Society
quality_controlled: '1'
status: public
title: Friendly bisections of random graphs
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/3.0/legalcode
name: Creative Commons Attribution 3.0 Unported (CC BY 3.0)
short: CC BY (3.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 2
year: '2022'
...
---
_id: '17084'
abstract:
- lang: eng
text: 'Given a graph where every vertex has exactly one labeled token, how can we
most quickly execute a given permutation on the tokens? In (sequential) token
swapping, the goal is to use the shortest possible sequence of swaps, each of
which exchanges the tokens at the two endpoints of an edge of the graph. In parallel
token swapping, the goal is to use the fewest rounds, each of which consists of
one or more swaps on the edges of a matching. We prove that both of these problems
remain NP-hard when the graph is restricted to be a tree. These token swapping
problems have been studied by disparate groups of researchers in discrete mathematics,
theoretical computer science, robot motion planning, game theory, and engineering.
Previous work establishes NP-completeness on general graphs (for both problems),
constant-factor approximation algorithms, and some poly-time exact algorithms
for simple graph classes such as cliques, stars, paths, and cycles. Sequential
and parallel token swapping on trees were first studied over thirty years ago
(as "sorting with a transposition tree") and over twenty-five years ago (as "routing
permutations via matchings"), yet their complexities were previously unknown.
We also show limitations on approximation of sequential token swapping on trees:
we identify a broad class of algorithms that encompass all three known polynomial-time
algorithms that achieve the best known approximation factor (which is 2) and show
that no such algorithm can achieve an approximation factor less than 2.'
acknowledgement: "g Anna Lubiw: Supported by the Natural Sciences and Engineering
Research Council of\r\nCanada (NSERC). Jayson Lynch: Supported by the Natural Sciences
and Engineering Research Council of Canada (NSERC). Zuzana Masárová: Supported by
Wittgenstein Prize, Austrian Science Fund (FWF), grant no. Z 342-N31. Virginia Vassilevska
Williams: Supported by an NSF CAREER Award, NSF Grants CCF-1528078, CCF-1514339
and CCF-1909429, a BSF Grant BSF:2012338, a Google Research Fellowship and a Sloan
Research Fellowship.\r\nNicole Wein: Supported by a grant to DIMACS from the Simons
Foundation (820931). This work was done while the author was at MIT.\r\nThis research
was initiated at the 34th Bellairs Winter Workshop on Computational Geometry, co-organized
by Erik Demaine and Godfried Toussaint, held on March 22–29,\r\n2019 in Holetown,
Barbados. We thank the other participants of that workshop for providing a\r\nstimulating
research environment."
alternative_title:
- LIPIcs
article_number: '3'
article_processing_charge: Yes
arxiv: 1
author:
- first_name: Oswin
full_name: Aichholzer, Oswin
last_name: Aichholzer
- first_name: Erik D.
full_name: Demaine, Erik D.
last_name: Demaine
- first_name: Matias
full_name: Korman, Matias
last_name: Korman
- first_name: Anna
full_name: Lubiw, Anna
last_name: Lubiw
- first_name: Jayson
full_name: Lynch, Jayson
last_name: Lynch
- first_name: Zuzana
full_name: Masárová, Zuzana
id: 45CFE238-F248-11E8-B48F-1D18A9856A87
last_name: Masárová
orcid: 0000-0002-6660-1322
- first_name: Mikhail
full_name: Rudoy, Mikhail
last_name: Rudoy
- first_name: Virginia
full_name: Vassilevska Williams, Virginia
last_name: Vassilevska Williams
- first_name: Nicole
full_name: Wein, Nicole
last_name: Wein
citation:
ama: 'Aichholzer O, Demaine ED, Korman M, et al. Hardness of token swapping on trees.
In: 30th Annual European Symposium on Algorithms. Vol 244. Schloss Dagstuhl
- Leibniz-Zentrum für Informatik; 2022. doi:10.4230/LIPIcs.ESA.2022.3'
apa: 'Aichholzer, O., Demaine, E. D., Korman, M., Lubiw, A., Lynch, J., Masárová,
Z., … Wein, N. (2022). Hardness of token swapping on trees. In 30th Annual
European Symposium on Algorithms (Vol. 244). Berlin/Potsdam, Germany: Schloss
Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.4230/LIPIcs.ESA.2022.3'
chicago: Aichholzer, Oswin, Erik D. Demaine, Matias Korman, Anna Lubiw, Jayson Lynch,
Zuzana Masárová, Mikhail Rudoy, Virginia Vassilevska Williams, and Nicole Wein.
“Hardness of Token Swapping on Trees.” In 30th Annual European Symposium on
Algorithms, Vol. 244. Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
https://doi.org/10.4230/LIPIcs.ESA.2022.3.
ieee: O. Aichholzer et al., “Hardness of token swapping on trees,” in 30th
Annual European Symposium on Algorithms, Berlin/Potsdam, Germany, 2022, vol.
244.
ista: 'Aichholzer O, Demaine ED, Korman M, Lubiw A, Lynch J, Masárová Z, Rudoy M,
Vassilevska Williams V, Wein N. 2022. Hardness of token swapping on trees. 30th
Annual European Symposium on Algorithms. ESA: European Symposium on Algorithms,
LIPIcs, vol. 244, 3.'
mla: Aichholzer, Oswin, et al. “Hardness of Token Swapping on Trees.” 30th Annual
European Symposium on Algorithms, vol. 244, 3, Schloss Dagstuhl - Leibniz-Zentrum
für Informatik, 2022, doi:10.4230/LIPIcs.ESA.2022.3.
short: O. Aichholzer, E.D. Demaine, M. Korman, A. Lubiw, J. Lynch, Z. Masárová,
M. Rudoy, V. Vassilevska Williams, N. Wein, in:, 30th Annual European Symposium
on Algorithms, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2022.
conference:
end_date: 2022-09-09
location: Berlin/Potsdam, Germany
name: 'ESA: European Symposium on Algorithms'
start_date: 2022-09-05
corr_author: '1'
date_created: 2024-05-29T06:27:16Z
date_published: 2022-09-01T00:00:00Z
date_updated: 2025-04-15T07:16:56Z
day: '01'
ddc:
- '510'
department:
- _id: HeEd
- _id: UlWa
doi: 10.4230/LIPIcs.ESA.2022.3
external_id:
arxiv:
- '2103.06707'
file:
- access_level: open_access
checksum: a1fbd3e7baad510fbcb998cf4a7d9f7f
content_type: application/pdf
creator: dernst
date_created: 2024-08-12T08:51:44Z
date_updated: 2024-08-12T08:51:44Z
file_id: '17420'
file_name: 2022_LIPIcS_Aichholzer.pdf
file_size: 1406071
relation: main_file
success: 1
file_date_updated: 2024-08-12T08:51:44Z
fulldoi: https://doi.org/10.4230/LIPIcs.ESA.2022.3
has_accepted_license: '1'
intvolume: ' 244'
language:
- iso: eng
month: '09'
oa: 1
oa_version: Published Version
project:
- _id: 268116B8-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: Z00342
name: Mathematics, Computer Science
publication: 30th Annual European Symposium on Algorithms
publication_status: published
publisher: Schloss Dagstuhl - Leibniz-Zentrum für Informatik
quality_controlled: '1'
scopus_import: '1'
status: public
title: Hardness of token swapping on trees
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 244
year: '2022'
...
---
_id: '17085'
abstract:
- lang: eng
text: Mosses are a cosmopolitan group of land plants, sister to vascular plants,
with a high potential for molecular and cell biological research. The species
Physcomitrium patens has helped gaining better understanding of the biological
processes of the plant cell, and it has become a central system to understand
water-to-land plant transition through 2D-to-3D growth transition, regulation
of asymmetric cell division, shoot apical cell establishment and maintenance,
phyllotaxis and regeneration. P. patens was the first fully sequenced moss in
2008, with the latest annotated release in 2018. It has been shown that many gene
functions and networks are conserved in mosses when compared to angiosperms. Importantly,
this model organism has a simplified and accessible body structure that facilitates
close tracking in time and space with the support of live cell imaging set-ups
and multiple reporter lines. This has become possible thanks to its fully established
molecular toolkit, with highly efficient PEG-assisted, CRISPR/Cas9 and RNAi transformation
and silencing protocols, among others. Here we provide examples on how mosses
exhibit advantages over vascular plants to study several processes and their future
potential to answer some other outstanding questions in plant cell biology.
acknowledgement: 'The authors would like to thank Dr. Jeroen de Keijzer and Dr. Tijs
Ketelaar for their thoughtful and detailed review of the manuscript. Also, the funding
agencies Technology, Knowledge and Innovation, division Horticulture and Propagating
Material (TKI T&U) and the Dutch Research Council (NWO) (reference number: TKILWV20.390)
for funding JFC and the ERC grant to Prof. J. Friml (reference number: PR1023ERC02)
for funding HT. The authors would like to sincerely apologise for the literature
not cited that may be relevant for this chapter and is not present due to space
constraints.'
article_processing_charge: No
author:
- first_name: Jordi
full_name: Floriach-Clark, Jordi
last_name: Floriach-Clark
- first_name: Han
full_name: Tang, Han
id: 19BDF720-25A0-11EA-AC6E-928F3DDC885E
last_name: Tang
orcid: 0000-0001-6152-6637
- first_name: Viola
full_name: Willemsen, Viola
last_name: Willemsen
citation:
ama: 'Floriach-Clark J, Tang H, Willemsen V. Mosses: Accessible Systems for Plant
Development Studies. In: Abdurakhmonov IY, ed. Model Organisms in Plant Genetics.
IntechOpen; 2022. doi:10.5772/intechopen.100535'
apa: 'Floriach-Clark, J., Tang, H., & Willemsen, V. (2022). Mosses: Accessible
Systems for Plant Development Studies. In I. Y. Abdurakhmonov (Ed.), Model
Organisms in Plant Genetics. IntechOpen. https://doi.org/10.5772/intechopen.100535'
chicago: 'Floriach-Clark, Jordi, Han Tang, and Viola Willemsen. “Mosses: Accessible
Systems for Plant Development Studies.” In Model Organisms in Plant Genetics,
edited by Ibrokhim Y. Abdurakhmonov. IntechOpen, 2022. https://doi.org/10.5772/intechopen.100535.'
ieee: 'J. Floriach-Clark, H. Tang, and V. Willemsen, “Mosses: Accessible Systems
for Plant Development Studies,” in Model Organisms in Plant Genetics, I.
Y. Abdurakhmonov, Ed. IntechOpen, 2022.'
ista: 'Floriach-Clark J, Tang H, Willemsen V. 2022.Mosses: Accessible Systems for
Plant Development Studies. In: Model Organisms in Plant Genetics. .'
mla: 'Floriach-Clark, Jordi, et al. “Mosses: Accessible Systems for Plant Development
Studies.” Model Organisms in Plant Genetics, edited by Ibrokhim Y. Abdurakhmonov,
IntechOpen, 2022, doi:10.5772/intechopen.100535.'
short: J. Floriach-Clark, H. Tang, V. Willemsen, in:, I.Y. Abdurakhmonov (Ed.),
Model Organisms in Plant Genetics, IntechOpen, 2022.
date_created: 2024-05-29T06:35:13Z
date_published: 2022-06-23T00:00:00Z
date_updated: 2026-06-18T17:52:59Z
day: '23'
ddc:
- '580'
department:
- _id: JiFr
doi: 10.5772/intechopen.100535
ec_funded: 1
editor:
- first_name: Ibrokhim Y.
full_name: Abdurakhmonov, Ibrokhim Y.
last_name: Abdurakhmonov
fulldoi: https://doi.org/10.5772/intechopen.100535
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://doi.org/10.5772/intechopen.100535
month: '06'
oa: 1
oa_version: Published Version
project:
- _id: 261099A6-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '742985'
name: Tracing Evolution of Auxin Transport and Polarity in Plants
publication: Model Organisms in Plant Genetics
publication_identifier:
isbn:
- '9781839697500'
publication_status: published
publisher: IntechOpen
quality_controlled: '1'
status: public
title: 'Mosses: Accessible Systems for Plant Development Studies'
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '17086'
abstract:
- lang: eng
text: 'We consider a high-dimensional mean estimation problem over a binary hidden
Markov model, which illuminates the interplay between memory in data, sample size,
dimension, and signal strength in statistical inference. In this model, an estimator
observes n samples of a d-dimensional parameter vector θ∗∈Rd, multiplied by a
random sign Si (1≤i≤n), and corrupted by isotropic standard Gaussian noise. The
sequence of signs {Si}i∈[n]∈{−1,1}n is drawn from a stationary homogeneous Markov
chain with flip probability δ∈[0,1/2]. As δ varies, this model smoothly interpolates
two well-studied models: the Gaussian Location Model for which δ=0 and the Gaussian
Mixture Model for which δ=1/2. Assuming that the estimator knows δ, we establish
a nearly minimax optimal (up to logarithmic factors) estimation error rate, as
a function of ∥θ∗∥,δ,d,n. We then provide an upper bound to the case of estimating
δ, assuming a (possibly inaccurate) knowledge of θ∗. The bound is proved to be
tight when θ∗ is an accurately known constant. These results are then combined
to an algorithm which estimates θ∗ with δ unknown a priori, and theoretical guarantees
on its error are stated.'
acknowledgement: "Part of this work was done when YZ was a postdoc at Technion where
he received funding from\r\nthe European Union’s Horizon 2020 research and innovation
programme under grant agreement No 682203-ERC-[Inf-Speed-Tradeoff]. The work of
of NW was supported in part by the Israel Science Foundation (ISF) under Grant 1782/22.
NW is grateful to Guy Bresler for introducing him to this problem, for the initial
ideas that led to this research, and for many helpful discussions on the topic."
alternative_title:
- NeurIPS
article_processing_charge: No
arxiv: 1
author:
- first_name: Yihan
full_name: Zhang, Yihan
id: 2ce5da42-b2ea-11eb-bba5-9f264e9d002c
last_name: Zhang
orcid: 0000-0002-6465-6258
- first_name: Nir
full_name: Weinberger, Nir
last_name: Weinberger
citation:
ama: 'Zhang Y, Weinberger N. Mean estimation in high-dimensional binary Markov Gaussian
mixture models. In: 36th Conference on Neural Information Processing Systems.
Vol 35. ML Research Press; 2022.'
apa: 'Zhang, Y., & Weinberger, N. (2022). Mean estimation in high-dimensional
binary Markov Gaussian mixture models. In 36th Conference on Neural Information
Processing Systems (Vol. 35). New Orleans, LA, United States: ML Research
Press.'
chicago: Zhang, Yihan, and Nir Weinberger. “Mean Estimation in High-Dimensional
Binary Markov Gaussian Mixture Models.” In 36th Conference on Neural Information
Processing Systems, Vol. 35. ML Research Press, 2022.
ieee: Y. Zhang and N. Weinberger, “Mean estimation in high-dimensional binary Markov
Gaussian mixture models,” in 36th Conference on Neural Information Processing
Systems, New Orleans, LA, United States, 2022, vol. 35.
ista: 'Zhang Y, Weinberger N. 2022. Mean estimation in high-dimensional binary Markov
Gaussian mixture models. 36th Conference on Neural Information Processing Systems.
NeurIPS: Neural Information Processing Systems, NeurIPS, vol. 35.'
mla: Zhang, Yihan, and Nir Weinberger. “Mean Estimation in High-Dimensional Binary
Markov Gaussian Mixture Models.” 36th Conference on Neural Information Processing
Systems, vol. 35, ML Research Press, 2022.
short: Y. Zhang, N. Weinberger, in:, 36th Conference on Neural Information Processing
Systems, ML Research Press, 2022.
conference:
end_date: 2022-12-09
location: New Orleans, LA, United States
name: 'NeurIPS: Neural Information Processing Systems'
start_date: 2022-11-28
corr_author: '1'
date_created: 2024-05-29T06:37:16Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2024-08-05T09:48:58Z
day: '01'
ddc:
- '000'
department:
- _id: MaMo
external_id:
arxiv:
- '2206.02455'
file:
- access_level: open_access
checksum: 05f6f9f8fc34e224e0cad045b9489030
content_type: application/pdf
creator: dernst
date_created: 2024-08-05T09:44:49Z
date_updated: 2024-08-05T09:44:49Z
file_id: '17392'
file_name: 2022_NeurIPS_Zhang.pdf
file_size: 476307
relation: main_file
success: 1
file_date_updated: 2024-08-05T09:44:49Z
has_accepted_license: '1'
intvolume: ' 35'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
publication: 36th Conference on Neural Information Processing Systems
publication_identifier:
isbn:
- '9781713871088'
publication_status: published
publisher: ML Research Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Mean estimation in high-dimensional binary Markov Gaussian mixture models
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 35
year: '2022'
...
---
_id: '17088'
abstract:
- lang: eng
text: 'In this paper, we consider the problem of sparsifying BERT models, which
are a key building block for natural language processing, in order to reduce their
storage and computational cost. We introduce the Optimal BERT Surgeon (oBERT),
an efficient and accurate pruning method based on approximate second-order information,
which we show to yield state-of-the-art results in both stages of language tasks:
pre-training and fine-tuning. Specifically, oBERT extends existing work on second-order
pruning by allowing for pruning weight blocks, and is the first such method that
is applicable at BERT scale. Second, we investigate compounding compression approaches
to obtain highly compressed but accurate models for deployment on edge devices.
These models significantly push boundaries of the current state-of-the-art sparse
BERT models with respect to all metrics: model size, inference speed and task
accuracy. For example, relative to the dense BERT-base, we obtain 10x model size
compression with < 1% accuracy drop, 10x CPU-inference speedup with < 2% accuracy
drop, and 29x CPU-inference speedup with < 7.5% accuracy drop. Our code, fully
integrated with Transformers and SparseML, is available at https://github.com/neuralmagic/sparseml/tree/main/research/optimal_BERT_surgeon_oBERT.'
article_processing_charge: Yes
arxiv: 1
author:
- first_name: Eldar
full_name: Kurtic, Eldar
id: 47beb3a5-07b5-11eb-9b87-b108ec578218
last_name: Kurtic
- first_name: Daniel
full_name: Campos, Daniel
last_name: Campos
- first_name: Tuan
full_name: Nguyen, Tuan
last_name: Nguyen
- first_name: Elias
full_name: Frantar, Elias
id: 09a8f98d-ec99-11ea-ae11-c063a7b7fe5f
last_name: Frantar
- first_name: Mark
full_name: Kurtz, Mark
last_name: Kurtz
- first_name: Benjamin
full_name: Fineran, Benjamin
last_name: Fineran
- first_name: Michael
full_name: Goin, Michael
last_name: Goin
- first_name: Dan-Adrian
full_name: Alistarh, Dan-Adrian
id: 4A899BFC-F248-11E8-B48F-1D18A9856A87
last_name: Alistarh
orcid: 0000-0003-3650-940X
citation:
ama: 'Kurtic E, Campos D, Nguyen T, et al. The optimal BERT surgeon: Scalable and
accurate second-order pruning for large language models. In: Proceedings of
the 2022 Conference on Empirical Methods in Natural Language Processing. Association
for Computational Linguistics; 2022:4163-4181. doi:10.18653/v1/2022.emnlp-main.279'
apa: 'Kurtic, E., Campos, D., Nguyen, T., Frantar, E., Kurtz, M., Fineran, B., …
Alistarh, D.-A. (2022). The optimal BERT surgeon: Scalable and accurate second-order
pruning for large language models. In Proceedings of the 2022 Conference on
Empirical Methods in Natural Language Processing (pp. 4163–4181). Abu Dhabi,
United Arab Emirates: Association for Computational Linguistics. https://doi.org/10.18653/v1/2022.emnlp-main.279'
chicago: 'Kurtic, Eldar, Daniel Campos, Tuan Nguyen, Elias Frantar, Mark Kurtz,
Benjamin Fineran, Michael Goin, and Dan-Adrian Alistarh. “The Optimal BERT Surgeon:
Scalable and Accurate Second-Order Pruning for Large Language Models.” In Proceedings
of the 2022 Conference on Empirical Methods in Natural Language Processing,
4163–81. Association for Computational Linguistics, 2022. https://doi.org/10.18653/v1/2022.emnlp-main.279.'
ieee: 'E. Kurtic et al., “The optimal BERT surgeon: Scalable and accurate
second-order pruning for large language models,” in Proceedings of the 2022
Conference on Empirical Methods in Natural Language Processing, Abu Dhabi,
United Arab Emirates, 2022, pp. 4163–4181.'
ista: 'Kurtic E, Campos D, Nguyen T, Frantar E, Kurtz M, Fineran B, Goin M, Alistarh
D-A. 2022. The optimal BERT surgeon: Scalable and accurate second-order pruning
for large language models. Proceedings of the 2022 Conference on Empirical Methods
in Natural Language Processing. EMNLP: Conference on Empirical Methods in Natural
Language Processing, 4163–4181.'
mla: 'Kurtic, Eldar, et al. “The Optimal BERT Surgeon: Scalable and Accurate Second-Order
Pruning for Large Language Models.” Proceedings of the 2022 Conference on Empirical
Methods in Natural Language Processing, Association for Computational Linguistics,
2022, pp. 4163–81, doi:10.18653/v1/2022.emnlp-main.279.'
short: E. Kurtic, D. Campos, T. Nguyen, E. Frantar, M. Kurtz, B. Fineran, M. Goin,
D.-A. Alistarh, in:, Proceedings of the 2022 Conference on Empirical Methods in
Natural Language Processing, Association for Computational Linguistics, 2022,
pp. 4163–4181.
conference:
end_date: 2022-12-11
location: Abu Dhabi, United Arab Emirates
name: 'EMNLP: Conference on Empirical Methods in Natural Language Processing'
start_date: 2022-12-07
corr_author: '1'
date_created: 2024-05-29T06:40:55Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2024-07-31T11:05:32Z
day: '01'
ddc:
- '000'
department:
- _id: DaAl
doi: 10.18653/v1/2022.emnlp-main.279
external_id:
arxiv:
- '2203.07259'
file:
- access_level: open_access
checksum: c47b9edd8a9f743ac77a593de6d2e84a
content_type: application/pdf
creator: dernst
date_created: 2024-07-31T11:03:34Z
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success: 1
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has_accepted_license: '1'
language:
- iso: eng
month: '12'
oa: 1
oa_version: Published Version
page: 4163-4181
publication: Proceedings of the 2022 Conference on Empirical Methods in Natural Language
Processing
publication_status: published
publisher: Association for Computational Linguistics
quality_controlled: '1'
related_material:
link:
- relation: software
url: https://github.com/neuralmagic/sparseml/tree/main/research/optimal_BERT_surgeon_oBERT
scopus_import: '1'
status: public
title: 'The optimal BERT surgeon: Scalable and accurate second-order pruning for large
language models'
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: conference
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
OA_place: repository
_id: '17157'
abstract:
- lang: eng
text: An action of a complex reductive group G on a smooth projective variety X
is regular when all regular unipotent elements in G act with finitely many fixed
points. Then the complex G-equivariant cohomology ring of X is isomorphic to the
coordinate ring of a certain regular fixed point scheme. Examples include partial
flag varieties, smooth Schubert varieties and Bott-Samelson varieties. We also
show that a more general version of the fixed point scheme allows a generalisation
to GKM spaces, such as toric varieties.
article_number: '2212.11836'
article_processing_charge: No
arxiv: 1
author:
- first_name: Tamás
full_name: Hausel, Tamás
id: 4A0666D8-F248-11E8-B48F-1D18A9856A87
last_name: Hausel
orcid: 0000-0002-9582-2634
- first_name: Kamil P
full_name: Rychlewicz, Kamil P
id: 85A07246-A8BF-11E9-B4FA-D9E3E5697425
last_name: Rychlewicz
citation:
ama: Hausel T, Rychlewicz KP. Spectrum of equivariant cohomology as a fixed point
scheme. arXiv. doi:10.48550/arXiv.2212.11836
apa: Hausel, T., & Rychlewicz, K. P. (n.d.). Spectrum of equivariant cohomology
as a fixed point scheme. arXiv. https://doi.org/10.48550/arXiv.2212.11836
chicago: Hausel, Tamás, and Kamil P Rychlewicz. “Spectrum of Equivariant Cohomology
as a Fixed Point Scheme.” ArXiv, n.d. https://doi.org/10.48550/arXiv.2212.11836.
ieee: T. Hausel and K. P. Rychlewicz, “Spectrum of equivariant cohomology as a fixed
point scheme,” arXiv. .
ista: Hausel T, Rychlewicz KP. Spectrum of equivariant cohomology as a fixed point
scheme. arXiv, 2212.11836.
mla: Hausel, Tamás, and Kamil P. Rychlewicz. “Spectrum of Equivariant Cohomology
as a Fixed Point Scheme.” ArXiv, 2212.11836, doi:10.48550/arXiv.2212.11836.
short: T. Hausel, K.P. Rychlewicz, ArXiv (n.d.).
date_created: 2024-06-23T15:01:27Z
date_published: 2022-12-22T00:00:00Z
date_updated: 2026-04-07T12:55:46Z
day: '22'
department:
- _id: GradSch
- _id: TaHa
doi: 10.48550/arXiv.2212.11836
external_id:
arxiv:
- '2212.11836'
fulldoi: https://doi.org/10.48550/arXiv.2212.11836
language:
- iso: eng
main_file_link:
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url: https://doi.org/10.48550/arXiv.2212.11836
month: '12'
oa: 1
oa_version: Preprint
publication: arXiv
publication_status: draft
related_material:
record:
- id: '19071'
relation: later_version
status: public
- id: '17156'
relation: dissertation_contains
status: public
status: public
title: Spectrum of equivariant cohomology as a fixed point scheme
type: preprint
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
DOAJ_listed: '1'
OA_place: publisher
OA_type: gold
_id: '18606'
abstract:
- lang: eng
text: "Shear thickening is an intriguing rheological behaviour which consists in
a brutal increase in the viscosity above a critical shear rate. It is famously
encountered in suspensions of corn starch in water. Despite having been discovered
in the early 1930's, its underlying mechanisms remained a mystery for a long time.
In 2013–14, numerical and theoretical works [[1], [2], [3]] put forward a frictional
transition scenario to explain this phenomenon.\r\nIn this talk, I will present
experimental work investigating this frictional transition scenario. In order
to test the ideas of this model, one has to go further than standard rheological
techniques, since they do not provide access to the frictional state of the measured
suspension. I will thus focus on the techniques that we developed in order to
evidence the frictional transition and link it to the presence of a shear-thickening
behaviour."
acknowledgement: "This talk presents parts of my PhD work, conducted at IUSTI in Marseille
under the supervision of Yoël Forterre and Bloen Metzger. It aslo benefited from
contributions from Antoine Bérut, and some of the data was acquired by Pauline Dame
as part of a summer internship.\r\nThis work was supported by the European Research
Council (ERC) under the European Union Horizon 2020 Research and Innovation program
(ERC Grant 647384) and by the Labex MEC (ANR-10-LABX-0092) under the 647384) and
by the A*MIDEX project (ANR-11-IDEX-0001-02) funded by the French government program
Investissements d'Avenir, and by ANR ScienceFriction (No. ANR-18-CE30-0024)."
article_number: '100038'
article_processing_charge: No
article_type: original
author:
- first_name: Cécile
full_name: Clavaud, Cécile
id: 5f654c5d-04a1-11eb-ab36-ba9ffec58bd8
last_name: Clavaud
orcid: 0000-0002-1843-3803
citation:
ama: 'Clavaud C. Shear thickening in dense suspensions: an experimental study. Science
Talks. 2022;3. doi:10.1016/j.sctalk.2022.100038'
apa: 'Clavaud, C. (2022). Shear thickening in dense suspensions: an experimental
study. Science Talks. Elsevier. https://doi.org/10.1016/j.sctalk.2022.100038'
chicago: 'Clavaud, Cécile. “Shear Thickening in Dense Suspensions: An Experimental
Study.” Science Talks. Elsevier, 2022. https://doi.org/10.1016/j.sctalk.2022.100038.'
ieee: 'C. Clavaud, “Shear thickening in dense suspensions: an experimental study,”
Science Talks, vol. 3. Elsevier, 2022.'
ista: 'Clavaud C. 2022. Shear thickening in dense suspensions: an experimental study.
Science Talks. 3, 100038.'
mla: 'Clavaud, Cécile. “Shear Thickening in Dense Suspensions: An Experimental Study.”
Science Talks, vol. 3, 100038, Elsevier, 2022, doi:10.1016/j.sctalk.2022.100038.'
short: C. Clavaud, Science Talks 3 (2022).
corr_author: '1'
date_created: 2024-12-01T23:01:55Z
date_published: 2022-08-01T00:00:00Z
date_updated: 2024-12-11T09:24:57Z
day: '01'
ddc:
- '530'
department:
- _id: ScWa
doi: 10.1016/j.sctalk.2022.100038
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has_accepted_license: '1'
intvolume: ' 3'
language:
- iso: eng
month: '08'
oa: 1
oa_version: Published Version
publication: Science Talks
publication_identifier:
eissn:
- 2772-5693
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: 'Shear thickening in dense suspensions: an experimental study'
tmp:
image: /images/cc_by_nc_nd.png
legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
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short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
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year: '2022'
...
---
OA_place: publisher
OA_type: gold
_id: '19984'
abstract:
- lang: eng
text: "The first part of this paper is a survey of mathematical results on mirror
symmetry phenomena between Hitchin systems for Langlands dual groups. The second
part introduces\r\nand discusses multiplicity algebras of the Hitchin system on
Lagrangians, and considers\r\ncorresponding conjectural structures on their mirror."
acknowledgement: "The author thanks Nigel Hitchin for introducing him to Higgs bundles
during 1995–1998,\r\nsuggesting the SYZ picture for Langlands dual Hitchin systems
in 1996, and for the\r\nmore recent collaborations [29, 30]. He also thanks David
Ben-Zvi, Pierre-Henri Chaudouard, Pierre Deligne, Ron Donagi, Sergei Gukov, Jochen
Heinloth, Vadim Kaloshin,\r\nJoel Kamnitzer, Gérard Laumon, Anton Mellit, David
Nadler, Andy Neitzke, Ngô Bao\r\nChâu, Michael Thaddeus, Tony Pantev, Du Pei, Richárd
Rimányi, Leonid Rybnikov, Vivek\r\nShende, Balázs Szendrői, András Szenes, Fernando
Rodriguez-Villegas, Edward Witten,\r\nand Zhiwei Yun for discussions about the subjects
in this paper over the years. Thanks are\r\nalso due to Hülya Argüz, Jakub Löwit,
Balázs Szendrői, and Nigel Hitchin for the careful\r\nreading of the paper."
article_processing_charge: No
arxiv: 1
author:
- first_name: Tamás
full_name: Hausel, Tamás
id: 4A0666D8-F248-11E8-B48F-1D18A9856A87
last_name: Hausel
orcid: 0000-0002-9582-2634
citation:
ama: 'Hausel T. Enhanced mirror symmetry for Langlands dual Hitchin systems. In:
International Congress of Mathematicians. EMS Press; 2022:2228-2249. doi:10.4171/icm2022/164'
apa: 'Hausel, T. (2022). Enhanced mirror symmetry for Langlands dual Hitchin systems.
In International Congress of Mathematicians (pp. 2228–2249). virtuel: EMS
Press. https://doi.org/10.4171/icm2022/164'
chicago: Hausel, Tamás. “Enhanced Mirror Symmetry for Langlands Dual Hitchin Systems.”
In International Congress of Mathematicians, 2228–49. EMS Press, 2022.
https://doi.org/10.4171/icm2022/164.
ieee: T. Hausel, “Enhanced mirror symmetry for Langlands dual Hitchin systems,”
in International Congress of Mathematicians, EMS Press, 2022, pp. 2228–2249.
ista: 'Hausel T. 2022.Enhanced mirror symmetry for Langlands dual Hitchin systems.
In: International Congress of Mathematicians. , 2228–2249.'
mla: Hausel, Tamás. “Enhanced Mirror Symmetry for Langlands Dual Hitchin Systems.”
International Congress of Mathematicians, EMS Press, 2022, pp. 2228–49,
doi:10.4171/icm2022/164.
short: T. Hausel, in:, International Congress of Mathematicians, EMS Press, 2022,
pp. 2228–2249.
conference:
end_date: 2022-07-14
location: virtuel
name: 'ICM: International Congress of Mathematicians'
start_date: 2022-07-06
corr_author: '1'
date_created: 2025-07-10T13:13:36Z
date_published: 2022-07-15T00:00:00Z
date_updated: 2025-09-24T09:12:13Z
day: '15'
ddc:
- '510'
department:
- _id: TaHa
doi: 10.4171/icm2022/164
external_id:
arxiv:
- '2112.09455'
file:
- access_level: open_access
checksum: d2b9d4cf51c854f1082d8dc18c5853b1
content_type: application/pdf
creator: dernst
date_created: 2025-09-24T09:05:05Z
date_updated: 2025-09-24T09:05:05Z
file_id: '20387'
file_name: 2022_ICM_Hausel.pdf
file_size: 655370
relation: main_file
success: 1
file_date_updated: 2025-09-24T09:05:05Z
fulldoi: https://doi.org/10.4171/icm2022/164
has_accepted_license: '1'
language:
- iso: eng
month: '07'
oa: 1
oa_version: Published Version
page: 2228-2249
publication: International Congress of Mathematicians
publication_identifier:
eisbn:
- '9783985475582'
isbn:
- '9783985470587'
publication_status: published
publisher: EMS Press
quality_controlled: '1'
status: public
title: Enhanced mirror symmetry for Langlands dual Hitchin systems
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: book_chapter
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
year: '2022'
...
---
_id: '10016'
abstract:
- lang: eng
text: 'Auxin has always been at the forefront of research in plant physiology and
development. Since the earliest contemplations by Julius von Sachs and Charles
Darwin, more than a century-long struggle has been waged to understand its function.
This largely reflects the failures, successes, and inevitable progress in the
entire field of plant signaling and development. Here I present 14 stations on
our long and sometimes mystical journey to understand auxin. These highlights
were selected to give a flavor of the field and to show the scope and limits of
our current knowledge. A special focus is put on features that make auxin unique
among phytohormones, such as its dynamic, directional transport network, which
integrates external and internal signals, including self-organizing feedback.
Accented are persistent mysteries and controversies. The unexpected discoveries
related to rapid auxin responses and growth regulation recently disturbed our
contentment regarding understanding of the auxin signaling mechanism. These new
revelations, along with advances in technology, usher us into a new, exciting
era in auxin research. '
acknowledgement: "The author thanks the whole community of researchers consciously
or unconsciously working on questions related to auxin, whose hard work and enthusiasm
contributed to development of this exciting story. Particular thanks go to many\r\nbrilliant
present and past members of the Friml group and our numerous excellent collaborators,
without whom my own personal journey would not be possible. The way of the cross
with its 14 stations is a popular devotion among Roman Catholics and inspires them
to make a spiritual pilgrimage through contemplation of Christ on his last day.
Its aspects of gradual progress, struggle, passion, and revelation served as an
inspiration for the formal depiction of our journey to understanding auxin as described
in this review. It is in no way intended to reflect the personal beliefs of the
author and readers. I am grateful to Nick Barton, Eva Benková, Lenka Caisová, Matyáš
Fendrych, Lukáš Fiedler, Monika Frátriková, Jarmila Frimlová, Michelle Gallei, Jakub
Hajný, Lukas Hoermayer, Alexandra Mally, Ondrˇej Novák, Jan Petrášek, Aleš Pěnčík,
Steffen Vanneste, Tongda Xu, and Zhenbiao Yang for their valuable comments. Special
thanks go to Michelle Gallei for her invaluable assistance with the figures."
article_number: a039859
article_processing_charge: No
article_type: review
author:
- first_name: Jiří
full_name: Friml, Jiří
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
citation:
ama: Friml J. Fourteen stations of auxin. Cold Spring Harbor Perspectives in
Biology. 2022;14(5). doi:10.1101/cshperspect.a039859
apa: Friml, J. (2022). Fourteen stations of auxin. Cold Spring Harbor Perspectives
in Biology. Cold Spring Harbor Laboratory Press. https://doi.org/10.1101/cshperspect.a039859
chicago: Friml, Jiří. “Fourteen Stations of Auxin.” Cold Spring Harbor Perspectives
in Biology. Cold Spring Harbor Laboratory Press, 2022. https://doi.org/10.1101/cshperspect.a039859.
ieee: J. Friml, “Fourteen stations of auxin,” Cold Spring Harbor Perspectives
in Biology, vol. 14, no. 5. Cold Spring Harbor Laboratory Press, 2022.
ista: Friml J. 2022. Fourteen stations of auxin. Cold Spring Harbor Perspectives
in Biology. 14(5), a039859.
mla: Friml, Jiří. “Fourteen Stations of Auxin.” Cold Spring Harbor Perspectives
in Biology, vol. 14, no. 5, a039859, Cold Spring Harbor Laboratory Press,
2022, doi:10.1101/cshperspect.a039859.
short: J. Friml, Cold Spring Harbor Perspectives in Biology 14 (2022).
corr_author: '1'
date_created: 2021-09-14T11:36:53Z
date_published: 2022-05-27T00:00:00Z
date_updated: 2026-06-18T08:35:48Z
day: '27'
ddc:
- '580'
department:
- _id: JiFr
doi: 10.1101/cshperspect.a039859
external_id:
isi:
- '000806563000003'
pmid:
- '34400554'
fulldoi: https://doi.org/10.1101/cshperspect.a039859
intvolume: ' 14'
isi: 1
issue: '5'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: 'https://doi.org/10.1101/cshperspect.a039859 '
month: '05'
oa: 1
oa_version: Published Version
pmid: 1
publication: Cold Spring Harbor Perspectives in Biology
publication_identifier:
issn:
- 1943-0264
publication_status: published
publisher: Cold Spring Harbor Laboratory Press
quality_controlled: '1'
scopus_import: '1'
status: public
title: Fourteen stations of auxin
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 14
year: '2022'
...
---
_id: '10181'
abstract:
- lang: eng
text: In this article we study some geometric properties of proximally smooth sets.
First, we introduce a modification of the metric projection and prove its existence.
Then we provide an algorithm for constructing a rectifiable curve between two
sufficiently close points of a proximally smooth set in a uniformly convex and
uniformly smooth Banach space, with the moduli of smoothness and convexity of
power type. Our algorithm returns a reasonably short curve between two sufficiently
close points of a proximally smooth set, is iterative and uses our modification
of the metric projection. We estimate the length of the constructed curve and
its deviation from the segment with the same endpoints. These estimates coincide
up to a constant factor with those for the geodesics in a proximally smooth set
in a Hilbert space.
acknowledgement: Theorem 2 was obtained at Steklov Mathematical Institute RAS and
supported by Russian Science Foundation, grant N 19-11-00087.
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Grigory
full_name: Ivanov, Grigory
id: 87744F66-5C6F-11EA-AFE0-D16B3DDC885E
last_name: Ivanov
orcid: 0000-0002-5021-3982
- first_name: Mariana S.
full_name: Lopushanski, Mariana S.
last_name: Lopushanski
citation:
ama: Ivanov G, Lopushanski MS. Rectifiable curves in proximally smooth sets. Set-Valued
and Variational Analysis. 2022;30(2):657-675. doi:10.1007/s11228-021-00612-1
apa: Ivanov, G., & Lopushanski, M. S. (2022). Rectifiable curves in proximally
smooth sets. Set-Valued and Variational Analysis. Springer Nature. https://doi.org/10.1007/s11228-021-00612-1
chicago: Ivanov, Grigory, and Mariana S. Lopushanski. “Rectifiable Curves in Proximally
Smooth Sets.” Set-Valued and Variational Analysis. Springer Nature, 2022.
https://doi.org/10.1007/s11228-021-00612-1.
ieee: G. Ivanov and M. S. Lopushanski, “Rectifiable curves in proximally smooth
sets,” Set-Valued and Variational Analysis, vol. 30, no. 2. Springer Nature,
pp. 657–675, 2022.
ista: Ivanov G, Lopushanski MS. 2022. Rectifiable curves in proximally smooth sets.
Set-Valued and Variational Analysis. 30(2), 657–675.
mla: Ivanov, Grigory, and Mariana S. Lopushanski. “Rectifiable Curves in Proximally
Smooth Sets.” Set-Valued and Variational Analysis, vol. 30, no. 2, Springer
Nature, 2022, pp. 657–75, doi:10.1007/s11228-021-00612-1.
short: G. Ivanov, M.S. Lopushanski, Set-Valued and Variational Analysis 30 (2022)
657–675.
date_created: 2021-10-24T22:01:35Z
date_published: 2022-06-01T00:00:00Z
date_updated: 2026-06-18T08:36:30Z
day: '01'
ddc:
- '500'
department:
- _id: UlWa
doi: 10.1007/s11228-021-00612-1
external_id:
arxiv:
- '2012.10691'
isi:
- '000705774800001'
fulldoi: https://doi.org/10.1007/s11228-021-00612-1
intvolume: ' 30'
isi: 1
issue: '2'
language:
- iso: eng
main_file_link:
- open_access: '1'
url: https://arxiv.org/abs/2012.10691
month: '06'
oa: 1
oa_version: Published Version
page: 657-675
publication: Set-Valued and Variational Analysis
publication_identifier:
eissn:
- 1877-0541
issn:
- 0927-6947
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Rectifiable curves in proximally smooth sets
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 30
year: '2022'
...
---
_id: '10182'
abstract:
- lang: eng
text: The mitochondrial oxidative phosphorylation system is central to cellular
metabolism. It comprises five enzymatic complexes and two mobile electron carriers
that work in a mitochondrial respiratory chain. By coupling the oxidation of reducing
equivalents coming into mitochondria to the generation and subsequent dissipation
of a proton gradient across the inner mitochondrial membrane, this electron transport
chain drives the production of ATP, which is then used as a primary energy carrier
in virtually all cellular processes. Minimal perturbations of the respiratory
chain activity are linked to diseases; therefore, it is necessary to understand
how these complexes are assembled and regulated and how they function. In this
Review, we outline the latest assembly models for each individual complex, and
we also highlight the recent discoveries indicating that the formation of larger
assemblies, known as respiratory supercomplexes, originates from the association
of the intermediates of individual complexes. We then discuss how recent cryo-electron
microscopy structures have been key to answering open questions on the function
of the electron transport chain in mitochondrial respiration and how supercomplexes
and other factors, including metabolites, can regulate the activity of the single
complexes. When relevant, we discuss how these mechanisms contribute to physiology
and outline their deregulation in human diseases.
article_processing_charge: No
article_type: original
author:
- first_name: Irene
full_name: Vercellino, Irene
id: 3ED6AF16-F248-11E8-B48F-1D18A9856A87
last_name: Vercellino
orcid: ' 0000-0001-5618-3449'
- first_name: Leonid A
full_name: Sazanov, Leonid A
id: 338D39FE-F248-11E8-B48F-1D18A9856A87
last_name: Sazanov
orcid: 0000-0002-0977-7989
citation:
ama: Vercellino I, Sazanov LA. The assembly, regulation and function of the mitochondrial
respiratory chain. Nature Reviews Molecular Cell Biology. 2022;23:141–161.
doi:10.1038/s41580-021-00415-0
apa: Vercellino, I., & Sazanov, L. A. (2022). The assembly, regulation and function
of the mitochondrial respiratory chain. Nature Reviews Molecular Cell Biology.
Springer Nature. https://doi.org/10.1038/s41580-021-00415-0
chicago: Vercellino, Irene, and Leonid A Sazanov. “The Assembly, Regulation and
Function of the Mitochondrial Respiratory Chain.” Nature Reviews Molecular
Cell Biology. Springer Nature, 2022. https://doi.org/10.1038/s41580-021-00415-0.
ieee: I. Vercellino and L. A. Sazanov, “The assembly, regulation and function of
the mitochondrial respiratory chain,” Nature Reviews Molecular Cell Biology,
vol. 23. Springer Nature, pp. 141–161, 2022.
ista: Vercellino I, Sazanov LA. 2022. The assembly, regulation and function of the
mitochondrial respiratory chain. Nature Reviews Molecular Cell Biology. 23, 141–161.
mla: Vercellino, Irene, and Leonid A. Sazanov. “The Assembly, Regulation and Function
of the Mitochondrial Respiratory Chain.” Nature Reviews Molecular Cell Biology,
vol. 23, Springer Nature, 2022, pp. 141–161, doi:10.1038/s41580-021-00415-0.
short: I. Vercellino, L.A. Sazanov, Nature Reviews Molecular Cell Biology 23 (2022)
141–161.
corr_author: '1'
date_created: 2021-10-24T22:01:35Z
date_published: 2022-02-01T00:00:00Z
date_updated: 2024-10-09T21:01:03Z
day: '01'
department:
- _id: LeSa
doi: 10.1038/s41580-021-00415-0
external_id:
isi:
- '000705697100001'
pmid:
- '34621061'
fulldoi: https://doi.org/10.1038/s41580-021-00415-0
intvolume: ' 23'
isi: 1
language:
- iso: eng
month: '02'
oa_version: None
page: 141–161
pmid: 1
publication: Nature Reviews Molecular Cell Biology
publication_identifier:
eissn:
- 1471-0080
issn:
- 1471-0072
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: The assembly, regulation and function of the mitochondrial respiratory chain
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 23
year: '2022'
...
---
_id: '10211'
abstract:
- lang: eng
text: "We study the problem of recovering an unknown signal \U0001D465\U0001D465
given measurements obtained from a generalized linear model with a Gaussian sensing
matrix. Two popular solutions are based on a linear estimator \U0001D465\U0001D465^L
and a spectral estimator \U0001D465\U0001D465^s. The former is a data-dependent
linear combination of the columns of the measurement matrix, and its analysis
is quite simple. The latter is the principal eigenvector of a data-dependent matrix,
and a recent line of work has studied its performance. In this paper, we show
how to optimally combine \U0001D465\U0001D465^L and \U0001D465\U0001D465^s. At
the heart of our analysis is the exact characterization of the empirical joint
distribution of (\U0001D465\U0001D465,\U0001D465\U0001D465^L,\U0001D465\U0001D465^s)
in the high-dimensional limit. This allows us to compute the Bayes-optimal combination
of \U0001D465\U0001D465^L and \U0001D465\U0001D465^s, given the limiting distribution
of the signal \U0001D465\U0001D465. When the distribution of the signal is Gaussian,
then the Bayes-optimal combination has the form \U0001D703\U0001D465\U0001D465^L+\U0001D465\U0001D465^s
and we derive the optimal combination coefficient. In order to establish the limiting
distribution of (\U0001D465\U0001D465,\U0001D465\U0001D465^L,\U0001D465\U0001D465^s),
we design and analyze an approximate message passing algorithm whose iterates
give \U0001D465\U0001D465^L and approach \U0001D465\U0001D465^s. Numerical simulations
demonstrate the improvement of the proposed combination with respect to the two
methods considered separately."
acknowledgement: M. Mondelli would like to thank Andrea Montanari for helpful discussions.
All the authors would like to thank the anonymous reviewers for their helpful comments.
article_processing_charge: Yes (via OA deal)
article_type: original
arxiv: 1
author:
- first_name: Marco
full_name: Mondelli, Marco
id: 27EB676C-8706-11E9-9510-7717E6697425
last_name: Mondelli
orcid: 0000-0002-3242-7020
- first_name: Christos
full_name: Thrampoulidis, Christos
last_name: Thrampoulidis
- first_name: Ramji
full_name: Venkataramanan, Ramji
last_name: Venkataramanan
citation:
ama: Mondelli M, Thrampoulidis C, Venkataramanan R. Optimal combination of linear
and spectral estimators for generalized linear models. Foundations of Computational
Mathematics. 2022;22(5):1513-1566. doi:10.1007/s10208-021-09531-x
apa: Mondelli, M., Thrampoulidis, C., & Venkataramanan, R. (2022). Optimal combination
of linear and spectral estimators for generalized linear models. Foundations
of Computational Mathematics. Springer. https://doi.org/10.1007/s10208-021-09531-x
chicago: Mondelli, Marco, Christos Thrampoulidis, and Ramji Venkataramanan. “Optimal
Combination of Linear and Spectral Estimators for Generalized Linear Models.”
Foundations of Computational Mathematics. Springer, 2022. https://doi.org/10.1007/s10208-021-09531-x.
ieee: M. Mondelli, C. Thrampoulidis, and R. Venkataramanan, “Optimal combination
of linear and spectral estimators for generalized linear models,” Foundations
of Computational Mathematics, vol. 22, no. 5. Springer, pp. 1513–1566, 2022.
ista: Mondelli M, Thrampoulidis C, Venkataramanan R. 2022. Optimal combination of
linear and spectral estimators for generalized linear models. Foundations of Computational
Mathematics. 22(5), 1513–1566.
mla: Mondelli, Marco, et al. “Optimal Combination of Linear and Spectral Estimators
for Generalized Linear Models.” Foundations of Computational Mathematics,
vol. 22, no. 5, Springer, 2022, pp. 1513–66, doi:10.1007/s10208-021-09531-x.
short: M. Mondelli, C. Thrampoulidis, R. Venkataramanan, Foundations of Computational
Mathematics 22 (2022) 1513–1566.
date_created: 2021-11-03T10:59:08Z
date_published: 2022-10-01T00:00:00Z
date_updated: 2025-04-15T06:53:08Z
day: '01'
ddc:
- '510'
department:
- _id: MaMo
doi: 10.1007/s10208-021-09531-x
external_id:
arxiv:
- '2008.03326'
isi:
- '000685721000001'
file:
- access_level: open_access
checksum: 9ea12dd8045a0678000a3a59295221cb
content_type: application/pdf
creator: alisjak
date_created: 2021-12-13T15:47:54Z
date_updated: 2021-12-13T15:47:54Z
file_id: '10542'
file_name: 2021_Springer_Mondelli.pdf
file_size: 2305731
relation: main_file
success: 1
file_date_updated: 2021-12-13T15:47:54Z
fulldoi: https://doi.org/10.1007/s10208-021-09531-x
has_accepted_license: '1'
intvolume: ' 22'
isi: 1
issue: '5'
keyword:
- Applied Mathematics
- Computational Theory and Mathematics
- Computational Mathematics
- Analysis
language:
- iso: eng
month: '10'
oa: 1
oa_version: Published Version
page: 1513-1566
project:
- _id: B67AFEDC-15C9-11EA-A837-991A96BB2854
name: IST Austria Open Access Fund
publication: Foundations of Computational Mathematics
publication_identifier:
eissn:
- 1615-3383
issn:
- 1615-3375
publication_status: published
publisher: Springer
quality_controlled: '1'
scopus_import: '1'
status: public
title: Optimal combination of linear and spectral estimators for generalized linear
models
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 3E5EF7F0-F248-11E8-B48F-1D18A9856A87
volume: 22
year: '2022'
...
---
_id: '10284'
abstract:
- lang: eng
text: Infections early in life can have enduring effects on an organism's development
and immunity. In this study, we show that this equally applies to developing ‘superorganisms’––incipient
social insect colonies. When we exposed newly mated Lasius niger ant queens to
a low pathogen dose, their colonies grew more slowly than controls before winter,
but reached similar sizes afterwards. Independent of exposure, queen hibernation
survival improved when the ratio of pupae to workers was small. Queens that reared
fewer pupae before worker emergence exhibited lower pathogen levels, indicating
that high brood rearing efforts interfere with the ability of the queen's immune
system to suppress pathogen proliferation. Early-life queen pathogen exposure
also improved the immunocompetence of her worker offspring, as demonstrated by
challenging the workers to the same pathogen a year later. Transgenerational transfer
of the queen's pathogen experience to her workforce can hence durably reduce the
disease susceptibility of the whole superorganism.
acknowledged_ssus:
- _id: ScienComp
acknowledgement: The authors are grateful to G. Tkačik and V. Mireles for advice on
data analyses and to A. Schloegl for help using the IST Austria HPC cluster for
data processing. The authors thank J. Eilenberg for providing the fungal strain
and A.V. Grasse for support with the molecular analysis. The authors also thank
the Social Immunity group at IST Austria, in particular B. Milutinović, for discussions
throughout and comments on the manuscript.
article_processing_charge: Yes (via OA deal)
article_type: original
author:
- first_name: Barbara E
full_name: Casillas Perez, Barbara E
id: 351ED2AA-F248-11E8-B48F-1D18A9856A87
last_name: Casillas Perez
- first_name: Christopher
full_name: Pull, Christopher
id: 3C7F4840-F248-11E8-B48F-1D18A9856A87
last_name: Pull
orcid: 0000-0003-1122-3982
- first_name: Filip
full_name: Naiser, Filip
last_name: Naiser
- first_name: Elisabeth
full_name: Naderlinger, Elisabeth
id: 31757262-F248-11E8-B48F-1D18A9856A87
last_name: Naderlinger
- first_name: Jiri
full_name: Matas, Jiri
last_name: Matas
- first_name: Sylvia
full_name: Cremer, Sylvia
id: 2F64EC8C-F248-11E8-B48F-1D18A9856A87
last_name: Cremer
orcid: 0000-0002-2193-3868
citation:
ama: Casillas Perez BE, Pull C, Naiser F, Naderlinger E, Matas J, Cremer S. Early
queen infection shapes developmental dynamics and induces long-term disease protection
in incipient ant colonies. Ecology Letters. 2022;25(1):89-100. doi:10.1111/ele.13907
apa: Casillas Perez, B. E., Pull, C., Naiser, F., Naderlinger, E., Matas, J., &
Cremer, S. (2022). Early queen infection shapes developmental dynamics and induces
long-term disease protection in incipient ant colonies. Ecology Letters.
Wiley. https://doi.org/10.1111/ele.13907
chicago: Casillas Perez, Barbara E, Christopher Pull, Filip Naiser, Elisabeth Naderlinger,
Jiri Matas, and Sylvia Cremer. “Early Queen Infection Shapes Developmental Dynamics
and Induces Long-Term Disease Protection in Incipient Ant Colonies.” Ecology
Letters. Wiley, 2022. https://doi.org/10.1111/ele.13907.
ieee: B. E. Casillas Perez, C. Pull, F. Naiser, E. Naderlinger, J. Matas, and S.
Cremer, “Early queen infection shapes developmental dynamics and induces long-term
disease protection in incipient ant colonies,” Ecology Letters, vol. 25,
no. 1. Wiley, pp. 89–100, 2022.
ista: Casillas Perez BE, Pull C, Naiser F, Naderlinger E, Matas J, Cremer S. 2022.
Early queen infection shapes developmental dynamics and induces long-term disease
protection in incipient ant colonies. Ecology Letters. 25(1), 89–100.
mla: Casillas Perez, Barbara E., et al. “Early Queen Infection Shapes Developmental
Dynamics and Induces Long-Term Disease Protection in Incipient Ant Colonies.”
Ecology Letters, vol. 25, no. 1, Wiley, 2022, pp. 89–100, doi:10.1111/ele.13907.
short: B.E. Casillas Perez, C. Pull, F. Naiser, E. Naderlinger, J. Matas, S. Cremer,
Ecology Letters 25 (2022) 89–100.
corr_author: '1'
date_created: 2021-11-14T23:01:25Z
date_published: 2022-01-01T00:00:00Z
date_updated: 2025-04-14T13:55:31Z
day: '01'
ddc:
- '573'
department:
- _id: SyCr
doi: 10.1111/ele.13907
ec_funded: 1
external_id:
isi:
- '000713396100001'
pmid:
- '34725912'
file:
- access_level: open_access
checksum: 0bd4210400e9876609b7c538ab4f9a3c
content_type: application/pdf
creator: cchlebak
date_created: 2022-02-03T13:37:11Z
date_updated: 2022-02-03T13:37:11Z
file_id: '10721'
file_name: 2021_EcologyLetters_CasillasPerez.pdf
file_size: 700087
relation: main_file
success: 1
file_date_updated: 2022-02-03T13:37:11Z
fulldoi: https://doi.org/10.1111/ele.13907
has_accepted_license: '1'
intvolume: ' 25'
isi: 1
issue: '1'
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: 89-100
pmid: 1
project:
- _id: 2649B4DE-B435-11E9-9278-68D0E5697425
call_identifier: H2020
grant_number: '771402'
name: Epidemics in ant societies on a chip
publication: Ecology Letters
publication_identifier:
eissn:
- 1461-0248
issn:
- 1461-023X
publication_status: published
publisher: Wiley
quality_controlled: '1'
related_material:
record:
- id: '13061'
relation: research_data
status: public
scopus_import: '1'
status: public
title: Early queen infection shapes developmental dynamics and induces long-term disease
protection in incipient ant colonies
tmp:
image: /images/cc_by.png
legal_code_url: https://creativecommons.org/licenses/by/4.0/legalcode
name: Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)
short: CC BY (4.0)
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 25
year: '2022'
...
---
_id: '10335'
abstract:
- lang: eng
text: "Van der Holst and Pendavingh introduced a graph parameter σ, which coincides
with the more famous Colin de Verdière graph parameter μ for small values. However,
the definition of a is much more geometric/topological directly reflecting embeddability
properties of the graph. They proved μ(G) ≤ σ(G) + 2 and conjectured σ(G) ≤ σ(G)
for any graph G. We confirm this conjecture. As far as we know, this is the first
topological upper bound on σ(G) which is, in general, tight.\r\nEquality between
μ and σ does not hold in general as van der Holst and Pendavingh showed that there
is a graph G with μ(G) ≤ 18 and σ(G) ≥ 20. We show that the gap appears at much
smaller values, namely, we exhibit a graph H for which μ(H) ≥ 7 and σ(H) ≥ 8.
We also prove that, in general, the gap can be large: The incidence graphs Hq
of finite projective planes of order q satisfy μ(Hq) ∈ O(q3/2) and σ(Hq) ≥ q2."
acknowledgement: 'V. K. gratefully acknowledges the support of Austrian Science Fund
(FWF): P 30902-N35. This work was done mostly while he was employed at the University
of Innsbruck. During the early stage of this research, V. K. was partially supported
by Charles University project GAUK 926416. M. T. is supported by the grant no. 19-04113Y
of the Czech Science Foundation(GA ˇCR) and partially supported by Charles University
project UNCE/SCI/004.'
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Vojtech
full_name: Kaluza, Vojtech
id: 21AE5134-9EAC-11EA-BEA2-D7BD3DDC885E
last_name: Kaluza
orcid: 0000-0002-2512-8698
- first_name: Martin
full_name: Tancer, Martin
id: 38AC689C-F248-11E8-B48F-1D18A9856A87
last_name: Tancer
orcid: 0000-0002-1191-6714
citation:
ama: Kaluza V, Tancer M. Even maps, the Colin de Verdière number and representations
of graphs. Combinatorica. 2022;42:1317-1345. doi:10.1007/s00493-021-4443-7
apa: Kaluza, V., & Tancer, M. (2022). Even maps, the Colin de Verdière number
and representations of graphs. Combinatorica. Springer Nature. https://doi.org/10.1007/s00493-021-4443-7
chicago: Kaluza, Vojtech, and Martin Tancer. “Even Maps, the Colin de Verdière Number
and Representations of Graphs.” Combinatorica. Springer Nature, 2022. https://doi.org/10.1007/s00493-021-4443-7.
ieee: V. Kaluza and M. Tancer, “Even maps, the Colin de Verdière number and representations
of graphs,” Combinatorica, vol. 42. Springer Nature, pp. 1317–1345, 2022.
ista: Kaluza V, Tancer M. 2022. Even maps, the Colin de Verdière number and representations
of graphs. Combinatorica. 42, 1317–1345.
mla: Kaluza, Vojtech, and Martin Tancer. “Even Maps, the Colin de Verdière Number
and Representations of Graphs.” Combinatorica, vol. 42, Springer Nature,
2022, pp. 1317–45, doi:10.1007/s00493-021-4443-7.
short: V. Kaluza, M. Tancer, Combinatorica 42 (2022) 1317–1345.
corr_author: '1'
date_created: 2021-11-25T13:49:16Z
date_published: 2022-12-01T00:00:00Z
date_updated: 2024-10-09T20:53:51Z
day: '01'
ddc:
- '514'
- '516'
department:
- _id: UlWa
doi: 10.1007/s00493-021-4443-7
external_id:
arxiv:
- '1907.05055'
isi:
- '000798210100003'
fulldoi: https://doi.org/10.1007/s00493-021-4443-7
intvolume: ' 42'
isi: 1
language:
- iso: eng
main_file_link:
- open_access: '1'
url: ' https://doi.org/10.48550/arXiv.1907.05055'
month: '12'
oa: 1
oa_version: Preprint
page: 1317-1345
publication: Combinatorica
publication_identifier:
issn:
- 0209-9683
publication_status: published
publisher: Springer Nature
quality_controlled: '1'
scopus_import: '1'
status: public
title: Even maps, the Colin de Verdière number and representations of graphs
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 42
year: '2022'
...
---
_id: '10411'
abstract:
- lang: eng
text: The phytohormone auxin is the major growth regulator governing tropic responses
including gravitropism. Auxin build-up at the lower side of stimulated shoots
promotes cell expansion, whereas in roots it inhibits growth, leading to upward
shoot bending and downward root bending, respectively. Yet it remains an enigma
how the same signal can trigger such opposite cellular responses. In this review,
we discuss several recent unexpected insights into the mechanisms underlying auxin
regulation of growth, challenging several existing models. We focus on the divergent
mechanisms of apoplastic pH regulation in shoots and roots revisiting the classical
Acid Growth Theory and discuss coordinated involvement of multiple auxin signaling
pathways. From this emerges a more comprehensive, updated picture how auxin regulates
growth.
acknowledgement: The authors thank Alexandra Mally for editing the text. This work
was supported by the Austrian Science Fund (FWF) I 3630-B25 to Jiří Friml and the
DOC Fellowship of the Austrian Academy of Sciences to Lanxin Li. All figures were
created with BioRender.com.
article_processing_charge: No
article_type: original
author:
- first_name: Lanxin
full_name: Li, Lanxin
id: 367EF8FA-F248-11E8-B48F-1D18A9856A87
last_name: Li
orcid: 0000-0002-5607-272X
- first_name: Michelle C
full_name: Gallei, Michelle C
id: 35A03822-F248-11E8-B48F-1D18A9856A87
last_name: Gallei
orcid: 0000-0003-1286-7368
- first_name: Jiří
full_name: Friml, Jiří
id: 4159519E-F248-11E8-B48F-1D18A9856A87
last_name: Friml
orcid: 0000-0002-8302-7596
citation:
ama: 'Li L, Gallei MC, Friml J. Bending to auxin: Fast acid growth for tropisms.
Trends in Plant Science. 2022;27(5):440-449. doi:10.1016/j.tplants.2021.11.006'
apa: 'Li, L., Gallei, M. C., & Friml, J. (2022). Bending to auxin: Fast acid
growth for tropisms. Trends in Plant Science. Cell Press. https://doi.org/10.1016/j.tplants.2021.11.006'
chicago: 'Li, Lanxin, Michelle C Gallei, and Jiří Friml. “Bending to Auxin: Fast
Acid Growth for Tropisms.” Trends in Plant Science. Cell Press, 2022. https://doi.org/10.1016/j.tplants.2021.11.006.'
ieee: 'L. Li, M. C. Gallei, and J. Friml, “Bending to auxin: Fast acid growth for
tropisms,” Trends in Plant Science, vol. 27, no. 5. Cell Press, pp. 440–449,
2022.'
ista: 'Li L, Gallei MC, Friml J. 2022. Bending to auxin: Fast acid growth for tropisms.
Trends in Plant Science. 27(5), 440–449.'
mla: 'Li, Lanxin, et al. “Bending to Auxin: Fast Acid Growth for Tropisms.” Trends
in Plant Science, vol. 27, no. 5, Cell Press, 2022, pp. 440–49, doi:10.1016/j.tplants.2021.11.006.'
short: L. Li, M.C. Gallei, J. Friml, Trends in Plant Science 27 (2022) 440–449.
corr_author: '1'
date_created: 2021-12-05T23:01:43Z
date_published: 2022-05-01T00:00:00Z
date_updated: 2026-04-07T14:18:57Z
day: '01'
ddc:
- '580'
department:
- _id: JiFr
doi: 10.1016/j.tplants.2021.11.006
external_id:
isi:
- '000793707900005'
pmid:
- '34848141'
file:
- access_level: open_access
checksum: 3d94980ee1ff6bec100dd813f6a921a6
content_type: application/pdf
creator: amally
date_created: 2023-11-02T17:00:03Z
date_updated: 2023-11-02T17:00:03Z
file_id: '14480'
file_name: Li Plants 2021_accepted.pdf
file_size: 805779
relation: main_file
success: 1
file_date_updated: 2023-11-02T17:00:03Z
fulldoi: https://doi.org/10.1016/j.tplants.2021.11.006
has_accepted_license: '1'
intvolume: ' 27'
isi: 1
issue: '5'
language:
- iso: eng
month: '05'
oa: 1
oa_version: Submitted Version
page: 440-449
pmid: 1
project:
- _id: 26538374-B435-11E9-9278-68D0E5697425
call_identifier: FWF
grant_number: I03630
name: Molecular mechanisms of endocytic cargo recognition in plants
- _id: 26B4D67E-B435-11E9-9278-68D0E5697425
grant_number: '25351'
name: 'A Case Study of Plant Growth Regulation: Molecular Mechanism of Auxin-mediated
Rapid Growth Inhibition in Arabidopsis Root'
publication: Trends in Plant Science
publication_identifier:
issn:
- 1360-1385
publication_status: published
publisher: Cell Press
quality_controlled: '1'
related_material:
record:
- id: '11626'
relation: dissertation_contains
status: public
scopus_import: '1'
status: public
title: 'Bending to auxin: Fast acid growth for tropisms'
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 27
year: '2022'
...
---
_id: '10413'
abstract:
- lang: eng
text: Motivated by the recent introduction of the intrinsic semilattice entropy,
we study generalized quasi-metric semilattices and their categories. We investigate
the relationship between these objects and generalized semivaluations, extending
Nakamura and Schellekens' approach. Finally, we use this correspondence to compare
the intrinsic semilattice entropy and the semigroup entropy induced in particular
situations, like sets, torsion abelian groups and vector spaces.
acknowledgement: Dedicated to the memory of Hans-Peter Künzi.
article_number: '107916'
article_processing_charge: No
article_type: original
author:
- first_name: Dikran
full_name: Dikranjan, Dikran
last_name: Dikranjan
- first_name: Anna
full_name: Giordano Bruno, Anna
last_name: Giordano Bruno
- first_name: Hans Peter
full_name: Künzi, Hans Peter
last_name: Künzi
- first_name: Nicolò
full_name: Zava, Nicolò
id: c8b3499c-7a77-11eb-b046-aa368cbbf2ad
last_name: Zava
orcid: 0000-0001-8686-1888
- first_name: Daniele
full_name: Toller, Daniele
last_name: Toller
citation:
ama: Dikranjan D, Giordano Bruno A, Künzi HP, Zava N, Toller D. Generalized quasi-metric
semilattices. Topology and its Applications. 2022;309. doi:10.1016/j.topol.2021.107916
apa: Dikranjan, D., Giordano Bruno, A., Künzi, H. P., Zava, N., & Toller, D.
(2022). Generalized quasi-metric semilattices. Topology and Its Applications.
Elsevier. https://doi.org/10.1016/j.topol.2021.107916
chicago: Dikranjan, Dikran, Anna Giordano Bruno, Hans Peter Künzi, Nicolò Zava,
and Daniele Toller. “Generalized Quasi-Metric Semilattices.” Topology and Its
Applications. Elsevier, 2022. https://doi.org/10.1016/j.topol.2021.107916.
ieee: D. Dikranjan, A. Giordano Bruno, H. P. Künzi, N. Zava, and D. Toller, “Generalized
quasi-metric semilattices,” Topology and its Applications, vol. 309. Elsevier,
2022.
ista: Dikranjan D, Giordano Bruno A, Künzi HP, Zava N, Toller D. 2022. Generalized
quasi-metric semilattices. Topology and its Applications. 309, 107916.
mla: Dikranjan, Dikran, et al. “Generalized Quasi-Metric Semilattices.” Topology
and Its Applications, vol. 309, 107916, Elsevier, 2022, doi:10.1016/j.topol.2021.107916.
short: D. Dikranjan, A. Giordano Bruno, H.P. Künzi, N. Zava, D. Toller, Topology
and Its Applications 309 (2022).
corr_author: '1'
date_created: 2021-12-05T23:01:44Z
date_published: 2022-03-15T00:00:00Z
date_updated: 2024-10-09T21:01:16Z
day: '15'
department:
- _id: HeEd
doi: 10.1016/j.topol.2021.107916
external_id:
isi:
- '000791838800012'
fulldoi: https://doi.org/10.1016/j.topol.2021.107916
intvolume: ' 309'
isi: 1
language:
- iso: eng
month: '03'
oa_version: None
publication: Topology and its Applications
publication_identifier:
issn:
- 0166-8641
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Generalized quasi-metric semilattices
type: journal_article
user_id: 4359f0d1-fa6c-11eb-b949-802e58b17ae8
volume: 309
year: '2022'
...
---
_id: '10530'
abstract:
- lang: eng
text: "Cell dispersion from a confined area is fundamental in a number of biological
processes,\r\nincluding cancer metastasis. To date, a quantitative understanding
of the interplay of single\r\ncell motility, cell proliferation, and intercellular
contacts remains elusive. In particular, the role\r\nof E- and N-Cadherin junctions,
central components of intercellular contacts, is still\r\ncontroversial. Combining
theoretical modeling with in vitro observations, we investigate the\r\ncollective
spreading behavior of colonies of human cancer cells (T24). The spreading of these\r\ncolonies
is driven by stochastic single-cell migration with frequent transient cell-cell
contacts.\r\nWe find that inhibition of E- and N-Cadherin junctions decreases
colony spreading and average\r\nspreading velocities, without affecting the strength
of correlations in spreading velocities of\r\nneighboring cells. Based on a biophysical
simulation model for cell migration, we show that the\r\nbehavioral changes upon
disruption of these junctions can be explained by reduced repulsive\r\nexcluded
volume interactions between cells. This suggests that in cancer cell migration,\r\ncadherin-based
intercellular contacts sharpen cell boundaries leading to repulsive rather than\r\ncohesive
interactions between cells, thereby promoting efficient cell spreading during
collective\r\nmigration.\r\n"
acknowledgement: Funded by the Deutsche Forschungsgemeinschaft (DFG, German Research
Foundation) - Project-ID 201269156 - SFB 1032 (Projects B8 and B12). D.B.B. is supported
in part by a DFG fellowship within the Graduate School of Quantitative Biosciences
Munich (QBM) and by the Joachim Herz Stiftung.
article_processing_charge: No
article_type: original
author:
- first_name: Themistoklis
full_name: Zisis, Themistoklis
last_name: Zisis
- first_name: David
full_name: Brückner, David
id: e1e86031-6537-11eb-953a-f7ab92be508d
last_name: Brückner
orcid: 0000-0001-7205-2975
- first_name: Tom
full_name: Brandstätter, Tom
last_name: Brandstätter
- first_name: Wei Xiong
full_name: Siow, Wei Xiong
last_name: Siow
- first_name: Joseph
full_name: d’Alessandro, Joseph
last_name: d’Alessandro
- first_name: Angelika M.
full_name: Vollmar, Angelika M.
last_name: Vollmar
- first_name: Chase P.
full_name: Broedersz, Chase P.
last_name: Broedersz
- first_name: Stefan
full_name: Zahler, Stefan
last_name: Zahler
citation:
ama: Zisis T, Brückner D, Brandstätter T, et al. Disentangling cadherin-mediated
cell-cell interactions in collective cancer cell migration. Biophysical Journal.
2022;121(1):P44-60. doi:10.1016/j.bpj.2021.12.006
apa: Zisis, T., Brückner, D., Brandstätter, T., Siow, W. X., d’Alessandro, J., Vollmar,
A. M., … Zahler, S. (2022). Disentangling cadherin-mediated cell-cell interactions
in collective cancer cell migration. Biophysical Journal. Elsevier. https://doi.org/10.1016/j.bpj.2021.12.006
chicago: Zisis, Themistoklis, David Brückner, Tom Brandstätter, Wei Xiong Siow,
Joseph d’Alessandro, Angelika M. Vollmar, Chase P. Broedersz, and Stefan Zahler.
“Disentangling Cadherin-Mediated Cell-Cell Interactions in Collective Cancer Cell
Migration.” Biophysical Journal. Elsevier, 2022. https://doi.org/10.1016/j.bpj.2021.12.006.
ieee: T. Zisis et al., “Disentangling cadherin-mediated cell-cell interactions
in collective cancer cell migration,” Biophysical Journal, vol. 121, no.
1. Elsevier, pp. P44-60, 2022.
ista: Zisis T, Brückner D, Brandstätter T, Siow WX, d’Alessandro J, Vollmar AM,
Broedersz CP, Zahler S. 2022. Disentangling cadherin-mediated cell-cell interactions
in collective cancer cell migration. Biophysical Journal. 121(1), P44-60.
mla: Zisis, Themistoklis, et al. “Disentangling Cadherin-Mediated Cell-Cell Interactions
in Collective Cancer Cell Migration.” Biophysical Journal, vol. 121, no.
1, Elsevier, 2022, pp. P44-60, doi:10.1016/j.bpj.2021.12.006.
short: T. Zisis, D. Brückner, T. Brandstätter, W.X. Siow, J. d’Alessandro, A.M.
Vollmar, C.P. Broedersz, S. Zahler, Biophysical Journal 121 (2022) P44-60.
date_created: 2021-12-10T09:48:19Z
date_published: 2022-01-04T00:00:00Z
date_updated: 2025-06-11T13:59:29Z
day: '04'
ddc:
- '570'
department:
- _id: EdHa
- _id: GaTk
doi: 10.1016/j.bpj.2021.12.006
external_id:
isi:
- '000740815400007'
pmid:
- '34890578'
file:
- access_level: open_access
checksum: 1aa7c3478e0c8256b973b632efd1f6b4
content_type: application/pdf
creator: dernst
date_created: 2022-07-29T10:17:10Z
date_updated: 2022-07-29T10:17:10Z
file_id: '11697'
file_name: 2022_BiophysicalJour_Zisis.pdf
file_size: 4475504
relation: main_file
success: 1
file_date_updated: 2022-07-29T10:17:10Z
fulldoi: https://doi.org/10.1016/j.bpj.2021.12.006
has_accepted_license: '1'
intvolume: ' 121'
isi: 1
issue: '1'
keyword:
- Biophysics
language:
- iso: eng
month: '01'
oa: 1
oa_version: Published Version
page: P44-60
pmid: 1
project:
- _id: 9B861AAC-BA93-11EA-9121-9846C619BF3A
name: NOMIS Fellowship Program
publication: Biophysical Journal
publication_identifier:
issn:
- 0006-3495
publication_status: published
publisher: Elsevier
quality_controlled: '1'
scopus_import: '1'
status: public
title: Disentangling cadherin-mediated cell-cell interactions in collective cancer
cell migration
tmp:
image: /images/cc_by_nc_nd.png
legal_code_url: https://creativecommons.org/licenses/by-nc-nd/4.0/legalcode
name: Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 International
(CC BY-NC-ND 4.0)
short: CC BY-NC-ND (4.0)
type: journal_article
user_id: 2DF688A6-F248-11E8-B48F-1D18A9856A87
volume: 121
year: '2022'
...
---
_id: '10537'
abstract:
- lang: eng
text: We consider the quantum many-body evolution of a homogeneous Fermi gas in
three dimensions in the coupled semiclassical and mean-field scaling regime. We
study a class of initial data describing collective particle–hole pair excitations
on the Fermi ball. Using a rigorous version of approximate bosonization, we prove
that the many-body evolution can be approximated in Fock space norm by a quasi-free
bosonic evolution of the collective particle–hole excitations.
acknowledgement: NB was supported by Gruppo Nazionale per la Fisica Matematica (GNFM).
RS was supported by the European Research Council (ERC) under the European Union’s
Horizon 2020 research and innovation program (Grant Agreement No. 694227). PTN was
supported by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation)
under Germany’s Excellence Strategy (EXC-2111-390814868). MP was supported by the
European Research Council (ERC) under the European Union’s Horizon 2020 research
and innovation program (ERC StG MaMBoQ, Grant Agreement No. 802901). BS was supported
by the NCCR SwissMAP, the Swiss National Science Foundation through the Grant “Dynamical
and energetic properties of Bose-Einstein condensates,” and the European Research
Council (ERC) under the European Union’s Horizon 2020 research and innovation program
through the ERC-AdG CLaQS (Grant Agreement No. 834782).
article_processing_charge: No
article_type: original
arxiv: 1
author:
- first_name: Niels P
full_name: Benedikter, Niels P
id: 3DE6C32A-F248-11E8-B48F-1D18A9856A87
last_name: Benedikter
orcid: 0000-0002-1071-6091
- first_name: Phan Thành
full_name: Nam, Phan Thành
last_name: Nam
- first_name: Marcello
full_name: Porta, Marcello
last_name: Porta
- first_name: Benjamin
full_name: Schlein, Benjamin
last_name: Schlein
- first_name: Robert
full_name: Seiringer, Robert
id: 4AFD0470-F248-11E8-B48F-1D18A9856A87
last_name: Seiringer
orcid: 0000-0002-6781-0521
citation:
ama: Benedikter NP, Nam PT, Porta M, Schlein B, Seiringer R. Bosonization of fermionic
many-body dynamics. Annales Henri Poincaré. 2022;23(5):1725-1764. doi:10.1007/s00023-021-01136-y
apa: Benedikter, N. P., Nam, P. T., Porta, M., Schlein, B., & Seiringer, R.
(2022). Bosonization of fermionic many-body dynamics. Annales Henri Poincaré.
Springer Nature. https://doi.org/10.1007/s00023-021-01136-y
chicago: Benedikter, Niels P, Phan Thành Nam, Marcello Porta, Benjamin Schlein,
and Robert Seiringer. “Bosonization of Fermionic Many-Body Dynamics.” Annales
Henri Poincaré. Springer Nature, 2022. https://doi.org/10.1007/s00023-021-01136-y.
ieee: N. P. Benedikter, P. T. Nam, M. Porta, B. Schlein, and R. Seiringer, “Bosonization
of fermionic many-body dynamics,” Annales Henri Poincaré, vol. 23, no.
5. Springer Nature, pp. 1725–1764, 2022.
ista: Benedikter NP, Nam PT, Porta M, Schlein B, Seiringer R. 2022. Bosonization
of fermionic many-body dynamics. Annales Henri Poincaré. 23(5), 1725–1764.
mla: Benedikter, Niels P., et al. “Bosonization of Fermionic Many-Body Dynamics.”
Annales Henri Poincaré, vol. 23, no. 5, Springer Nature, 2022, pp. 1725–64,
doi:10.1007/s00023-021-01136-y.
short: N.P. Benedikter, P.T. Nam, M. Porta, B. Schlein, R. Seiringer, Annales Henri
Poincaré 23 (2022) 1725–1764.
date_created: 2021-12-12T23:01:28Z
date_published: 2022-05-01T00:00:00Z
date_updated: 2025-04-14T07:26:53Z
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doi: 10.1007/s00023-021-01136-y
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title: Bosonization of fermionic many-body dynamics
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