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4131 Publications
2020 | Journal Article | IST-REx-ID: 7672 |

Surface and catalyst driven singlet oxygen formation in Li-O2 cells
A. Samojlov, D. Schuster, J. Kahr, S.A. Freunberger, Electrochimica Acta 362 (2020).
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A. Samojlov, D. Schuster, J. Kahr, S.A. Freunberger, Electrochimica Acta 362 (2020).
2020 | Journal Article | IST-REx-ID: 9160 |

All roads lead to auxin: Post-translational regulation of auxin transport by multiple hormonal pathways
H. Semeradova, J.C. Montesinos López, E. Benková, Plant Communications 1 (2020).
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| PubMed | Europe PMC
H. Semeradova, J.C. Montesinos López, E. Benková, Plant Communications 1 (2020).
2020 | Thesis | IST-REx-ID: 7525 |

Localization and functional role of Cav2.3 in the medial habenula to interpeduncular nucleus pathway
P. Bhandari, Localization and Functional Role of Cav2.3 in the Medial Habenula to Interpeduncular Nucleus Pathway, IST Austria, 2020.
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P. Bhandari, Localization and Functional Role of Cav2.3 in the Medial Habenula to Interpeduncular Nucleus Pathway, IST Austria, 2020.
2020 | Preprint | IST-REx-ID: 8831 |

Enhancement of proximity induced superconductivity in planar Germanium
K. Aggarwal, A.C. Hofmann, D. Jirovec, I. Prieto Gonzalez, A. Sammak, M. Botifoll, S. Marti-Sanchez, M. Veldhorst, J. Arbiol, G. Scappucci, G. Katsaros, ArXiv (n.d.).
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| arXiv
K. Aggarwal, A.C. Hofmann, D. Jirovec, I. Prieto Gonzalez, A. Sammak, M. Botifoll, S. Marti-Sanchez, M. Veldhorst, J. Arbiol, G. Scappucci, G. Katsaros, ArXiv (n.d.).
2020 | Thesis | IST-REx-ID: 8657 |

Perturbations of protein synthesis: from antibiotics to genetics and physiology
B. Kavcic, Perturbations of Protein Synthesis: From Antibiotics to Genetics and Physiology, IST Austria, 2020.
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B. Kavcic, Perturbations of Protein Synthesis: From Antibiotics to Genetics and Physiology, IST Austria, 2020.
2020 | Journal Article | IST-REx-ID: 8250 |

Mechanisms of drug interactions between translation-inhibiting antibiotics
B. Kavcic, G. Tkačik, M.T. Bollenbach, Nature Communications 11 (2020).
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B. Kavcic, G. Tkačik, M.T. Bollenbach, Nature Communications 11 (2020).
2020 | Preprint | IST-REx-ID: 7673 |

A minimal biophysical model of combined antibiotic action
B. Kavcic, G. Tkačik, M.T. Bollenbach, BioRxiv (2020).
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B. Kavcic, G. Tkačik, M.T. Bollenbach, BioRxiv (2020).
2020 | Journal Article | IST-REx-ID: 8569 |

Non-cell-autonomous mechanisms in radial projection neuron migration in the developing cerebral cortex
A.H. Hansen, S. Hippenmeyer, Frontiers in Cell and Developmental Biology 8 (2020).
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A.H. Hansen, S. Hippenmeyer, Frontiers in Cell and Developmental Biology 8 (2020).
2020 | Journal Article | IST-REx-ID: 8532 |

Deep learning-assisted high-throughput analysis of freeze-fracture replica images applied to glutamate receptors and calcium channels at hippocampal synapses
D. Kleindienst, J.-C. Montanaro-Punzengruber, P. Bhandari, M.J. Case, Y. Fukazawa, R. Shigemoto, International Journal of Molecular Sciences 21 (2020).
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D. Kleindienst, J.-C. Montanaro-Punzengruber, P. Bhandari, M.J. Case, Y. Fukazawa, R. Shigemoto, International Journal of Molecular Sciences 21 (2020).
2020 | Thesis | IST-REx-ID: 8350 |

Bulk actin dynamics drive phase segregation in zebrafish oocytes
S. Shamipour, Bulk Actin Dynamics Drive Phase Segregation in Zebrafish Oocytes , IST Austria, 2020.
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S. Shamipour, Bulk Actin Dynamics Drive Phase Segregation in Zebrafish Oocytes , IST Austria, 2020.
2020 | Thesis | IST-REx-ID: 7680 |

Synthetic tools for optogenetic and chemogenetic inhibition of cellular signals
S. Kainrath, Synthetic Tools for Optogenetic and Chemogenetic Inhibition of Cellular Signals, IST Austria, 2020.
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| DOI
S. Kainrath, Synthetic Tools for Optogenetic and Chemogenetic Inhibition of Cellular Signals, IST Austria, 2020.
2020 | Preprint | IST-REx-ID: 9750 |

Tension-dependent stabilization of E-cadherin limits cell-cell contact expansion
J. Slovakova, M.K. Sikora, S. Caballero Mancebo, G. Krens, W. Kaufmann, K. Huljev, C.-P.J. Heisenberg, BioRxiv (2020).
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J. Slovakova, M.K. Sikora, S. Caballero Mancebo, G. Krens, W. Kaufmann, K. Huljev, C.-P.J. Heisenberg, BioRxiv (2020).
2020 | Thesis | IST-REx-ID: 8620 |

Illuminating the role of Cul3 in autism spectrum disorder pathogenesis
J. Morandell, Illuminating the Role of Cul3 in Autism Spectrum Disorder Pathogenesis, IST Austria, 2020.
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J. Morandell, Illuminating the Role of Cul3 in Autism Spectrum Disorder Pathogenesis, IST Austria, 2020.
2020 | Thesis | IST-REx-ID: 8340 |

Molecular mechanisms of mitochondrial redox-coupled proton pumping enzymes
D. Kampjut, Molecular Mechanisms of Mitochondrial Redox-Coupled Proton Pumping Enzymes, IST Austria, 2020.
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D. Kampjut, Molecular Mechanisms of Mitochondrial Redox-Coupled Proton Pumping Enzymes, IST Austria, 2020.
2020 | Journal Article | IST-REx-ID: 8139 |

Experimental toolbox for quantitative evaluation of clathrin-mediated endocytosis in the plant model Arabidopsis
A.J. Johnson, N. Gnyliukh, W. Kaufmann, M. Narasimhan, G. Vert, S. Bednarek, J. Friml, Journal of Cell Science 133 (2020).
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A.J. Johnson, N. Gnyliukh, W. Kaufmann, M. Narasimhan, G. Vert, S. Bednarek, J. Friml, Journal of Cell Science 133 (2020).
2020 | Journal Article | IST-REx-ID: 7889 |

Plants with genetically encoded autoluminescence
Mitiouchkina T, Mishin AS, Gonzalez Somermeyer L, Markina NM, Chepurnyh TV, Guglya EB, Karataeva TA, Palkina KA, Shakhova ES, Fakhranurova LI, Chekova SV, Tsarkova AS, Golubev YV, Negrebetsky VV, Dolgushin SA, Shalaev PV, Shlykov D, Melnik OA, Shipunova VO, Deyev SM, Bubyrev AI, Pushin AS, Choob VV, Dolgov SV, Kondrashov F, Yampolsky IV, Sarkisyan KS. 2020. Plants with genetically encoded autoluminescence. Nature Biotechnology. 38, 944–946.
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Mitiouchkina T, Mishin AS, Gonzalez Somermeyer L, Markina NM, Chepurnyh TV, Guglya EB, Karataeva TA, Palkina KA, Shakhova ES, Fakhranurova LI, Chekova SV, Tsarkova AS, Golubev YV, Negrebetsky VV, Dolgushin SA, Shalaev PV, Shlykov D, Melnik OA, Shipunova VO, Deyev SM, Bubyrev AI, Pushin AS, Choob VV, Dolgov SV, Kondrashov F, Yampolsky IV, Sarkisyan KS. 2020. Plants with genetically encoded autoluminescence. Nature Biotechnology. 38, 944–946.
2020 | Preprint | IST-REx-ID: 7800 |

Cul3 regulates cytoskeleton protein homeostasis and cell migration during a critical window of brain development
J. Morandell, L.A. Schwarz, B. Basilico, S. Tasciyan, A. Nicolas, C.M. Sommer, C. Kreuzinger, L. Knaus, Z. Dobler, E. Cacci, J.G. Danzl, G. Novarino, BioRxiv (n.d.).
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| DOI
J. Morandell, L.A. Schwarz, B. Basilico, S. Tasciyan, A. Nicolas, C.M. Sommer, C. Kreuzinger, L. Knaus, Z. Dobler, E. Cacci, J.G. Danzl, G. Novarino, BioRxiv (n.d.).
2020 | Journal Article | IST-REx-ID: 8131 |

Molecular mechanisms for targeted ASD treatments
B. Basilico, J. Morandell, G. Novarino, Current Opinion in Genetics and Development 65 (2020) 126–137.
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B. Basilico, J. Morandell, G. Novarino, Current Opinion in Genetics and Development 65 (2020) 126–137.
2020 | Journal Article | IST-REx-ID: 7815 |

Lineage tracing and clonal analysis in developing cerebral cortex using mosaic analysis with double markers (MADM)
R.J. Beattie, C. Streicher, N. Amberg, G.T. Cheung, X. Contreras, A.H. Hansen, S. Hippenmeyer, Journal of Visual Experiments (JoVE) (2020).
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R.J. Beattie, C. Streicher, N. Amberg, G.T. Cheung, X. Contreras, A.H. Hansen, S. Hippenmeyer, Journal of Visual Experiments (JoVE) (2020).
2020 | Thesis | IST-REx-ID: 7902 |

Genetic dissection of neural development in health and disease at single cell resolution
X. Contreras, Genetic Dissection of Neural Development in Health and Disease at Single Cell Resolution, IST Austria, 2020.
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X. Contreras, Genetic Dissection of Neural Development in Health and Disease at Single Cell Resolution, IST Austria, 2020.
2020 | Journal Article | IST-REx-ID: 8002 |

Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots
L. Hörmayer, J.C. Montesinos López, P. Marhavá, E. Benková, S. Yoshida, J. Friml, Proceedings of the National Academy of Sciences 117 (2020).
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L. Hörmayer, J.C. Montesinos López, P. Marhavá, E. Benková, S. Yoshida, J. Friml, Proceedings of the National Academy of Sciences 117 (2020).
2020 | Thesis | IST-REx-ID: 7258 |

New approaches to reduce friction in turbulent pipe flow
D. Scarselli, New Approaches to Reduce Friction in Turbulent Pipe Flow, IST Austria, 2020.
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D. Scarselli, New Approaches to Reduce Friction in Turbulent Pipe Flow, IST Austria, 2020.
2020 | Thesis | IST-REx-ID: 8983 |

Metabolic regulation of Drosophila macrophage tissue invasion
S. Emtenani, Metabolic Regulation of Drosophila Macrophage Tissue Invasion, IST Austria, 2020.
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S. Emtenani, Metabolic Regulation of Drosophila Macrophage Tissue Invasion, IST Austria, 2020.
2020 | Preprint | IST-REx-ID: 8557 |

Cortical actin properties controlled by Drosophila Fos aid macrophage infiltration against surrounding tissue resistance
V. Belyaeva, S. Wachner, I. Gridchyn, M. Linder, S. Emtenani, A. György, M. Sibilia, D.E. Siekhaus, BioRxiv (n.d.).
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V. Belyaeva, S. Wachner, I. Gridchyn, M. Linder, S. Emtenani, A. György, M. Sibilia, D.E. Siekhaus, BioRxiv (n.d.).
2020 | Journal Article | IST-REx-ID: 8190 |

Zena Werb (1945-2020): Cell biology in context
M.K. Sixt, A. Huttenlocher, The Journal of Cell Biology 219 (2020).
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M.K. Sixt, A. Huttenlocher, The Journal of Cell Biology 219 (2020).
2020 | Journal Article | IST-REx-ID: 7161 |

Inertial projection-type methods for solving quasi-variational inequalities in real Hilbert spaces
Y. Shehu, A. Gibali, S. Sagratella, Journal of Optimization Theory and Applications 184 (2020) 877–894.
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Y. Shehu, A. Gibali, S. Sagratella, Journal of Optimization Theory and Applications 184 (2020) 877–894.
2020 | Journal Article | IST-REx-ID: 7427 |

Salicylic acid targets protein phosphatase 2A to attenuate growth in plants
S. Tan, M.F. Abas, I. Verstraeten, M. Glanc, G. Molnar, J. Hajny, P. Lasák, I. Petřík, E. Russinova, J. Petrášek, O. Novák, J. Pospíšil, J. Friml, Current Biology 30 (2020) 381–395.e8.
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| PubMed | Europe PMC
S. Tan, M.F. Abas, I. Verstraeten, M. Glanc, G. Molnar, J. Hajny, P. Lasák, I. Petřík, E. Russinova, J. Petrášek, O. Novák, J. Pospíšil, J. Friml, Current Biology 30 (2020) 381–395.e8.
2020 | Journal Article | IST-REx-ID: 7500 |

Auxin canalization and vascular tissue formation by TIR1/AFB-mediated auxin signaling in arabidopsis
E. Mazur, I. Kulik, J. Hajny, J. Friml, New Phytologist 226 (2020) 1375–1383.
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E. Mazur, I. Kulik, J. Hajny, J. Friml, New Phytologist 226 (2020) 1375–1383.
2020 | Thesis | IST-REx-ID: 8822 |

Identification and characterization of the molecular machinery of auxin-dependent canalization during vasculature formation and regeneration
J. Hajny, Identification and Characterization of the Molecular Machinery of Auxin-Dependent Canalization during Vasculature Formation and Regeneration, IST Austria, 2020.
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J. Hajny, Identification and Characterization of the Molecular Machinery of Auxin-Dependent Canalization during Vasculature Formation and Regeneration, IST Austria, 2020.
2020 | Journal Article | IST-REx-ID: 7577 |

Weak convergence for variational inequalities with inertial-type method
Y. Shehu, O.S. Iyiola, Applicable Analysis (2020) 1–25.
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| arXiv
Y. Shehu, O.S. Iyiola, Applicable Analysis (2020) 1–25.
2020 | Journal Article | IST-REx-ID: 8434 |

Lamellipodin tunes cell migration by stabilizing protrusions and promoting adhesion formation
G.A. Dimchev, B. Amiri, A.C. Humphries, M. Schaks, V. Dimchev, T.E.B. Stradal, J. Faix, M. Krause, M. Way, M. Falcke, K. Rottner, Journal of Cell Science 133 (2020).
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G.A. Dimchev, B. Amiri, A.C. Humphries, M. Schaks, V. Dimchev, T.E.B. Stradal, J. Faix, M. Krause, M. Way, M. Falcke, K. Rottner, Journal of Cell Science 133 (2020).
2020 | Journal Article | IST-REx-ID: 7652 |

Gene amplification as a form of population-level gene expression regulation
I. Tomanek, R. Grah, M. Lagator, A.M.C. Andersson, J.P. Bollback, G. Tkačik, C.C. Guet, Nature Ecology & Evolution 4 (2020) 612–625.
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I. Tomanek, R. Grah, M. Lagator, A.M.C. Andersson, J.P. Bollback, G. Tkačik, C.C. Guet, Nature Ecology & Evolution 4 (2020) 612–625.
2020 | Journal Article | IST-REx-ID: 7426 |

Abstraction based verification of stability of polyhedral switched systems
M. Garcia Soto, P. Prabhakar, Nonlinear Analysis: Hybrid Systems 36 (2020).
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| DOI
M. Garcia Soto, P. Prabhakar, Nonlinear Analysis: Hybrid Systems 36 (2020).
2020 | Thesis | IST-REx-ID: 8653 |

The evolution of gene expression by copy number and point mutations
I. Tomanek, The Evolution of Gene Expression by Copy Number and Point Mutations, IST Austria, 2020.
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| DOI
I. Tomanek, The Evolution of Gene Expression by Copy Number and Point Mutations, IST Austria, 2020.
2020 | Conference Paper | IST-REx-ID: 7810 |

Optimal and perfectly parallel algorithms for on-demand data-flow analysis
K. Chatterjee, A.K. Goharshady, R. Ibsen-Jensen, A. Pavlogiannis, in:, European Symposium on Programming, Springer Nature, 2020, pp. 112–140.
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K. Chatterjee, A.K. Goharshady, R. Ibsen-Jensen, A. Pavlogiannis, in:, European Symposium on Programming, Springer Nature, 2020, pp. 112–140.
2020 | Conference Paper | IST-REx-ID: 8728 |

Faster algorithms for quantitative analysis of MCs and MDPs with small treewidth
A. Asadi, K. Chatterjee, A.K. Goharshady, K. Mohammadi, A. Pavlogiannis, in:, Automated Technology for Verification and Analysis, Springer Nature, 2020, pp. 253–270.
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A. Asadi, K. Chatterjee, A.K. Goharshady, K. Mohammadi, A. Pavlogiannis, in:, Automated Technology for Verification and Analysis, Springer Nature, 2020, pp. 253–270.
2020 | Conference Paper | IST-REx-ID: 8089 |

Polynomial invariant generation for non-deterministic recursive programs
K. Chatterjee, H. Fu, A.K. Goharshady, E.K. Goharshady, in:, Proceedings of the 41st ACM SIGPLAN Conference on Programming Language Design and Implementation, Association for Computing Machinery, 2020, pp. 672–687.
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| arXiv
K. Chatterjee, H. Fu, A.K. Goharshady, E.K. Goharshady, in:, Proceedings of the 41st ACM SIGPLAN Conference on Programming Language Design and Implementation, Association for Computing Machinery, 2020, pp. 672–687.
2020 | Journal Article | IST-REx-ID: 6918 |

An efficient algorithm for computing network reliability in small treewidth
A.K. Goharshady, F. Mohammadi, Reliability Engineering and System Safety 193 (2020).
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| arXiv
A.K. Goharshady, F. Mohammadi, Reliability Engineering and System Safety 193 (2020).
2020 | Journal Article | IST-REx-ID: 8986 |

Functional innovations of PIN auxin transporters mark crucial evolutionary transitions during rise of flowering plants
Y. Zhang, L. Rodriguez Solovey, L. Li, X. Zhang, J. Friml, Science Advances 6 (2020).
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| PubMed | Europe PMC
Y. Zhang, L. Rodriguez Solovey, L. Li, X. Zhang, J. Friml, Science Advances 6 (2020).
2020 | Journal Article | IST-REx-ID: 8283 |

AcoMYB4, an Ananas comosus L. MYB transcription factor, functions in osmotic stress through negative regulation of ABA signaling
H. Chen, L. Lai, L. Li, L. Liu, B.H. Jakada, Y. Huang, Q. He, M. Chai, X. Niu, Y. Qin, International Journal of Molecular Sciences 21 (2020).
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| PubMed | Europe PMC
H. Chen, L. Lai, L. Li, L. Liu, B.H. Jakada, Y. Huang, Q. He, M. Chai, X. Niu, Y. Qin, International Journal of Molecular Sciences 21 (2020).
2019 | Journal Article | IST-REx-ID: 301 |

A Feynman–Kac formula for stochastic Dirichlet problems
M. Gerencser, I. Gyöngy, Stochastic Processes and Their Applications 129 (2019) 995–1012.
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| arXiv
M. Gerencser, I. Gyöngy, Stochastic Processes and Their Applications 129 (2019) 995–1012.
2019 | Journal Article | IST-REx-ID: 319 |

Singular SPDEs in domains with boundaries
M. Gerencser, M. Hairer, Probability Theory and Related Fields 173 (2019) 697–758.
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| DOI
M. Gerencser, M. Hairer, Probability Theory and Related Fields 173 (2019) 697–758.
2019 | Preprint | IST-REx-ID: 7950 |

Token swapping on trees
A. Biniaz, K. Jain, A. Lubiw, Z. Masárová, T. Miltzow, D. Mondal, A.M. Naredla, J. Tkadlec, A. Turcotte, ArXiv (n.d.).
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| arXiv
A. Biniaz, K. Jain, A. Lubiw, Z. Masárová, T. Miltzow, D. Mondal, A.M. Naredla, J. Tkadlec, A. Turcotte, ArXiv (n.d.).
2019 | Journal Article | IST-REx-ID: 8 |

The Repo homeodomain transcription factor suppresses hematopoiesis in Drosophila and preserves the glial fate
G. Trébuchet, P.B. Cattenoz, J. Zsámboki, D. Mazaud, D.E. Siekhaus, M. Fanto, A. Giangrande, Journal of Neuroscience 39 (2019) 238–255.
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| PubMed | Europe PMC
G. Trébuchet, P.B. Cattenoz, J. Zsámboki, D. Mazaud, D.E. Siekhaus, M. Fanto, A. Giangrande, Journal of Neuroscience 39 (2019) 238–255.
2019 | Journal Article | IST-REx-ID: 80 |

Bose–Einstein condensation in a dilute, trapped gas at positive temperature
A. Deuchert, R. Seiringer, J. Yngvason, Communications in Mathematical Physics 368 (2019) 723–776.
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A. Deuchert, R. Seiringer, J. Yngvason, Communications in Mathematical Physics 368 (2019) 723–776.
2019 | Conference Paper | IST-REx-ID: 8175 |

New edge asymptotics of skew Young diagrams via free boundaries
D. Betea, J. Bouttier, P. Nejjar, M. Vuletíc, in:, Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics, Formal Power Series and Algebraic Combinatorics, 2019.
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| arXiv
D. Betea, J. Bouttier, P. Nejjar, M. Vuletíc, in:, Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics, Formal Power Series and Algebraic Combinatorics, 2019.
2019 | Preprint | IST-REx-ID: 8184 |

Stronger counterexamples to the topological Tverberg conjecture
S. Avvakumov, R. Karasev, A. Skopenkov, ArXiv (n.d.).
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| arXiv
S. Avvakumov, R. Karasev, A. Skopenkov, ArXiv (n.d.).
2019 | Preprint | IST-REx-ID: 8185 |

Envy-free division using mapping degree
S. Avvakumov, R. Karasev, ArXiv (n.d.).
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| arXiv
S. Avvakumov, R. Karasev, ArXiv (n.d.).
2019 | Book Chapter | IST-REx-ID: 8281
Mathematical models in population genetics
N.H. Barton, A. Etheridge, in:, D. Balding, I. Moltke, J. Marioni (Eds.), Handbook of Statistical Genomics, 4th ed., Wiley, 2019, pp. 115–144.
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N.H. Barton, A. Etheridge, in:, D. Balding, I. Moltke, J. Marioni (Eds.), Handbook of Statistical Genomics, 4th ed., Wiley, 2019, pp. 115–144.
2019 | Conference Paper | IST-REx-ID: 8570 |

ARCH-COMP19 Category Report: Continuous and hybrid systems with linear continuous dynamics
M. Althoff, S. Bak, M. Forets, G. Frehse, N. Kochdumper, R. Ray, C. Schilling, S. Schupp, in:, EPiC Series in Computing, EasyChair, 2019, pp. 14–40.
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M. Althoff, S. Bak, M. Forets, G. Frehse, N. Kochdumper, R. Ray, C. Schilling, S. Schupp, in:, EPiC Series in Computing, EasyChair, 2019, pp. 14–40.
2019 | Journal Article | IST-REx-ID: 5 |

The wonderful compactification for quantum groups
I.V. Ganev, Journal of the London Mathematical Society 99 (2019) 778–806.
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I.V. Ganev, Journal of the London Mathematical Society 99 (2019) 778–806.
2019 | Journal Article | IST-REx-ID: 5678 |

Poisson–Delaunay Mosaics of Order k
H. Edelsbrunner, A. Nikitenko, Discrete and Computational Geometry 62 (2019) 865–878.
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| arXiv
H. Edelsbrunner, A. Nikitenko, Discrete and Computational Geometry 62 (2019) 865–878.
2019 | Journal Article | IST-REx-ID: 5680
Prevalence of legitimate pollinators and nectar robbers and the consequences for fruit set in an Antirrhinum majus hybrid zone
C. Andalo, M. Burrus, S. Paute, C. Lauzeral, D. Field, Botany Letters 166 (2019) 80–92.
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C. Andalo, M. Burrus, S. Paute, C. Lauzeral, D. Field, Botany Letters 166 (2019) 80–92.
2019 | Journal Article | IST-REx-ID: 5789 |

Fluidization-mediated tissue spreading by mitotic cell rounding and non-canonical Wnt signalling
N. Petridou, S. Grigolon, G. Salbreux, E.B. Hannezo, C.-P.J. Heisenberg, Nature Cell Biology 21 (2019) 169–178.
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| PubMed | Europe PMC
N. Petridou, S. Grigolon, G. Salbreux, E.B. Hannezo, C.-P.J. Heisenberg, Nature Cell Biology 21 (2019) 169–178.
2019 | Journal Article | IST-REx-ID: 5790 |

Extending partial representations of circle graphs
S. Chaplick, R. Fulek, P. Klavík, Journal of Graph Theory 91 (2019) 365–394.
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| arXiv
S. Chaplick, R. Fulek, P. Klavík, Journal of Graph Theory 91 (2019) 365–394.
2019 | Book Chapter | IST-REx-ID: 5793
Studying YAP-mediated 3D morphogenesis using fish embryos and human spheroids
Y. Asaoka, H. Morita, H. Furumoto, C.-P.J. Heisenberg, M. Furutani-Seiki, in:, A. Hergovich (Ed.), The Hippo Pathway, Springer, 2019, pp. 167–181.
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Y. Asaoka, H. Morita, H. Furumoto, C.-P.J. Heisenberg, M. Furutani-Seiki, in:, A. Hergovich (Ed.), The Hippo Pathway, Springer, 2019, pp. 167–181.
2019 | Journal Article | IST-REx-ID: 5817 |

Limiting shapes of confined lipid vesicles
B. Kavcic, A. Sakashita, H. Noguchi, P. Ziherl, Soft Matter 15 (2019) 602–614.
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B. Kavcic, A. Sakashita, H. Noguchi, P. Ziherl, Soft Matter 15 (2019) 602–614.
2019 | Journal Article | IST-REx-ID: 5828 |

Assembly responses of hippocampal CA1 place cells predict learned behavior in goal-directed spatial tasks on the radial eight-arm maze
H. Xu, P. Baracskay, J. O’Neill, J.L. Csicsvari, Neuron 101 (2019) 119–132.e4.
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H. Xu, P. Baracskay, J. O’Neill, J.L. Csicsvari, Neuron 101 (2019) 119–132.e4.
2019 | Journal Article | IST-REx-ID: 5856 |

Energy contribution of a point-interacting impurity in a Fermi gas
T. Moser, R. Seiringer, Annales Henri Poincare 20 (2019) 1325–1365.
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| arXiv
T. Moser, R. Seiringer, Annales Henri Poincare 20 (2019) 1325–1365.
2019 | Journal Article | IST-REx-ID: 5857 |

Thrackles: An improved upper bound
R. Fulek, J. Pach, Discrete Applied Mathematics 259 (2019) 266–231.
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| arXiv
R. Fulek, J. Pach, Discrete Applied Mathematics 259 (2019) 266–231.
2019 | Journal Article | IST-REx-ID: 5878 |

State space geometry of the chaotic pilot-wave hydrodynamics
N.B. Budanur, M. Fleury, Chaos: An Interdisciplinary Journal of Nonlinear Science 29 (2019).
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N.B. Budanur, M. Fleury, Chaos: An Interdisciplinary Journal of Nonlinear Science 29 (2019).
2019 | Journal Article | IST-REx-ID: 5886 |

Variational approaches to quantum impurities: from the Fröhlich polaron to the angulon
X. Li, G. Bighin, E. Yakaboylu, M. Lemeshko, Molecular Physics (2019).
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X. Li, G. Bighin, E. Yakaboylu, M. Lemeshko, Molecular Physics (2019).
2019 | Journal Article | IST-REx-ID: 5887 |

Per-session security: Password-based cryptography revisited
G. Demay, P. Gazi, U. Maurer, B. Tackmann, Journal of Computer Security 27 (2019) 75–111.
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G. Demay, P. Gazi, U. Maurer, B. Tackmann, Journal of Computer Security 27 (2019) 75–111.
2019 | Journal Article | IST-REx-ID: 5906 |

Analytically solvable renormalization group for the many-body localization transition
A. Goremykina, R. Vasseur, M. Serbyn, Physical Review Letters 122 (2019).
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A. Goremykina, R. Vasseur, M. Serbyn, Physical Review Letters 122 (2019).
2019 | Journal Article | IST-REx-ID: 5907 |

N-glycans of the microalga Chlorella vulgaris are of the oligomannosidic type but highly methylated
R. Mócsai, R. Figl, C. Troschl, R. Strasser, E. Svehla, M. Windwarder, A. Thader, F. Altmann, Scientific Reports 9 (2019).
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R. Mócsai, R. Figl, C. Troschl, R. Strasser, E. Svehla, M. Windwarder, A. Thader, F. Altmann, Scientific Reports 9 (2019).
2019 | Journal Article | IST-REx-ID: 5908 |

Ionic stress enhances ER–PM connectivity via phosphoinositide-associated SYT1 contact site expansion in Arabidopsis
E. Lee, S. Vanneste, J. Pérez-Sancho, F. Benitez-Fuente, M. Strelau, A.P. Macho, M.A. Botella, J. Friml, A. Rosado, Proceedings of the National Academy of Sciences of the United States of America 116 (2019) 1420–1429.
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E. Lee, S. Vanneste, J. Pérez-Sancho, F. Benitez-Fuente, M. Strelau, A.P. Macho, M.A. Botella, J. Friml, A. Rosado, Proceedings of the National Academy of Sciences of the United States of America 116 (2019) 1420–1429.
2019 | Journal Article | IST-REx-ID: 5911 |

Evolving inversions
R. Faria, K. Johannesson, R.K. Butlin, A.M. Westram, Trends in Ecology and Evolution 34 (2019) 239–248.
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R. Faria, K. Johannesson, R.K. Butlin, A.M. Westram, Trends in Ecology and Evolution 34 (2019) 239–248.
2019 | Journal Article | IST-REx-ID: 5943 |

Experiments on a jet in a crossflow in the low-velocity-ratio regime
L. Klotz, K. Gumowski, J.E. Wesfreid, Journal of Fluid Mechanics 863 (2019) 386–406.
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L. Klotz, K. Gumowski, J.E. Wesfreid, Journal of Fluid Mechanics 863 (2019) 386–406.
2019 | Journal Article | IST-REx-ID: 5944 |

Thermodynamics of duplication thresholds in synthetic protocell systems
B. Corominas-Murtra, Life 9 (2019).
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B. Corominas-Murtra, Life 9 (2019).
2019 | Journal Article | IST-REx-ID: 5945 |

Optimal decoding of cellular identities in a genetic network
M.D. Petkova, G. Tkačik, W. Bialek, E.F. Wieschaus, T. Gregor, Cell 176 (2019) 844–855.e15.
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M.D. Petkova, G. Tkačik, W. Bialek, E.F. Wieschaus, T. Gregor, Cell 176 (2019) 844–855.e15.
2019 | Conference Paper | IST-REx-ID: 5947 |

A simple and practical concurrent non-blocking unbounded graph with linearizable reachability queries
B. Chatterjee, S. Peri, M. Sa, N. Singhal, in:, ACM International Conference Proceeding Series, ACM, 2019, pp. 168–177.
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B. Chatterjee, S. Peri, M. Sa, N. Singhal, in:, ACM International Conference Proceeding Series, ACM, 2019, pp. 168–177.
2019 | Conference Paper | IST-REx-ID: 5948
Termination of nondeterministic probabilistic programs
H. Fu, K. Chatterjee, in:, International Conference on Verification, Model Checking, and Abstract Interpretation, Springer Nature, 2019, pp. 468–490.
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H. Fu, K. Chatterjee, in:, International Conference on Verification, Model Checking, and Abstract Interpretation, Springer Nature, 2019, pp. 468–490.
2019 | Journal Article | IST-REx-ID: 5986 |

A proof of the orbit conjecture for flipping edge-labelled triangulations
A. Lubiw, Z. Masárová, U. Wagner, Discrete & Computational Geometry 61 (2019) 880–898.
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| arXiv
A. Lubiw, Z. Masárová, U. Wagner, Discrete & Computational Geometry 61 (2019) 880–898.
2019 | Journal Article | IST-REx-ID: 6014 |

Elastic alfven waves in elastic turbulence
A. Varshney, V. Steinberg, Nature Communications 10 (2019).
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| arXiv
A. Varshney, V. Steinberg, Nature Communications 10 (2019).
2019 | Journal Article | IST-REx-ID: 6022 |

Genetic dissection of assortative mating behavior
R.M. Merrill, P. Rastas, S.H. Martin, M.C. Melo Hurtado, S. Barker, J. Davey, W.O. Mcmillan, C.D. Jiggins, PLoS Biology 17 (2019).
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R.M. Merrill, P. Rastas, S.H. Martin, M.C. Melo Hurtado, S. Barker, J. Davey, W.O. Mcmillan, C.D. Jiggins, PLoS Biology 17 (2019).
2019 | Journal Article | IST-REx-ID: 6023 |

A SOSEKI-based coordinate system interprets global polarity cues in arabidopsis
S. Yoshida, A. Van Der Schuren, M. Van Dop, L. Van Galen, S. Saiga, M. Adibi, B. Möller, C.A. Ten Hove, P. Marhavý, R. Smith, J. Friml, D. Weijers, Nature Plants 5 (2019) 160–166.
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S. Yoshida, A. Van Der Schuren, M. Van Dop, L. Van Galen, S. Saiga, M. Adibi, B. Möller, C.A. Ten Hove, P. Marhavý, R. Smith, J. Friml, D. Weijers, Nature Plants 5 (2019) 160–166.
2019 | Journal Article | IST-REx-ID: 6025 |

Light-activated Frizzled7 reveals a permissive role of non-canonical wnt signaling in mesendoderm cell migration
D. Capek, M. Smutny, A.M. Tichy, M. Morri, H.L. Janovjak, C.-P.J. Heisenberg, ELife 8 (2019).
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D. Capek, M. Smutny, A.M. Tichy, M. Morri, H.L. Janovjak, C.-P.J. Heisenberg, ELife 8 (2019).
2019 | Journal Article | IST-REx-ID: 6028 |

A solution theory for quasilinear singular SPDEs
M. Gerencser, M. Hairer, Communications on Pure and Applied Mathematics 72 (2019) 1983–2005.
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M. Gerencser, M. Hairer, Communications on Pure and Applied Mathematics 72 (2019) 1983–2005.
2019 | Journal Article | IST-REx-ID: 6029 |

A fast and simple contact printing approach to generate 2D protein nanopatterns
M. Lindner, A. Tresztenyak, G. Fülöp, W. Jahr, A. Prinz, I. Prinz, J.G. Danzl, G.J. Schütz, E. Sevcsik, Frontiers in Chemistry 6 (2019).
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M. Lindner, A. Tresztenyak, G. Fülöp, W. Jahr, A. Prinz, I. Prinz, J.G. Danzl, G.J. Schütz, E. Sevcsik, Frontiers in Chemistry 6 (2019).
2019 | Conference Paper | IST-REx-ID: 6035 |

JuliaReach: A toolbox for set-based reachability
S. Bogomolov, M. Forets, G. Frehse, K. Potomkin, C. Schilling, in:, Proceedings of the 22nd International Conference on Hybrid Systems: Computation and Control, ACM, 2019, pp. 39–44.
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| arXiv
S. Bogomolov, M. Forets, G. Frehse, K. Potomkin, C. Schilling, in:, Proceedings of the 22nd International Conference on Hybrid Systems: Computation and Control, ACM, 2019, pp. 39–44.
2019 | Conference Paper | IST-REx-ID: 6042 |

Semantic fault localization and suspiciousness ranking
M. Christakis, M. Heizmann, M.N. Mansur, C. Schilling, V. Wüstholz, in:, 25th International Conference on Tools and Algorithms for the Construction and Analysis of Systems , Springer Nature, 2019, pp. 226–243.
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M. Christakis, M. Heizmann, M.N. Mansur, C. Schilling, V. Wüstholz, in:, 25th International Conference on Tools and Algorithms for the Construction and Analysis of Systems , Springer Nature, 2019, pp. 226–243.
2019 | Journal Article | IST-REx-ID: 6046 |

Temporal order and precision of complex stress responses in individual bacteria
K. Mitosch, G. Rieckh, M.T. Bollenbach, Molecular Systems Biology 15 (2019).
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K. Mitosch, G. Rieckh, M.T. Bollenbach, Molecular Systems Biology 15 (2019).
2019 | Journal Article | IST-REx-ID: 6049 |

Feedback-induced self-oscillations in large interacting systems subjected to phase transitions
D. De Martino, Journal of Physics A: Mathematical and Theoretical 52 (2019).
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D. De Martino, Journal of Physics A: Mathematical and Theoretical 52 (2019).
2019 | Journal Article | IST-REx-ID: 6050 |

Two circles and only a straightedge
A. Akopyan, R. Fedorov, Proceedings of the American Mathematical Society 147 (2019) 91–102.
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| arXiv
A. Akopyan, R. Fedorov, Proceedings of the American Mathematical Society 147 (2019) 91–102.
2019 | Journal Article | IST-REx-ID: 6052 |

A practical guide to optimization in X10 expansion microscopy
S.M. Truckenbrodt, C.M. Sommer, S.O. Rizzoli, J.G. Danzl, Nature Protocols 14 (2019) 832–863.
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| PubMed | Europe PMC
S.M. Truckenbrodt, C.M. Sommer, S.O. Rizzoli, J.G. Danzl, Nature Protocols 14 (2019) 832–863.
2019 | Journal Article | IST-REx-ID: 6053 |

Quantum electromechanics of a hypersonic crystal
M. Kalaee, M. Mirhosseini, P.B. Dieterle, M. Peruzzo, J.M. Fink, O. Painter, Nature Nanotechnology 14 (2019) 334–339.
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| Download Submitted Version (ext.)
M. Kalaee, M. Mirhosseini, P.B. Dieterle, M. Peruzzo, J.M. Fink, O. Painter, Nature Nanotechnology 14 (2019) 334–339.
2019 | Research Data | IST-REx-ID: 6060 |

Supplementary data for "Sex-biased gene expression and dosage compensation on the Artemia franciscana Z-chromosome" (Huylman, Toups et al., 2019).
B. Vicoso, (2019).
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B. Vicoso, (2019).
2019 | Research Data | IST-REx-ID: 6062 |

Supplementary Code and Data for the paper "The Entorhinal Cognitive Map is Attracted to Goals"
M. Nardin, (2019).
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M. Nardin, (2019).
2019 | Journal Article | IST-REx-ID: 6069 |

Stokes flow analogous to viscous electron current in graphene
J. Mayzel, V. Steinberg, A. Varshney, Nature Communications 10 (2019).
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J. Mayzel, V. Steinberg, A. Varshney, Nature Communications 10 (2019).
2019 | Thesis | IST-REx-ID: 6071 |

Coevolution of transcription factors and their binding sites in sequence space
R. Prizak, Coevolution of Transcription Factors and Their Binding Sites in Sequence Space, IST Austria, 2019.
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R. Prizak, Coevolution of Transcription Factors and Their Binding Sites in Sequence Space, IST Austria, 2019.
2019 | Research Data | IST-REx-ID: 6074 |

Supplementary data for the research paper "Haploinsufficiency of the intellectual disability gene SETD5 disturbs developmental gene expression and cognition"
C. Dotter, G. Novarino, (2019).
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C. Dotter, G. Novarino, (2019).
2019 | Journal Article | IST-REx-ID: 6944 |

KS(conf): A light-weight test if a multiclass classifier operates outside of its specifications
R. Sun, C. Lampert, International Journal of Computer Vision 128 (2019) 970–995.
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R. Sun, C. Lampert, International Journal of Computer Vision 128 (2019) 970–995.
2019 | Journal Article | IST-REx-ID: 6955 |

Universal physics of bound states of a few charged particles
C.H. Schmickler, H.-W. Hammer, A. Volosniev, Physics Letters B 798 (2019).
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| DOI
| arXiv
C.H. Schmickler, H.-W. Hammer, A. Volosniev, Physics Letters B 798 (2019).
2019 | Thesis | IST-REx-ID: 6957 |

Onset of turbulence in plane Poiseuille flow
C.S. Paranjape, Onset of Turbulence in Plane Poiseuille Flow, IST Austria, 2019.
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| DOI
C.S. Paranjape, Onset of Turbulence in Plane Poiseuille Flow, IST Austria, 2019.
2019 | Journal Article | IST-REx-ID: 6972 |

Self-stabilising Byzantine clock synchronisation is almost as easy as consensus
C. Lenzen, J. Rybicki, Journal of the ACM 66 (2019).
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| DOI
| arXiv
C. Lenzen, J. Rybicki, Journal of the ACM 66 (2019).
2019 | Journal Article | IST-REx-ID: 6978 |

Geometry of transient chaos in streamwise-localized pipe flow turbulence
N.B. Budanur, A. Dogra, B. Hof, Physical Review Fluids 4 (2019) 102401.
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| arXiv
N.B. Budanur, A. Dogra, B. Hof, Physical Review Fluids 4 (2019) 102401.
2019 | Journal Article | IST-REx-ID: 6979
Gut homeostasis: Active migration of intestinal epithelial cells in tissue renewal
A. Kopf, M.K. Sixt, Current Biology 29 (2019) R1091–R1093.
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| DOI
| PubMed | Europe PMC
A. Kopf, M.K. Sixt, Current Biology 29 (2019) R1091–R1093.
2019 | Journal Article | IST-REx-ID: 6980 |

Tissue rheology in embryonic organization
N. Petridou, C.-P.J. Heisenberg, The EMBO Journal 38 (2019).
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| PubMed | Europe PMC
N. Petridou, C.-P.J. Heisenberg, The EMBO Journal 38 (2019).
2019 | Journal Article | IST-REx-ID: 6982 |

Recognizing weak embeddings of graphs
H. Akitaya, R. Fulek, C. Tóth, ACM Transactions on Algorithms 15 (2019).
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| arXiv
H. Akitaya, R. Fulek, C. Tóth, ACM Transactions on Algorithms 15 (2019).
2019 | Journal Article | IST-REx-ID: 6983 |

Clustering of activated CD8 T cells around Malaria-infected hepatocytes is rapid and is driven by antigen-specific cells
R.K. Kelemen, H. Rajakaruna, I. Cockburn, V. Ganusov, Frontiers in Immunology 10 (2019).
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| PubMed | Europe PMC
R.K. Kelemen, H. Rajakaruna, I. Cockburn, V. Ganusov, Frontiers in Immunology 10 (2019).