{"year":"2023","abstract":[{"lang":"eng","text":"Plants can regenerate their bodies via de novo establishment of shoot apical meristems (SAMs) from pluripotent callus. Only a small fraction of callus cells is eventually specified into SAMs but the molecular mechanisms underlying fate specification remain obscure. The expression of WUSCHEL (WUS) is an early hallmark of SAM fate acquisition. Here, we show that a WUS paralog, WUSCHEL-RELATED HOMEOBOX 13 (WOX13), negatively regulates SAM formation from callus in Arabidopsis thaliana. WOX13 promotes non-meristematic cell fate via transcriptional repression of WUS and other SAM regulators and activation of cell wall modifiers. Our Quartz-Seq2–based single cell transcriptome revealed that WOX13 plays key roles in determining cellular identity of callus cell population. We propose that reciprocal inhibition between WUS and WOX13 mediates critical cell fate determination in pluripotent cell population, which has a major impact on regeneration efficiency."}],"oa":1,"isi":1,"page":"eadg6983","language":[{"iso":"eng"}],"day":"07","author":[{"full_name":"Ogura, Nao","last_name":"Ogura","first_name":"Nao"},{"full_name":"Sasagawa, Yohei","last_name":"Sasagawa","first_name":"Yohei"},{"full_name":"Ito, Tasuku","id":"d5a17a4a-e534-11eb-93ec-91fa2aa9bd57","first_name":"Tasuku","last_name":"Ito","orcid":"0000-0002-2482-9089"},{"last_name":"Tameshige","first_name":"Toshiaki","full_name":"Tameshige, Toshiaki"},{"first_name":"Satomi","last_name":"Kawai","full_name":"Kawai, Satomi"},{"full_name":"Sano, Masaki","last_name":"Sano","first_name":"Masaki"},{"last_name":"Doll","first_name":"Yuki","full_name":"Doll, Yuki"},{"full_name":"Iwase, Akira","first_name":"Akira","last_name":"Iwase"},{"last_name":"Kawamura","first_name":"Ayako","full_name":"Kawamura, Ayako"},{"first_name":"Takamasa","last_name":"Suzuki","full_name":"Suzuki, Takamasa"},{"full_name":"Nikaido, Itoshi","last_name":"Nikaido","first_name":"Itoshi"},{"full_name":"Sugimoto, Keiko","last_name":"Sugimoto","first_name":"Keiko"},{"last_name":"Ikeuchi","first_name":"Momoko","full_name":"Ikeuchi, Momoko"}],"tmp":{"name":"Creative Commons Attribution 4.0 International Public License (CC-BY 4.0)","legal_code_url":"https://creativecommons.org/licenses/by/4.0/legalcode","short":"CC BY (4.0)","image":"/images/cc_by.png"},"has_accepted_license":"1","ddc":["580"],"publication_identifier":{"eissn":["2375-2548"]},"article_processing_charge":"Yes","title":"WUSCHEL-RELATED HOMEOBOX 13 suppresses de novo shoot regeneration via cell fate control of pluripotent callus","intvolume":"         9","citation":{"ista":"Ogura N, Sasagawa Y, Ito T, Tameshige T, Kawai S, Sano M, Doll Y, Iwase A, Kawamura A, Suzuki T, Nikaido I, Sugimoto K, Ikeuchi M. 2023. WUSCHEL-RELATED HOMEOBOX 13 suppresses de novo shoot regeneration via cell fate control of pluripotent callus. Science Advances. 9(27), eadg6983.","mla":"Ogura, Nao, et al. “WUSCHEL-RELATED HOMEOBOX 13 Suppresses de Novo Shoot Regeneration via Cell Fate Control of Pluripotent Callus.” <i>Science Advances</i>, vol. 9, no. 27, American Association for the Advancement of Science, 2023, p. eadg6983, doi:<a href=\"https://doi.org/10.1126/sciadv.adg6983\">10.1126/sciadv.adg6983</a>.","short":"N. Ogura, Y. Sasagawa, T. Ito, T. Tameshige, S. Kawai, M. Sano, Y. Doll, A. Iwase, A. Kawamura, T. Suzuki, I. Nikaido, K. Sugimoto, M. Ikeuchi, Science Advances 9 (2023) eadg6983.","chicago":"Ogura, Nao, Yohei Sasagawa, Tasuku Ito, Toshiaki Tameshige, Satomi Kawai, Masaki Sano, Yuki Doll, et al. “WUSCHEL-RELATED HOMEOBOX 13 Suppresses de Novo Shoot Regeneration via Cell Fate Control of Pluripotent Callus.” <i>Science Advances</i>. American Association for the Advancement of Science, 2023. <a href=\"https://doi.org/10.1126/sciadv.adg6983\">https://doi.org/10.1126/sciadv.adg6983</a>.","apa":"Ogura, N., Sasagawa, Y., Ito, T., Tameshige, T., Kawai, S., Sano, M., … Ikeuchi, M. (2023). WUSCHEL-RELATED HOMEOBOX 13 suppresses de novo shoot regeneration via cell fate control of pluripotent callus. <i>Science Advances</i>. American Association for the Advancement of Science. <a href=\"https://doi.org/10.1126/sciadv.adg6983\">https://doi.org/10.1126/sciadv.adg6983</a>","ama":"Ogura N, Sasagawa Y, Ito T, et al. WUSCHEL-RELATED HOMEOBOX 13 suppresses de novo shoot regeneration via cell fate control of pluripotent callus. <i>Science Advances</i>. 2023;9(27):eadg6983. doi:<a href=\"https://doi.org/10.1126/sciadv.adg6983\">10.1126/sciadv.adg6983</a>","ieee":"N. Ogura <i>et al.</i>, “WUSCHEL-RELATED HOMEOBOX 13 suppresses de novo shoot regeneration via cell fate control of pluripotent callus,” <i>Science Advances</i>, vol. 9, no. 27. American Association for the Advancement of Science, p. eadg6983, 2023."},"scopus_import":"1","pmid":1,"quality_controlled":"1","date_published":"2023-07-07T00:00:00Z","volume":9,"external_id":{"isi":["001030983100012"],"pmid":["37418524"]},"license":"https://creativecommons.org/licenses/by/4.0/","publisher":"American Association for the Advancement of Science","publication_status":"published","date_created":"2023-07-23T22:01:11Z","month":"07","issue":"27","publication":"Science Advances","user_id":"2DF688A6-F248-11E8-B48F-1D18A9856A87","type":"journal_article","date_updated":"2023-12-13T11:59:29Z","oa_version":"Published Version","doi":"10.1126/sciadv.adg6983","acknowledgement":"Wethank Y.Iwayama, K.Ohtawa, K.Fukumoto,andN. Mataga (RIKENRRD) for technical assistance in Quartz-Seq2analyses; M. Mouri(RIKENCSRS)for technical support with plasmid construction and transactivation assay; Y. Ikeda (NAIST) for technical support with tissue culture; and A. Furuta for technical support in bulk RNA-seq analysis. We also thank the Single-cell Omics Laboratory for technical consultation in scRNA-seq analyses, the members of the Laboratory for Bioinformatics Research at the RIKEN Center for Biosystems Dynamics Research, and A. Matsushima and T. Ichikawa for IT infrastructure management. This work was supported by JSPS KAKENHI(17K15146,19H05670,20K06712,20H04894,20H05431,and 22H04713 to M.I. and 20H03284 and 20H05911 to K.S.), by the JST FOREST Program (JPMJFR214H to M.I.), by The Naito Foundation to M.I.; by Takeda Science Foundation to M.I,and by the Shiseido Female Researcher Science Grant to M.I. This work was partially supported by RIKENE pigenome Control Program, Medical Research Center Initiative for High Depth Omics, and JST CREST(JPMJCR16G3and JPMJCR1926)to I.N.","file_date_updated":"2023-08-01T06:40:35Z","file":[{"content_type":"application/pdf","relation":"main_file","file_id":"13338","checksum":"f59217e1083767777318b5d0cc5e141d","file_name":"2023_ScienceAdvance_Ogura.pdf","date_created":"2023-08-01T06:40:35Z","access_level":"open_access","creator":"dernst","date_updated":"2023-08-01T06:40:35Z","success":1,"file_size":1759993}],"_id":"13259","article_type":"original","status":"public"}