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302 Publications
2011 | Journal Article | IST-REx-ID: 2799
The onset of turbulence in pipe flow
K. Avila, D. Moxey, A. De Lózar, M. Avila, D. Barkley, B. Hof, Science 333 (2011) 192–196.
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K. Avila, D. Moxey, A. De Lózar, M. Avila, D. Barkley, B. Hof, Science 333 (2011) 192–196.
2011 | Journal Article | IST-REx-ID: 2800
Experimental investigation of laminar turbulent intermittency in pipe flow
D. Samanta, A. De Lózar, B. Hof, Journal of Fluid Mechanics 681 (2011) 193–204.
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D. Samanta, A. De Lózar, B. Hof, Journal of Fluid Mechanics 681 (2011) 193–204.
2011 | Conference Paper | IST-REx-ID: 2801
A Lagrangian approach to the interface velocity of turbulent puffs in pipe flow
M. Holzner, M. Avila, A. De Lózar, B. Hof, in:, IOP Publishing Ltd., 2011.
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M. Holzner, M. Avila, A. De Lózar, B. Hof, in:, IOP Publishing Ltd., 2011.
2011 | Journal Article | IST-REx-ID: 2871
Sending mixed messages: Auxin-cytokinin crosstalk in roots
A. Bishopp, E. Benková, Y. Helariutta, Current Opinion in Plant Biology 14 (2011) 10–16.
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A. Bishopp, E. Benková, Y. Helariutta, Current Opinion in Plant Biology 14 (2011) 10–16.
2011 | Journal Article | IST-REx-ID: 2874
Hierarchy of hormone action controlling apical hook development in Arabidopsis
J. Gallego Bartolomé, M. Arana, F. Vandenbussche, P. Žádníková, E. Minguet, V. Guardiola, D. Van Der Straeten, E. Benková, D. Alabadí, M. Blázquez, Plant Journal 67 (2011) 622–634.
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J. Gallego Bartolomé, M. Arana, F. Vandenbussche, P. Žádníková, E. Minguet, V. Guardiola, D. Van Der Straeten, E. Benková, D. Alabadí, M. Blázquez, Plant Journal 67 (2011) 622–634.
2011 | Journal Article | IST-REx-ID: 2897
Redundancy and the Evolution of Cis Regulatory Element Multiplicity
T. Paixao, R. Azevedo, PLoS Computational Biology 6 (2011).
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T. Paixao, R. Azevedo, PLoS Computational Biology 6 (2011).
2011 | Journal Article | IST-REx-ID: 2898
Sex ratio evolution under probabilistic sex determination
T. Paixao, S. Phadke, R. Azevedo, R. Zufall, Evolution; International Journal of Organic Evolution 65 (2011) 2050–2060.
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T. Paixao, S. Phadke, R. Azevedo, R. Zufall, Evolution; International Journal of Organic Evolution 65 (2011) 2050–2060.
2011 | Book Chapter | IST-REx-ID: 2922
Graph-cut Based Image Segmentation with Connectivity Priors
S. Vicente, V. Kolmogorov, C. Rother, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
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S. Vicente, V. Kolmogorov, C. Rother, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
2011 | Book Chapter | IST-REx-ID: 2923
Analyzing Convex Relaxations for MAP Estimation
M.P. Kumar, V. Kolmogorov, P. Torr, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
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M.P. Kumar, V. Kolmogorov, P. Torr, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
2011 | Book Chapter | IST-REx-ID: 2924
Bilayer Segmentation of Video
A. Criminisi, G. Cross, A. Blake, V. Kolmogorov, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
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A. Criminisi, G. Cross, A. Blake, V. Kolmogorov, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
2011 | Book Chapter | IST-REx-ID: 2925
Interactive Foreground Extraction using graph cut
C. Rother, V. Kolmogorov, Y. Boykov, A. Blake, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
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C. Rother, V. Kolmogorov, Y. Boykov, A. Blake, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
2011 | Book Chapter | IST-REx-ID: 2935
Basic graph cut algorithms
Y. Boykov, V. Kolmogorov, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011, pp. 31–50.
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Y. Boykov, V. Kolmogorov, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011, pp. 31–50.
2011 | Conference Paper | IST-REx-ID: 2960
Privacy Preserving GWAS Data Sharing
S. Fienberg, A. Slavkovic, C. Uhler, in:, IEEE, 2011.
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S. Fienberg, A. Slavkovic, C. Uhler, in:, IEEE, 2011.
2011 | Journal Article | IST-REx-ID: 2961 | 
Detecting epistasis via Markov bases
A. Malaspinas, C. Uhler, Journal of Algebraic Statistics 2 (2011) 36–53.
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A. Malaspinas, C. Uhler, Journal of Algebraic Statistics 2 (2011) 36–53.
2011 | Conference Paper | IST-REx-ID: 2975
A Framework for Practical Universally Composable Zero-Knowledge Protocols
J. Camenisch, S. Krenn, V. Shoup, in:, D. Lee, X. Wang (Eds.), Springer, 2011, pp. 449–467.
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J. Camenisch, S. Krenn, V. Shoup, in:, D. Lee, X. Wang (Eds.), Springer, 2011, pp. 449–467.
2011 | Conference Paper | IST-REx-ID: 2976
Cache Games - Bringing Access-Based Cache Attacks on AES to Practice
D. Gullasch, E. Bangerter, S. Krenn, in:, IEEE, 2011, pp. 490–505.
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D. Gullasch, E. Bangerter, S. Krenn, in:, IEEE, 2011, pp. 490–505.
2011 | Conference Paper | IST-REx-ID: 2977
cPLC - A Cryptographic Programming Language and Compiler
E. Bangerter, S. Krenn, M. Seifriz, U. Ultes Nitsche, in:, H. Venter, M. Coetzee, M. Loock (Eds.), IEEE, 2011.
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E. Bangerter, S. Krenn, M. Seifriz, U. Ultes Nitsche, in:, H. Venter, M. Coetzee, M. Loock (Eds.), IEEE, 2011.
2011 | Journal Article | IST-REx-ID: 3082
Competitive canalization of PIN dependent auxin flow from axillary buds controls pea bud outgrowth
J. Balla, P. Kalousek, V. Reinöhl, J. Friml, S. Procházka, Plant Journal 65 (2011) 571–577.
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J. Balla, P. Kalousek, V. Reinöhl, J. Friml, S. Procházka, Plant Journal 65 (2011) 571–577.
2011 | Journal Article | IST-REx-ID: 3083
ARF1 localizes to the golgi and the trans Golgi network
D. Robinson, D. Scheuring, S. Naramoto, J. Friml, Plant Cell 23 (2011) 846–849.
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D. Robinson, D. Scheuring, S. Naramoto, J. Friml, Plant Cell 23 (2011) 846–849.
2011 | Journal Article | IST-REx-ID: 3084
PIN polarity maintenance by the cell wall in Arabidopsis
E. Feraru, M. Feraru, J. Kleine Vehn, A. Martinière, G. Mouille, S. Vanneste, S. Vernhettes, J. Runions, J. Friml, Current Biology 21 (2011) 338–343.
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E. Feraru, M. Feraru, J. Kleine Vehn, A. Martinière, G. Mouille, S. Vanneste, S. Vernhettes, J. Runions, J. Friml, Current Biology 21 (2011) 338–343.
2011 | Journal Article | IST-REx-ID: 3085
Light-mediated polarization of the PIN3 auxin transporter for the phototropic response in Arabidopsis
Z. Ding, C. Galván Ampudia, E. Demarsy, Ł. Łangowski, J. Kleine Vehn, Y. Fan, M. Morita, M. Tasaka, C. Fankhauser, R. Offringa, J. Friml, Nature Cell Biology 13 (2011) 447–453.
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Z. Ding, C. Galván Ampudia, E. Demarsy, Ł. Łangowski, J. Kleine Vehn, Y. Fan, M. Morita, M. Tasaka, C. Fankhauser, R. Offringa, J. Friml, Nature Cell Biology 13 (2011) 447–453.
2011 | Journal Article | IST-REx-ID: 3086
Polar localized NPH3-like proteins regulate polarity and endocytosis of PIN-FORMED auxin efflux carriers
M. Furutani, N. Sakamoto, S. Yoshida, T. Kajiwara, H. Robert, J. Friml, M. Tasaka, Development 138 (2011) 2069–2078.
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M. Furutani, N. Sakamoto, S. Yoshida, T. Kajiwara, H. Robert, J. Friml, M. Tasaka, Development 138 (2011) 2069–2078.
2011 | Journal Article | IST-REx-ID: 3087
Clathrin mediates endocytosis and polar distribution of PIN auxin transporters in Arabidopsis
S. Kitakura, S. Vanneste, S. Robert, C. Löfke, T. Teichmann, H. Tanaka, J. Friml, Plant Cell 23 (2011) 1920–1931.
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S. Kitakura, S. Vanneste, S. Robert, C. Löfke, T. Teichmann, H. Tanaka, J. Friml, Plant Cell 23 (2011) 1920–1931.
2011 | Journal Article | IST-REx-ID: 3088
A mutually inhibitory interaction between auxin and cytokinin specifies vascular pattern in roots
A. Bishopp, H. Help, S. El Showk, D. Weijers, B. Scheres, J. Friml, E. Benková, A. Mähönen, Y. Helariutta, Current Biology 21 (2011) 917–926.
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A. Bishopp, H. Help, S. El Showk, D. Weijers, B. Scheres, J. Friml, E. Benková, A. Mähönen, Y. Helariutta, Current Biology 21 (2011) 917–926.
2011 | Journal Article | IST-REx-ID: 3089
Inositol trisphosphate-induced ca^2+ signaling modulates auxin transport and pin polarity
J. Zhang, S. Vanneste, P. Brewer, M. Michniewicz, P. Grones, J. Kleine Vehn, C. Löfke, T. Teichmann, A. Bielach, B. Cannoot, K. Hoyerová, X. Chen, H. Xue, E. Benková, E. Zažímalová, J. Friml, Developmental Cell 20 (2011) 855–866.
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J. Zhang, S. Vanneste, P. Brewer, M. Michniewicz, P. Grones, J. Kleine Vehn, C. Löfke, T. Teichmann, A. Bielach, B. Cannoot, K. Hoyerová, X. Chen, H. Xue, E. Benková, E. Zažímalová, J. Friml, Developmental Cell 20 (2011) 855–866.
2011 | Journal Article | IST-REx-ID: 3090
Cell plate restricted association of DRP1A and PIN proteins is required for cell polarity establishment in arabidopsis
J. Mravec, J. Petrášek, N. Li, S. Boeren, R. Karlova, S. Kitakura, M. Pařezová, S. Naramoto, T. Nodzyński, P. Dhonukshe, S. Bednarek, E. Zažímalová, S. De Vries, J. Friml, Current Biology 21 (2011) 1055–1060.
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J. Mravec, J. Petrášek, N. Li, S. Boeren, R. Karlova, S. Kitakura, M. Pařezová, S. Naramoto, T. Nodzyński, P. Dhonukshe, S. Bednarek, E. Zažímalová, S. De Vries, J. Friml, Current Biology 21 (2011) 1055–1060.
2011 | Journal Article | IST-REx-ID: 3091 |
Fleeting hormone cues get stabilized for plant organogenesis
M. Sauer, J. Friml, Molecular Systems Biology 7 (2011).
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| Download Published Version (ext.)
| PubMed | Europe PMC
M. Sauer, J. Friml, Molecular Systems Biology 7 (2011).
2011 | Journal Article | IST-REx-ID: 3092 |
Feedback models for polarized auxin transport: An emerging trend
K.T. Wabnik, W. Govaerts, J. Friml, J. Kleine Vehn, Molecular BioSystems 7 (2011) 2352–2359.
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| Download Published Version (ext.)
| PubMed | Europe PMC
K.T. Wabnik, W. Govaerts, J. Friml, J. Kleine Vehn, Molecular BioSystems 7 (2011) 2352–2359.
2011 | Journal Article | IST-REx-ID: 3093
Monoubiquitin dependent endocytosis of the Iron Regulated Transporter 1 IRT1 transporter controls iron uptake in plants
M. Barberon, E. Zelazny, S. Robert, G. Conéjéro, C. Curie, J. Friml, G. Vert, PNAS 108 (2011) E450–E458.
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M. Barberon, E. Zelazny, S. Robert, G. Conéjéro, C. Curie, J. Friml, G. Vert, PNAS 108 (2011) E450–E458.
2011 | Journal Article | IST-REx-ID: 3094
Polarization of PIN3 dependent auxin transport for hypocotyl gravitropic response in Arabidopsis thaliana
H. Rakusová, J. Gallego Bartolomé, M. Vanstraelen, H. Robert, D. Alabadí, M. Blázquez, E. Benková, J. Friml, Plant Journal 67 (2011) 817–826.
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H. Rakusová, J. Gallego Bartolomé, M. Vanstraelen, H. Robert, D. Alabadí, M. Blázquez, E. Benková, J. Friml, Plant Journal 67 (2011) 817–826.
2011 | Journal Article | IST-REx-ID: 3095
Auxin minimum defines a developmental window for lateral root initiation
J. Dubrovsky, S. Napsucialy Mendivil, J. Duclercq, Y. Cheng, S. Shishkova, M. Ivanchenko, J. Friml, A. Murphy, E. Benková, New Phytologist 191 (2011) 970–983.
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J. Dubrovsky, S. Napsucialy Mendivil, J. Duclercq, Y. Cheng, S. Shishkova, M. Ivanchenko, J. Friml, A. Murphy, E. Benková, New Phytologist 191 (2011) 970–983.
2011 | Journal Article | IST-REx-ID: 3096
Prototype cell-to-cell auxin transport mechanism by intracellular auxin compartmentalization
K.T. Wabnik, J. Kleine Vehn, W. Govaerts, J. Friml, Trends in Plant Science 16 (2011) 468–475.
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K.T. Wabnik, J. Kleine Vehn, W. Govaerts, J. Friml, Trends in Plant Science 16 (2011) 468–475.
2011 | Journal Article | IST-REx-ID: 3097
Cytokinin modulates endocytic trafficking of PIN1 auxin efflux carrier to control plant organogenesis
P. Marhavý, A. Bielach, L. Abas, A. Abuzeineh, J. Duclercq, H. Tanaka, M. Pařezová, J. Petrášek, J. Friml, J. Kleine Vehn, E. Benková, Developmental Cell 21 (2011) 796–804.
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P. Marhavý, A. Bielach, L. Abas, A. Abuzeineh, J. Duclercq, H. Tanaka, M. Pařezová, J. Petrášek, J. Friml, J. Kleine Vehn, E. Benková, Developmental Cell 21 (2011) 796–804.
2011 | Journal Article | IST-REx-ID: 3098
Recycling, clustering and endocytosis jointly maintain PIN auxin carrier polarity at the plasma membrane
J. Kleine Vehn, K.T. Wabnik, A. Martinière, Ł. Łangowski, K. Willig, S. Naramoto, J. Leitner, H. Tanaka, S. Jakobs, S. Robert, C. Luschnig, W. Govaerts, S. Hell, J. Runions, J. Friml, Molecular Systems Biology 7 (2011).
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J. Kleine Vehn, K.T. Wabnik, A. Martinière, Ł. Łangowski, K. Willig, S. Naramoto, J. Leitner, H. Tanaka, S. Jakobs, S. Robert, C. Luschnig, W. Govaerts, S. Hell, J. Runions, J. Friml, Molecular Systems Biology 7 (2011).
2011 | Journal Article | IST-REx-ID: 3099
Clusters of bioactive compounds target dynamic endomembrane networks in vivo
G. Drakakaki, S. Robert, A. Szatmári, M. Brown, S. Nagawa, D. Van Damme, M. Leonard, Z. Yang, T. Girke, S. Schmid, E. Russinova, J. Friml, N. Raikhel, G. Hicks, PNAS 108 (2011) 17850–17855.
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G. Drakakaki, S. Robert, A. Szatmári, M. Brown, S. Nagawa, D. Van Damme, M. Leonard, Z. Yang, T. Girke, S. Schmid, E. Russinova, J. Friml, N. Raikhel, G. Hicks, PNAS 108 (2011) 17850–17855.
2011 | Journal Article | IST-REx-ID: 3100 |
Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis
S. Vanneste, F. Coppens, E. Lee, T. Donner, Z. Xie, G. Van Isterdael, S. Dhondt, F. De Winter, B. De Rybel, M. Vuylsteke, L. De Veylder, J. Friml, D. Inzé, E. Grotewold, E. Scarpella, F. Sack, G. Beemster, T. Beeckman, EMBO Journal 30 (2011) 3430–3441.
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S. Vanneste, F. Coppens, E. Lee, T. Donner, Z. Xie, G. Van Isterdael, S. Dhondt, F. De Winter, B. De Rybel, M. Vuylsteke, L. De Veylder, J. Friml, D. Inzé, E. Grotewold, E. Scarpella, F. Sack, G. Beemster, T. Beeckman, EMBO Journal 30 (2011) 3430–3441.
2011 | Journal Article | IST-REx-ID: 3101 |
The AP 3 adaptor complex is required for vacuolar function in Arabidopsis
M. Zwiewka, E. Feraru, B. Möller, I. Hwang, M. Feraru, J. Kleine Vehn, D. Weijers, J. Friml, Cell Research 21 (2011) 1711–1722.
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M. Zwiewka, E. Feraru, B. Möller, I. Hwang, M. Feraru, J. Kleine Vehn, D. Weijers, J. Friml, Cell Research 21 (2011) 1711–1722.
2011 | Journal Article | IST-REx-ID: 3102
Auxin Dependent cell cycle reactivation through transcriptional regulation of arabidopsis E2Fa by lateral organ boundary proteins
B. Berckmans, V. Vassileva, S. Schmid, S. Maes, B. Parizot, S. Naramoto, Z. Magyar, C. Lessa Alvim Kamei, C. Koncz, L. Bögre, G. Persiau, G. De Jaeger, J. Friml, R. Simon, T. Beeckman, L. De Veyldera, Plant Cell 23 (2011) 3671–3683.
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B. Berckmans, V. Vassileva, S. Schmid, S. Maes, B. Parizot, S. Naramoto, Z. Magyar, C. Lessa Alvim Kamei, C. Koncz, L. Bögre, G. Persiau, G. De Jaeger, J. Friml, R. Simon, T. Beeckman, L. De Veyldera, Plant Cell 23 (2011) 3671–3683.
2011 | Journal Article | IST-REx-ID: 3103
Clathrin-mediated endocytosis: The gateway into plant cells
X. Chen, N. Irani, J. Friml, Current Opinion in Plant Biology 14 (2011) 674–682.
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X. Chen, N. Irani, J. Friml, Current Opinion in Plant Biology 14 (2011) 674–682.
2011 | Journal Article | IST-REx-ID: 3138
Relationships between hippocampal sharp waves ripples and fast gamma oscillation Influence of dentate and entorhinal cortical activity
D. Sullivan, J.L. Csicsvari, K. Mizuseki, S. Montgomery, K. Diba, G. Buzsáki, Journal of Neuroscience 31 (2011) 8605–8616.
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D. Sullivan, J.L. Csicsvari, K. Mizuseki, S. Montgomery, K. Diba, G. Buzsáki, Journal of Neuroscience 31 (2011) 8605–8616.
2011 | Journal Article | IST-REx-ID: 3145
Site specific integrase mediated transgenesis in mice via pronuclear injection
B. Tasic, S. Hippenmeyer, C. Wang, M. Gamboa, H. Zong, Y. Chen Tsai, L. Luo, PNAS 108 (2011) 7902–7907.
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B. Tasic, S. Hippenmeyer, C. Wang, M. Gamboa, H. Zong, Y. Chen Tsai, L. Luo, PNAS 108 (2011) 7902–7907.
2011 | Journal Article | IST-REx-ID: 3147
Mosaic analysis with double markers reveals tumor cell of origin in glioma
C. Liu, J. Sage, M. Miller, R. Verhaak, S. Hippenmeyer, H. Vogel, O. Foreman, R. Bronson, A. Nishiyama, L. Luo, H. Zong, Cell 146 (2011) 209–221.
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C. Liu, J. Sage, M. Miller, R. Verhaak, S. Hippenmeyer, H. Vogel, O. Foreman, R. Bronson, A. Nishiyama, L. Luo, H. Zong, Cell 146 (2011) 209–221.
2011 | Journal Article | IST-REx-ID: 3154
Peroxiredoxin stabilization of DE-cadherin promotes primordial germ cell adhesion
M. Degennaro, T. Hurd, D.E. Siekhaus, B. Biteau, H. Jasper, R. Lehmann, Developmental Cell 20 (2011) 233–243.
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M. Degennaro, T. Hurd, D.E. Siekhaus, B. Biteau, H. Jasper, R. Lehmann, Developmental Cell 20 (2011) 233–243.
2011 | Conference Paper | IST-REx-ID: 3163
Maximum margin multi-label structured prediction
C. Lampert, in:, Neural Information Processing Systems, 2011.
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C. Lampert, in:, Neural Information Processing Systems, 2011.
2011 | Conference Paper | IST-REx-ID: 3204
Submodularity on a tree: Unifying Submodularity on a tree: Unifying L-convex and bisubmodular functions convex and bisubmodular functions
V. Kolmogorov, in:, Springer, 2011, pp. 400–411.
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V. Kolmogorov, in:, Springer, 2011, pp. 400–411.
2011 | Conference Paper | IST-REx-ID: 3205
Dynamic tree block coordinate ascent
D. Tarlow, D. Batra, P. Kohli, V. Kolmogorov, in:, Omnipress, 2011, pp. 113–120.
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D. Tarlow, D. Batra, P. Kohli, V. Kolmogorov, in:, Omnipress, 2011, pp. 113–120.
2011 | Conference Paper | IST-REx-ID: 3206
Submodular decomposition framework for inference in associative Markov networks with global constraints
A. Osokin, D. Vetrov, V. Kolmogorov, in:, IEEE, 2011, pp. 1889–1896.
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A. Osokin, D. Vetrov, V. Kolmogorov, in:, IEEE, 2011, pp. 1889–1896.
2011 | Conference Paper | IST-REx-ID: 3207
Object cosegmentation
S. Vicente, C. Rother, V. Kolmogorov, in:, IEEE, 2011, pp. 2217–2224.
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| DOI
S. Vicente, C. Rother, V. Kolmogorov, in:, IEEE, 2011, pp. 2217–2224.
2011 | Conference Paper | IST-REx-ID: 3236
Parallel repetition for leakage resilience amplification revisited
A. Jain, K.Z. Pietrzak, in:, Springer, 2011, pp. 58–69.
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| DOI
A. Jain, K.Z. Pietrzak, in:, Springer, 2011, pp. 58–69.
2011 | Conference Paper | IST-REx-ID: 3238
Efficient authentication from hard learning problems
E. Kiltz, K.Z. Pietrzak, D. Cash, A. Jain, D. Venturi, in:, Springer, 2011, pp. 7–26.
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E. Kiltz, K.Z. Pietrzak, D. Cash, A. Jain, D. Venturi, in:, Springer, 2011, pp. 7–26.