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71 Publications


2024 | Journal Article | IST-REx-ID: 15084 | OA
GABAB receptors induce phasic release from medial habenula terminals through activity-dependent recruitment of release-ready vesicles
P. Koppensteiner, P. Bhandari, C. Önal, C. Borges Merjane, E. Le Monnier, U. Roy, Y. Nakamura, T. Sadakata, M. Sanbo, M. Hirabayashi, J. Rhee, N. Brose, P.M. Jonas, R. Shigemoto, Proceedings of the National Academy of Sciences 121 (2024).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2024 | Journal Article | IST-REx-ID: 15083 | OA
Efficiency and resilience of cooperation in asymmetric social dilemmas
V. Hübner, M. Staab, C. Hilbe, K. Chatterjee, M. Kleshnina, Proceedings of the National Academy of Sciences 121 (2024).
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2024 | Journal Article | IST-REx-ID: 14478 | OA
Frequent horizontal chromosome transfer between asexual fungal insect pathogens
M. Habig, A.V. Grasse, J. Müller, E.H. Stukenbrock, H. Leitner, S. Cremer, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2024 | Journal Article | IST-REx-ID: 15116 | OA
Elucidating the role of water in collagen self-assembly by isotopically modulating collagen hydration
G. Giubertoni, L. Feng, K. Klein, G. Giannetti, L. Rutten, Y. Choi, A. Van Der Net, G. Castro-Linares, F. Caporaletti, D. Micha, J. Hunger, A. Deblais, D. Bonn, N. Sommerdijk, A. Šarić, I.M. Ilie, G.H. Koenderink, S. Woutersen, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).
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2023 | Journal Article | IST-REx-ID: 14666 | OA
Metabolically regulated spiking could serve neuronal energy homeostasis and protect from reactive oxygen species
C. Chintaluri, T.P. Vogels, Proceedings of the National Academy of Sciences of the United States of America 120 (2023).
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2023 | Journal Article | IST-REx-ID: 13201 | OA
The nitrate transporter NRT2.1 directly antagonizes PIN7-mediated auxin transport for root growth adaptation
Y. Wang, Z. Yuan, J. Wang, H. Xiao, L. Wan, L. Li, Y. Guo, Z. Gong, J. Friml, J. Zhang, Proceedings of the National Academy of Sciences of the United States of America 120 (2023).
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2022 | Journal Article | IST-REx-ID: 11702 | OA
The "New Synthesis"
N.H. Barton, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
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2022 | Journal Article | IST-REx-ID: 12577
Warming-induced monsoon precipitation phase change intensifies glacier mass loss in the southeastern Tibetan Plateau
A. Jouberton, T.E. Shaw, E. Miles, M. McCarthy, S. Fugger, S. Ren, A. Dehecq, W. Yang, F. Pellicciotti, PNAS 119 (2022).
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2022 | Journal Article | IST-REx-ID: 11723 | OA
RALF1 peptide triggers biphasic root growth inhibition upstream of auxin biosynthesis
L. Li, H. Chen, S.S. Alotaibi, A. Pěnčík, M. Adamowski, O. Novák, J. Friml, Proceedings of the National Academy of Sciences 119 (2022).
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2022 | Journal Article | IST-REx-ID: 11841 | OA
Adsorption free energy predicts amyloid protein nucleation rates
Z. Toprakcioglu, A. Kamada, T.C.T. Michaels, M. Xie, J. Krausser, J. Wei, A. Šarić, M. Vendruscolo, T.P.J. Knowles, Proceedings of the National Academy of Sciences of the United States of America 119 (2022).
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12081 | OA
Accumulation and maintenance of information in evolution
M. Hledik, N.H. Barton, G. Tkačik, Proceedings of the National Academy of Sciences 119 (2022).
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2021 | Journal Article | IST-REx-ID: 12667 | OA
Microscopic origins of the crystallographically preferred growth in evaporation-induced colloidal crystals
L. Li, C.P. Goodrich, H. Yang, K.R. Phillips, Z. Jia, H. Chen, L. Wang, J. Zhong, A. Liu, J. Lu, J. Shuai, M.P. Brenner, F. Spaepen, J. Aizenberg, PNAS 118 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 9257 | OA
Designing self-assembling kinetics with differentiable statistical physics models
C.P. Goodrich, E.M. King, S.S. Schoenholz, E.D. Cubuk, M.P. Brenner, Proceedings of the National Academy of Sciences 118 (2021).
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2021 | Journal Article | IST-REx-ID: 9877 | OA
Divergence among rice cultivars reveals roles for transposition and epimutation in ongoing evolution of genomic imprinting
J.A. Rodrigues, P.-H. Hsieh, D. Ruan, T. Nishimura, M.K. Sharma, R. Sharma, X. Ye, N.D. Nguyen, S. Nijjar, P.C. Ronald, R.L. Fischer, D. Zilberman, Proceedings of the National Academy of Sciences 118 (2021).
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2021 | Journal Article | IST-REx-ID: 10299 | OA
Experimental observation of the origin and structure of elastoinertial turbulence
G.H. Choueiri, J.M. Lopez Alonso, A. Varshney, S. Sankar, B. Hof, Proceedings of the National Academy of Sciences 118 (2021).
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2021 | Journal Article | IST-REx-ID: 9301 | OA
In situ small-angle X-ray scattering reveals solution phase discharge of Li–O2 batteries with weakly solvating electrolytes
C. Prehal, A. Samojlov, M. Nachtnebel, L. Lovicar, M. Kriechbaum, H. Amenitsch, S.A. Freunberger, Proceedings of the National Academy of Sciences 118 (2021).
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2020 | Journal Article | IST-REx-ID: 10336 | OA
Physical mechanisms of amyloid nucleation on fluid membranes
J. Krausser, T.P.J. Knowles, A. Šarić, Proceedings of the National Academy of Sciences 117 (2020) 33090–33098.
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2020 | Journal Article | IST-REx-ID: 10347 | OA
Thermodynamic and kinetic design principles for amyloid-aggregation inhibitors
T.C.T. Michaels, A. Šarić, G. Meisl, G.T. Heller, S. Curk, P. Arosio, S. Linse, C.M. Dobson, M. Vendruscolo, T.P.J. Knowles, Proceedings of the National Academy of Sciences 117 (2020) 24251–24257.
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2020 | Journal Article | IST-REx-ID: 12188 | OA
The Arabidopsis epigenetic regulator ICU11 as an accessory protein of polycomb repressive complex 2
R.H. Bloomer, C.E. Hutchison, I. Bäurle, J. Walker, X. Fang, P. Perera, C.N. Velanis, S. Gümüs, C. Spanos, J. Rappsilber, X. Feng, J. Goodrich, C. Dean, Proceedings of the National Academy of Sciences 117 (2020) 16660–16666.
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2020 | Journal Article | IST-REx-ID: 7580 | OA
Stochastic activation and bistability in a Rab GTPase regulatory network
U. Bezeljak, H. Loya, B.M. Kaczmarek, T.E. Saunders, M. Loose, Proceedings of the National Academy of Sciences 117 (2020) 6504–6549.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS
 

2020 | Journal Article | IST-REx-ID: 15061 | OA
Calcium modulates the domain flexibility and function of an α-actinin similar to the ancestral α-actinin
N. Pinotsis, K. Zielinska, M. Babuta, J.L. Arolas, J. Kostan, M.B. Khan, C. Schreiner, A.P. Testa Salmazo, L. Ciccarelli, M. Puchinger, E.A. Gkougkoulia, E. de A. Ribeiro, T.C. Marlovits, A. Bhattacharya, K. Djinovic-Carugo, Proceedings of the National Academy of Sciences 117 (2020) 22101–22112.
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2020 | Journal Article | IST-REx-ID: 8002 | OA
Wounding-induced changes in cellular pressure and localized auxin signalling spatially coordinate restorative divisions in roots
L. Hörmayer, J.C. Montesinos López, P. Marhavá, E. Benková, S. Yoshida, J. Friml, Proceedings of the National Academy of Sciences 117 (2020).
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2019 | Journal Article | IST-REx-ID: 9460 | OA
DNA demethylation by ROS1a in rice vegetative cells promotes methylation in sperm
M.Y. Kim, A. Ono, S. Scholten, T. Kinoshita, D. Zilberman, T. Okamoto, R.L. Fischer, Proceedings of the National Academy of Sciences 116 (2019) 9652–9657.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 9689 | OA
Ab initio thermodynamics of liquid and solid water
B. Cheng, E.A. Engel, J. Behler, C. Dellago, M. Ceriotti, Proceedings of the National Academy of Sciences 116 (2019) 1110–1115.
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2019 | Journal Article | IST-REx-ID: 14001 | OA
Real-time probing of chirality during a chemical reaction
D.R. Baykusheva, D. Zindel, V. Svoboda, E. Bommeli, M. Ochsner, A. Tehlar, H.J. Wörner, Proceedings of the National Academy of Sciences 116 (2019) 23923–23929.
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2019 | Journal Article | IST-REx-ID: 6999 | OA
Salicylic acid-mediated plasmodesmal closure via Remorin-dependent lipid organization
D. Huang, Y. Sun, Z. Ma, M. Ke, Y. Cui, Z. Chen, C. Chen, C. Ji, T. Tran, L. Yang, S. Lam, Y. Han, G. Shu, J. Friml, Y. Miao, L. Jiang, X. Chen, Proceedings of the National Academy of Sciences of the United States of America 116 (2019) 21274–21284.
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2018 | Journal Article | IST-REx-ID: 6109 | OA
Genetic dissection of neuropeptide cell biology at high and low activity in a defined sensory neuron
P. Laurent, Q. Ch’ng, M. Jospin, C. Chen, R. Lorenzo, M. de Bono, Proceedings of the National Academy of Sciences 115 (2018) E6890–E6899.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2018 | Journal Article | IST-REx-ID: 7724
Evidence of directional and stabilizing selection in contemporary humans
J.S. Sanjak, J. Sidorenko, M.R. Robinson, K.R. Thornton, P.M. Visscher, Proceedings of the National Academy of Sciences 115 (2018) 151–156.
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2018 | Journal Article | IST-REx-ID: 9135 | OA
Acceleration of tropical cyclogenesis by self-aggregation feedbacks
C.J. Muller, D.M. Romps, Proceedings of the National Academy of Sciences 115 (2018) 2930–2935.
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2018 | Journal Article | IST-REx-ID: 9471 | OA
FACT complex is required for DNA demethylation at heterochromatin during reproduction in Arabidopsis
J.M. Frost, M.Y. Kim, G.T. Park, P.-H. Hsieh, M. Nakamura, S.J.H. Lin, H. Yoo, J. Choi, Y. Ikeda, T. Kinoshita, Y. Choi, D. Zilberman, R.L. Fischer, Proceedings of the National Academy of Sciences 115 (2018) E4720–E4729.
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2018 | Journal Article | IST-REx-ID: 12607 | OA
Aspect controls the survival of ice cliffs on debris-covered glaciers
P. Buri, F. Pellicciotti, PNAS 115 (2018) 4369–4374.
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2018 | Journal Article | IST-REx-ID: 13376 | OA
Reversible photoswitching of encapsulated azobenzenes in water
D. Samanta, J. Gemen, Z. Chu, Y. Diskin-Posner, L.J.W. Shimon, R. Klajn, Proceedings of the National Academy of Sciences 115 (2018) 9379–9384.
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2018 | Journal Article | IST-REx-ID: 6010 | OA
“Shepherd’s crook” neurons drive and synchronize the enhancing and suppressive mechanisms of the midbrain stimulus selection network
F. Garrido-Charad, T.A. Vega Zuniga, C. Gutiérrez-Ibáñez, P. Fernandez, L. López-Jury, C. González-Cabrera, H.J. Karten, H. Luksch, G.J. Marín, Proceedings of the National Academy of Sciences 115 (2018) E7615–E7623.
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2017 | Journal Article | IST-REx-ID: 10373 | OA
Numerical evidence for thermally induced monopoles
P. Wirnsberger, D. Fijan, R.A. Lightwood, A. Šarić, C. Dellago, D. Frenkel, Proceedings of the National Academy of Sciences 114 (2017) 4911–4914.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC | arXiv
 

2017 | Journal Article | IST-REx-ID: 6115 | OA
Memory of recent oxygen experience switches pheromone valence inCaenorhabditis elegans
L.A. Fenk, M. de Bono, Proceedings of the National Academy of Sciences 114 (2017) 4195–4200.
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2017 | Journal Article | IST-REx-ID: 6113 | OA
Modulation of sensory information processing by a neuroglobin in Caenorhabditis elegans
S. Oda, Y. Toyoshima, M. de Bono, Proceedings of the National Academy of Sciences 114 (2017) E4658–E4665.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2017 | Journal Article | IST-REx-ID: 7729
Detection and quantification of inbreeding depression for complex traits from SNP data
L. Yengo, Z. Zhu, N.R. Wray, B.S. Weir, J. Yang, M.R. Robinson, P.M. Visscher, Proceedings of the National Academy of Sciences 114 (2017) 8602–8607.
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2017 | Journal Article | IST-REx-ID: 7757
Designing allostery-inspired response in mechanical networks
J.W. Rocks, N. Pashine, I. Bischofberger, C.P. Goodrich, A.J. Liu, S.R. Nagel, Proceedings of the National Academy of Sciences 114 (2017) 2520–2525.
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2017 | Journal Article | IST-REx-ID: 7758
Using active colloids as machines to weave and braid on the micrometer scale
C.P. Goodrich, M.P. Brenner, Proceedings of the National Academy of Sciences 114 (2017) 257–262.
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2017 | Journal Article | IST-REx-ID: 8018 | OA
Inhibitory engrams in perception and memory
H.C. Barron, T.P. Vogels, T.E. Behrens, M. Ramaswami, Proceedings of the National Academy of Sciences 114 (2017) 6666–6674.
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2017 | Journal Article | IST-REx-ID: 15157 | OA
Formation of a repressive complex in the mammalian circadian clock is mediated by the secondary pocket of CRY1
A.K. Michael, J.L. Fribourgh, Y. Chelliah, C.R. Sandate, G.L. Hura, D. Schneidman-Duhovny, S.M. Tripathi, J.S. Takahashi, C.L. Partch, Proceedings of the National Academy of Sciences 114 (2017) 1560–1565.
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2016 | Journal Article | IST-REx-ID: 7760
Scaling ansatz for the jamming transition
C.P. Goodrich, A.J. Liu, J.P. Sethna, Proceedings of the National Academy of Sciences 113 (2016) 9745–9750.
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2016 | Journal Article | IST-REx-ID: 8452
A ring-shaped conduit connects the mother cell and forespore during sporulation in Bacillus subtilis
C.D.A. Rodrigues, X. Henry, E. Neumann, V. Kurauskas, L. Bellard, Y. Fichou, P. Schanda, G. Schoehn, D.Z. Rudner, C. Morlot, Proceedings of the National Academy of Sciences 113 (2016) 11585–11590.
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2016 | Journal Article | IST-REx-ID: 12618 | OA
Contrasting climate change impact on river flows from high-altitude catchments in the Himalayan and Andes Mountains
S. Ragettli, W.W. Immerzeel, F. Pellicciotti, PNAS 113 (2016) 9222–9227.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2016 | Journal Article | IST-REx-ID: 9477 | OA
DNA demethylation is initiated in the central cells of Arabidopsis and rice
K. Park, M.Y. Kim, M. Vickers, J.-S. Park, Y. Hyun, T. Okamoto, D. Zilberman, R.L. Fischer, X. Feng, Y. Choi, S. Scholten, Proceedings of the National Academy of Sciences 113 (2016) 15138–15143.
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2016 | Journal Article | IST-REx-ID: 9473 | OA
Arabidopsis male sexual lineage exhibits more robust maintenance of CG methylation than somatic tissues
P.-H. Hsieh, S. He, T. Buttress, H. Gao, M. Couchman, R.L. Fischer, D. Zilberman, X. Feng, Proceedings of the National Academy of Sciences 113 (2016) 15132–15137.
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2016 | Journal Article | IST-REx-ID: 14304
Design of a molecular support for cryo-EM structure determination
T.G. Martin, T.A.M. Bharat, A.C. Joerger, X. Bai, F.M. Praetorius, A.R. Fersht, H. Dietz, S.H.W. Scheres, PNAS 113 (2016) E7456–E7463.
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2015 | Journal Article | IST-REx-ID: 6118 | OA
Environmental CO2 inhibits Caenorhabditis elegans egg-laying by modulating olfactory neurons and evokes widespread changes in neural activity
L.A. Fenk, M. de Bono, Proceedings of the National Academy of Sciences 112 (2015) E3525–E3534.
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2014 | Journal Article | IST-REx-ID: 10382 | OA
Crucial role of nonspecific interactions in amyloid nucleation
A. Šarić, Y.C. Chebaro, T.P.J. Knowles, D. Frenkel, Proceedings of the National Academy of Sciences 111 (2014) 17869–17874.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC | arXiv
 

2014 | Journal Article | IST-REx-ID: 8021 | OA
Activity-dependent dendritic spine neck changes are correlated with synaptic strength
R. Araya, T.P. Vogels, R. Yuste, Proceedings of the National Academy of Sciences 111 (2014) E2895–E2904.
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