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3349 Publications


2022 | Journal Article | IST-REx-ID: 11587 | OA
Zhang R, Kuo R, Coulter M, Calixto CPG, Entizne JC, Guo W, Marquez Y, Milne L, Riegler S, Matsui A, Tanaka M, Harvey S, Gao Y, Wießner-Kroh T, Paniagua A, Crespi M, Denby K, Hur AB, Huq E, Jantsch M, Jarmolowski A, Koester T, Laubinger S, Li QQ, Gu L, Seki M, Staiger D, Sunkar R, Szweykowska-Kulinska Z, Tu SL, Wachter A, Waugh R, Xiong L, Zhang XN, Conesa A, Reddy ASN, Barta A, Kalyna M, Brown JWS. 2022. A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis. Genome Biology. 23, 149.
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2022 | Journal Article | IST-REx-ID: 11447 | OA
R. J. Saona Urmeneta, F. Kondrashov, and K. Khudiakova, “Relation between the number of peaks and the number of reciprocal sign epistatic interactions,” Bulletin of Mathematical Biology, vol. 84, no. 8. Springer Nature, 2022.
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2022 | Journal Article | IST-REx-ID: 11330 | OA
M. Wirth, “A dual formula for the noncommutative transport distance,” Journal of Statistical Physics, vol. 187, no. 2. Springer Nature, 2022.
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2022 | Journal Article | IST-REx-ID: 9794 | OA
F. P. Assen et al., “Multitier mechanics control stromal adaptations in swelling lymph nodes,” Nature Immunology. Springer Nature, 2022.
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2022 | Journal Article | IST-REx-ID: 11637 | OA
L. Zhao et al., “ROS and cGMP signaling modulate persistent escape from hypoxia in Caenorhabditis elegans,” PLoS Biology, vol. 20, no. 6. Public Library of Science, 2022.
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2022 | Journal Article | IST-REx-ID: 11638 | OA
V. Ngampruetikorn, V. Sachdeva, J. Torrence, J. Humplik, D. J. Schwab, and S. E. Palmer, “Inferring couplings in networks across order-disorder phase transitions,” Physical Review Research, vol. 4, no. 2. American Physical Society, 2022.
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2022 | Journal Article | IST-REx-ID: 11411 | OA
P. Surendranadh, L. S. Arathoon, C. Baskett, D. Field, M. Pickup, and N. H. Barton, “Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus,” Genetics, vol. 221, no. 3. Oxford University Press, 2022.
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2022 | Research Data | IST-REx-ID: 11321 | OA
P. Surendranadh, L. S. Arathoon, C. Baskett, D. Field, M. Pickup, and N. H. Barton, “Effects of fine-scale population structure on the distribution of heterozygosity in a long-term study of Antirrhinum majus.” ISTA, 2022.
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2022 | Journal Article | IST-REx-ID: 10791 | OA
A. H. Hansen et al., “Tissue-wide effects override cell-intrinsic gene function in radial neuron migration,” Oxford Open Neuroscience, vol. 1, no. 1. Oxford Academic, 2022.
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2022 | Journal Article | IST-REx-ID: 11640 | OA
E. Szep, B. Trubenova, and K. Csilléry, “Using gridCoal to assess whether standard population genetic theory holds in the presence of spatio-temporal heterogeneity in population size,” Molecular Ecology Resources. Wiley, 2022.
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2022 | Journal Article | IST-REx-ID: 11658 | OA
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, and M. Saghafian, “Depth in arrangements: Dehn–Sommerville–Euler relations with applications,” Leibniz International Proceedings on Mathematics. Schloss Dagstuhl - Leibniz Zentrum für Informatik.
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2022 | Journal Article | IST-REx-ID: 11660 | OA
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, and M. Saghafian, “A window to the persistence of 1D maps. I: Geometric characterization of critical point pairs,” LIPIcs. Schloss Dagstuhl - Leibniz-Zentrum für Informatik.
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2022 | Journal Article | IST-REx-ID: 10758 | OA
R. C. A. Dubini, E. Korytiaková, T. Schinkel, P. Heinrichs, T. Carell, and P. Rovo, “1H NMR chemical exchange techniques reveal local and global effects of oxidized cytosine derivatives,” ACS Physical Chemistry Au, vol. 2, no. 3. American Chemical Society, pp. 237–246, 2022.
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2022 | Journal Article | IST-REx-ID: 10732 | OA
G. Cipolloni, L. Erdös, and D. J. Schröder, “Thermalisation for Wigner matrices,” Journal of Functional Analysis, vol. 282, no. 8. Elsevier, 2022.
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2022 | Journal Article | IST-REx-ID: 10770 | OA
T. Graham, M. Kleshnina, and J. A. Filar, “Where do mistakes lead? A survey of games with incompetent players,” Dynamic Games and Applications. Springer Nature, 2022.
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2022 | Journal Article | IST-REx-ID: 10772 | OA
N. H. Arguez, “Mirror symmetry for the Tate curve via tropical and log corals,” Journal of the London Mathematical Society, vol. 105, no. 1. London Mathematical Society, pp. 343–411, 2022.
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2022 | Preprint | IST-REx-ID: 10792 | OA
Z. Schaaf et al., “WDFY3 cell autonomously controls neuronal migration.” Research Square Platform.
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2022 | Journal Article | IST-REx-ID: 10765 | OA
Y. Cao and Z. Huang, “Arithmetic purity of the Hardy-Littlewood property and geometric sieve for affine quadrics,” Advances in Mathematics, vol. 398, no. 3. Elsevier, 2022.
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2022 | Journal Article | IST-REx-ID: 11442 | OA
M. Piovarci et al., “Closed-loop control of direct ink writing via reinforcement learning,” ACM Transactions on Graphics, vol. 41, no. 4. Association for Computing Machinery, 2022.
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2022 | Journal Article | IST-REx-ID: 10530 | OA
T. Zisis et al., “Disentangling cadherin-mediated cell-cell interactions in collective cancer cell migration,” Biophysical Journal, vol. 121, no. 1. Elsevier, pp. P44-60, 2022.
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2022 | Journal Article | IST-REx-ID: 10364 | OA
S. A. Hashemi, M. Mondelli, A. Fazeli, A. Vardy, J. Cioffi, and A. Goldsmith, “Parallelism versus latency in simplified successive-cancellation decoding of polar codes,” IEEE Transactions on Wireless Communications, vol. 21, no. 6. Institute of Electrical and Electronics Engineers, pp. 3909–3920, 2022.
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2022 | Journal Article | IST-REx-ID: 11443 | OA
M. A. Kwan, L. Sauermann, and Y. Zhao, “Extension complexity of low-dimensional polytopes,” Transactions of the American Mathematical Society, vol. 375, no. 6. American Mathematical Society, pp. 4209–4250, 2022.
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2022 | Journal Article | IST-REx-ID: 11703 | OA
M. A. Toups, B. Vicoso, and J. R. Pannell, “Dioecy and chromosomal sex determination are maintained through allopolyploid speciation in the plant genus Mercurialis,” PLoS Genetics, vol. 18, no. 7. Public Library of Science, 2022.
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2022 | Conference Paper | IST-REx-ID: 11707 | OA
A. Balliu, J. Hirvonen, D. Melnyk, D. Olivetti, J. Rybicki, and J. Suomela, “Local mending,” in International Colloquium on Structural Information and Communication Complexity, Paderborn, Germany, 2022, vol. 13298, pp. 1–20.
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2022 | Journal Article | IST-REx-ID: 11706 | OA
A. Liebenau, L. Mattos, W. Mendonca dos Santos, and J. Skokan, “Asymmetric Ramsey properties of random graphs involving cliques and cycles,” Random Structures and Algorithms. Wiley, 2022.
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2022 | Journal Article | IST-REx-ID: 11713 | OA
N. Nikolic, M. Sauert, T. G. Albanese, and I. Moll, “Quantifying heterologous gene expression during ectopic MazF production in Escherichia coli,” BMC Research Notes, vol. 15. Springer Nature, 2022.
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2022 | Journal Article | IST-REx-ID: 11701 | OA
A. Agresti and M. Veraar, “Nonlinear parabolic stochastic evolution equations in critical spaces Part I. Stochastic maximal regularity and local existence,” Nonlinearity, vol. 35, no. 8. IOP Publishing, pp. 4100–4210, 2022.
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2022 | Journal Article | IST-REx-ID: 11702 | OA
N. H. Barton, “The ‘New Synthesis,’” Proceedings of the National Academy of Sciences of the United States of America, vol. 119, no. 30. Proceedings of the National Academy of Sciences, 2022.
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2022 | Journal Article | IST-REx-ID: 11700 | OA
M. Erbar, D. L. Forkert, J. Maas, and D. Mugnolo, “Gradient flow formulation of diffusion equations in the Wasserstein space over a metric graph,” Networks and Heterogeneous Media, vol. 17, no. 5. American Institute of Mathematical Sciences, pp. 687–717, 2022.
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2022 | Journal Article | IST-REx-ID: 10787 | OA
N. H. Barton and O. O. Olusanya, “The response of a metapopulation to a changing environment,” Philosophical Transactions of the Royal Society B: Biological Sciences, vol. 377, no. 1848. The Royal Society, 2022.
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2022 | Journal Article | IST-REx-ID: 10773 | OA
R. Biswas, S. Cultrera di Montesano, H. Edelsbrunner, and M. Saghafian, “Continuous and discrete radius functions on Voronoi tessellations and Delaunay mosaics,” Discrete and Computational Geometry, vol. 67. Springer Nature, pp. 811–842, 2022.
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2022 | Conference Paper | IST-REx-ID: 11145 | OA
A. Ferber, M. A. Kwan, and L. Sauermann, “List-decodability with large radius for Reed-Solomon codes,” in 62nd Annual IEEE Symposium on Foundations of Computer Science, Denver, CO, United States, 2022, vol. 2022, pp. 720–726.
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2022 | Journal Article | IST-REx-ID: 11717 | OA
K. Drach and D. Schleicher, “Rigidity of Newton dynamics,” Advances in Mathematics, vol. 408. Elsevier, 2022.
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2022 | Journal Article | IST-REx-ID: 10771 | OA
Evers F, Aharony A, Bar-Gill N, Entin-Wohlman O, Hedegård P, Hod O, Jelinek P, Kamieniarz G, Lemeshko M, Michaeli K, Mujica V, Naaman R, Paltiel Y, Refaely-Abramson S, Tal O, Thijssen J, Thoss M, Van Ruitenbeek JM, Venkataraman L, Waldeck DH, Yan B, Kronik L. 2022. Theory of chirality induced spin selectivity: Progress and challenges. Advanced Materials. 34(13), 2106629.
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2022 | Journal Article | IST-REx-ID: 10775 | OA
A. Ferber, M. A. Kwan, and L. Sauermann, “List-decodability with large radius for Reed-Solomon codes,” IEEE Transactions on Information Theory, vol. 68, no. 6. IEEE, pp. 3823–3828, 2022.
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2022 | Journal Article | IST-REx-ID: 10776 | OA
Z. Patakova, M. Tancer, and U. Wagner, “Barycentric cuts through a convex body,” Discrete and Computational Geometry. Springer Nature, 2022.
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2022 | Journal Article | IST-REx-ID: 10887 | OA
G. Ivanov and M. Naszódi, “Functional John ellipsoids,” Journal of Functional Analysis, vol. 282, no. 11. Elsevier, 2022.
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2022 | Journal Article | IST-REx-ID: 10813 | OA
D. Cao et al., “Threshold potentials for fast kinetics during mediated redox catalysis of insulators in Li–O2 and Li–S batteries,” Nature Catalysis, vol. 5. Springer Nature, pp. 193–201, 2022.
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2022 | Journal Article | IST-REx-ID: 10918 | OA
S. Emtenani et al., “Macrophage mitochondrial bioenergetics and tissue invasion are boosted by an Atossa-Porthos axis in Drosophila,” The Embo Journal, vol. 41. Embo Press, 2022.
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2022 | Journal Article | IST-REx-ID: 11155 | OA
M. Obr, W. J. H. Hagen, R. A. Dick, L. Yu, A. Kotecha, and F. K. Schur, “Exploring high-resolution cryo-ET and subtomogram averaging capabilities of contemporary DEDs,” Journal of Structural Biology, vol. 214, no. 2. Elsevier, 2022.
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2022 | Journal Article | IST-REx-ID: 10925 | OA
B. Yang and Z. Yang, “On the wavenumber-frequency spectrum of the wall pressure fluctuations in turbulent channel flow,” Journal of Fluid Mechanics, vol. 937. Cambridge University Press, 2022.
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2022 | Journal Article | IST-REx-ID: 11341 | OA
M. Lukacisin, A. Espinosa-Cantú, and M. T. Bollenbach, “Intron-mediated induction of phenotypic heterogeneity,” Nature, vol. 605. Springer Nature, pp. 113–118, 2022.
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2022 | Journal Article | IST-REx-ID: 11334 | OA
S. Freitas et al., “Parthenogenesis in Darevskia lizards: A rare outcome of common hybridization, not a common outcome of rare hybridization,” Evolution, vol. 76, no. 5. Wiley, pp. 899–914, 2022.
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2022 | Journal Article | IST-REx-ID: 11332 | OA
K. Schnelli and Y. Xu, “Convergence rate to the Tracy–Widom laws for the largest Eigenvalue of Wigner matrices,” Communications in Mathematical Physics, vol. 393. Springer Nature, pp. 839–907, 2022.
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2022 | Journal Article | IST-REx-ID: 11343 | OA
E. Aguilera, M. G. Clerc, and V. Zambra, “Vortices nucleation by inherent fluctuations in nematic liquid crystal cells,” Nonlinear Dynamics, vol. 108. Springer Nature, pp. 3209–3218, 2022.
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2022 | Journal Article | IST-REx-ID: 11167 | OA
D. Kampjut and L. A. Sazanov, “Structure of respiratory complex I – An emerging blueprint for the mechanism,” Current Opinion in Structural Biology, vol. 74. Elsevier, 2022.
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2022 | Journal Article | IST-REx-ID: 11351 | OA
W. J. Nicolas, F. Fäßler, P. Dutka, F. K. Schur, G. Jensen, and E. Meyerowitz, “Cryo-electron tomography of the onion cell wall shows bimodally oriented cellulose fibers and reticulated homogalacturonan networks,” Current Biology, vol. 32, no. 11. Elsevier, pp. P2375-2389, 2022.
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2022 | Journal Article | IST-REx-ID: 10547 | OA
J. L. Fischer, K. Hopf, M. Kniely, and A. Mielke, “Global existence analysis of energy-reaction-diffusion systems,” SIAM Journal on Mathematical Analysis, vol. 54, no. 1. Society for Industrial and Applied Mathematics, pp. 220–267, 2022.
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2022 | Journal Article | IST-REx-ID: 10583 | OA
S. Struk et al., “Transcriptional analysis in the Arabidopsis roots reveals new regulators that link rac-GR24 treatment with changes in flavonol accumulation, root hair elongation and lateral root density,” Plant & Cell Physiology, vol. 63, no. 1. Oxford University Press, pp. 104–119, 2022.
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2022 | Conference Paper | IST-REx-ID: 10774 | OA
E. Bartocci, T. Ferrere, T. A. Henzinger, D. Nickovic, and A. O. Da Costa, “Flavors of sequential information flow,” in Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics), Philadelphia, PA, United States, 2022, vol. 13182, pp. 1–19.
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