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200 Publications
2006 | Book Chapter | IST-REx-ID: 3722
Rastersondenmikroskopie
H.L. Janovjak, D. Mueller, in:, Bioanalytik, Spektrum Akademischer Verlag, 2006.
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H.L. Janovjak, D. Mueller, in:, Bioanalytik, Spektrum Akademischer Verlag, 2006.
2006 | Journal Article | IST-REx-ID: 3728
Pulling single bacteriorhodopsin out of a membrane: Comparison of simulation and experiment
M. Cieplak, S. Filipek, H.L. Janovjak, K. Krzysko, Biochimica et Biophysica Acta (BBA) - Biomembranes 1758 (2006) 537–544.
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| DOI
M. Cieplak, S. Filipek, H.L. Janovjak, K. Krzysko, Biochimica et Biophysica Acta (BBA) - Biomembranes 1758 (2006) 537–544.
2006 | Journal Article | IST-REx-ID: 3729
Direct measurement of single-molecule visco-elasticity in atomic force microscope force-extension experiments
C. Bippes, A. Humphris, M. Stark, D. Mueller, H.L. Janovjak, European Biophysics Journal 35 (2006) 287–292.
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C. Bippes, A. Humphris, M. Stark, D. Mueller, H.L. Janovjak, European Biophysics Journal 35 (2006) 287–292.
2006 | Journal Article | IST-REx-ID: 3750
Protein expression enhancement in efflux-deleted mutant bacteria
T. Le, C.C. Guet, P. Cluzel, Protein Expression and Purification 48 (2006) 28–31.
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T. Le, C.C. Guet, P. Cluzel, Protein Expression and Purification 48 (2006) 28–31.
2006 | Journal Article | IST-REx-ID: 3755 | 
Dynamical determinants of drug-inducible gene expression in a single bacterium
T. Le, T. Emonet, S. Harlepp, C.C. Guet, P. Cluzel, Biophysical Journal 90 (2006) 3315–3321.
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T. Le, T. Emonet, S. Harlepp, C.C. Guet, P. Cluzel, Biophysical Journal 90 (2006) 3315–3321.
2006 | Conference Paper | IST-REx-ID: 3758
Keyframe control of complex particle systems using the adjoint method
C.J. Wojtan, P. Mucha, G. Turk, in:, ACM, 2006, pp. 15–23.
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C.J. Wojtan, P. Mucha, G. Turk, in:, ACM, 2006, pp. 15–23.
2006 | Journal Article | IST-REx-ID: 3767
Determinants of simulated RNA evolution.
A. Kupczok, P. Dittrich, Journal of Theoretical Biology 238 (2006) 726–35.
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A. Kupczok, P. Dittrich, Journal of Theoretical Biology 238 (2006) 726–35.
2006 | Journal Article | IST-REx-ID: 3811
Shunting inhibition improves robustness of gamma oscillations in hippocampal interneuron networks by homogenizing firing rates
I. Vida, M. Bartos, P.M. Jonas, Neuron 49 (2006) 107–17.
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I. Vida, M. Bartos, P.M. Jonas, Neuron 49 (2006) 107–17.
2006 | Journal Article | IST-REx-ID: 3813 |
Hyperpolarization-activated cation channels in fast-spiking interneurons of rat hippocampus
Y. Aponte, C. Lien, E. Reisinger, P.M. Jonas, Journal of Physiology 574 (2006) 229–43.
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Y. Aponte, C. Lien, E. Reisinger, P.M. Jonas, Journal of Physiology 574 (2006) 229–43.
2006 | Book Review | IST-REx-ID: 3814
Synapses formed by normal and abnormal hippocampal mossy fibers (Review)
M. Frotscher, P.M. Jonas, R. Sloviter, Cell and Tissue Research 326 (2006) 361–7.
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M. Frotscher, P.M. Jonas, R. Sloviter, Cell and Tissue Research 326 (2006) 361–7.
2006 | Journal Article | IST-REx-ID: 3815
Timing and efficacy of transmitter release at mossy fiber synapses in the hippocampal network
J. Bischofberger, D. Engel, M. Frotscher, P.M. Jonas, Pflugers Archiv : European Journal of Physiology 453 (2006) 361–72.
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J. Bischofberger, D. Engel, M. Frotscher, P.M. Jonas, Pflugers Archiv : European Journal of Physiology 453 (2006) 361–72.
2006 | Journal Article | IST-REx-ID: 3817
The most important recent advances in synapse research from my point of view--and what remains to be done
M. Frotscher, E. Gundelfinger, P.M. Jonas, E. Neher, P. Seeburg, Cell and Tissue Research 326 (2006) 203–4.
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M. Frotscher, E. Gundelfinger, P.M. Jonas, E. Neher, P. Seeburg, Cell and Tissue Research 326 (2006) 203–4.
2006 | Journal Article | IST-REx-ID: 3818
Patch-clamp recording from mossy fiber terminals in hippocampal slices
J. Bischofberger, D. Engel, L. Li, J. Geiger, P.M. Jonas, Nature Protocols 1 (2006) 2075–81.
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J. Bischofberger, D. Engel, L. Li, J. Geiger, P.M. Jonas, Nature Protocols 1 (2006) 2075–81.
2006 | Conference Paper | IST-REx-ID: 3888
Strategy improvement for stochastic Rabin and Streett games
K. Chatterjee, T.A. Henzinger, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2006, pp. 375–389.
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K. Chatterjee, T.A. Henzinger, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2006, pp. 375–389.
2006 | Conference Paper | IST-REx-ID: 3889
Algorithms for omega-regular games with imperfect information
K. Chatterjee, L. Doyen, T.A. Henzinger, J. Raskin, in:, Springer, 2006, pp. 287–302.
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K. Chatterjee, L. Doyen, T.A. Henzinger, J. Raskin, in:, Springer, 2006, pp. 287–302.
2006 | Conference Paper | IST-REx-ID: 3890
The complexity of quantitative concurrent parity games
K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, SIAM, 2006, pp. 678–687.
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K. Chatterjee, L. De Alfaro, T.A. Henzinger, in:, SIAM, 2006, pp. 678–687.
2006 | Conference Paper | IST-REx-ID: 3891
Concurrent games with tail objectives
K. Chatterjee, in:, Springer, 2006, pp. 256–270.
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K. Chatterjee, in:, Springer, 2006, pp. 256–270.
2006 | Journal Article | IST-REx-ID: 3908
Long repeats in a huge gemome: microsatellite loci in the grasshopper Chorthippus biguttulus
J. Ustinova, R. Achmann, S. Cremer, F. Mayer, Journal of Molecular Evolution 62 (2006) 158–167.
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J. Ustinova, R. Achmann, S. Cremer, F. Mayer, Journal of Molecular Evolution 62 (2006) 158–167.
2006 | Journal Article | IST-REx-ID: 3912
Attack of the invasive garden ant: aggression behaviour of Lasius neglectus (Hymenoptera: Formicidae) against native Lasius species in Spain
S. Cremer, L.V. Ugelvig, S. Lommen, K. Petersen, J. Pedersen, Myrmecological News 9 (2006) 13–19.
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S. Cremer, L.V. Ugelvig, S. Lommen, K. Petersen, J. Pedersen, Myrmecological News 9 (2006) 13–19.
2006 | Journal Article | IST-REx-ID: 3913
Stealthy invaders: the biology of Cardiocondyla tramp ants
J. Heinze, S. Cremer, N. Eckl, A. Schrempf, Insectes Sociaux 53 (2006) 1–7.
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J. Heinze, S. Cremer, N. Eckl, A. Schrempf, Insectes Sociaux 53 (2006) 1–7.
2006 | Journal Article | IST-REx-ID: 3914
Optimal species distinction by discriminant analysis: comparing established methods of character selection with a combination procedure using ant morphometrics as a case study
K. Moder, B. Schlick Steiner, F. Steiner, S. Cremer, E. Christian, B. Seifert, Journal of Zoological Systematics and Evolutionary Research 45 (2006) 82–87.
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K. Moder, B. Schlick Steiner, F. Steiner, S. Cremer, E. Christian, B. Seifert, Journal of Zoological Systematics and Evolutionary Research 45 (2006) 82–87.
2006 | Journal Article | IST-REx-ID: 3932
EGF-stimulated migration in ovarian cancer cells is associated with decreased internalization, increased surface expression, and increased shedding of the urokinase plasminogen activator receptor
E. Henic, M.K. Sixt, S. Hansson, G. Høyer Hansen, B. Casslén, Gynecologic Oncology 101 (2006) 28–39.
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E. Henic, M.K. Sixt, S. Hansson, G. Høyer Hansen, B. Casslén, Gynecologic Oncology 101 (2006) 28–39.
2006 | Journal Article | IST-REx-ID: 3934
Characterization of a conduit system containing laminin-5 in the human thymus: a potential transport system for small molecules
M. Drumea Mirancea, J. Wessels, C. Müller, M. Essl, J. Eble, E. Tolosa, M. Koch, D. Reinhardt, M.K. Sixt, L. Sorokin, Y. Stierhof, H. Schwarz, G. Klein, Journal of Cell Science 119 (2006) 1396–1405.
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M. Drumea Mirancea, J. Wessels, C. Müller, M. Essl, J. Eble, E. Tolosa, M. Koch, D. Reinhardt, M.K. Sixt, L. Sorokin, Y. Stierhof, H. Schwarz, G. Klein, Journal of Cell Science 119 (2006) 1396–1405.
2006 | Journal Article | IST-REx-ID: 3935
γ-Parvin is dispensable for hematopoiesis, leukocyte trafficking, and T-cell-dependent antibody response
H. Chu, I. Thievessen, M.K. Sixt, T. Lämmermann, A. Waisman, A. Braun, A. Noegel, R. Fässler, Molecular and Cellular Biology 26 (2006) 1817–1825.
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H. Chu, I. Thievessen, M.K. Sixt, T. Lämmermann, A. Waisman, A. Braun, A. Noegel, R. Fässler, Molecular and Cellular Biology 26 (2006) 1817–1825.
2006 | Journal Article | IST-REx-ID: 3936
β1 integrins: zip codes and signaling relay for blood cells
M.K. Sixt, M. Bauer, T. Lämmermann, R. Fässler, Current Opinion in Cell Biology 18 (2006) 482–490.
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M.K. Sixt, M. Bauer, T. Lämmermann, R. Fässler, Current Opinion in Cell Biology 18 (2006) 482–490.
2006 | Journal Article | IST-REx-ID: 3978
Evaluating the quality of NMR structures by local density of protons
Y. Ban, J. Rudolph, P. Zhou, H. Edelsbrunner, Proteins: Structure, Function and Bioinformatics 62 (2006) 852–864.
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Y. Ban, J. Rudolph, P. Zhou, H. Edelsbrunner, Proteins: Structure, Function and Bioinformatics 62 (2006) 852–864.
2006 | Journal Article | IST-REx-ID: 3979
Interface surfaces for protein-protein complexes
Y. Ban, H. Edelsbrunner, J. Rudolph, Journal of the ACM 53 (2006) 361–378.
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Y. Ban, H. Edelsbrunner, J. Rudolph, Journal of the ACM 53 (2006) 361–378.
2006 | Journal Article | IST-REx-ID: 3980
Extreme elevation on a 2-manifold
P. Agarwal, H. Edelsbrunner, J. Harer, Y. Wang, Discrete & Computational Geometry 36 (2006) 553–572.
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P. Agarwal, H. Edelsbrunner, J. Harer, Y. Wang, Discrete & Computational Geometry 36 (2006) 553–572.
2006 | Journal Article | IST-REx-ID: 4140
Wnt11 controls cell contact persistence by local accumulation of Frizzled 7 at the plasma membrane
S. Witzel, V. Zimyanin, F. Carreira Barbosa, M. Tada, C.-P.J. Heisenberg, Journal of Cell Biology 175 (2006) 791–802.
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S. Witzel, V. Zimyanin, F. Carreira Barbosa, M. Tada, C.-P.J. Heisenberg, Journal of Cell Biology 175 (2006) 791–802.
2006 | Journal Article | IST-REx-ID: 4145
Single-cell detection of microRNAs in developing vertebrate embryos after acute administration of a dual-fluorescence reporter/sensor plasmid
D. Tonelli, F. Calegari, J. Fei, T. Nomura, N. Osumi, C.-P.J. Heisenberg, W. Huttner, Biotechniques 41 (2006) 727–732.
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D. Tonelli, F. Calegari, J. Fei, T. Nomura, N. Osumi, C.-P.J. Heisenberg, W. Huttner, Biotechniques 41 (2006) 727–732.
2006 | Journal Article | IST-REx-ID: 4173 |
Proteomics of early zebrafish embryos
V. Link, A. Shevchenko, C.-P.J. Heisenberg, BMC Developmental Biology 6 (2006) 1–9.
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V. Link, A. Shevchenko, C.-P.J. Heisenberg, BMC Developmental Biology 6 (2006) 1–9.
2006 | Journal Article | IST-REx-ID: 4176
Identification of regulators of germ layer morphogenesis using proteomics in zebrafish
V. Link, L. Carvalho, I. Castanon, P. Stockinger, A. Shevchenko, C.-P.J. Heisenberg, Journal of Cell Science 119 (2006) 2073–2083.
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V. Link, L. Carvalho, I. Castanon, P. Stockinger, A. Shevchenko, C.-P.J. Heisenberg, Journal of Cell Science 119 (2006) 2073–2083.
2006 | Journal Article | IST-REx-ID: 4178
Analysis and visualization of cell movement in the developing zebrafish brain
T. Langenberg, T. Dracz, A. Oates, C.-P.J. Heisenberg, M. Brand, Developmental Dynamics 235 (2006) 928–933.
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T. Langenberg, T. Dracz, A. Oates, C.-P.J. Heisenberg, M. Brand, Developmental Dynamics 235 (2006) 928–933.
2006 | Journal Article | IST-REx-ID: 4184
Coordinated cell-shape changes control epithelial movement in zebrafish and Drosophila
M. Köppen, B. Fernández, L. Carvalho, A. Jacinto, C.-P.J. Heisenberg, Development 133 (2006) 2671–2681.
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M. Köppen, B. Fernández, L. Carvalho, A. Jacinto, C.-P.J. Heisenberg, Development 133 (2006) 2671–2681.
2006 | Journal Article | IST-REx-ID: 4218
Migration of zebrafish primordial germ cells: A role for myosin contraction and cytoplasmic flow
H. Blaser, M. Reichman Fried, I. Castanon, K. Dumstrei, F. Marlow, K. Kawakami, L. Solnica Krezel, C.-P.J. Heisenberg, E. Raz, Developmental Cell 11 (2006) 613–627.
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H. Blaser, M. Reichman Fried, I. Castanon, K. Dumstrei, F. Marlow, K. Kawakami, L. Solnica Krezel, C.-P.J. Heisenberg, E. Raz, Developmental Cell 11 (2006) 613–627.
2006 | Journal Article | IST-REx-ID: 4235
Dynamic response of cancer under the influence of immunological activity and therapy
H. de Vladar, J. González, Journal of Theoretical Biology (2006) 91–109.
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H. de Vladar, J. González, Journal of Theoretical Biology (2006) 91–109.
2006 | Journal Article | IST-REx-ID: 4237
Density-dependence as a size-independent regulatory mechanism
H. de Vladar, Journal of Theoretical Biology 238 (2006) 245–256.
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H. de Vladar, Journal of Theoretical Biology 238 (2006) 245–256.
2006 | Journal Article | IST-REx-ID: 4248
The Hill-Robertson effect and the evolution of recombination
D. Roze, N.H. Barton, Genetics 173 (2006) 1793–1811.
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D. Roze, N.H. Barton, Genetics 173 (2006) 1793–1811.
2006 | Book Review | IST-REx-ID: 4250
Evolutionary Biology: How did the human species form?
N.H. Barton, Current Biology 16 (2006) 647–650.
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N.H. Barton, Current Biology 16 (2006) 647–650.
2006 | Journal Article | IST-REx-ID: 4345
Bibliothek 2.0 - Die Bibliothek der Zukunft?
P. Danowski, L. Heller, Bibliotheksdienst 40 (2006) 1250–1271.
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P. Danowski, L. Heller, Bibliotheksdienst 40 (2006) 1250–1271.
2006 | Journal Article | IST-REx-ID: 4351
SIMMAP: stochastic character mapping of discrete traits on phylogenies
J.P. Bollback, BMC Bioinformatics 7 (2006).
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J.P. Bollback, BMC Bioinformatics 7 (2006).
2006 | Journal Article | IST-REx-ID: 4352
Population structure of the malaria vector Anopheles darlingi in a malaria-endemic region of eastern Amazonian Brazil
J. Conn, J. Vineis, J.P. Bollback, D. Onyabe, R. Wilkerson, M. Povoa, The American Journal of Tropical Medicine and Hygiene 74 (2006) 798–806.
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J. Conn, J. Vineis, J.P. Bollback, D. Onyabe, R. Wilkerson, M. Povoa, The American Journal of Tropical Medicine and Hygiene 74 (2006) 798–806.
2006 | Conference Paper | IST-REx-ID: 4359
Field Constraint Analysis
T. Wies, V. Kuncak, P. Lam, A. Podelski, M. Rinard, in:, Springer, 2006, pp. 157–173.
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T. Wies, V. Kuncak, P. Lam, A. Podelski, M. Rinard, in:, Springer, 2006, pp. 157–173.
2006 | Conference Paper | IST-REx-ID: 4373
Real Time Temporal Logic: Past, Present, Future
O. Maler, D. Nickovic, A. Pnueli, in:, Springer, 2006, pp. 2–16.
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O. Maler, D. Nickovic, A. Pnueli, in:, Springer, 2006, pp. 2–16.
2006 | Conference Paper | IST-REx-ID: 4374
From MITL to Timed Automata
O. Maler, D. Nickovic, A. Pnueli, in:, Springer, 2006, pp. 274–289.
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O. Maler, D. Nickovic, A. Pnueli, in:, Springer, 2006, pp. 274–289.
2006 | Conference Paper | IST-REx-ID: 4401
Preserving Secrecy Under Refinement
R. Alur, P. Cerny, S. Zdancewic, in:, Springer, 2006, pp. 107–118.
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R. Alur, P. Cerny, S. Zdancewic, in:, Springer, 2006, pp. 107–118.
2006 | Conference Paper | IST-REx-ID: 4406
Antichains: A new algorithm for checking universality of finite automata
M. De Wulf, L. Doyen, T.A. Henzinger, J. Raskin, in:, Springer, 2006, pp. 17–30.
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| DOI
M. De Wulf, L. Doyen, T.A. Henzinger, J. Raskin, in:, Springer, 2006, pp. 17–30.
2006 | Book Chapter | IST-REx-ID: 11119
In Vitro Techniques
Harris JR, Almouzni G, Kirschner D, Dimitrova D, Nickerson JA, Underwood J, Wagner S, Korbei B, Foisner R, Walther TC, Hetzer M, Peters R, Walev I, de Kroon AIPM, Staffhorst RWHM, de Kruijff B, Burger KNJ, Netto LES, Bertrand E, Alimonti JB, Greenberg AH, Xiao J, Pradhan A, Liu Y, Paiement J, Young R, Goñi FM, Villar A-V, Contreras F-X, Alonso A, Peter BJ, Mills IG, Higgins MK, Brown WJ, Chambers K, Doody A, Cheng CY, Mruk DD, Yang C, Kirchhoff H, Haase W, Boggasch S, Paulsen H, Benesova J, Liffers S-T, Rögner M, Gao Y, Sztul E, Thiemann M, Fahimi HD, Gniadecki R, Gajkowska B, Bane SL, Hess JF, Voss JC, Fitzgerald PG, Hisanaga S, Sasaki T, Uéda K, Town T, Tan J, Milton NGN, Chi R, Keller TCS, Kriajevska M, Bronstein I, Lukanidin E, Holmes DF, Kadler KE. 2006.In Vitro Techniques. In: Cell Biology Protocols. , 201–378.
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Harris JR, Almouzni G, Kirschner D, Dimitrova D, Nickerson JA, Underwood J, Wagner S, Korbei B, Foisner R, Walther TC, Hetzer M, Peters R, Walev I, de Kroon AIPM, Staffhorst RWHM, de Kruijff B, Burger KNJ, Netto LES, Bertrand E, Alimonti JB, Greenberg AH, Xiao J, Pradhan A, Liu Y, Paiement J, Young R, Goñi FM, Villar A-V, Contreras F-X, Alonso A, Peter BJ, Mills IG, Higgins MK, Brown WJ, Chambers K, Doody A, Cheng CY, Mruk DD, Yang C, Kirchhoff H, Haase W, Boggasch S, Paulsen H, Benesova J, Liffers S-T, Rögner M, Gao Y, Sztul E, Thiemann M, Fahimi HD, Gniadecki R, Gajkowska B, Bane SL, Hess JF, Voss JC, Fitzgerald PG, Hisanaga S, Sasaki T, Uéda K, Town T, Tan J, Milton NGN, Chi R, Keller TCS, Kriajevska M, Bronstein I, Lukanidin E, Holmes DF, Kadler KE. 2006.In Vitro Techniques. In: Cell Biology Protocols. , 201–378.
2006 | Journal Article | IST-REx-ID: 11117
The role of the nuclear envelope in cellular organization
M.A. D’Angelo, M. Hetzer, Cellular and Molecular Life Sciences 63 (2006) 316–332.
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| DOI
| PubMed | Europe PMC
M.A. D’Angelo, M. Hetzer, Cellular and Molecular Life Sciences 63 (2006) 316–332.
2006 | Journal Article | IST-REx-ID: 11118
Nuclear pores form de novo from both sides of the nuclear envelope
M.A. D’Angelo, D.J. Anderson, E. Richard, M. Hetzer, Science 312 (2006) 440–443.
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| DOI
| PubMed | Europe PMC
M.A. D’Angelo, D.J. Anderson, E. Richard, M. Hetzer, Science 312 (2006) 440–443.