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309 Publications


2011 | Conference Paper | IST-REx-ID: 3204
Kolmogorov, V. (2011). Submodularity on a tree: Unifying Submodularity on a tree: Unifying L-convex and bisubmodular functions convex and bisubmodular functions (Vol. 6907, pp. 400–411). Presented at the MFCS: Mathematical Foundations of Computer Science, Springer. https://doi.org/10.1007/978-3-642-22993-0_37
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2011 | Conference Paper | IST-REx-ID: 3206
Osokin, A., Vetrov, D., & Kolmogorov, V. (2011). Submodular decomposition framework for inference in associative Markov networks with global constraints (pp. 1889–1896). Presented at the CVPR: Computer Vision and Pattern Recognition, IEEE. https://doi.org/10.1109/CVPR.2011.5995361
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2011 | Conference Paper | IST-REx-ID: 3205
Tarlow, D., Batra, D., Kohli, P., & Kolmogorov, V. (2011). Dynamic tree block coordinate ascent (pp. 113–120). Presented at the ICML: International Conference on Machine Learning, Omnipress.
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2011 | Conference Paper | IST-REx-ID: 3207
Vicente, S., Rother, C., & Kolmogorov, V. (2011). Object cosegmentation (pp. 2217–2224). Presented at the CVPR: Computer Vision and Pattern Recognition, IEEE. https://doi.org/10.1109/CVPR.2011.5995530
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2011 | Conference Paper | IST-REx-ID: 3240
Barak, B., Dodis, Y., Krawczyk, H., Pereira, O., Pietrzak, K. Z., Standaert, F., & Yu, Y. (2011). Leftover hash lemma revisited (Vol. 6841, pp. 1–20). Presented at the CRYPTO: International Cryptology Conference, Springer. https://doi.org/ 10.1007/978-3-642-22792-9_1
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2011 | Conference Paper | IST-REx-ID: 3264
Gupta, A., Popeea, C., & Rybalchenko, A. (2011). Solving recursion-free Horn clauses over LI+UIF. In H. Yang (Ed.) (Vol. 7078, pp. 188–203). Presented at the APLAS: Asian Symposium on Programming Languages and Systems, Kenting, Taiwan: Springer. https://doi.org/10.1007/978-3-642-25318-8_16
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2011 | Conference Paper | IST-REx-ID: 3266
Ion, A., Carreira, J., & Sminchisescu, C. (2011). Probabilistic joint image segmentation and labeling. In NIPS Proceedings (Vol. 24, pp. 1827–1835). Granada, Spain: Neural Information Processing Systems Foundation.
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2011 | Journal Article | IST-REx-ID: 3269 | OA
Sheng, Y., Cutler, B., Chen, C., & Nasman, J. (2011). Perceptual global illumination cancellation in complex projection environments. Computer Graphics Forum. Wiley-Blackwell. https://doi.org/10.1111/j.1467-8659.2011.01985.x
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2011 | Journal Article | IST-REx-ID: 3267
Chen, C., & Freedman, D. (2011). Hardness results for homology localization. Discrete & Computational Geometry. Springer. https://doi.org/10.1007/s00454-010-9322-8
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2011 | Book Chapter | IST-REx-ID: 3268
Freedman, D., & Chen, C. (2011). Algebraic topology for computer vision. In Computer Vision (pp. 239–268). Nova Science Publishers.
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2011 | Journal Article | IST-REx-ID: 3288 | OA
Smutny, M., Wu, S., Gomez, G., Mangold, S., Yap, A., & Hamilton, N. (2011). Multicomponent analysis of junctional movements regulated by Myosin II isoforms at the epithelial zonula adherens. PLoS One. Public Library of Science. https://doi.org/10.1371/journal.pone.0022458
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2011 | Journal Article | IST-REx-ID: 3286
Weghuber, J., Aichinger, M., Brameshuber, M., Wieser, S., Ruprecht, V., Plochberger, B., … Schuetz, G. (2011). Cationic amphipathic peptides accumulate sialylated proteins and lipids in the plasma membrane of eukaryotic host cells. Biochimica et Biophysica Acta (BBA) - Biomembranes. Elsevier. https://doi.org/10.1016/j.bbamem.2011.06.007
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2011 | Journal Article | IST-REx-ID: 3287
Ruprecht, V., Axmann, M., Wieser, S., & Schuetz, G. (2011). What can we learn from single molecule trajectories? Current Protein & Peptide Science. Bentham Science Publishers. https://doi.org/10.2174/138920311798841753
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2011 | Journal Article | IST-REx-ID: 3285
Ruprecht, V., Wieser, S., Marguet, D., & Schuetz, G. (2011). Spot variation fluorescence correlation spectroscopy allows for superresolution chronoscopy of confinement times in membranes. Biophysical Journal. Biophysical Society. https://doi.org/10.1016/j.bpj.2011.04.035
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2011 | Conference Paper | IST-REx-ID: 3302 | OA
Henzinger, T. A., Singh, A., Singh, V., Wies, T., & Zufferey, D. (2011). Static scheduling in clouds (pp. 1–6). Presented at the HotCloud: Workshop on Hot Topics in Cloud Computing, USENIX.
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2011 | Conference Paper | IST-REx-ID: 3301 | OA
Henzinger, T. A., & Mateescu, M. (2011). Tail approximation for the chemical master equation. Presented at the WCSB: Workshop on Computational Systems Biology (TICSP), Tampere International Center for Signal Processing.
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2011 | Conference Paper | IST-REx-ID: 3299 | OA
Henzinger, T. A., & Mateescu, M. (2011). Propagation models for computing biochemical reaction networks (pp. 1–3). Presented at the CMSB: Computational Methods in Systems Biology, Paris, France: Springer. https://doi.org/10.1145/2037509.2037510
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2011 | Conference Paper | IST-REx-ID: 3316 | OA
Bloem, R., Chatterjee, K., Greimel, K., Henzinger, T. A., & Jobstmann, B. (2011). Specification-centered robustness. In 6th IEEE International Symposium on Industrial and Embedded Systems (pp. 176–185). Vasteras, Sweden: IEEE. https://doi.org/10.1109/SIES.2011.5953660
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2011 | Journal Article | IST-REx-ID: 3318 | OA
Eggermann, E., & Jonas, P. M. (2011). How the “slow” Ca(2+) buffer parvalbumin affects transmitter release in nanodomain coupling regimes at GABAergic synapses. Nature Neuroscience. Nature Publishing Group. https://doi.org/10.1038/nn.3002
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2011 | Book Chapter | IST-REx-ID: 3335 | OA
Van De Weygaert, R., Vegter, G., Edelsbrunner, H., Jones, B., Pranav, P., Park, C., … Teillaud, M. (2011). Alpha, Betti and the Megaparsec Universe: On the topology of the Cosmic Web. In M. Gavrilova, K. Tan, & M. Mostafavi (Eds.), Transactions on Computational Science XIV (Vol. 6970, pp. 60–101). Springer. https://doi.org/10.1007/978-3-642-25249-5_3
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2011 | Conference Paper | IST-REx-ID: 3329 | OA
Berberich, E., Halperin, D., Kerber, M., & Pogalnikova, R. (2011). Deconstructing approximate offsets. In Proceedings of the twenty-seventh annual symposium on Computational geometry (pp. 187–196). Paris, France: ACM. https://doi.org/10.1145/1998196.1998225
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2011 | Journal Article | IST-REx-ID: 3332 | OA
Kerber, M., & Sagraloff, M. (2011). A note on the complexity of real algebraic hypersurfaces. Graphs and Combinatorics. Springer. https://doi.org/10.1007/s00373-011-1020-7
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2011 | Conference Paper | IST-REx-ID: 3330 | OA
Kerber, M., & Sagraloff, M. (2011). Root refinement for real polynomials (pp. 209–216). Presented at the ISSAC: International Symposium on Symbolic and Algebraic Computation, California, USA: Springer. https://doi.org/10.1145/1993886.1993920
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2011 | Conference Paper | IST-REx-ID: 3328 | OA
Berberich, E., Hemmer, M., & Kerber, M. (2011). A generic algebraic kernel for non linear geometric applications (pp. 179–186). Presented at the SCG: Symposium on Computational Geometry, Paris, France: ACM. https://doi.org/10.1145/1998196.1998224
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2011 | Journal Article | IST-REx-ID: 3334
Edelsbrunner, H., Pach, J., & Ziegler, G. (2011). Letter from the new editors-in-chief. Discrete & Computational Geometry. Springer. https://doi.org/10.1007/s00454-010-9313-9
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2011 | Journal Article | IST-REx-ID: 3353 | OA
Tripakis, S., Lickly, B., Henzinger, T. A., & Lee, E. (2011). A theory of synchronous relational interfaces. ACM Transactions on Programming Languages and Systems (TOPLAS). ACM. https://doi.org/10.1145/1985342.1985345
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2011 | Conference Paper | IST-REx-ID: 3355 | OA
Halalai, R., Henzinger, T. A., & Singh, V. (2011). Quantitative evaluation of BFT protocols (pp. 255–264). Presented at the QEST: Quantitative Evaluation of Systems, Aachen, Germany: IEEE. https://doi.org/10.1109/QEST.2011.40
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2011 | Conference Paper | IST-REx-ID: 3350
Chatterjee, K., & Majumdar, R. (2011). Minimum attention controller synthesis for omega regular objectives. In U. Fahrenberg & S. Tripakis (Eds.) (Vol. 6919, pp. 145–159). Presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Aalborg, Denmark: Springer. https://doi.org/10.1007/978-3-642-24310-3_11
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2011 | Conference Paper | IST-REx-ID: 3351 | OA
Chatterjee, K., Doyen, L., & Singh, R. (2011). On memoryless quantitative objectives. In O. Owe, M. Steffen, & J. A. Telle (Eds.) (Vol. 6914, pp. 148–159). Presented at the FCT: Fundamentals of Computation Theory, Oslo, Norway: Springer. https://doi.org/10.1007/978-3-642-22953-4_13
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2011 | Journal Article | IST-REx-ID: 3354
Chatterjee, K., De Alfaro, L., & Henzinger, T. A. (2011). Qualitative concurrent parity games. ACM Transactions on Computational Logic (TOCL). ACM. https://doi.org/10.1145/1970398.1970404
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2011 | Conference Paper | IST-REx-ID: 3349 | OA
Chatterjee, K., & Fijalkow, N. (2011). A reduction from parity games to simple stochastic games (Vol. 54, pp. 74–86). Presented at the GandALF: Games, Automata, Logic, and Formal Verification, Minori, Italy: EPTCS. https://doi.org/10.4204/EPTCS.54.6
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2011 | Journal Article | IST-REx-ID: 335
Ibáñez, M., Fan, J., Li, W., Cadavid, D., Nafria, R., Carrete, A., & Cabot, A. (2011). Means and limits of control of the shell parameters in hollow nanoparticles obtained by the Kirkendall effect. Chemistry of Materials. American Chemical Society. https://doi.org/10.1021/cm2006633
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2011 | Journal Article | IST-REx-ID: 3352
Fisher, J., Harel, D., & Henzinger, T. A. (2011). Biology as reactivity. Communications of the ACM. ACM. https://doi.org/10.1145/2001269.2001289
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2011 | Conference Paper | IST-REx-ID: 3362 | OA
Fisher, J., Henzinger, T. A., Nickovic, D., Piterman, N., Singh, A., & Vardi, M. (2011). Dynamic reactive modules (Vol. 6901, pp. 404–418). Presented at the CONCUR: Concurrency Theory, Aachen, Germany: Schloss Dagstuhl - Leibniz-Zentrum für Informatik. https://doi.org/10.1007/978-3-642-23217-6_27
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2011 | Conference Paper | IST-REx-ID: 3365 | OA
Chatterjee, K., Henzinger, T. A., Jobstmann, B., & Singh, R. (2011). QUASY: quantitative synthesis tool (Vol. 6605, pp. 267–271). Presented at the TACAS: Tools and Algorithms for the Construction and Analysis of Systems, Saarbrucken, Germany: Springer. https://doi.org/10.1007/978-3-642-19835-9_24
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2011 | Conference Paper | IST-REx-ID: 3367
Chen, C., & Kerber, M. (2011). An output sensitive algorithm for persistent homology (pp. 207–216). Presented at the SoCG: Symposium on Computational Geometry, Paris, France: ACM. https://doi.org/10.1145/1998196.1998228
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2011 | Preprint | IST-REx-ID: 3363 | OA
Chatterjee, K., Henzinger, T. A., & Tracol, M. (n.d.). The decidability frontier for probabilistic automata on infinite words. ArXiv.
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2011 | Journal Article | IST-REx-ID: 3372 | OA
Abbot P et al. 2011. Inclusive fitness theory and eusociality. Nature. 471(7339), E1–E4.
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2011 | Journal Article | IST-REx-ID: 3371 | OA
Sixt, M. K., & Parent, C. (2011). Cells on the move in Philadelphia. Molecular Biology and Evolution. Oxford University Press. https://doi.org/10.1091/mbc.E10-12-0958
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2011 | Journal Article | IST-REx-ID: 3374 | OA
Tkačik, G., & Walczak, A. (2011). Information transmission in genetic regulatory networks a review. Journal of Physics: Condensed Matter. IOP Publishing Ltd. https://doi.org/10.1088/0953-8984/23/15/153102
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2011 | Journal Article | IST-REx-ID: 3368 | OA
Krens, G., Möllmert, S., & Heisenberg, C.-P. J. (2011). Enveloping cell layer differentiation at the surface of zebrafish germ layer tissue explants. PNAS. National Academy of Sciences. https://doi.org/10.1073/pnas.1010767108
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2011 | Journal Article | IST-REx-ID: 3370 | OA
Kupczok, A. (2011). Consequences of different null models on the tree shape bias of supertree methods. Systematic Biology. Oxford University Press. https://doi.org/10.1093/sysbio/syq086
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2011 | Journal Article | IST-REx-ID: 3369
Pernia-Andrade, A., & Jonas, P. M. (2011). The multiple faces of RIM. Neuron. Elsevier. https://doi.org/10.1016/j.neuron.2011.01.010
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2011 | Journal Article | IST-REx-ID: 3396 | OA
Stockinger, P., Heisenberg, C.-P. J., & Maître, J.-L. (2011). Defective neuroepithelial cell cohesion affects tangential branchiomotor neuron migration in the zebrafish neural tube. Development. Company of Biologists. https://doi.org/10.1242/dev.071233
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2011 | Journal Article | IST-REx-ID: 3394 | OA
Polechova, J., & Barton, N. H. (2011). Genetic drift widens the expected cline but narrows the expected cline width. Genetics. Genetics Society of America. https://doi.org/10.1534/genetics.111.129817
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2011 | Journal Article | IST-REx-ID: 3390 | OA
Barton, N. H., & Etheridge, A. (2011). The relation between reproductive value and genetic contribution. Genetics. Genetics Society of America. https://doi.org/10.1534/genetics.111.127555
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2011 | Journal Article | IST-REx-ID: 3391 | OA
de Vladar, H., & Barton, N. H. (2011). The contribution of statistical physics to evolutionary biology. Trends in Ecology and Evolution. Cell Press. https://doi.org/10.1016/j.tree.2011.04.002
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2011 | Journal Article | IST-REx-ID: 3397 | OA
Maître, J.-L., & Heisenberg, C.-P. J. (2011). The role of adhesion energy in controlling cell-cell contacts. Current Opinion in Cell Biology. Elsevier. https://doi.org/10.1016/j.ceb.2011.07.004
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2011 | Journal Article | IST-REx-ID: 3405 | OA
Janovjak, H. L., Sandoz, G., & Isacoff, E. (2011). Modern ionotropic glutamate receptor with a K+ selectivity signature sequence. Nature Communications. Nature Publishing Group. https://doi.org/10.1038/ncomms1231
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2011 | Journal Article | IST-REx-ID: 341
Li, W., Shavel, A., Guzman, R., Rubio Garcia, J., Flox, C., Fan, J., … Cabot, A. (2011). Morphology evolution of Cu2−xS nanoparticles: from spheres to dodecahedrons. Chemical Communications. Royal Society of Chemistry (RSC) . https://doi.org/10.1039/c1cc13803k
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