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329 Publications
2012 | Journal Article | IST-REx-ID: 826
Hormonal interactions in the regulation of plant development
M. Vanstraelen, E. Benková, Annual Review of Cell and Developmental Biology 28 (2012) 463–487.
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| DOI
M. Vanstraelen, E. Benková, Annual Review of Cell and Developmental Biology 28 (2012) 463–487.
2012 | Journal Article | IST-REx-ID: 829
Spatiotemporal regulation of lateral root organogenesis in Arabidopsis by cytokinin
A. Bielach, K. Podlesakova, P. Marhavý, J. Duclercq, C. Cuesta, B. Muller, W. Grunewald, P. Tarkowski, E. Benková, The Plant Cell 24 (2012) 3967–3981.
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| DOI
A. Bielach, K. Podlesakova, P. Marhavý, J. Duclercq, C. Cuesta, B. Muller, W. Grunewald, P. Tarkowski, E. Benková, The Plant Cell 24 (2012) 3967–3981.
2012 | Journal Article | IST-REx-ID: 846
Estimating the rate of irreversibility in protein evolution
O. Soylemez, F. Kondrashov, Genome Biology and Evolution 4 (2012) 1213–1222.
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| DOI
O. Soylemez, F. Kondrashov, Genome Biology and Evolution 4 (2012) 1213–1222.
2012 | Journal Article | IST-REx-ID: 8463
Optimal degree of protonation for 1H detection of aliphatic sites in randomly deuterated proteins as a function of the MAS frequency
S. Asami, K. Szekely, P. Schanda, B.H. Meier, B. Reif, Journal of Biomolecular NMR 54 (2012) 155–168.
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| DOI
S. Asami, K. Szekely, P. Schanda, B.H. Meier, B. Reif, Journal of Biomolecular NMR 54 (2012) 155–168.
2012 | Journal Article | IST-REx-ID: 8465
Site-resolved measurement of microsecond-to-millisecond conformational-exchange processes in proteins by solid-state NMR spectroscopy
M. Tollinger, A.C. Sivertsen, B.H. Meier, M. Ernst, P. Schanda, Journal of the American Chemical Society 134 (2012) 14800–14807.
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| DOI
M. Tollinger, A.C. Sivertsen, B.H. Meier, M. Ernst, P. Schanda, Journal of the American Chemical Society 134 (2012) 14800–14807.
2012 | Journal Article | IST-REx-ID: 8466
Real-time NMR characterization of structure and dynamics in a transiently populated protein folding intermediate
E. Rennella, T. Cutuil, P. Schanda, I. Ayala, V. Forge, B. Brutscher, Journal of the American Chemical Society 134 (2012) 8066–8069.
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E. Rennella, T. Cutuil, P. Schanda, I. Ayala, V. Forge, B. Brutscher, Journal of the American Chemical Society 134 (2012) 8066–8069.
2012 | Journal Article | IST-REx-ID: 8467
A supplementary coil for 2H decoupling with commercial HCN MAS probes
M. Huber, O. With, P. Schanda, R. Verel, M. Ernst, B.H. Meier, Journal of Magnetic Resonance 214 (2012) 76–80.
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| DOI
M. Huber, O. With, P. Schanda, R. Verel, M. Ernst, B.H. Meier, Journal of Magnetic Resonance 214 (2012) 76–80.
2012 | Journal Article | IST-REx-ID: 8502
An example of a nearly integrable Hamiltonian system with a trajectory dense in a set of maximal Hausdorff dimension
V. Kaloshin, M. Saprykina, Communications in Mathematical Physics 315 (2012) 643–697.
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| DOI
V. Kaloshin, M. Saprykina, Communications in Mathematical Physics 315 (2012) 643–697.
2012 | Journal Article | IST-REx-ID: 858
Stop codons in bacteria are not selectively equivalent
I. Povolotskaya, F. Kondrashov, A. Ledda, P. Vlasov, Biology Direct 7 (2012).
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| DOI
I. Povolotskaya, F. Kondrashov, A. Ledda, P. Vlasov, Biology Direct 7 (2012).
2012 | Journal Article | IST-REx-ID: 900
Epistasis as the primary factor in molecular evolution
M. Breen, C. Kemena, P. Vlasov, C. Notredame, F. Kondrashov, Nature 490 (2012) 535–538.
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| DOI
M. Breen, C. Kemena, P. Vlasov, C. Notredame, F. Kondrashov, Nature 490 (2012) 535–538.
2012 | Journal Article | IST-REx-ID: 9014 |

Dynamic clustering in active colloidal suspensions with chemical signaling
I. Theurkauff, C. Cottin-Bizonne, J.A. Palacci, C. Ybert, L. Bocquet, Physical Review Letters 108 (2012).
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| PubMed | Europe PMC
| arXiv
I. Theurkauff, C. Cottin-Bizonne, J.A. Palacci, C. Ybert, L. Bocquet, Physical Review Letters 108 (2012).
2012 | Journal Article | IST-REx-ID: 91
Identifying and evaluating organic nonlinear optical materials via molecular moments
A.P. Higginbotham, J. Cole, M. Blood Forsythe, D. Hickstein, Journal of Applied Physics 111 (2012).
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| DOI
A.P. Higginbotham, J. Cole, M. Blood Forsythe, D. Hickstein, Journal of Applied Physics 111 (2012).
2012 | Journal Article | IST-REx-ID: 9142 |

Detailed investigation of the self-aggregation of convection in cloud-resolving simulations
C.J. Muller, I.M. Held, Journal of the Atmospheric Sciences 69 (2012) 2551–2565.
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C.J. Muller, I.M. Held, Journal of the Atmospheric Sciences 69 (2012) 2551–2565.
2012 | Journal Article | IST-REx-ID: 9451 |

Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes
C.A. Ibarra, X. Feng, V.K. Schoft, T.-F. Hsieh, R. Uzawa, J.A. Rodrigues, A. Zemach, N. Chumak, A. Machlicova, T. Nishimura, D. Rojas, R.L. Fischer, H. Tamaru, D. Zilberman, Science 337 (2012) 1360–1364.
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| Download Published Version (ext.)
| PubMed | Europe PMC
C.A. Ibarra, X. Feng, V.K. Schoft, T.-F. Hsieh, R. Uzawa, J.A. Rodrigues, A. Zemach, N. Chumak, A. Machlicova, T. Nishimura, D. Rojas, R.L. Fischer, H. Tamaru, D. Zilberman, Science 337 (2012) 1360–1364.
2012 | Journal Article | IST-REx-ID: 9535 |

DNA methylation, H2A.Z, and the regulation of constitutive expression
D. Coleman-Derr, D. Zilberman, Cold Spring Harbor Symposia on Quantitative Biology 77 (2012) 147–154.
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D. Coleman-Derr, D. Zilberman, Cold Spring Harbor Symposia on Quantitative Biology 77 (2012) 147–154.
2012 | Journal Article | IST-REx-ID: 3246
Cell adhesion in embryo morphogenesis
V. Barone, C.-P.J. Heisenberg, Current Opinion in Cell Biology 24 (2012) 148–153.
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| DOI
V. Barone, C.-P.J. Heisenberg, Current Opinion in Cell Biology 24 (2012) 148–153.
2012 | Journal Article | IST-REx-ID: 3242 |

Social transfer of pathogenic fungus promotes active immunisation in ant colonies
M. Konrad, M. Vyleta, F. Theis, M. Stock, S. Tragust, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, PLoS Biology 10 (2012).
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| DOI
M. Konrad, M. Vyleta, F. Theis, M. Stock, S. Tragust, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, PLoS Biology 10 (2012).
2012 | Research Data Reference | IST-REx-ID: 9755 |

Data from: Social transfer of pathogenic fungus promotes active immunisation in ant colonies
M. Konrad, M. Vyleta, F. Theis, M. Stock, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, (2012).
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| Files available
| DOI
| Download Published Version (ext.)
M. Konrad, M. Vyleta, F. Theis, M. Stock, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, (2012).
2012 | Research Data Reference | IST-REx-ID: 9758 |

Data from: Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates
S. Aeschbacher, A. Futschik, M. Beaumont, (2012).
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S. Aeschbacher, A. Futschik, M. Beaumont, (2012).
2012 | Research Data Reference | IST-REx-ID: 9757 |

Data from: Ants disinfect fungus-exposed brood by oral uptake and spread of their poison
S. Tragust, B. Mitteregger, V. Barone, M. Konrad, L.V. Ugelvig, S. Cremer, (2012).
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S. Tragust, B. Mitteregger, V. Barone, M. Konrad, L.V. Ugelvig, S. Cremer, (2012).
2012 | Journal Article | IST-REx-ID: 8504
A Cr unimodal map with an arbitrary fast growth of the number of periodic points
V. Kaloshin, O.S. KOZLOVSKI, Ergodic Theory and Dynamical Systems 32 (2012) 159–165.
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| DOI
V. Kaloshin, O.S. KOZLOVSKI, Ergodic Theory and Dynamical Systems 32 (2012) 159–165.
2012 | Journal Article | IST-REx-ID: 8503
Finiteness of central configurations of five bodies in the plane
A. Albouy, V. Kaloshin, Annals of Mathematics 176 (2012) 535–588.
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| DOI
A. Albouy, V. Kaloshin, Annals of Mathematics 176 (2012) 535–588.
2012 | Journal Article | IST-REx-ID: 887
Gene duplication as a mechanism of genomic adaptation to a changing environment
F. Kondrashov, Proceedings of the Royal Society of London Series B Biological Sciences 279 (2012) 5048–5057.
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F. Kondrashov, Proceedings of the Royal Society of London Series B Biological Sciences 279 (2012) 5048–5057.
2012 | Journal Article | IST-REx-ID: 9049
Osmotic traps for colloids and macromolecules based on logarithmic sensing in salt taxis
J.A. Palacci, C. Cottin-Bizonne, C. Ybert, L. Bocquet, Soft Matter 8 (2012) 980–994.
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| DOI
J.A. Palacci, C. Cottin-Bizonne, C. Ybert, L. Bocquet, Soft Matter 8 (2012) 980–994.
2012 | Journal Article | IST-REx-ID: 922 |

Mechanical instabilities of biological tubes
E.B. Hannezo, J. Prost, J. Joanny, Physical Review Letters 109 (2012).
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| arXiv
E.B. Hannezo, J. Prost, J. Joanny, Physical Review Letters 109 (2012).
2012 | Journal Article | IST-REx-ID: 9499 |

EMF1 and PRC2 cooperate to repress key regulators of Arabidopsis development
S.Y. Kim, J. Lee, L. Eshed-Williams, D. Zilberman, Z.R. Sung, PLoS Genetics 8 (2012).
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S.Y. Kim, J. Lee, L. Eshed-Williams, D. Zilberman, Z.R. Sung, PLoS Genetics 8 (2012).
2012 | Journal Article | IST-REx-ID: 9497 |

Deposition of histone variant H2A.Z within gene bodies regulates responsive genes
D. Coleman-Derr, D. Zilberman, PLoS Genetics 8 (2012).
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| PubMed | Europe PMC
D. Coleman-Derr, D. Zilberman, PLoS Genetics 8 (2012).
2012 | Journal Article | IST-REx-ID: 9528
Regulation of biological accuracy, precision, and memory by plant chromatin organization
J.T. Huff, D. Zilberman, Current Opinion in Genetics and Development 22 (2012) 132–138.
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| PubMed | Europe PMC
J.T. Huff, D. Zilberman, Current Opinion in Genetics and Development 22 (2012) 132–138.
2012 | Journal Article | IST-REx-ID: 966 |

Paired chiral spin liquid with a Fermi surface in S=1 model on the triangular lattice
S. Bieri, M. Serbyn, T. Senthil, P. Lee, Physical Review B - Condensed Matter and Materials Physics 86 (2012).
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S. Bieri, M. Serbyn, T. Senthil, P. Lee, Physical Review B - Condensed Matter and Materials Physics 86 (2012).