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4521 Publications
2018 | Conference Paper | IST-REx-ID: 81 |

Monitoring temporal logic with clock variables
A. Elgyütt, T. Ferrere, T.A. Henzinger, in:, Springer, 2018, pp. 53–70.
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A. Elgyütt, T. Ferrere, T.A. Henzinger, in:, Springer, 2018, pp. 53–70.
2018 | Journal Article | IST-REx-ID: 76 |

Near-optimal self-stabilising counting and firing squads
C. Lenzen, J. Rybicki, Distributed Computing (2018).
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C. Lenzen, J. Rybicki, Distributed Computing (2018).
2018 | Journal Article | IST-REx-ID: 530 |

Multiple covers with balls I: Inclusion–exclusion
H. Edelsbrunner, M. Iglesias Ham, Computational Geometry: Theory and Applications 68 (2018) 119–133.
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H. Edelsbrunner, M. Iglesias Ham, Computational Geometry: Theory and Applications 68 (2018) 119–133.
2018 | Journal Article | IST-REx-ID: 307 |

Nanoscopy of pairs of atoms by fluorescence in a magnetic field
E. Redchenko, A. Makarov, V. Yudson, Physical Review A - Atomic, Molecular, and Optical Physics 97 (2018).
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E. Redchenko, A. Makarov, V. Yudson, Physical Review A - Atomic, Molecular, and Optical Physics 97 (2018).
2018 | Journal Article | IST-REx-ID: 279 |

Negative selection in tumor genome evolution acts on essential cellular functions and the immunopeptidome
L. Zapata, O. Pich, L. Serrano, F. Kondrashov, S. Ossowski, M. Schaefer, Genome Biology 19 (2018).
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L. Zapata, O. Pich, L. Serrano, F. Kondrashov, S. Ossowski, M. Schaefer, Genome Biology 19 (2018).
2018 | Journal Article | IST-REx-ID: 145 |

Newly produced synaptic vesicle proteins are preferentially used in synaptic transmission
S.M. Truckenbrodt, A. Viplav, S. Jähne, A. Vogts, A. Denker, H. Wildhagen, E. Fornasiero, S. Rizzoli, The EMBO Journal 37 (2018).
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| PubMed | Europe PMC
S.M. Truckenbrodt, A. Viplav, S. Jähne, A. Vogts, A. Denker, H. Wildhagen, E. Fornasiero, S. Rizzoli, The EMBO Journal 37 (2018).
2018 | Journal Article | IST-REx-ID: 462 |

NHX antiporters regulate the pH of endoplasmic reticulum and auxin-mediated development
L. Fan, L. Zhao, W. Hu, W. Li, O. Novák, M. Strnad, S. Simon, J. Friml, J. Shen, L. Jiang, Q. Qiu, Plant, Cell and Environment 41 (2018) 850–864.
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L. Fan, L. Zhao, W. Hu, W. Li, O. Novák, M. Strnad, S. Simon, J. Friml, J. Shen, L. Jiang, Q. Qiu, Plant, Cell and Environment 41 (2018) 850–864.
2018 | Journal Article | IST-REx-ID: 519 |

Non-linear dynamics and alternating ‘flip’ solutions in ferrofluidic Taylor-Couette flow
S. Altmeyer, Journal of Magnetism and Magnetic Materials 452 (2018) 427–441.
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S. Altmeyer, Journal of Magnetism and Magnetic Materials 452 (2018) 427–441.
2018 | Conference Paper | IST-REx-ID: 5679 |

New approaches for almost-sure termination of probabilistic programs
M. Huang, H. Fu, K. Chatterjee, in:, S. Ryu (Ed.), Springer, 2018, pp. 181–201.
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M. Huang, H. Fu, K. Chatterjee, in:, S. Ryu (Ed.), Springer, 2018, pp. 181–201.
2018 | Journal Article | IST-REx-ID: 546
Neural stem cells in neuropsychiatric disorders
R. Sacco, E. Cacci, G. Novarino, Current Opinion in Neurobiology 48 (2018) 131–138.
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R. Sacco, E. Cacci, G. Novarino, Current Opinion in Neurobiology 48 (2018) 131–138.
2018 | Research Data Reference | IST-REx-ID: 9812 |

Additional file 2: Of negative selection in tumor genome evolution acts on essential cellular functions and the immunopeptidome
L. Zapata, O. Pich, L. Serrano, F. Kondrashov, S. Ossowski, M. Schaefer, (2018).
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L. Zapata, O. Pich, L. Serrano, F. Kondrashov, S. Ossowski, M. Schaefer, (2018).
2018 | Research Data Reference | IST-REx-ID: 9811 |

Additional file 1: Of negative selection in tumor genome evolution acts on essential cellular functions and the immunopeptidome
L. Zapata, O. Pich, L. Serrano, F. Kondrashov, S. Ossowski, M. Schaefer, (2018).
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| DOI
| Download Preprint (ext.)
L. Zapata, O. Pich, L. Serrano, F. Kondrashov, S. Ossowski, M. Schaefer, (2018).
2018 | Journal Article | IST-REx-ID: 292 |

Nonlinear decoding of a complex movie from the mammalian retina
V. Botella Soler, S. Deny, G.S. Martius, O. Marre, G. Tkačik, PLoS Computational Biology 14 (2018).
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V. Botella Soler, S. Deny, G.S. Martius, O. Marre, G. Tkačik, PLoS Computational Biology 14 (2018).
2018 | Journal Article | IST-REx-ID: 20 |

Norepinephrine triggers an immediate-early regulatory network response in primary human white adipocytes
J. Higareda Almaraz, M. Karbiener, M. Giroud, F. Pauler, T. Gerhalter, S. Herzig, M. Scheideler, BMC Genomics 19 (2018).
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J. Higareda Almaraz, M. Karbiener, M. Giroud, F. Pauler, T. Gerhalter, S. Herzig, M. Scheideler, BMC Genomics 19 (2018).
2018 | Research Data | IST-REx-ID: 5584 |

Nonlinear decoding of a complex movie from the mammalian retina
S. Deny, O. Marre, V. Botella-Soler, G.S. Martius, G. Tkačik, (2018).
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S. Deny, O. Marre, V. Botella-Soler, G.S. Martius, G. Tkačik, (2018).
2018 | Journal Article | IST-REx-ID: 107 |

Non-malleable codes
S. Dziembowski, K.Z. Pietrzak, D. Wichs, Journal of the ACM 65 (2018).
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S. Dziembowski, K.Z. Pietrzak, D. Wichs, Journal of the ACM 65 (2018).
2018 | Journal Article | IST-REx-ID: 5676 |

Occluding junctions as novel regulators of tissue mechanics during wound repair
L. Carvalho, P. Patricio, S. Ponte, C.-P.J. Heisenberg, L. Almeida, A.S. Nunes, N.A.M. Araújo, A. Jacinto, Journal of Cell Biology 217 (2018) 4267–4283.
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L. Carvalho, P. Patricio, S. Ponte, C.-P.J. Heisenberg, L. Almeida, A.S. Nunes, N.A.M. Araújo, A. Jacinto, Journal of Cell Biology 217 (2018) 4267–4283.
2018 | Journal Article | IST-REx-ID: 19 |

Nonoptimal gene expression creates latent potential for antibiotic resistance
A. Palmer, R.P. Chait, R. Kishony, Molecular Biology and Evolution 35 (2018) 2669–2684.
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A. Palmer, R.P. Chait, R. Kishony, Molecular Biology and Evolution 35 (2018) 2669–2684.
2018 | Research Data Reference | IST-REx-ID: 9807 |

Additional file 1: Of Norepinephrine triggers an immediate-early regulatory network response in primary human white adipocytes
J. Higareda Almaraz, M. Karbiener, M. Giroud, F. Pauler, T. Gerhalter, S. Herzig, M. Scheideler, (2018).
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| Download Published Version (ext.)
J. Higareda Almaraz, M. Karbiener, M. Giroud, F. Pauler, T. Gerhalter, S. Herzig, M. Scheideler, (2018).
2018 | Research Data Reference | IST-REx-ID: 9808 |

Additional file 3: Of Norepinephrine triggers an immediate-early regulatory network response in primary human white adipocytes
J. Higareda Almaraz, M. Karbiener, M. Giroud, F. Pauler, T. Gerhalter, S. Herzig, M. Scheideler, (2018).
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| Files available
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| Download Published Version (ext.)
J. Higareda Almaraz, M. Karbiener, M. Giroud, F. Pauler, T. Gerhalter, S. Herzig, M. Scheideler, (2018).
2018 | Conference Paper | IST-REx-ID: 193 |

On the memory hardness of data independent password hashing functions
J.F. Alwen, P. Gazi, C. Kamath Hosdurg, K. Klein, G.F. Osang, K.Z. Pietrzak, L. Reyzin, M. Rolinek, M. Rybar, in:, Proceedings of the 2018 on Asia Conference on Computer and Communication Security, ACM, 2018, pp. 51–65.
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J.F. Alwen, P. Gazi, C. Kamath Hosdurg, K. Klein, G.F. Osang, K.Z. Pietrzak, L. Reyzin, M. Rolinek, M. Rybar, in:, Proceedings of the 2018 on Asia Conference on Computer and Communication Security, ACM, 2018, pp. 51–65.
2018 | Conference Paper | IST-REx-ID: 300 |

On the bit security of cryptographic primitives
D. Micciancio, M. Walter, in:, Springer, 2018, pp. 3–28.
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D. Micciancio, M. Walter, in:, Springer, 2018, pp. 3–28.
2018 | Journal Article | IST-REx-ID: 312 |

On the optimality of the FCC lattice for soft sphere packing
H. Edelsbrunner, M. Iglesias Ham, SIAM J Discrete Math 32 (2018) 750–782.
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H. Edelsbrunner, M. Iglesias Ham, SIAM J Discrete Math 32 (2018) 750–782.
2018 | Journal Article | IST-REx-ID: 409 |

On the number of non-hexagons in a planar tiling
A. Akopyan, Comptes Rendus Mathematique 356 (2018) 412–414.
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| arXiv
A. Akopyan, Comptes Rendus Mathematique 356 (2018) 412–414.
2018 | Journal Article | IST-REx-ID: 419 |

Partners and rivals in direct reciprocity
C. Hilbe, K. Chatterjee, M. Nowak, Nature Human Behaviour 2 (2018) 469–477.
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C. Hilbe, K. Chatterjee, M. Nowak, Nature Human Behaviour 2 (2018) 469–477.
2018 | Conference Paper | IST-REx-ID: 78 |

Online timed pattern matching using automata
A. Bakhirkin, T. Ferrere, D. Nickovic, O. Maler, E. Asarin, in:, Springer, 2018, pp. 215–232.
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A. Bakhirkin, T. Ferrere, D. Nickovic, O. Maler, E. Asarin, in:, Springer, 2018, pp. 215–232.
2018 | Journal Article | IST-REx-ID: 317 |

Palladium gates for reproducible quantum dots in silicon
M. Brauns, S. Amitonov, P. Spruijtenburg, F. Zwanenburg, Scientific Reports 8 (2018).
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M. Brauns, S. Amitonov, P. Spruijtenburg, F. Zwanenburg, Scientific Reports 8 (2018).
2018 | Journal Article | IST-REx-ID: 194 |

Oxytocin-like signaling in ants influences metabolic gene expression and locomotor activity
Z. Liutkeviciute, E. Gil Mansilla, T. Eder, B.E. Casillas Perez, M. Giulia Di Giglio, E. Muratspahić, F. Grebien, T. Rattei, M. Muttenthaler, S. Cremer, C. Gruber, The FASEB Journal 32 (2018) 6808–6821.
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Z. Liutkeviciute, E. Gil Mansilla, T. Eder, B.E. Casillas Perez, M. Giulia Di Giglio, E. Muratspahić, F. Grebien, T. Rattei, M. Muttenthaler, S. Cremer, C. Gruber, The FASEB Journal 32 (2018) 6808–6821.
2018 | Journal Article | IST-REx-ID: 159 |

Optical control of L-type Ca2+ channels using a diltiazem photoswitch
T. Fehrentz, F. Huber, N. Hartrampf, T. Bruegmann, J. Frank, N. Fine, D. Malan, J.G. Danzl, D. Tikhonov, M. Sumser, P. Sasse, D. Hodson, B. Zhorov, N. Klocker, D. Trauner, Nature Chemical Biology 14 (2018) 764–767.
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T. Fehrentz, F. Huber, N. Hartrampf, T. Bruegmann, J. Frank, N. Fine, D. Malan, J.G. Danzl, D. Tikhonov, M. Sumser, P. Sasse, D. Hodson, B. Zhorov, N. Klocker, D. Trauner, Nature Chemical Biology 14 (2018) 764–767.
2018 | Conference Paper | IST-REx-ID: 79 |

Parameter-independent strategies for pMDPs via POMDPs
S. Arming, E. Bartocci, K. Chatterjee, J.P. Katoen, A. Sokolova, in:, Springer, 2018, pp. 53–70.
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S. Arming, E. Bartocci, K. Chatterjee, J.P. Katoen, A. Sokolova, in:, Springer, 2018, pp. 53–70.
2018 | Journal Article | IST-REx-ID: 400 |

Persistence of translational symmetry in the BCS model with radial pair interaction
A. Deuchert, A. Geisinge, C. Hainzl, M. Loss, Annales Henri Poincare 19 (2018) 1507–1527.
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A. Deuchert, A. Geisinge, C. Hainzl, M. Loss, Annales Henri Poincare 19 (2018) 1507–1527.
2018 | Journal Article | IST-REx-ID: 406 |

Probabilistic models of individual and collective animal behavior
K. Bod’Ová, G. Mitchell, R. Harpaz, E. Schneidman, G. Tkačik, PLoS One 13 (2018).
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K. Bod’Ová, G. Mitchell, R. Harpaz, E. Schneidman, G. Tkačik, PLoS One 13 (2018).
2018 | Journal Article | IST-REx-ID: 457
Phage-host population dynamics promotes prophage acquisition in bacteria with innate immunity
M. Pleska, M. Lang, D. Refardt, B. Levin, C.C. Guet, Nature Ecology and Evolution 2 (2018) 359–366.
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M. Pleska, M. Lang, D. Refardt, B. Levin, C.C. Guet, Nature Ecology and Evolution 2 (2018) 359–366.
2018 | Journal Article | IST-REx-ID: 55 |

Protection against the lethal side effects of social immunity in ants
C. Pull, S. Metzler, E. Naderlinger, S. Cremer, Current Biology 28 (2018) R1139–R1140.
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C. Pull, S. Metzler, E. Naderlinger, S. Cremer, Current Biology 28 (2018) R1139–R1140.
2018 | Journal Article | IST-REx-ID: 181 |

Power law decay for systems of randomly coupled differential equations
L. Erdös, T.H. Krüger, D.T. Renfrew, SIAM Journal on Mathematical Analysis 50 (2018) 3271–3290.
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L. Erdös, T.H. Krüger, D.T. Renfrew, SIAM Journal on Mathematical Analysis 50 (2018) 3271–3290.
2018 | Journal Article | IST-REx-ID: 322 |

Quantizations of multiplicative hypertoric varieties at a root of unity
I.V. Ganev, Journal of Algebra 506 (2018) 92–128.
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I.V. Ganev, Journal of Algebra 506 (2018) 92–128.
2018 | Research Data Reference | IST-REx-ID: 9831
Implementation of the inference method in Matlab
K. Bod’Ová, G. Mitchell, R. Harpaz, E. Schneidman, G. Tkačik, (2018).
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K. Bod’Ová, G. Mitchell, R. Harpaz, E. Schneidman, G. Tkačik, (2018).
2018 | Conference Paper | IST-REx-ID: 142 |

Reachable set over-approximation for nonlinear systems using piecewise barrier tubes
H. Kong, E. Bartocci, T.A. Henzinger, in:, Springer, 2018, pp. 449–467.
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H. Kong, E. Bartocci, T.A. Henzinger, in:, Springer, 2018, pp. 449–467.
2018 | Journal Article | IST-REx-ID: 427 |

Quantum interference in laser spectroscopy of highly charged lithiumlike ions
P. Amaro, U. Loureiro, L. Safari, F. Fratini, P. Indelicato, T. Stöhlker, J. Santos, Physical Review A - Atomic, Molecular, and Optical Physics 97 (2018).
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P. Amaro, U. Loureiro, L. Safari, F. Fratini, P. Indelicato, T. Stöhlker, J. Santos, Physical Review A - Atomic, Molecular, and Optical Physics 97 (2018).
2018 | Journal Article | IST-REx-ID: 44 |

Quantum scarred eigenstates in a Rydberg atom chain: Entanglement, breakdown of thermalization, and stability to perturbations
C.J. Turner, A. Michailidis, D.A. Abanin, M. Serbyn, Z. Papić, Physical Review B 98 (2018).
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C.J. Turner, A. Michailidis, D.A. Abanin, M. Serbyn, Z. Papić, Physical Review B 98 (2018).
2018 | Conference Paper | IST-REx-ID: 309 |

Recognizing weak embeddings of graphs
H. Akitaya, R. Fulek, C. Tóth, in:, ACM, 2018, pp. 274–292.
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H. Akitaya, R. Fulek, C. Tóth, in:, ACM, 2018, pp. 274–292.
2018 | Journal Article | IST-REx-ID: 5794 |

Quantum groups as hidden symmetries of quantum impurities
E. Yakaboylu, M. Shkolnikov, M. Lemeshko, Physical Review Letters 121 (2018).
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E. Yakaboylu, M. Shkolnikov, M. Lemeshko, Physical Review Letters 121 (2018).
2018 | Journal Article | IST-REx-ID: 87 |

Random inscribed polytopes have similar radius functions as Poisson-Delaunay mosaics
H. Edelsbrunner, A. Nikitenko, Annals of Applied Probability 28 (2018) 3215–3238.
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H. Edelsbrunner, A. Nikitenko, Annals of Applied Probability 28 (2018) 3215–3238.
2018 | Journal Article | IST-REx-ID: 192 |

Rapid and reversible root growth inhibition by TIR1 auxin signalling
M. Fendrych, M. Akhmanova, J. Merrin, M. Glanc, S. Hagihara, K. Takahashi, N. Uchida, K.U. Torii, J. Friml, Nature Plants 4 (2018) 453–459.
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| PubMed | Europe PMC
M. Fendrych, M. Akhmanova, J. Merrin, M. Glanc, S. Hagihara, K. Takahashi, N. Uchida, K.U. Torii, J. Friml, Nature Plants 4 (2018) 453–459.
2018 | Journal Article | IST-REx-ID: 14 |

Relative contribution of PIN-containing secretory vesicles and plasma membrane PINs to the directed auxin transport: Theoretical estimation
S. Hille, M. Akhmanova, M. Glanc, A.J. Johnson, J. Friml, International Journal of Molecular Sciences 19 (2018).
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S. Hille, M. Akhmanova, M. Glanc, A.J. Johnson, J. Friml, International Journal of Molecular Sciences 19 (2018).
2018 | Journal Article | IST-REx-ID: 39 |

Replicability of introgression under linked, polygenic selection
H. Sachdeva, N.H. Barton, Genetics 210 (2018) 1411–1427.
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H. Sachdeva, N.H. Barton, Genetics 210 (2018) 1411–1427.
2018 | Journal Article | IST-REx-ID: 420 |

Renormalization of the superfluid density in the two-dimensional BCS-BEC crossover
G. Bighin, L. Salasnich, International Journal of Modern Physics B 32 (2018) 1840022.
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G. Bighin, L. Salasnich, International Journal of Modern Physics B 32 (2018) 1840022.
2018 | Journal Article | IST-REx-ID: 38 |

Selection and gene flow shape genomic islands that control floral guides
H. Tavares, A. Whitley, D. Field, D. Bradley, M. Couchman, L. Copsey, J. Elleouet, M. Burrus, C. Andalo, M. Li, Q. Li, Y. Xue, A.B. Rebocho, N.H. Barton, E. Coen, PNAS 115 (2018) 11006–11011.
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| PubMed | Europe PMC
H. Tavares, A. Whitley, D. Field, D. Bradley, M. Couchman, L. Copsey, J. Elleouet, M. Burrus, C. Andalo, M. Li, Q. Li, Y. Xue, A.B. Rebocho, N.H. Barton, E. Coen, PNAS 115 (2018) 11006–11011.
2018 | Journal Article | IST-REx-ID: 542 |

Complex history and differentiation patterns of the t-haplotype, a mouse meiotic driver
R.K. Kelemen, B. Vicoso, Genetics 208 (2018) 365–375.
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R.K. Kelemen, B. Vicoso, Genetics 208 (2018) 365–375.
2018 | Conference Paper | IST-REx-ID: 155 |

Routing thermal noise through quantum networks
A. Xuereb, M. Aquilina, S. Barzanjeh, in:, D.L. Andrews, A. Ostendorf, A.J. Bain, J.M. Nunzi (Eds.), SPIE, 2018.
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A. Xuereb, M. Aquilina, S. Barzanjeh, in:, D.L. Andrews, A. Ostendorf, A.J. Bain, J.M. Nunzi (Eds.), SPIE, 2018.
2018 | Journal Article | IST-REx-ID: 5767 |

Revealing hidden spin-momentum locking in a high-temperature cuprate superconductor
K. Gotlieb, C.-Y. Lin, M. Serbyn, W. Zhang, C.L. Smallwood, C. Jozwiak, H. Eisaki, Z. Hussain, A. Vishwanath, A. Lanzara, Science 362 (2018) 1271–1275.
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K. Gotlieb, C.-Y. Lin, M. Serbyn, W. Zhang, C.L. Smallwood, C. Jozwiak, H. Eisaki, Z. Hussain, A. Vishwanath, A. Lanzara, Science 362 (2018) 1271–1275.
2018 | Journal Article | IST-REx-ID: 434
Safety-assured model-driven design of the multifunction vehicle bus controller
Y. Jiang, H. Liu, H. Song, H. Kong, R. Wang, Y. Guan, L. Sha, IEEE Transactions on Intelligent Transportation Systems 19 (2018) 3320–3333.
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Y. Jiang, H. Liu, H. Song, H. Kong, R. Wang, Y. Guan, L. Sha, IEEE Transactions on Intelligent Transportation Systems 19 (2018) 3320–3333.
2018 | Journal Article | IST-REx-ID: 162 |

Signals from the brain and olfactory epithelium control shaping of the mammalian nasal capsule cartilage
Kaucka M, Petersen J, Tesarova M, Szarowska B, Kastriti M, Xie M, Kicheva A, Annusver K, Kasper M, Symmons O, Pan L, Spitz F, Kaiser J, Hovorakova M, Zikmund T, Sunadome K, Matise MP, Wang H, Marklund U, Abdo H, Ernfors P, Maire P, Wurmser M, Chagin AS, Fried K, Adameyko I. 2018. Signals from the brain and olfactory epithelium control shaping of the mammalian nasal capsule cartilage. eLife. 7, e34465.
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Kaucka M, Petersen J, Tesarova M, Szarowska B, Kastriti M, Xie M, Kicheva A, Annusver K, Kasper M, Symmons O, Pan L, Spitz F, Kaiser J, Hovorakova M, Zikmund T, Sunadome K, Matise MP, Wang H, Marklund U, Abdo H, Ernfors P, Maire P, Wurmser M, Chagin AS, Fried K, Adameyko I. 2018. Signals from the brain and olfactory epithelium control shaping of the mammalian nasal capsule cartilage. eLife. 7, e34465.
2018 | Conference Paper | IST-REx-ID: 302 |

Simple proofs of sequential work
B. Cohen, K.Z. Pietrzak, in:, Springer, 2018, pp. 451–467.
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B. Cohen, K.Z. Pietrzak, in:, Springer, 2018, pp. 451–467.
2018 | Journal Article | IST-REx-ID: 31 |

Separating intrinsic interactions from extrinsic correlations in a network of sensory neurons
U. Ferrari, S. Deny, M.J. Chalk, G. Tkačik, O. Marre, T. Mora, Physical Review E 98 (2018).
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U. Ferrari, S. Deny, M.J. Chalk, G. Tkačik, O. Marre, T. Mora, Physical Review E 98 (2018).
2018 | Journal Article | IST-REx-ID: 22 |

Sensitivity limits of millimeter-wave photonic radiometers based on efficient electro-optic upconverters
G. Botello, F. Sedlmeir, A.R. Rueda Sanchez, K. Abdalmalak, E. Brown, G. Leuchs, S. Preu, D. Segovia Vargas, D. Strekalov, L. Munoz, H. Schwefel, Optica 5 (2018) 1210–1219.
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G. Botello, F. Sedlmeir, A.R. Rueda Sanchez, K. Abdalmalak, E. Brown, G. Leuchs, S. Preu, D. Segovia Vargas, D. Strekalov, L. Munoz, H. Schwefel, Optica 5 (2018) 1210–1219.
2018 | Journal Article | IST-REx-ID: 64 |

Self-organized criticality and pattern emergence through the lens of tropical geometry
N. Kalinin, A. Guzmán Sáenz, Y. Prieto, M. Shkolnikov, V. Kalinina, E. Lupercio, PNAS: Proceedings of the National Academy of Sciences of the United States of America 115 (2018) E8135–E8142.
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N. Kalinin, A. Guzmán Sáenz, Y. Prieto, M. Shkolnikov, V. Kalinina, E. Lupercio, PNAS: Proceedings of the National Academy of Sciences of the United States of America 115 (2018) E8135–E8142.
2018 | Research Data Reference | IST-REx-ID: 9838 |

Data from: Signals from the brain and olfactory epithelium control shaping of the mammalian nasal capsule cartilage
Kaucka M, Petersen J, Tesarova M, Szarowska B, Kastriti ME, Xie M, Kicheva A, Annusver K, Kasper M, Symmons O, Pan L, Spitz F, Kaiser J, Hovorakova M, Zikmund T, Sunadome K, Matise MP, Wang H, Marklund U, Abdo H, Ernfors P, Maire P, Wurmser M, Chagin AS, Fried K, Adameyko I. 2018. Data from: Signals from the brain and olfactory epithelium control shaping of the mammalian nasal capsule cartilage, Dryad, 10.5061/dryad.f1s76f2.
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Kaucka M, Petersen J, Tesarova M, Szarowska B, Kastriti ME, Xie M, Kicheva A, Annusver K, Kasper M, Symmons O, Pan L, Spitz F, Kaiser J, Hovorakova M, Zikmund T, Sunadome K, Matise MP, Wang H, Marklund U, Abdo H, Ernfors P, Maire P, Wurmser M, Chagin AS, Fried K, Adameyko I. 2018. Data from: Signals from the brain and olfactory epithelium control shaping of the mammalian nasal capsule cartilage, Dryad, 10.5061/dryad.f1s76f2.
2018 | Journal Article | IST-REx-ID: 41 |

Sk2 channels associate with mGlu1α receptors and CaV2.1 channels in Purkinje cells
R. Luján, C. Aguado, F. Ciruela, X. Arus, A. Martín Belmonte, R. Alfaro Ruiz, J. Martinez Gomez, L. De La Ossa, M. Watanabe, J. Adelman, R. Shigemoto, Y. Fukazawa, Frontiers in Cellular Neuroscience 12 (2018).
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R. Luján, C. Aguado, F. Ciruela, X. Arus, A. Martín Belmonte, R. Alfaro Ruiz, J. Martinez Gomez, L. De La Ossa, M. Watanabe, J. Adelman, R. Shigemoto, Y. Fukazawa, Frontiers in Cellular Neuroscience 12 (2018).
2018 | Journal Article | IST-REx-ID: 23 |

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L. Vukušić, J. Kukucka, H. Watzinger, J.M. Milem, F. Schäffler, G. Katsaros, Nano Letters 18 (2018) 7141–7145.
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L. Vukušić, J. Kukucka, H. Watzinger, J.M. Milem, F. Schäffler, G. Katsaros, Nano Letters 18 (2018) 7141–7145.
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Snapshot based synchronization: A fast replacement for Hand-over-Hand locking
E. Gilad, T.A. Brown, M. Oskin, Y. Etsion, in:, Springer, 2018, pp. 465–479.
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E. Gilad, T.A. Brown, M. Oskin, Y. Etsion, in:, Springer, 2018, pp. 465–479.
2018 | Thesis | IST-REx-ID: 69 |

Charge sensing and spin relaxation times of holes in Ge hut wires
L. Vukušić, Charge Sensing and Spin Relaxation Times of Holes in Ge Hut Wires, Institute of Science and Technology Austria, 2018.
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L. Vukušić, Charge Sensing and Spin Relaxation Times of Holes in Ge Hut Wires, Institute of Science and Technology Austria, 2018.
2018 | Journal Article | IST-REx-ID: 327 |

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A. Michailidis, M. Žnidarič, M. Medvedyeva, D. Abanin, T. Prosen, Z. Papić, Physical Review B 97 (2018).
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A. Michailidis, M. Žnidarič, M. Medvedyeva, D. Abanin, T. Prosen, Z. Papić, Physical Review B 97 (2018).
2018 | Journal Article | IST-REx-ID: 29 |

Social environment affects the transcriptomic response to bacteria in ant queens
L. Viljakainen, J. Jurvansuu, I. Holmberg, T. Pamminger, S. Erler, S. Cremer, Ecology and Evolution 8 (2018) 11031–11070.
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L. Viljakainen, J. Jurvansuu, I. Holmberg, T. Pamminger, S. Erler, S. Cremer, Ecology and Evolution 8 (2018) 11031–11070.
2018 | Journal Article | IST-REx-ID: 806
Social immunity: Emergence and evolution of colony-level disease protection
S. Cremer, C. Pull, M. Fürst, Annual Review of Entomology 63 (2018) 105–123.
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S. Cremer, C. Pull, M. Fürst, Annual Review of Entomology 63 (2018) 105–123.
2018 | Conference Paper | IST-REx-ID: 140 |

Space-time interpolants
G. Frehse, M. Giacobbe, T.A. Henzinger, in:, Springer, 2018, pp. 468–486.
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G. Frehse, M. Giacobbe, T.A. Henzinger, in:, Springer, 2018, pp. 468–486.
2018 | Journal Article | IST-REx-ID: 161 |

Statistical mechanics for metabolic networks during steady state growth
D. De Martino, A.A. Mc, T. Bergmiller, C.C. Guet, G. Tkačik, Nature Communications 9 (2018).
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D. De Martino, A.A. Mc, T. Bergmiller, C.C. Guet, G. Tkačik, Nature Communications 9 (2018).
2018 | Journal Article | IST-REx-ID: 154 |

Stability of the 2+2 fermionic system with point interactions
T. Moser, R. Seiringer, Mathematical Physics Analysis and Geometry 21 (2018).
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T. Moser, R. Seiringer, Mathematical Physics Analysis and Geometry 21 (2018).
2018 | Journal Article | IST-REx-ID: 5787 |

Statistical theory of branching morphogenesis
E.B. Hannezo, B.D. Simons, Development Growth and Differentiation 60 (2018) 512–521.
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E.B. Hannezo, B.D. Simons, Development Growth and Differentiation 60 (2018) 512–521.
2018 | Journal Article | IST-REx-ID: 7 |

Social network plasticity decreases disease transmission in a eusocial insect
N. Stroeymeyt, A.V. Grasse, A. Crespi, D. Mersch, S. Cremer, L. Keller, Science 362 (2018) 941–945.
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N. Stroeymeyt, A.V. Grasse, A. Crespi, D. Mersch, S. Cremer, L. Keller, Science 362 (2018) 941–945.
2018 | Research Data | IST-REx-ID: 5587 |

Supporting materials "STATISTICAL MECHANICS FOR METABOLIC NETWORKS IN STEADY-STATE GROWTH"
D. De Martino, G. Tkačik, (2018).
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D. De Martino, G. Tkačik, (2018).
2018 | Research Data Reference | IST-REx-ID: 13055 |

Social network plasticity decreases disease transmission in a eusocial insect
N. Stroeymeyt, A.V. Grasse, A. Crespi, D. Mersch, S. Cremer, L. Keller, (2018).
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N. Stroeymeyt, A.V. Grasse, A. Crespi, D. Mersch, S. Cremer, L. Keller, (2018).
2018 | Conference Paper | IST-REx-ID: 297 |

Strategy representation by decision trees in reactive synthesis
T. Brázdil, K. Chatterjee, J. Kretinsky, V. Toman, in:, Springer, 2018, pp. 385–407.
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T. Brázdil, K. Chatterjee, J. Kretinsky, V. Toman, in:, Springer, 2018, pp. 385–407.
2018 | Conference Paper | IST-REx-ID: 141 |

Symbolic algorithms for graphs and Markov decision processes with fairness objectives
K. Chatterjee, M.H. Henzinger, V. Loitzenbauer, S. Oraee, V. Toman, in:, Springer, 2018, pp. 178–197.
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K. Chatterjee, M.H. Henzinger, V. Loitzenbauer, S. Oraee, V. Toman, in:, Springer, 2018, pp. 178–197.
2018 | Conference Paper | IST-REx-ID: 298 |

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J.F. Alwen, J. Blocki, K.Z. Pietrzak, in:, Springer, 2018, pp. 99–130.
2018 | Journal Article | IST-REx-ID: 36 |

Temperature-induced changes in the wheat phosphoproteome reveal temperature-regulated interconversion of phosphoforms
L. Vu, T. Zhu, I. Verstraeten, B. Van De Cotte, K. Gevaert, I. De Smet, Journal of Experimental Botany 69 (2018) 4609–4624.
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L. Vu, T. Zhu, I. Verstraeten, B. Van De Cotte, K. Gevaert, I. De Smet, Journal of Experimental Botany 69 (2018) 4609–4624.
2018 | Journal Article | IST-REx-ID: 326 |

Super resolution structural analysis of dendritic spines using three-dimensional structured illumination microscopy in cleared mouse brain slices
K. Sawada, R. Kawakami, R. Shigemoto, T. Nemoto, European Journal of Neuroscience 47 (2018) 1033–1042.
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K. Sawada, R. Kawakami, R. Shigemoto, T. Nemoto, European Journal of Neuroscience 47 (2018) 1033–1042.
2018 | Journal Article | IST-REx-ID: 5770 |

Structure and architecture of immature and mature murine leukemia virus capsids
K. Qu, B. Glass, M. Doležal, F.K. Schur, B. Murciano, A. Rein, M. Rumlová, T. Ruml, H.-G. Kräusslich, J.A.G. Briggs, Proceedings of the National Academy of Sciences 115 (2018) E11751–E11760.
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K. Qu, B. Glass, M. Doležal, F.K. Schur, B. Murciano, A. Rein, M. Rumlová, T. Ruml, H.-G. Kräusslich, J.A.G. Briggs, Proceedings of the National Academy of Sciences 115 (2018) E11751–E11760.
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Synthesis from component libraries with costs
G. Avni, O. Kupferman, Theoretical Computer Science 712 (2018) 50–72.
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G. Avni, O. Kupferman, Theoretical Computer Science 712 (2018) 50–72.
2018 | Journal Article | IST-REx-ID: 705
Super resolution microscopical localization of dopamine receptors 1 and 2 in rat hippocampal synaptosomes
A. Miklosi, G. Del Favero, T. Bulat, H. Höger, R. Shigemoto, D. Marko, G. Lubec, Molecular Neurobiology 55 (2018) 4857 – 4869.
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A. Miklosi, G. Del Favero, T. Bulat, H. Höger, R. Shigemoto, D. Marko, G. Lubec, Molecular Neurobiology 55 (2018) 4857 – 4869.
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The Chara genome: Secondary complexity and implications for plant terrestrialization
Nishiyama T, Sakayama H, De Vries J, Buschmann H, Saint Marcoux D, Ullrich K, Haas F, Vanderstraeten L, Becker D, Lang D, Vosolsobě S, Rombauts S, Wilhelmsson P, Janitza P, Kern R, Heyl A, Rümpler F, Calderón Villalobos L, Clay J, Skokan R, Toyoda A, Suzuki Y, Kagoshima H, Schijlen E, Tajeshwar N, Catarino B, Hetherington A, Saltykova A, Bonnot C, Breuninger H, Symeonidi A, Radhakrishnan G, Van Nieuwerburgh F, Deforce D, Chang C, Karol K, Hedrich R, Ulvskov P, Glöckner G, Delwiche C, Petrášek J, Van De Peer Y, Friml J, Beilby M, Dolan L, Kohara Y, Sugano S, Fujiyama A, Delaux PM, Quint M, Theissen G, Hagemann M, Harholt J, Dunand C, Zachgo S, Langdale J, Maumus F, Van Der Straeten D, Gould SB, Rensing S. 2018. The Chara genome: Secondary complexity and implications for plant terrestrialization. Cell. 174(2), 448–464.e24.
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Nishiyama T, Sakayama H, De Vries J, Buschmann H, Saint Marcoux D, Ullrich K, Haas F, Vanderstraeten L, Becker D, Lang D, Vosolsobě S, Rombauts S, Wilhelmsson P, Janitza P, Kern R, Heyl A, Rümpler F, Calderón Villalobos L, Clay J, Skokan R, Toyoda A, Suzuki Y, Kagoshima H, Schijlen E, Tajeshwar N, Catarino B, Hetherington A, Saltykova A, Bonnot C, Breuninger H, Symeonidi A, Radhakrishnan G, Van Nieuwerburgh F, Deforce D, Chang C, Karol K, Hedrich R, Ulvskov P, Glöckner G, Delwiche C, Petrášek J, Van De Peer Y, Friml J, Beilby M, Dolan L, Kohara Y, Sugano S, Fujiyama A, Delaux PM, Quint M, Theissen G, Hagemann M, Harholt J, Dunand C, Zachgo S, Langdale J, Maumus F, Van Der Straeten D, Gould SB, Rensing S. 2018. The Chara genome: Secondary complexity and implications for plant terrestrialization. Cell. 174(2), 448–464.e24.
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The cyclin‐dependent kinase G group defines a thermo‐sensitive alternative splicing circuit modulating the expression of Arabidopsis ATU 2AF 65A
N. Cavallari, C. Nibau, A. Fuchs, D. Dadarou, A. Barta, J. Doonan, The Plant Journal 94 (2018) 1010–1022.
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N. Cavallari, C. Nibau, A. Fuchs, D. Dadarou, A. Barta, J. Doonan, The Plant Journal 94 (2018) 1010–1022.
2018 | Conference Paper | IST-REx-ID: 156 |

The compound interest in relaxing punctuality
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T. Ferrere, in:, Springer, 2018, pp. 147–164.
2018 | Journal Article | IST-REx-ID: 104 |

The core effector Cce1 is required for early infection of maize by Ustilago maydis
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D. Seitner, S. Uhse, M.C. Gallei, A. Djamei, Molecular Plant Pathology 19 (2018) 2277–2287.
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The consequences of an introgression event
N.H. Barton, Molecular Ecology 27 (2018) 4973–4975.
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N.H. Barton, Molecular Ecology 27 (2018) 4973–4975.
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The cell sets the tone
J.H. Alanko, M.K. Sixt, ELife 7 (2018).
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J.H. Alanko, M.K. Sixt, ELife 7 (2018).
2018 | Journal Article | IST-REx-ID: 139 |

The divergence history of European blue mussel species reconstructed from Approximate Bayesian Computation: The effects of sequencing techniques and sampling strategies
C. Fraisse, C. Roux, P. Gagnaire, J. Romiguier, N. Faivre, J. Welch, N. Bierne, PeerJ 2018 (2018).
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C. Fraisse, C. Roux, P. Gagnaire, J. Romiguier, N. Faivre, J. Welch, N. Bierne, PeerJ 2018 (2018).
2018 | Journal Article | IST-REx-ID: 147 |

The inhibitor Endosidin 4 targets SEC7 domain-type ARF GTPase exchange factors and interferes with sub cellular trafficking in eukaryotes
U. Kania, T. Nodzyński, Q. Lu, G.R. Hicks, W. Nerinckx, K. Mishev, F. Peurois, J. Cherfils, R.R.M. De, P. Grones, S. Robert, E. Russinova, J. Friml, The Plant Cell 30 (2018) 2553–2572.
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U. Kania, T. Nodzyński, Q. Lu, G.R. Hicks, W. Nerinckx, K. Mishev, F. Peurois, J. Cherfils, R.R.M. De, P. Grones, S. Robert, E. Russinova, J. Friml, The Plant Cell 30 (2018) 2553–2572.
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The dynamics of root cap sloughing in Arabidopsis is regulated by peptide signalling
C.L. Shi, D. von Wangenheim, U. Herrmann, M. Wildhagen, I. Kulik, A. Kopf, T. Ishida, V. Olsson, M.K. Anker, M. Albert, M.A. Butenko, G. Felix, S. Sawa, M. Claassen, J. Friml, R.B. Aalen, Nature Plants 4 (2018) 596–604.
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C.L. Shi, D. von Wangenheim, U. Herrmann, M. Wildhagen, I. Kulik, A. Kopf, T. Ishida, V. Olsson, M.K. Anker, M. Albert, M.A. Butenko, G. Felix, S. Sawa, M. Claassen, J. Friml, R.B. Aalen, Nature Plants 4 (2018) 596–604.
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The signal-burying game can explain why we obscure positive traits and good deeds
M. Hoffman, C. Hilbe, M. Nowak, Nature Human Behaviour 2 (2018) 397–404.
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M. Hoffman, C. Hilbe, M. Nowak, Nature Human Behaviour 2 (2018) 397–404.
2018 | Journal Article | IST-REx-ID: 455 |

The Dirac–Frenkel principle for reduced density matrices and the Bogoliubov–de Gennes equations
N.P. Benedikter, J. Sok, J. Solovej, Annales Henri Poincare 19 (2018) 1167–1214.
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N.P. Benedikter, J. Sok, J. Solovej, Annales Henri Poincare 19 (2018) 1167–1214.
2018 | Journal Article | IST-REx-ID: 314 |

The science of living matter for tomorrow
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G. Bauer, N. Fakhri, A. Kicheva, J. Kondev, K. Kruse, H. Noji, D. Riveline, T. Saunders, M. Thatta, E. Wieschaus, Cell Systems 6 (2018) 400–402.
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The spread of an inversion with migration and selection
B. Charlesworth, N.H. Barton, Genetics 208 (2018) 377–382.
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B. Charlesworth, N.H. Barton, Genetics 208 (2018) 377–382.
2018 | Journal Article | IST-REx-ID: 446 |

The ionization conjecture in Thomas–Fermi–Dirac–von Weizsäcker theory
R. Frank, P. Nam, H. Van Den Bosch, Communications on Pure and Applied Mathematics 71 (2018) 577–614.
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R. Frank, P. Nam, H. Van Den Bosch, Communications on Pure and Applied Mathematics 71 (2018) 577–614.
2018 | Journal Article | IST-REx-ID: 430 |

Tread lightly interpreting polygenic tests of selection
J. Novembre, N.H. Barton, Genetics 208 (2018) 1351–1355.
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J. Novembre, N.H. Barton, Genetics 208 (2018) 1351–1355.
2018 | Journal Article | IST-REx-ID: 199 |

Tissue specificity and dynamics of sex biased gene expression in a common frog population with differentiated, yet homomorphic, sex chromosomes
W. Ma, P. Veltsos, M.A. Toups, N. Rodrigues, R. Sermier, D. Jeffries, N. Perrin, Genes 9 (2018).
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W. Ma, P. Veltsos, M.A. Toups, N. Rodrigues, R. Sermier, D. Jeffries, N. Perrin, Genes 9 (2018).
2018 | Journal Article | IST-REx-ID: 70 |

Transition to shocks in TASEP and decoupling of last passage times
P. Nejjar, Latin American Journal of Probability and Mathematical Statistics 15 (2018) 1311–1334.
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P. Nejjar, Latin American Journal of Probability and Mathematical Statistics 15 (2018) 1311–1334.
2018 | Journal Article | IST-REx-ID: 543 |

Toward a unified theory of efficient, predictive, and sparse coding
M.J. Chalk, O. Marre, G. Tkačik, PNAS 115 (2018) 186–191.
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M.J. Chalk, O. Marre, G. Tkačik, PNAS 115 (2018) 186–191.
2018 | Journal Article | IST-REx-ID: 421 |

Theory of eppithelial cell shape transitions induced by mechanoactive chemical gradients
K. Dasbiswas, E.B. Hannezo, N. Gov, Biophysical Journal 114 (2018) 968–977.
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K. Dasbiswas, E.B. Hannezo, N. Gov, Biophysical Journal 114 (2018) 968–977.
2018 | Journal Article | IST-REx-ID: 134 |

Water surface wavelets
S. Jeschke, T. Skrivan, M. Mueller Fischer, N. Chentanez, M. Macklin, C. Wojtan, ACM Transactions on Graphics 37 (2018).
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S. Jeschke, T. Skrivan, M. Mueller Fischer, N. Chentanez, M. Macklin, C. Wojtan, ACM Transactions on Graphics 37 (2018).