Nick N Machnik
Graduate School
Robinson Group
5 Publications
2024 | Published | Preprint | IST-REx-ID: 18648 | 
Machnik NN, Mahmoudi SM, Borczyk M, Krätschmer I, Bauer MJ, Robinson MR. Causal inference for multiple risk factors and diseases from genomics data. bioRxiv. 2024. doi:10.1101/2023.12.06.570392
[Preprint]
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2024 | Published | Thesis | IST-REx-ID: 18642
Machnik NN. Algorithms for causal learning and comparative analysis for genomic data. 2024. doi:10.15479/at:ista:18642
[Published Version]
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2023 | Published | Journal Article | IST-REx-ID: 14689
Ing-Simmons E, Machnik NN, Vaquerizas JM. Reply to: Revisiting the use of structural similarity index in Hi-C. Nature Genetics. 2023;55(12):2053-2055. doi:10.1038/s41588-023-01595-5
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2020 | Published | Report | IST-REx-ID: 8151
Maslov M, Kondrashov F, Artner C, et al. Core Project Proceedings. IST Austria; 2020.
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2020 | Published | Journal Article | IST-REx-ID: 8707 |
Galan S, Machnik NN, Kruse K, Díaz N, Marti-Renom MA, Vaquerizas JM. CHESS enables quantitative comparison of chromatin contact data and automatic feature extraction. Nature Genetics. 2020;52:1247-1255. doi:10.1038/s41588-020-00712-y
[Submitted Version]
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Grants
5 Publications
2024 | Published | Preprint | IST-REx-ID: 18648 |
Machnik NN, Mahmoudi SM, Borczyk M, Krätschmer I, Bauer MJ, Robinson MR. Causal inference for multiple risk factors and diseases from genomics data. bioRxiv. 2024. doi:10.1101/2023.12.06.570392
[Preprint]
View
| Files available
| DOI
| Download Preprint (ext.)
2024 | Published | Thesis | IST-REx-ID: 18642
Machnik NN. Algorithms for causal learning and comparative analysis for genomic data. 2024. doi:10.15479/at:ista:18642
[Published Version]
View
| Files available
| DOI
2023 | Published | Journal Article | IST-REx-ID: 14689
Ing-Simmons E, Machnik NN, Vaquerizas JM. Reply to: Revisiting the use of structural similarity index in Hi-C. Nature Genetics. 2023;55(12):2053-2055. doi:10.1038/s41588-023-01595-5
View
| DOI
| PubMed | Europe PMC
2020 | Published | Report | IST-REx-ID: 8151
Maslov M, Kondrashov F, Artner C, et al. Core Project Proceedings. IST Austria; 2020.
View
| Files available
2020 | Published | Journal Article | IST-REx-ID: 8707 |
Galan S, Machnik NN, Kruse K, Díaz N, Marti-Renom MA, Vaquerizas JM. CHESS enables quantitative comparison of chromatin contact data and automatic feature extraction. Nature Genetics. 2020;52:1247-1255. doi:10.1038/s41588-020-00712-y
[Submitted Version]
View
| Files available
| DOI
| Download Submitted Version (ext.)
| WoS
| PubMed | Europe PMC