Cryo-EM software packages: A sys-admins point of view
S. Elefante, S. Stadlbauer, M.F. Alexander, A. Schlögl, in:, ASHP - Austrian-Slovenian HPC Meeting 2023, EuroCC, n.d., pp. 42–42.
LibreCat: https://research-explorer.ista.ac.at/record/13162

Running Windows-applications on a Linux HPC cluster using WINE
A. Schlögl, S. Elefante, V.-V. Hodirnau, in:, ASHP - Austrian-Slovenian HPC Meeting 2023, EuroCC, n.d., pp. 59–59.
LibreCat: https://research-explorer.ista.ac.at/record/13161

A hydraulic feedback loop between mesendoderm cell migration and interstitial fluid relocalization promotes embryonic axis formation in zebrafish
K. Huljev, S. Shamipour, D.C. Nunes Pinheiro, F. Preusser, I. Steccari, C.M. Sommer, S. Naik, C.-P.J. Heisenberg, Developmental Cell 58 (2023) 582–596.e7.
LibreCat: https://research-explorer.ista.ac.at/record/12830
DOI: 10.1016/j.devcel.2023.02.016
WoS: 000982111800001

Novel stereological method for estimation of cell counts in 3D collagen scaffolds
A. Zavadakova, L. Vistejnova, T. Belinova, F. Tichanek, D. Bilikova, P.R. Mouton, Scientific Reports 13 (2023).
LibreCat: https://research-explorer.ista.ac.at/record/13033
DOI: 10.1038/s41598-023-35162-z
WoS: 000995271600104

scChIX-seq infers dynamic relationships between histone modifications in single cells
J. Yeung, M. Florescu, P. Zeller, B.A. De Barbanson, M.D. Wellenstein, A. Van Oudenaarden, Nature Biotechnology 41 (2023) 813–823.
LibreCat: https://research-explorer.ista.ac.at/record/12106
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WoS: 000909067600003

Pathogen evasion of social immunity
M. Stock, B. Milutinovic, M. Hönigsberger, A.V. Grasse, F. Wiesenhofer, N. Kampleitner, M. Narasimhan, T. Schmitt, S. Cremer, Nature Ecology and Evolution 7 (2023) 450–460.
LibreCat: https://research-explorer.ista.ac.at/record/12543
DOI: 10.1038/s41559-023-01981-6
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PMID: 36732670

Pollution impact on metal and biomarker responses in intestinal cytosol of freshwater fish
V. Filipovi Mariji, N. Krasnici, D. Vali, D. Kapetanovi, I. Vardi Smrzli, M. Jordanova, K. Rebok, S. Ramani, V. Kostov, R. Nastova, Z. Dragun, Environmental Science and Pollution Research 30 (2023) 63510–63521.
LibreCat: https://research-explorer.ista.ac.at/record/12863
DOI: 10.1007/s11356-023-26844-2
WoS: 000970917900012
PMID: 37055686

Widening the use of 3D printing
D. Balazs, M. Ibáñez, Science 381 (2023) 1413–1414.
LibreCat: https://research-explorer.ista.ac.at/record/14404
DOI: 10.1126/science.adk3070
PMID: 37769110

En-Face Imaging of T Cell-Dendritic Cell Immunological Synapses
A.F. Leithner, J. Merrin, M.K. Sixt, in:, C. Baldari, M. Dustin (Eds.), The Immune Synapse, Springer Nature, New York, NY, 2023, pp. 137–147.
LibreCat: https://research-explorer.ista.ac.at/record/13052
DOI: 10.1007/978-1-0716-3135-5_9
PMID: 37106180

Arp isoforms regulate Ar/3 complex–dependent protrusion through differential Ena/VASP positioning
F. Fäßler, M. Javoor, J. Datler, H. Döring, F. Hofer, G.A. Dimchev, V.-V. Hodirnau, J. Faix, K. Rottner, F.K. Schur, Science Advances 9 (2023).
LibreCat: https://research-explorer.ista.ac.at/record/12334
DOI: 10.1126/sciadv.add6495
WoS: 000964550100015

Adaptive pathfinding by nucleokinesis during amoeboid migration
J. Kroll, R. Hauschild, A. Kuznetcov, K. Stefanowski, M.D. Hermann, J. Merrin, L.B. Shafeek, A. Müller-Taubenberger, J. Renkawitz, EMBO Journal (2023).
LibreCat: https://research-explorer.ista.ac.at/record/13342
DOI: 10.15252/embj.2023114557
PMID: 37987147

PCY-regulated lipid biosynthesis is critical to muscle health and ageing
D. Cikes, K. Elsayad, E. Sezgin, E. Koitai, T. Ferenc, M. Orthofer, R. Yarwood, L.X. Heinz, V. Sedlyarov, N. Darwish-Miranda, A. Taylor, S. Grapentine, F. al-Murshedi, A. Abot, A. Weidinger, C. Kutchukian, C. Sanchez, S.J.F. Cronin, M. Novatchkova, A. Kavirayani, T. Schuetz, B. Haubner, L. Haas, A. Hagelkruys, S. Jackowski, A. Kozlov, V. Jacquemond, C. Knauf, G. Superti-Furga, E. Rullman, T. Gustafsson, J. McDermot, M. Lowe, Z. Radak, J.S. Chamberlain, M. Bakovic, S. Banka, J.M. Penninger, Nature Metabolism 5 (2023) 495–515.
LibreCat: https://research-explorer.ista.ac.at/record/12747
DOI: 10.1038/s42255-023-00766-2
WoS: 000992064000002
PMID: 36941451

3D cell segregation geometry and dynamics are governed by tissue surface tension regulation
E. Méhes, E. Mones, M. Varga, Á. Zsigmond, B. Biri-Kovács, L. Nyitray, V. Barone, G. Krens, C.-P.J. Heisenberg, T. Vicsek, Communications Biology 6 (2023).
LibreCat: https://research-explorer.ista.ac.at/record/14041
DOI: 10.1038/s42003-023-05181-7
WoS: 001042544100001
PMID: 37542157

Synchronization in collectively moving inanimate and living active matter
M. Riedl, I.D. Mayer, J. Merrin, M.K. Sixt, B. Hof, Nature Communications 14 (2023).
LibreCat: https://research-explorer.ista.ac.at/record/14361
DOI: 10.1038/s41467-023-41432-1
WoS: 001087583700030
PMID: 37704595

Advancing microbiome research with machine learning: Key findings from the ML4Microbiome COST action
D. D’Elia, J. Truu, L. Lahti, M. Berland, G. Papoutsoglou, M. Ceci, A. Zomer, M.B. Lopes, E. Ibrahimi, A. Gruca, A. Nechyporenko, M. Frohme, T. Klammsteiner, E.C.D.S. Pau, L.J. Marcos-Zambrano, K. Hron, G. Pio, A. Simeon, R. Suharoschi, I. Moreno-Indias, A. Temko, M. Nedyalkova, E.S. Apostol, C.O. Truic, R. Shigdel, J.H. Telalovi, E. Bongcam-Rudloff, P. Przymus, N.B. Jordamovi, L. Falquet, S. Tarazona, A. Sampri, G. Isola, D. Pérez-Serrano, V. Trajkovik, L. Klucar, T. Loncar-Turukalo, A.S. Havulinna, C. Jansen, R.J. Bertelsen, M.J. Claesson, Frontiers in Microbiology 14 (2023).
LibreCat: https://research-explorer.ista.ac.at/record/14449
DOI: 10.3389/fmicb.2023.1257002
WoS: 001080536000001
PMID: 37808321

CC acts as both a sensor and a sink for CCL19 to coordinate collective leukocyte migration
J.H. Alanko, M.C. Ucar, N. Canigova, J.A. Stopp, J. Schwarz, J. Merrin, E.B. Hannezo, M.K. Sixt, Science Immunology 8 (2023).
LibreCat: https://research-explorer.ista.ac.at/record/14274
DOI: 10.1126/sciimmunol.adc9584
WoS: 001062110600003
PMID: 37656776

Dense 4D nanoscale reconstruction of living brain tissue
P. Velicky, E. Miguel Villalba, J.M. Michalska, J. Lyudchik, D. Wei, Z. Lin, J. Watson, J. Troidl, J. Beyer, Y. Ben Simon, C.M. Sommer, W. Jahr, A. Cenameri, J. Broichhagen, S.G.N. Grant, P.M. Jonas, G. Novarino, H. Pfister, B. Bickel, J.G. Danzl, Nature Methods 20 (2023) 1256–1265.
LibreCat: https://research-explorer.ista.ac.at/record/13267
DOI: 10.1038/s41592-023-01936-6
WoS: 001025621500001
PMID: 37429995

Spatial organization and function of RNA molecules within phase-separated condensates in zebrafish are controlled by Dn
K.J. Westerich, K. Tarbashevich, J. Schick, A. Gupta, M. Zhu, K. Hull, D. Romo, D. Zeuschner, M. Goudarzi, T. Gross-Thebing, E. Raz, Developmental Cell 58 (2023) 1578–1592.e5.
LibreCat: https://research-explorer.ista.ac.at/record/14781
DOI: 10.1016/j.devcel.2023.06.009
PMID: 37463577

First insight in element localisation in different body parts of the acanthocephalan Dentitruncus truttae using TEM and NanoSIMS
V. Filipovi Mariji, M.A. Subirana, D. Schaumlöffel, J. Barisi, E. Gontier, N. Krasnici, T. Mijosek, J.S. Hernández-Orts, T. Scholz, M. Erk, Science of The Total Environment 887 (2023).
LibreCat: https://research-explorer.ista.ac.at/record/14786
DOI: 10.1016/j.scitotenv.2023.164010
WoS: 001002645100001
PMID: 37169189

The human factor: Results of a small-angle scattering data analysis round robin
B.R. Pauw, G.J. Smales, A.S. Anker, V. Annadurai, D. Balazs, R. Bienert, W.G. Bouwman, I. Breßler, J. Breternitz, E.S. Brok, G. Bryant, A.J. Clulow, E.R. Crater, F. De Geuser, A.D. Giudice, J. Deumer, S. Disch, S. Dutt, K. Frank, E. Fratini, P.R.A.F. Garcia, E.P. Gilbert, M.B. Hahn, J. Hallett, M. Hohenschutz, M. Hollamby, S. Huband, J. Ilavsky, J.K. Jochum, M. Juelsholt, B.W. Mansel, P. Penttilä, R.K. Pittkowski, G. Portale, L.D. Pozzo, L. Rochels, J.M. Rosalie, P.E.J. Saloga, S. Seibt, A.J. Smith, G.N. Smith, G.A. Spiering, T.M. Stawski, O. Taché, A.F. Thünemann, K. Toth, A.E. Whitten, J. Wuttke, Journal of Applied Crystallography 56 (2023) 1618–1629.
LibreCat: https://research-explorer.ista.ac.at/record/14799
DOI: 10.1107/S1600576723008324
arXiv: 2303.03772