--- res: bibo_abstract: - Aging is associated with the decline of protein, cell, and organ function. Here, we use an integrated approach to characterize gene expression, bulk translation, and cell biology in the brains and livers of young and old rats. We identify 468 differences in protein abundance between young and old animals. The majority are a consequence of altered translation output, that is, the combined effect of changes in transcript abundance and translation efficiency. In addition, we identify 130 proteins whose overall abundance remains unchanged but whose sub-cellular localization, phosphorylation state, or splice-form varies. While some protein-level differences appear to be a generic property of the rats’ chronological age, the majority are specific to one organ. These may be a consequence of the organ’s physiology or the chronological age of the cells within the tissue. Taken together, our study provides an initial view of the proteome at the molecular, sub-cellular, and organ level in young and old rats.@eng bibo_authorlist: - foaf_Person: foaf_givenName: Alessandro foaf_name: Ori, Alessandro foaf_surname: Ori - foaf_Person: foaf_givenName: Brandon H. foaf_name: Toyama, Brandon H. foaf_surname: Toyama - foaf_Person: foaf_givenName: Michael S. foaf_name: Harris, Michael S. foaf_surname: Harris - foaf_Person: foaf_givenName: Thomas foaf_name: Bock, Thomas foaf_surname: Bock - foaf_Person: foaf_givenName: Murat foaf_name: Iskar, Murat foaf_surname: Iskar - foaf_Person: foaf_givenName: Peer foaf_name: Bork, Peer foaf_surname: Bork - foaf_Person: foaf_givenName: Nicholas T. foaf_name: Ingolia, Nicholas T. foaf_surname: Ingolia - foaf_Person: foaf_givenName: Martin W foaf_name: HETZER, Martin W foaf_surname: HETZER foaf_workInfoHomepage: http://www.librecat.org/personId=86c0d31b-b4eb-11ec-ac5a-eae7b2e135ed orcid: 0000-0002-2111-992X - foaf_Person: foaf_givenName: Martin foaf_name: Beck, Martin foaf_surname: Beck bibo_doi: 10.1016/j.cels.2015.08.012 bibo_issue: '3' bibo_volume: 1 dct_date: 2015^xs_gYear dct_isPartOf: - http://id.crossref.org/issn/2405-4712 dct_language: eng dct_publisher: Elsevier@ dct_subject: - Cell Biology - Histology - Pathology and Forensic Medicine dct_title: Integrated transcriptome and proteome analyses reveal organ-specific proteome deterioration in old rats@ fabio_hasPubmedId: '27135913' ...