Christelle Fraisse
Vicoso Group
Barton Group
22 Publications
2024 | Published | Journal Article | IST-REx-ID: 18949 |

Toward the integration of speciation research
Stankowski S, Cutter AD, Satokangas I, Lerch BA, Rolland J, Smadja CM, Segami Marzal JC, Cooney CR, Feulner PGD, Domingos FMCB, North HL, Yamaguchi R, Butlin RK, Wolf JBW, Coughlan J, Heidbreder P, Hernández-Gutiérrez R, Barnard-Kubow KB, Peede D, Rancilhac L, Salvador RB, Thompson KA, Stacy EA, Moyle LC, Garlovsky MD, Maulana A, Kantelinen A, Cacho NI, Schneemann H, Domínguez M, Dopman EB, Lohse K, Rometsch SJ, Comeault AA, Merrill RM, Scordato ESC, Singhal S, Pärssinen V, Lackey ACR, Kumar S, Meier JI, Barton NH, Fraisse C, Ravinet M, Kulmuni J. 2024. Toward the integration of speciation research. Evolutionary Journal of the Linnean Society. 3(1), kzae001.
[Published Version]
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| DOI
Stankowski S, Cutter AD, Satokangas I, Lerch BA, Rolland J, Smadja CM, Segami Marzal JC, Cooney CR, Feulner PGD, Domingos FMCB, North HL, Yamaguchi R, Butlin RK, Wolf JBW, Coughlan J, Heidbreder P, Hernández-Gutiérrez R, Barnard-Kubow KB, Peede D, Rancilhac L, Salvador RB, Thompson KA, Stacy EA, Moyle LC, Garlovsky MD, Maulana A, Kantelinen A, Cacho NI, Schneemann H, Domínguez M, Dopman EB, Lohse K, Rometsch SJ, Comeault AA, Merrill RM, Scordato ESC, Singhal S, Pärssinen V, Lackey ACR, Kumar S, Meier JI, Barton NH, Fraisse C, Ravinet M, Kulmuni J. 2024. Toward the integration of speciation research. Evolutionary Journal of the Linnean Society. 3(1), kzae001.
2023 | Published | Journal Article | IST-REx-ID: 11479 |

Ten years of demographic modelling of divergence and speciation in the sea
A. De Jode, A. Le Moan, K. Johannesson, R. Faria, S. Stankowski, A.M. Westram, R.K. Butlin, M. Rafajlović, C. Fraisse, Evolutionary Applications 16 (2023) 542–559.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
A. De Jode, A. Le Moan, K. Johannesson, R. Faria, S. Stankowski, A.M. Westram, R.K. Butlin, M. Rafajlović, C. Fraisse, Evolutionary Applications 16 (2023) 542–559.
2022 | Published | Journal Article | IST-REx-ID: 12248 |

ZW sex-chromosome evolution and contagious parthenogenesis in Artemia brine shrimp
M.N. Elkrewi, U. Khauratovich, M.A. Toups, V.K. Bett, A. Mrnjavac, A. Macon, C. Fraisse, L. Sax, A.K. Huylmans, F. Hontoria, B. Vicoso, Genetics 222 (2022).
[Published Version]
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| Files available
| DOI
| WoS
| PubMed | Europe PMC
M.N. Elkrewi, U. Khauratovich, M.A. Toups, V.K. Bett, A. Mrnjavac, A. Macon, C. Fraisse, L. Sax, A.K. Huylmans, F. Hontoria, B. Vicoso, Genetics 222 (2022).
2021 | Published | Journal Article | IST-REx-ID: 8708 |

How do species barriers decay? Concordance and local introgression in mosaic hybrid zones of mussels
Simon, Alexis, How do species barriers decay? Concordance and local introgression in mosaic hybrid zones of mussels. Journal of Evolutionary Biology 34 (1). 2021
[Preprint]
View
| Files available
| DOI
| Download Preprint (ext.)
| WoS
| PubMed | Europe PMC
Simon, Alexis, How do species barriers decay? Concordance and local introgression in mosaic hybrid zones of mussels. Journal of Evolutionary Biology 34 (1). 2021
2021 | Published | Journal Article | IST-REx-ID: 9119 |

DILS: Demographic inferences with linked selection by using ABC
Fraisse, Christelle, DILS: Demographic inferences with linked selection by using ABC. Molecular Ecology Resources 21. 2021
[Preprint]
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| DOI
| Download Preprint (ext.)
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Fraisse, Christelle, DILS: Demographic inferences with linked selection by using ABC. Molecular Ecology Resources 21. 2021
2021 | Published | Journal Article | IST-REx-ID: 9168 |

The rates of introgression and barriers to genetic exchange between hybridizing species: Sex chromosomes vs autosomes
C. Fraisse, H. Sachdeva, Genetics 217 (2021).
[Published Version]
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| DOI
| Download Published Version (ext.)
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C. Fraisse, H. Sachdeva, Genetics 217 (2021).
2021 | Published | Journal Article | IST-REx-ID: 8928 |

Genomic inference of complex domestication histories in three Solanaceae species
Arnoux, Stéphanie, Genomic inference of complex domestication histories in three Solanaceae species. Journal of Evolutionary Biology 34 (2). 2021
[Published Version]
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| DOI
| Download Published Version (ext.)
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Arnoux, Stéphanie, Genomic inference of complex domestication histories in three Solanaceae species. Journal of Evolutionary Biology 34 (2). 2021
2020 | Research Data Reference | IST-REx-ID: 13073 |

How do species barriers decay? concordance and local introgression in mosaic hybrid zones of mussels
A. Simon, C. Fraisse, T. El Ayari, C. Liautard-Haag, P. Strelkov, J. Welch, N. Bierne, (2020).
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
A. Simon, C. Fraisse, T. El Ayari, C. Liautard-Haag, P. Strelkov, J. Welch, N. Bierne, (2020).
2020 | Research Data Reference | IST-REx-ID: 9798 |

Simulation code for Fig S2 from the distribution of epistasis on simple fitness landscapes
C. Fraisse, J.J. Welch, (2020).
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
C. Fraisse, J.J. Welch, (2020).
2020 | Research Data Reference | IST-REx-ID: 9799 |

Simulation code for Fig S1 from the distribution of epistasis on simple fitness landscapes
C. Fraisse, J.J. Welch, (2020).
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
C. Fraisse, J.J. Welch, (2020).
2020 | Research Data Reference | IST-REx-ID: 13065 |

VCF files of synonymous SNPs related to: Genomic inference of complex domestication histories in three Solanaceae species
S. Arnoux, C. Fraisse, C. Sauvage, (2020).
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
S. Arnoux, C. Fraisse, C. Sauvage, (2020).
2019 | Published | Journal Article | IST-REx-ID: 6466 |

Breaking down barriers in morning glories
D. Field, C. Fraisse, Molecular Ecology 28 (2019) 1579–1581.
[Published Version]
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| Files available
| DOI
| WoS
D. Field, C. Fraisse, Molecular Ecology 28 (2019) 1579–1581.
2019 | Published | Journal Article | IST-REx-ID: 6467 |

The distribution of epistasis on simple fitness landscapes
Fraisse, Christelle, The distribution of epistasis on simple fitness landscapes. Biology Letters 15 (4). 2019
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
| WoS
| PubMed | Europe PMC
Fraisse, Christelle, The distribution of epistasis on simple fitness landscapes. Biology Letters 15 (4). 2019
2019 | Published | Journal Article | IST-REx-ID: 6089 |

Pleiotropy modulates the efficacy of selection in drosophila melanogaster
C. Fraisse, G. Puixeu Sala, B. Vicoso, Molecular Biology and Evolution 36 (2019) 500–515.
[Submitted Version]
View
| Files available
| DOI
| Download Submitted Version (ext.)
| WoS
| PubMed | Europe PMC
C. Fraisse, G. Puixeu Sala, B. Vicoso, Molecular Biology and Evolution 36 (2019) 500–515.
2019 | Published | Journal Article | IST-REx-ID: 6856 |

Mating system variation in hybrid zones: Facilitation, barriers and asymmetries to gene flow
M. Pickup, N.H. Barton, Y. Brandvain, C. Fraisse, S. Yakimowski, T. Dixit, C. Lexer, E. Cereghetti, D. Field, New Phytologist 224 (2019) 1035–1047.
[Published Version]
View
| Files available
| DOI
| PubMed | Europe PMC
M. Pickup, N.H. Barton, Y. Brandvain, C. Fraisse, S. Yakimowski, T. Dixit, C. Lexer, E. Cereghetti, D. Field, New Phytologist 224 (2019) 1035–1047.
2018 | Published | Journal Article | IST-REx-ID: 139 |

The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: The effects of sequencing techniques and sampling strategies
C. Fraisse, C. Roux, P. Gagnaire, J. Romiguier, N. Faivre, J. Welch, N. Bierne, PeerJ 2018 (2018).
[Published Version]
View
| Files available
| DOI
| WoS
C. Fraisse, C. Roux, P. Gagnaire, J. Romiguier, N. Faivre, J. Welch, N. Bierne, PeerJ 2018 (2018).
2018 | Research Data | IST-REx-ID: 5757 |

Supplementary Files for "Pleiotropy modulates the efficacy of selection in Drosophila melanogaster"
C. Fraisse, (2018).
[Published Version]
View
| Files available
| DOI
C. Fraisse, (2018).
2017 | Published | Journal Article | IST-REx-ID: 614 |

The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W
Fraisse, Christelle, The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W. Nature Communications 8 (1). 2017
[Published Version]
View
| Files available
| DOI
| PubMed | Europe PMC
Fraisse, Christelle, The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W. Nature Communications 8 (1). 2017
2017 | Research Data | IST-REx-ID: 7163 |

Supplementary Files for "The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W"
C. Fraisse, (2017).
[Published Version]
View
| Files available
| DOI
C. Fraisse, (2017).
2016 | Published | Journal Article | IST-REx-ID: 1158 |

Shedding light on the grey zone of speciation along a continuum of genomic divergence
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
[Published Version]
View
| Files available
| DOI
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
2016 | Research Data Reference | IST-REx-ID: 9862
Simulation study to test the robustness of ABC in face of recent times of divergence
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).
[Published Version]
View
| Files available
| DOI
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).
2016 | Research Data Reference | IST-REx-ID: 9863
Accessions of surveyed individuals, geographic locations and summary statistics
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).
[Published Version]
View
| Files available
| DOI
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).
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22 Publications
2024 | Published | Journal Article | IST-REx-ID: 18949 |

Toward the integration of speciation research
Stankowski S, Cutter AD, Satokangas I, Lerch BA, Rolland J, Smadja CM, Segami Marzal JC, Cooney CR, Feulner PGD, Domingos FMCB, North HL, Yamaguchi R, Butlin RK, Wolf JBW, Coughlan J, Heidbreder P, Hernández-Gutiérrez R, Barnard-Kubow KB, Peede D, Rancilhac L, Salvador RB, Thompson KA, Stacy EA, Moyle LC, Garlovsky MD, Maulana A, Kantelinen A, Cacho NI, Schneemann H, Domínguez M, Dopman EB, Lohse K, Rometsch SJ, Comeault AA, Merrill RM, Scordato ESC, Singhal S, Pärssinen V, Lackey ACR, Kumar S, Meier JI, Barton NH, Fraisse C, Ravinet M, Kulmuni J. 2024. Toward the integration of speciation research. Evolutionary Journal of the Linnean Society. 3(1), kzae001.
[Published Version]
View
| Files available
| DOI
Stankowski S, Cutter AD, Satokangas I, Lerch BA, Rolland J, Smadja CM, Segami Marzal JC, Cooney CR, Feulner PGD, Domingos FMCB, North HL, Yamaguchi R, Butlin RK, Wolf JBW, Coughlan J, Heidbreder P, Hernández-Gutiérrez R, Barnard-Kubow KB, Peede D, Rancilhac L, Salvador RB, Thompson KA, Stacy EA, Moyle LC, Garlovsky MD, Maulana A, Kantelinen A, Cacho NI, Schneemann H, Domínguez M, Dopman EB, Lohse K, Rometsch SJ, Comeault AA, Merrill RM, Scordato ESC, Singhal S, Pärssinen V, Lackey ACR, Kumar S, Meier JI, Barton NH, Fraisse C, Ravinet M, Kulmuni J. 2024. Toward the integration of speciation research. Evolutionary Journal of the Linnean Society. 3(1), kzae001.
2023 | Published | Journal Article | IST-REx-ID: 11479 |

Ten years of demographic modelling of divergence and speciation in the sea
A. De Jode, A. Le Moan, K. Johannesson, R. Faria, S. Stankowski, A.M. Westram, R.K. Butlin, M. Rafajlović, C. Fraisse, Evolutionary Applications 16 (2023) 542–559.
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
A. De Jode, A. Le Moan, K. Johannesson, R. Faria, S. Stankowski, A.M. Westram, R.K. Butlin, M. Rafajlović, C. Fraisse, Evolutionary Applications 16 (2023) 542–559.
2022 | Published | Journal Article | IST-REx-ID: 12248 |

ZW sex-chromosome evolution and contagious parthenogenesis in Artemia brine shrimp
M.N. Elkrewi, U. Khauratovich, M.A. Toups, V.K. Bett, A. Mrnjavac, A. Macon, C. Fraisse, L. Sax, A.K. Huylmans, F. Hontoria, B. Vicoso, Genetics 222 (2022).
[Published Version]
View
| Files available
| DOI
| WoS
| PubMed | Europe PMC
M.N. Elkrewi, U. Khauratovich, M.A. Toups, V.K. Bett, A. Mrnjavac, A. Macon, C. Fraisse, L. Sax, A.K. Huylmans, F. Hontoria, B. Vicoso, Genetics 222 (2022).
2021 | Published | Journal Article | IST-REx-ID: 8708 |

How do species barriers decay? Concordance and local introgression in mosaic hybrid zones of mussels
Simon, Alexis, How do species barriers decay? Concordance and local introgression in mosaic hybrid zones of mussels. Journal of Evolutionary Biology 34 (1). 2021
[Preprint]
View
| Files available
| DOI
| Download Preprint (ext.)
| WoS
| PubMed | Europe PMC
Simon, Alexis, How do species barriers decay? Concordance and local introgression in mosaic hybrid zones of mussels. Journal of Evolutionary Biology 34 (1). 2021
2021 | Published | Journal Article | IST-REx-ID: 9119 |

DILS: Demographic inferences with linked selection by using ABC
Fraisse, Christelle, DILS: Demographic inferences with linked selection by using ABC. Molecular Ecology Resources 21. 2021
[Preprint]
View
| DOI
| Download Preprint (ext.)
| WoS
Fraisse, Christelle, DILS: Demographic inferences with linked selection by using ABC. Molecular Ecology Resources 21. 2021
2021 | Published | Journal Article | IST-REx-ID: 9168 |

The rates of introgression and barriers to genetic exchange between hybridizing species: Sex chromosomes vs autosomes
C. Fraisse, H. Sachdeva, Genetics 217 (2021).
[Published Version]
View
| DOI
| Download Published Version (ext.)
| WoS
C. Fraisse, H. Sachdeva, Genetics 217 (2021).
2021 | Published | Journal Article | IST-REx-ID: 8928 |

Genomic inference of complex domestication histories in three Solanaceae species
Arnoux, Stéphanie, Genomic inference of complex domestication histories in three Solanaceae species. Journal of Evolutionary Biology 34 (2). 2021
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
| WoS
| PubMed | Europe PMC
Arnoux, Stéphanie, Genomic inference of complex domestication histories in three Solanaceae species. Journal of Evolutionary Biology 34 (2). 2021
2020 | Research Data Reference | IST-REx-ID: 13073 |

How do species barriers decay? concordance and local introgression in mosaic hybrid zones of mussels
A. Simon, C. Fraisse, T. El Ayari, C. Liautard-Haag, P. Strelkov, J. Welch, N. Bierne, (2020).
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
A. Simon, C. Fraisse, T. El Ayari, C. Liautard-Haag, P. Strelkov, J. Welch, N. Bierne, (2020).
2020 | Research Data Reference | IST-REx-ID: 9798 |

Simulation code for Fig S2 from the distribution of epistasis on simple fitness landscapes
C. Fraisse, J.J. Welch, (2020).
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
C. Fraisse, J.J. Welch, (2020).
2020 | Research Data Reference | IST-REx-ID: 9799 |

Simulation code for Fig S1 from the distribution of epistasis on simple fitness landscapes
C. Fraisse, J.J. Welch, (2020).
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
C. Fraisse, J.J. Welch, (2020).
2020 | Research Data Reference | IST-REx-ID: 13065 |

VCF files of synonymous SNPs related to: Genomic inference of complex domestication histories in three Solanaceae species
S. Arnoux, C. Fraisse, C. Sauvage, (2020).
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
S. Arnoux, C. Fraisse, C. Sauvage, (2020).
2019 | Published | Journal Article | IST-REx-ID: 6466 |

Breaking down barriers in morning glories
D. Field, C. Fraisse, Molecular Ecology 28 (2019) 1579–1581.
[Published Version]
View
| Files available
| DOI
| WoS
D. Field, C. Fraisse, Molecular Ecology 28 (2019) 1579–1581.
2019 | Published | Journal Article | IST-REx-ID: 6467 |

The distribution of epistasis on simple fitness landscapes
Fraisse, Christelle, The distribution of epistasis on simple fitness landscapes. Biology Letters 15 (4). 2019
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
| WoS
| PubMed | Europe PMC
Fraisse, Christelle, The distribution of epistasis on simple fitness landscapes. Biology Letters 15 (4). 2019
2019 | Published | Journal Article | IST-REx-ID: 6089 |

Pleiotropy modulates the efficacy of selection in drosophila melanogaster
C. Fraisse, G. Puixeu Sala, B. Vicoso, Molecular Biology and Evolution 36 (2019) 500–515.
[Submitted Version]
View
| Files available
| DOI
| Download Submitted Version (ext.)
| WoS
| PubMed | Europe PMC
C. Fraisse, G. Puixeu Sala, B. Vicoso, Molecular Biology and Evolution 36 (2019) 500–515.
2019 | Published | Journal Article | IST-REx-ID: 6856 |

Mating system variation in hybrid zones: Facilitation, barriers and asymmetries to gene flow
M. Pickup, N.H. Barton, Y. Brandvain, C. Fraisse, S. Yakimowski, T. Dixit, C. Lexer, E. Cereghetti, D. Field, New Phytologist 224 (2019) 1035–1047.
[Published Version]
View
| Files available
| DOI
| PubMed | Europe PMC
M. Pickup, N.H. Barton, Y. Brandvain, C. Fraisse, S. Yakimowski, T. Dixit, C. Lexer, E. Cereghetti, D. Field, New Phytologist 224 (2019) 1035–1047.
2018 | Published | Journal Article | IST-REx-ID: 139 |

The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: The effects of sequencing techniques and sampling strategies
C. Fraisse, C. Roux, P. Gagnaire, J. Romiguier, N. Faivre, J. Welch, N. Bierne, PeerJ 2018 (2018).
[Published Version]
View
| Files available
| DOI
| WoS
C. Fraisse, C. Roux, P. Gagnaire, J. Romiguier, N. Faivre, J. Welch, N. Bierne, PeerJ 2018 (2018).
2018 | Research Data | IST-REx-ID: 5757 |

Supplementary Files for "Pleiotropy modulates the efficacy of selection in Drosophila melanogaster"
C. Fraisse, (2018).
[Published Version]
View
| Files available
| DOI
C. Fraisse, (2018).
2017 | Published | Journal Article | IST-REx-ID: 614 |

The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W
Fraisse, Christelle, The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W. Nature Communications 8 (1). 2017
[Published Version]
View
| Files available
| DOI
| PubMed | Europe PMC
Fraisse, Christelle, The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W. Nature Communications 8 (1). 2017
2017 | Research Data | IST-REx-ID: 7163 |

Supplementary Files for "The deep conservation of the Lepidoptera Z chromosome suggests a non canonical origin of the W"
C. Fraisse, (2017).
[Published Version]
View
| Files available
| DOI
C. Fraisse, (2017).
2016 | Published | Journal Article | IST-REx-ID: 1158 |

Shedding light on the grey zone of speciation along a continuum of genomic divergence
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
[Published Version]
View
| Files available
| DOI
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, PLoS Biology 14 (2016).
2016 | Research Data Reference | IST-REx-ID: 9862
Simulation study to test the robustness of ABC in face of recent times of divergence
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).
[Published Version]
View
| Files available
| DOI
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).
2016 | Research Data Reference | IST-REx-ID: 9863
Accessions of surveyed individuals, geographic locations and summary statistics
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).
[Published Version]
View
| Files available
| DOI
C. Roux, C. Fraisse, J. Romiguier, Y. Anciaux, N. Galtier, N. Bierne, (2016).