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70 Publications


2024 | Journal Article | IST-REx-ID: 14850 | OA
Too much information? Males convey parasite levels using more signal modalities than females utilise
A. Pal, M. Joshi, M. Thaker, Journal of Experimental Biology 227 (2024).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2024 | Research Data | IST-REx-ID: 14705 | OA [Published Version] View | Files available | DOI
 

2024 | Thesis | IST-REx-ID: 15020 | OA
Genetic information and biological optimization
M. Hledik, Genetic Information and Biological Optimization, Institute of Science and Technology Austria, 2024.
[Published Version] View | Files available | DOI
 

2023 | Journal Article | IST-REx-ID: 12159 | OA
On the origin and structure of haplotype blocks
D. Shipilina, A. Pal, S. Stankowski, Y.F. Chan, N.H. Barton, Molecular Ecology 32 (2023) 1441–1457.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2023 | Journal Article | IST-REx-ID: 12521 | OA
Slower-X: Reduced efficiency of selection in the early stages of X chromosome evolution
A. Mrnjavac, K. Khudiakova, N.H. Barton, B. Vicoso, Evolution Letters 7 (2023).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2023 | Journal Article | IST-REx-ID: 14785 | OA
Role of natural transformation in the evolution of small cryptic plasmids in Synechocystis sp. PCC 6803
F. Nies, T. Wein, D.M. Hanke, B.L. Springstein, J. Alcorta, C. Taubenheim, T. Dagan, Environmental Microbiology Reports 15 (2023) 656–668.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2023 | Journal Article | IST-REx-ID: 14787 | OA
Integrating top‐down and bottom‐up approaches to understand the genetic architecture of speciation across a monkeyflower hybrid zone
S. Stankowski, M.A. Chase, H. McIntosh, M.A. Streisfeld, Molecular Ecology 32 (2023) 2041–2054.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | PubMed | Europe PMC
 

2023 | Journal Article | IST-REx-ID: 14613 | OA
The scorpionfly (Panorpa cognata) genome highlights conserved and derived features of the peculiar dipteran X chromosome
C. Lasne, M.N. Elkrewi, M.A. Toups, L.A. Layana Franco, A. Macon, B. Vicoso, Molecular Biology and Evolution 40 (2023).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 11488 | OA
The MUSE eXtremely Deep Field: Individual detections of Lyα haloes around rest-frame UV-selected galaxies at z ≃ 2.9–4.4
H. Kusakabe, A. Verhamme, J. Blaizot, T. Garel, L. Wisotzki, F. Leclercq, R. Bacon, J. Schaye, S.G. Gallego, J. Kerutt, J.J. Matthee, M. Maseda, T. Nanayakkara, R. Pelló, J. Richard, L. Tresse, T. Urrutia, E. Vitte, Astronomy & Astrophysics 660 (2022).
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 11497 | OA
Equivalent widths of Lyman α emitters in MUSE-Wide and MUSE-Deep
J. Kerutt, L. Wisotzki, A. Verhamme, K.B. Schmidt, F. Leclercq, E.C. Herenz, T. Urrutia, T. Garel, T. Hashimoto, M. Maseda, J.J. Matthee, H. Kusakabe, J. Schaye, J. Richard, B. Guiderdoni, V. Mauerhofer, T. Nanayakkara, E. Vitte, Astronomy & Astrophysics 659 (2022).
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2022 | Journal Article | IST-REx-ID: 10604 | OA [Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12152 | OA
Modelling membrane reshaping by staged polymerization of ESCRT-III filaments
X. Jiang, L. Harker-Kirschneck, C.E. Vanhille-Campos, A.-K. Pfitzner, E. Lominadze, A. Roux, B. Baum, A. Šarić, PLOS Computational Biology 18 (2022).
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12166 | OA
Professor Kerstin Johannesson–winner of the 2022 Molecular Ecology Prize
A.M. Westram, R. Butlin, Molecular Ecology 32 (2022) 26–29.
[Published Version] View | DOI | Download Published Version (ext.) | WoS
 

2022 | Journal Article | IST-REx-ID: 12234 | OA
Digest: On the origin of a possible hybrid species
S. Stankowski, Evolution 76 (2022) 2784–2785.
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12247 | OA
Genetic architecture of repeated phenotypic divergence in Littorina saxatilis evolution
E.L. Koch, M. Ravinet, A.M. Westram, K. Johannesson, R.K. Butlin, Evolution 76 (2022) 2332–2346.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 12264 | OA
What is reproductive isolation?
A.M. Westram, S. Stankowski, P. Surendranadh, N.H. Barton, Journal of Evolutionary Biology 35 (2022) 1143–1164.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2022 | Journal Article | IST-REx-ID: 12265 | OA
Reproductive isolation, speciation, and the value of disagreement: A reply to the commentaries on ‘What is reproductive isolation?’
A.M. Westram, S. Stankowski, P. Surendranadh, N.H. Barton, Journal of Evolutionary Biology 35 (2022) 1200–1205.
[Published Version] View | Files available | DOI | WoS
 

2022 | Journal Article | IST-REx-ID: 12280 | OA
Direct reciprocity between individuals that use different strategy spaces
L. Schmid, C. Hilbe, K. Chatterjee, M. Nowak, PLOS Computational Biology 18 (2022).
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 11524 | OA
The evolution of the UV luminosity and stellar mass functions of Lyman-α emitters from z ∼ 2 to z ∼ 6
S. Santos, D. Sobral, J. Butterworth, A. Paulino-Afonso, B. Ribeiro, E. da Cunha, J. Calhau, A.A. Khostovan, J.J. Matthee, P. Arrabal Haro, Monthly Notices of the Royal Astronomical Society 505 (2021) 1117–1134.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 11585 | OA
Differences in galaxy colours are not just about the mass
J.J. Matthee, Nature Astronomy 5 (2021) 984–985.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 11609 | OA
Horizontal shear instabilities in rotating stellar radiation zones: II. Effects of the full Coriolis acceleration
J. Park, V. Prat, S. Mathis, L.A. Bugnet, Astronomy & Astrophysics 646 (2021).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 11605 | OA
Magnetic signatures on mixed-mode frequencies: I. An axisymmetric fossil field inside the core of red giants
L.A. Bugnet, V. Prat, S. Mathis, A. Astoul, K. Augustson, R.A. García, S. Mathur, L. Amard, C. Neiner, Astronomy & Astrophysics 650 (2021).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2021 | Journal Article | IST-REx-ID: 10568 | OA
Pipefish locally adapted to low salinity in the Baltic Sea retain phenotypic plasticity to cope with ancestral salinity levels
H. Goehlich, L. Sartoris, K.-S. Wagner, C.C. Wendling, O. Roth, Frontiers in Ecology and Evolution 9 (2021).
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9252 | OA
Polygenic local adaptation in metapopulations: A stochastic eco‐evolutionary model
E. Szep, H. Sachdeva, N.H. Barton, Evolution 75 (2021) 1030–1045.
[Published Version] View | Files available | DOI | WoS
 

2021 | Journal Article | IST-REx-ID: 9374 | OA
Homage to Felsenstein 1981, or why are there so few/many species?
R.K. Butlin, M.R. Servedio, C.M. Smadja, C. Bank, N.H. Barton, S.M. Flaxman, T. Giraud, R. Hopkins, E.L. Larson, M.E. Maan, J. Meier, R. Merrill, M.A.F. Noor, D. Ortiz‐Barrientos, A. Qvarnström, Evolution 75 (2021) 978–988.
[Published Version] View | DOI | Download Published Version (ext.) | WoS
 

2021 | Journal Article | IST-REx-ID: 10838 | OA
Using replicate hybrid zones to understand the genomic basis of adaptive divergence
A.M. Westram, R. Faria, K. Johannesson, R. Butlin, Molecular Ecology 30 (2021) 3797–3814.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 

2021 | Journal Article | IST-REx-ID: 15272 | OA
The CATP-8/P5A-type ATPase functions in multiple pathways during neuronal patterning
L.T.H. Tang, M. Trivedi, J. Freund, C.J. Salazar, M. Rahman, N. Ramirez, G. Lee, Y. Wang, B.D. Grant, H.E. Bülow, PLOS Genetics 17 (2021).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 11503 | OA
The MUSE Hubble Ultra Deep Field Survey: XIV. Evolution of the Lyα emitter fraction from z = 3 to z = 6
Kusakabe H, Blaizot J, Garel T, Verhamme A, Bacon R, Richard J, Hashimoto T, Inami H, Conseil S, Guiderdoni B, Drake AB, Christian Herenz E, Schaye J, Oesch P, Matthee JJ, Anna Marino R, Borello Schmidt K, Pelló R, Maseda M, Leclercq F, Kerutt J, Mahler G. 2020. The MUSE Hubble Ultra Deep Field Survey: XIV. Evolution of the Lyα emitter fraction from z = 3 to z = 6. Astronomy & Astrophysics. 638, A12.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 11504 | OA
The MUSE Hubble Ultra Deep field survey: XIII. Spatially resolved spectral properties of Lyman α haloes around star-forming galaxies at z > 3
Leclercq F, Bacon R, Verhamme A, Garel T, Blaizot J, Brinchmann J, Cantalupo S, Claeyssens A, Conseil S, Contini T, Hashimoto T, Herenz EC, Kusakabe H, Marino RA, Maseda M, Matthee JJ, Mitchell P, Pezzulli G, Richard J, Schmidt KB, Wisotzki L. 2020. The MUSE Hubble Ultra Deep field survey: XIII. Spatially resolved spectral properties of Lyman α haloes around star-forming galaxies at z > 3. Astronomy & Astrophysics. 635, A82.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 11501 | OA
The MUSE Hubble Ultra Deep Field Survey: XV. The mean rest-UV spectra of Lyα emitters at z > 3
Feltre A, Maseda MV, Bacon R, Pradeep J, Leclercq F, Kusakabe H, Wisotzki L, Hashimoto T, Schmidt KB, Blaizot J, Brinchmann J, Boogaard L, Cantalupo S, Carton D, Inami H, Kollatschny W, Marino RA, Matthee JJ, Nanayakkara T, Richard J, Schaye J, Tresse L, Urrutia T, Verhamme A, Weilbacher PM. 2020. The MUSE Hubble Ultra Deep Field Survey: XV. The mean rest-UV spectra of Lyα emitters at z > 3. Astronomy & Astrophysics. 641, A118.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 11529 | OA
The nature of CR7 revealed with MUSE: A young starburst powering extended Ly α emission at z = 6.6
J.J. Matthee, G. Pezzulli, R. Mackenzie, S. Cantalupo, H. Kusakabe, F. Leclercq, D. Sobral, J. Richard, L. Wisotzki, S. Lilly, L. Boogaard, R. Marino, M. Maseda, T. Nanayakkara, Monthly Notices of the Royal Astronomical Society 498 (2020) 3043–3059.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 11533 | OA
The evolution of rest-frame UV properties, Ly α EWs, and the SFR–stellar mass relation at z ∼ 2–6 for SC4K LAEs
S. Santos, D. Sobral, J.J. Matthee, J. Calhau, E. da Cunha, B. Ribeiro, A. Paulino-Afonso, P. Arrabal Haro, J. Butterworth, Monthly Notices of the Royal Astronomical Society 493 (2020) 141–160.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 11534 | OA
Resolved Lyman-α properties of a luminous Lyman-break galaxy in a large ionized bubble at z = 6.53
J.J. Matthee, D. Sobral, M. Gronke, G. Pezzulli, S. Cantalupo, H. Röttgering, B. Darvish, S. Santos, Monthly Notices of the Royal Astronomical Society 492 (2020) 1778–1790.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 11531 | OA
Elevated ionizing photon production efficiency in faint high-equivalent-width Lyman-α emitters
M.V. Maseda, R. Bacon, D. Lam, J.J. Matthee, J. Brinchmann, J. Schaye, I. Labbe, K.B. Schmidt, L. Boogaard, R. Bouwens, S. Cantalupo, M. Franx, T. Hashimoto, H. Inami, H. Kusakabe, G. Mahler, T. Nanayakkara, J. Richard, L. Wisotzki, Monthly Notices of the Royal Astronomical Society 493 (2020) 5120–5130.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 11539 | OA
The X-ray and radio activity of typical and luminous Ly α emitters from z ∼ 2 to z ∼ 6: Evidence for a diverse, evolving population
J. Calhau, D. Sobral, S. Santos, J.J. Matthee, A. Paulino-Afonso, A. Stroe, B. Simmons, C. Barlow-Hall, B. Adams, Monthly Notices of the Royal Astronomical Society 493 (2020) 3341–3362.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2020 | Conference Paper | IST-REx-ID: 11586 | OA
Unveiling the most luminous Lyman-α emitters in the epoch of reionisation
J.J. Matthee, D. Sobral, in:, Proceedings of the International Astronomical Union, Cambridge University Press, 2020, pp. 21–25.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2020 | Journal Article | IST-REx-ID: 8402 | OA
The mitochondrial carrier pathway transports non-canonical substrates with an odd number of transmembrane segments
H. Rampelt, I. Sucec, B. Bersch, P. Horten, I. Perschil, J.-C. Martinou, M. van der Laan, N. Wiedemann, P. Schanda, N. Pfanner, BMC Biology 18 (2020).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 12189 | OA
AXR1 affects DNA methylation independently of its role in regulating meiotic crossover localization
N. Christophorou, W. She, J. Long, A. Hurel, S. Beaubiat, Y. Idir, M. Tagliaro-Jahns, A. Chambon, V. Solier, D. Vezon, M. Grelon, X. Feng, N. Bouché, C. Mézard, PLOS Genetics 16 (2020).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2020 | Journal Article | IST-REx-ID: 8767 | OA
The Moran process on 2-chromatic graphs
K. Kaveh, A. McAvoy, K. Chatterjee, M.A. Nowak, PLOS Computational Biology 16 (2020).
[Published Version] View | Files available | DOI | WoS
 

2020 | Thesis | IST-REx-ID: 8653 | OA
The evolution of gene expression by copy number and point mutations
I. Tomanek, The Evolution of Gene Expression by Copy Number and Point Mutations, Institute of Science and Technology Austria, 2020.
[Published Version] View | Files available | DOI
 

2019 | Journal Article | IST-REx-ID: 11499 | OA
Exploring He II λ1640 emission line properties at z ∼2−4
T. Nanayakkara, J. Brinchmann, L. Boogaard, R. Bouwens, S. Cantalupo, A. Feltre, W. Kollatschny, R.A. Marino, M. Maseda, J.J. Matthee, M. Paalvast, J. Richard, A. Verhamme, Astronomy & Astrophysics 648 (2019).
[Published Version] View | Files available | DOI | Download Published Version (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 11507 | OA [Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 11535 | OA
The clustering of typical Ly α emitters from z ∼ 2.5–6: Host halo masses depend on Ly α and UV luminosities
A.A. Khostovan, D. Sobral, B. Mobasher, J.J. Matthee, R.K. Cochrane, N. Chartab, M. Jafariyazani, A. Paulino-Afonso, S. Santos, J. Calhau, Monthly Notices of the Royal Astronomical Society 489 (2019) 555–573.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 11541 | OA
On the nature and physical conditions of the luminous Ly α emitter CR7 and its rest-frame UV components
D. Sobral, J.J. Matthee, G. Brammer, A. Ferrara, L. Alegre, H. Röttgering, D. Schaerer, B. Mobasher, B. Darvish, Monthly Notices of the Royal Astronomical Society 482 (2019) 2422–2441.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 11540 | OA
The origin of scatter in the star formation rate–stellar mass relation
J.J. Matthee, J. Schaye, Monthly Notices of the Royal Astronomical Society 484 (2019) 915–932.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Research Data | IST-REx-ID: 7016 | OA [Published Version] View | Files available | DOI
 

2018 | Journal Article | IST-REx-ID: 11549
The clustering of H β + [O III] and [O II] emitters since z ∼ 5: Dependencies with line luminosity and stellar mass
A.A. Khostovan, D. Sobral, B. Mobasher, P.N. Best, I. Smail, J.J. Matthee, B. Darvish, H. Nayyeri, S. Hemmati, J.P. Stott, Monthly Notices of the Royal Astronomical Society 478 (2018) 2999–3015.
[Published Version] View | DOI | Download Published Version (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11557 | OA
The nature of luminous Ly α emitters at z ∼ 2–3: Maximal dust-poor starbursts and highly ionizing AGN
D. Sobral, J.J. Matthee, B. Darvish, I. Smail, P.N. Best, L. Alegre, H. Röttgering, B. Mobasher, A. Paulino-Afonso, A. Stroe, I. Oteo, Monthly Notices of the Royal Astronomical Society 477 (2018) 2817–2840.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11558 | OA
Slicing COSMOS with SC4K: The evolution of typical Ly α emitters and the Ly α escape fraction from z ∼ 2 to 6
D. Sobral, S. Santos, J.J. Matthee, A. Paulino-Afonso, B. Ribeiro, J. Calhau, A.A. Khostovan, Monthly Notices of the Royal Astronomical Society 476 (2018) 4725–4752.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2018 | Journal Article | IST-REx-ID: 11555 | OA
Kiloparsec-scale gaseous clumps and star formation at z = 5–7
S. Carniani, R. Maiolino, R. Amorin, L. Pentericci, A. Pallottini, A. Ferrara, C.J. Willott, R. Smit, J.J. Matthee, D. Sobral, P. Santini, M. Castellano, S. De Barros, A. Fontana, A. Grazian, L. Guaita, Monthly Notices of the Royal Astronomical Society 478 (2018) 1170–1184.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

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