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4524 Publications


2019 | Journal Article | IST-REx-ID: 105 | OA
CUGC for pontocerebellar hypoplasia type 9 and spastic paraplegia-63
A. Marsh, G. Novarino, P. Lockhart, R. Leventer, European Journal of Human Genetics 27 (2019) 161–166.
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2019 | Journal Article | IST-REx-ID: 27 | OA
Epigenetic cues modulating the generation of cell type diversity in the cerebral cortex
N. Amberg, S. Laukoter, S. Hippenmeyer, Journal of Neurochemistry 149 (2019) 12–26.
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2019 | Journal Article | IST-REx-ID: 9460 | OA
DNA demethylation by ROS1a in rice vegetative cells promotes methylation in sperm
M.Y. Kim, A. Ono, S. Scholten, T. Kinoshita, D. Zilberman, T. Okamoto, R.L. Fischer, Proceedings of the National Academy of Sciences 116 (2019) 9652–9657.
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2019 | Journal Article | IST-REx-ID: 9530 | OA
DNA methylation is maintained with high fidelity in the honey bee germline and exhibits global non-functional fluctuations during somatic development
K.D. Harris, J.P.B. Lloyd, K. Domb, D. Zilberman, A. Zemach, Epigenetics and Chromatin 12 (2019).
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2019 | Journal Article | IST-REx-ID: 9580 | OA
Hypergraph cuts above the average
D. Conlon, J. Fox, M.A. Kwan, B. Sudakov, Israel Journal of Mathematics 233 (2019) 67–111.
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2019 | Journal Article | IST-REx-ID: 9585 | OA
Proof of a conjecture on induced subgraphs of Ramsey graphs
M.A. Kwan, B. Sudakov, Transactions of the American Mathematical Society 372 (2019) 5571–5594.
View | DOI | Download Submitted Version (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 9586 | OA
Anticoncentration for subgraph statistics
M.A. Kwan, B. Sudakov, T. Tran, Journal of the London Mathematical Society 99 (2019) 757–777.
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2019 | Journal Article | IST-REx-ID: 9677 | OA
i-PI 2.0: A universal force engine for advanced molecular simulations
Kapil V, Rossi M, Marsalek O, Petraglia R, Litman Y, Spura T, Cheng B, Cuzzocrea A, Meißner RH, Wilkins DM, Helfrecht BA, Juda P, Bienvenue SP, Fang W, Kessler J, Poltavsky I, Vandenbrande S, Wieme J, Corminboeuf C, Kühne TD, Manolopoulos DE, Markland TE, Richardson JO, Tkatchenko A, Tribello GA, Van Speybroeck V, Ceriotti M. 2019. i-PI 2.0: A universal force engine for advanced molecular simulations. Computer Physics Communications. 236, 214–223.
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2019 | Journal Article | IST-REx-ID: 9680 | OA
Iterative unbiasing of quasi-equilibrium sampling
F. Giberti, B. Cheng, G.A. Tribello, M. Ceriotti, Journal of Chemical Theory and Computation 16 (2019) 100–107.
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2019 | Journal Article | IST-REx-ID: 9689 | OA
Ab initio thermodynamics of liquid and solid water
B. Cheng, E.A. Engel, J. Behler, C. Dellago, M. Ceriotti, Proceedings of the National Academy of Sciences 116 (2019) 1110–1115.
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2019 | Journal Article | IST-REx-ID: 405 | OA
Jointly convex quantum Jensen divergences
D. Virosztek, Linear Algebra and Its Applications 576 (2019) 67–78.
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2019 | Journal Article | IST-REx-ID: 429 | OA
Stability of the matrix Dyson equation and random matrices with correlations
O.H. Ajanki, L. Erdös, T.H. Krüger, Probability Theory and Related Fields 173 (2019) 293–373.
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2019 | Journal Article | IST-REx-ID: 439 | OA
Arithmetic and representation theory of wild character varieties
T. Hausel, M. Mereb, M. Wong, Journal of the European Mathematical Society 21 (2019) 2995–3052.
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2019 | Journal Article | IST-REx-ID: 441 | OA
Tropical formulae for summation over a part of SL(2,Z)
N. Kalinin, M. Shkolnikov, European Journal of Mathematics 5 (2019) 909–928.
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2019 | Conference Paper | IST-REx-ID: 10877 | OA
ARCH-COMP19 Category Report: Hybrid systems with piecewise constant dynamics
G. Frehse, A. Abate, D. Adzkiya, A. Becchi, L. Bu, A. Cimatti, M. Giacobbe, A. Griggio, S. Mover, M.S. Mufid, I. Riouak, S. Tonetta, E. Zaffanella, in:, G. Frehse, M. Althoff (Eds.), ARCH19. 6th International Workshop on Applied Verification of Continuous and Hybrid Systems, EasyChair, 2019, pp. 1–13.
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2019 | Journal Article | IST-REx-ID: 7391 | OA
Electron microscopic detection of single membrane proteins by a specific chemical labeling
S. Tabata, M. Jevtic, N. Kurashige, H. Fuchida, M. Kido, K. Tani, N. Zenmyo, S. Uchinomiya, H. Harada, M. Itakura, I. Hamachi, R. Shigemoto, A. Ojida, IScience 22 (2019) 256–268.
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2019 | Conference Paper | IST-REx-ID: 7402 | OA
Graph planning with expected finite horizon
K. Chatterjee, L. Doyen, in:, 34th Annual ACM/IEEE Symposium on Logic in Computer Science, IEEE, 2019, pp. 1–13.
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2019 | Journal Article | IST-REx-ID: 196 | OA
Harmonic dynamics of the Abelian sandpile
M. Lang, M. Shkolnikov, Proceedings of the National Academy of Sciences 116 (2019) 2821–2830.
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2019 | Conference Paper | IST-REx-ID: 6884 | OA
Bidding mechanisms in graph games
G. Avni, T.A. Henzinger, D. Zikelic, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2019.
View | Files available | DOI | arXiv
 

2019 | Preprint | IST-REx-ID: 7358 | OA
TGFβ superfamily signaling regulates the state of human stem cell pluripotency and competency to create telencephalic organoids
M. Watanabe, J.R. Haney, N. Vishlaghi, F. Turcios, J.E. Buth, W. Gu, A.J. Collier, O. Miranda, D. Chen, S. Sabri, A.T. Clark, K. Plath, H.R. Christofk, M.J. Gandal, B.G. Novitch, BioRxiv (2019).
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2019 | Journal Article | IST-REx-ID: 7550 | OA
Penalization via global functionals of optimal-control problems for dissipative evolution
L. Portinale, U. Stefanelli, Advances in Mathematical Sciences and Applications 28 (2019) 425–447.
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2019 | Preprint | IST-REx-ID: 8182 | OA View | Files available | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 11061 | OA
Visualization of long-lived proteins reveals age mosaicism within nuclei of postmitotic cells
B.H. Toyama, R. Arrojo e Drigo, V. Lev-Ram, R. Ramachandra, T.J. Deerinck, C. Lechene, M.H. Ellisman, M. Hetzer, Journal of Cell Biology 218 (2019) 433–444.
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2019 | Journal Article | IST-REx-ID: 11060 | OA
Selective clearance of the inner nuclear membrane protein emerin by vesicular transport during ER stress
A. Buchwalter, R. Schulte, H. Tsai, J. Capitanio, M. Hetzer, ELife 8 (2019).
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2019 | Journal Article | IST-REx-ID: 11062 | OA
Age mosaicism across multiple scales in adult tissues
R. Arrojo e Drigo, V. Lev-Ram, S. Tyagi, R. Ramachandra, T. Deerinck, E. Bushong, S. Phan, V. Orphan, C. Lechene, M.H. Ellisman, M. Hetzer, Cell Metabolism 30 (2019) 343–351.e3.
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2019 | Journal Article | IST-REx-ID: 11505 | OA
Faint end of the z ∼ 3–7 luminosity function of Lyman-alpha emitters behind lensing clusters observed with MUSE
de La Vieuville G, Bina D, Pello R, Mahler G, Richard J, Drake AB, Herenz EC, Bauer FE, Clément B, Lagattuta D, Laporte N, Martinez J, Patrício V, Wisotzki L, Zabl J, Bouwens RJ, Contini T, Garel T, Guiderdoni B, Marino RA, Maseda MV, Matthee JJ, Schaye J, Soucail G. 2019. Faint end of the z ∼ 3–7 luminosity function of Lyman-alpha emitters behind lensing clusters observed with MUSE. Astronomy & Astrophysics. 628, A3.
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2019 | Journal Article | IST-REx-ID: 11499 | OA
Exploring He II λ1640 emission line properties at z ∼2−4
T. Nanayakkara, J. Brinchmann, L. Boogaard, R. Bouwens, S. Cantalupo, A. Feltre, W. Kollatschny, R.A. Marino, M. Maseda, J.J. Matthee, M. Paalvast, J. Richard, A. Verhamme, Astronomy & Astrophysics 648 (2019).
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2019 | Journal Article | IST-REx-ID: 11514 | OA
The ALMA spectroscopic survey in the HUDF: Nature and physical properties of gas-mass selected galaxies using MUSE spectroscopy
Boogaard LA, Decarli R, González-López J, van der Werf P, Walter F, Bouwens R, Aravena M, Carilli C, Bauer FE, Brinchmann J, Contini T, Cox P, da Cunha E, Daddi E, Díaz-Santos T, Hodge J, Inami H, Ivison R, Maseda M, Matthee JJ, Oesch P, Popping G, Riechers D, Schaye J, Schouws S, Smail I, Weiss A, Wisotzki L, Bacon R, Cortes PC, Rix H-W, Somerville RS, Swinbank M, Wagg J. 2019. The ALMA spectroscopic survey in the HUDF: Nature and physical properties of gas-mass selected galaxies using MUSE spectroscopy. The Astrophysical Journal. 882(2), 140.
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2019 | Conference Paper | IST-REx-ID: 6493 | OA
Membership-based synthesis of linear hybrid automata
M. Garcia Soto, T.A. Henzinger, C. Schilling, L. Zeleznik, in:, 31st International Conference on Computer-Aided Verification, Springer, 2019, pp. 297–314.
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2019 | Conference Paper | IST-REx-ID: 6887 | OA
Near-linear time algorithms for Streett objectives in graphs and MDPs
K. Chatterjee, W. Dvorák, M.H. Henzinger, A. Svozil, in:, Leibniz International Proceedings in Informatics, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2019.
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2019 | Journal Article | IST-REx-ID: 11516 | OA
A giant Lyα nebula and a small-scale clumpy outflow in the system of the exotic quasar J0952+0114 unveiled by MUSE
R.A. Marino, S. Cantalupo, G. Pezzulli, S.J. Lilly, S. Gallego, R. Mackenzie, J.J. Matthee, J. Brinchmann, N. Bouché, A. Feltre, S. Muzahid, I. Schroetter, S.D. Johnson, T. Nanayakkara, The Astrophysical Journal 880 (2019).
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2019 | Journal Article | IST-REx-ID: 11515 | OA
Resolved UV and [C ii] structures of luminous galaxies within the epoch of reionization
J.J. Matthee, D. Sobral, L.A. Boogaard, H. Röttgering, L. Vallini, A. Ferrara, A. Paulino-Afonso, F. Boone, D. Schaerer, B. Mobasher, The Astrophysical Journal 881 (2019).
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2019 | Journal Article | IST-REx-ID: 11517 | OA
On the elevation and suppression of star formation within galaxies
E. Wang, S.J. Lilly, G. Pezzulli, J.J. Matthee, The Astrophysical Journal 877 (2019).
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2019 | Journal Article | IST-REx-ID: 11541 | OA
On the nature and physical conditions of the luminous Ly α emitter CR7 and its rest-frame UV components
D. Sobral, J.J. Matthee, G. Brammer, A. Ferrara, L. Alegre, H. Röttgering, D. Schaerer, B. Mobasher, B. Darvish, Monthly Notices of the Royal Astronomical Society 482 (2019) 2422–2441.
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2019 | Journal Article | IST-REx-ID: 11535 | OA
The clustering of typical Ly α emitters from z ∼ 2.5–6: Host halo masses depend on Ly α and UV luminosities
A.A. Khostovan, D. Sobral, B. Mobasher, J.J. Matthee, R.K. Cochrane, N. Chartab, M. Jafariyazani, A. Paulino-Afonso, S. Santos, J. Calhau, Monthly Notices of the Royal Astronomical Society 489 (2019) 555–573.
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2019 | Journal Article | IST-REx-ID: 11540 | OA
The origin of scatter in the star formation rate–stellar mass relation
J.J. Matthee, J. Schaye, Monthly Notices of the Royal Astronomical Society 484 (2019) 915–932.
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2019 | Journal Article | IST-REx-ID: 11613 | OA
Revisiting the impact of stellar magnetic activity on the detectability of solar-like oscillations by Kepler
S. Mathur, R.A. García, L.A. Bugnet, Â.R.G. Santos, N. Santiago, P.G. Beck, Frontiers in Astronomy and Space Sciences 6 (2019).
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2019 | Journal Article | IST-REx-ID: 11616 | OA
A hot Saturn orbiting an oscillating late subgiant discovered by TESS
Huber D et al. 2019. A hot Saturn orbiting an oscillating late subgiant discovered by TESS. The Astronomical Journal. 157(6), 245.
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2019 | Journal Article | IST-REx-ID: 11615 | OA
A search for red giant solar-like oscillations in all Kepler data
M. Hon, D. Stello, R.A. García, S. Mathur, S. Sharma, I.L. Colman, L.A. Bugnet, Monthly Notices of the Royal Astronomical Society 485 (2019) 5616–5630.
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2019 | Journal Article | IST-REx-ID: 11623 | OA
Surface rotation and photometric activity for Kepler targets. I. M and K main-sequence stars
A.R.G. Santos, R.A. García, S. Mathur, L.A. Bugnet, J.L. van Saders, T.S. Metcalfe, G.V.A. Simonian, M.H. Pinsonneault, The Astrophysical Journal Supplement Series 244 (2019).
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2019 | Journal Article | IST-REx-ID: 11614 | OA
FliPerClass: In search of solar-like pulsators among TESS targets
L.A. Bugnet, R.A. García, S. Mathur, G.R. Davies, O.J. Hall, M.N. Lund, B.M. Rendle, Astronomy & Astrophysics 624 (2019).
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2019 | Preprint | IST-REx-ID: 11627 | OA
Determining surface rotation periods of solar-like stars observed by the Kepler mission using machine learning techniques
S.N. Breton, L.A. Bugnet, A.R.G. Santos, A.L. Saux, S. Mathur, P.L. Palle, R.A. Garcia, ArXiv (n.d.).
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2019 | Preprint | IST-REx-ID: 11630 | OA
Automatic classification of K2 pulsating stars using machine learning techniques
A.L. Saux, L.A. Bugnet, S. Mathur, S.N. Breton, R.A. Garcia, ArXiv (n.d.).
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2019 | Journal Article | IST-REx-ID: 6194 | OA
The entorhinal cognitive map is attracted to goals
C.N. Boccara, M. Nardin, F. Stella, J. O’Neill, J.L. Csicsvari, Science 363 (2019) 1443–1447.
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2019 | Research Data Reference | IST-REx-ID: 9731 | OA
Additional file 11 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O. Sigalova, A. Chaplin, O. Bochkareva, P. Shelyakin, V. Filaretov, E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Conference Paper | IST-REx-ID: 8324 | OA
Proving expected sensitivity of probabilistic programs with randomized variable-dependent termination time
P. Wang, H. Fu, K. Chatterjee, Y. Deng, M. Xu, in:, Proceedings of the ACM on Programming Languages, ACM, 2019.
View | Files available | DOI | arXiv
 

2019 | Journal Article | IST-REx-ID: 6819 | OA
Glyphosate does not substitute for glycine in proteins of actively dividing mammalian cells
M.N. Antoniou, A. Nicolas, R. Mesnage, M. Biserni, F.V. Rao, C.V. Martin, BMC Research Notes 12 (2019).
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2019 | Research Data Reference | IST-REx-ID: 9783 | OA
Additional file 10 of Chlamydia pan-genomic analysis reveals balance between host adaptation and selective pressure to genome reduction
O.M. Sigalova, A.V. Chaplin, O. Bochkareva, P.V. Shelyakin, V.A. Filaretov, E.E. Akkuratov, V. Burskaia, M.S. Gelfand, (2019).
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2019 | Research Data Reference | IST-REx-ID: 9784 | OA
MOESM1 of Glyphosate does not substitute for glycine in proteins of actively dividing mammalian cells
M.N. Antoniou, A. Nicolas, R. Mesnage, M. Biserni, F.V. Rao, C.V. Martin, (2019).
View | Files available | DOI | Download Published Version (ext.)
 

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