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548 Publications


2019 | Journal Article | IST-REx-ID: 7711
Mitochondrial haplotypes affect metabolic phenotypes in the Drosophila Genetic Reference Panel
R.P.J. Bevers, M. Litovchenko, A. Kapopoulou, V.S. Braman, M.R. Robinson, J. Auwerx, B. Hollis, B. Deplancke, Nature Metabolism 1 (2019) 1226–1242.
View | Files available | DOI
 

2019 | Preprint | IST-REx-ID: 7782 | OA
Maximum likelihood method quantifies the overall contribution of gene-environment interaction to continuous traits: An application to complex traits in the UK Biobank
J. Sulc, N. Mounier, F. Günther, T. Winkler, A.R. Wood, T.M. Frayling, I.M. Heid, M.R. Robinson, Z. Kutalik, BioRxiv (2019).
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2019 | Journal Article | IST-REx-ID: 8013 | OA
Think: Theory for Africa
C.B. Currin, P.N. Khoza, A.D. Antrobus, P.E. Latham, T.P. Vogels, J.V. Raimondo, PLOS Computational Biology 15 (2019).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 8014 | OA
Neural mechanisms of attending to items in working memory
S.G. Manohar, N. Zokaei, S.J. Fallon, T.P. Vogels, M. Husain, Neuroscience and Biobehavioral Reviews 101 (2019) 1–12.
[Published Version] View | Files available | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Conference Paper | IST-REx-ID: 8175 | OA
New edge asymptotics of skew Young diagrams via free boundaries
D. Betea, J. Bouttier, P. Nejjar, M. Vuletíc, in:, Proceedings on the 31st International Conference on Formal Power Series and Algebraic Combinatorics, Formal Power Series and Algebraic Combinatorics, 2019.
[Preprint] View | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 8228 | OA
AllergoOncology: High innate IgE levels are decisive for the survival of cancer-bearing mice
J. Singer, G. Achatz-Straussberger, A. Bentley-Lukschal, J. Singer, G. Achatz, S.N. Karagiannis, E. Jensen-Jarolim, World Allergy Organization Journal 12 (2019).
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2019 | Journal Article | IST-REx-ID: 8229 | OA
Immune effects of the nitrated food allergen beta-lactoglobulin in an experimental food allergy model
A.S. Ondracek, D. Heiden, G.J. Oostingh, E. Fuerst, J. Singer, C. Bergmayr, J. Rohrhofer, E. Jensen-Jarolim, A. Duschl, E. Untersmayr, Nutrients 11 (2019).
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2019 | Journal Article | IST-REx-ID: 8227 | OA
AllergoOncology: Expression platform development and functional profiling of an anti‐HER2 IgE antibody
K.M. Ilieva, J. Singer, H.J. Bax, S. Crescioli, L. Montero‐Morales, S. Mele, H.S. Sow, C. Stavraka, D.H. Josephs, J.F. Spicer, H. Steinkellner, E. Jensen‐Jarolim, A.N.J. Tutt, S.N. Karagiannis, Allergy 74 (2019) 1985–1989.
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2019 | Journal Article | IST-REx-ID: 8263 | OA
Micro-evolution of three Streptococcus species: Selection, antigenic variation, and horizontal gene inflow
P.V. Shelyakin, O. Bochkareva, A.A. Karan, M.S. Gelfand, BMC Evolutionary Biology 19 (2019).
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2019 | Conference Paper | IST-REx-ID: 8296
Rethinking general-purpose decentralized computing
E.C. Alp, E. Kokoris Kogias, G. Fragkouli, B. Ford, in:, Proceedings of the Workshop on Hot Topics in Operating Systems, ACM, 2019, pp. 105–112.
View | DOI
 

2019 | Preprint | IST-REx-ID: 8304 | OA
SoK: Communication across distributed ledgers
A. Zamyatin, M. Al-Bassam, D. Zindros, E. Kokoris Kogias, P. Moreno-Sanchez, A. Kiayias, W.J. Knottenbelt, Cryptology EPrint Archive (n.d.).
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2019 | Preprint | IST-REx-ID: 8303 | OA
Robust and scalable consensus for sharded distributed ledgers
E. Kokoris Kogias, Cryptology EPrint Archive (n.d.).
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2019 | Thesis | IST-REx-ID: 8311 | OA
Secure, confidential blockchains providing high throughput and low latency
E. Kokoris Kogias, Secure, Confidential Blockchains Providing High Throughput and Low Latency, École Polytechnique Fédérale de Lausanne, 2019.
[Published Version] View | DOI | Download Published Version (ext.)
 

2019 | Preprint | IST-REx-ID: 8314 | OA
Brick: Asynchronous payment channels
G. Avarikioti, E. Kokoris Kogias, R. Wattenhofer, D. Zindros, ArXiv (n.d.).
[Preprint] View | Download Preprint (ext.) | arXiv
 

2019 | Preprint | IST-REx-ID: 8315 | OA
Divide and scale: Formalization of distributed ledger sharding protocols
G. Avarikioti, E. Kokoris Kogias, R. Wattenhofer, ArXiv (n.d.).
[Preprint] View | Download Preprint (ext.) | arXiv
 

2019 | Patent | IST-REx-ID: 8313 | OA
Methods and systems for secure data exchange
B. Ford, L. Gasser, E. Kokoris Kogias, P. Janovic, (2019).
[Published Version] View | Download Published Version (ext.)
 

2019 | Journal Article | IST-REx-ID: 8405 | OA
Integrated NMR and cryo-EM atomic-resolution structure determination of a half-megadalton enzyme complex
D.F. Gauto, L.F. Estrozi, C.D. Schwieters, G. Effantin, P. Macek, R. Sounier, A.C. Sivertsen, E. Schmidt, R. Kerfah, G. Mas, J.-P. Colletier, P. Güntert, A. Favier, G. Schoehn, P. Schanda, J. Boisbouvier, Nature Communications 10 (2019).
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 8406 | OA
Mechanism of the allosteric activation of the ClpP protease machinery by substrates and active-site inhibitors
J. Felix, K. Weinhäupl, C. Chipot, F. Dehez, A. Hessel, D.F. Gauto, C. Morlot, O. Abian, I. Gutsche, A. Velazquez-Campoy, P. Schanda, H. Fraga, Science Advances 5 (2019).
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2019 | Journal Article | IST-REx-ID: 8413
Mechanistic insights into microsecond time-scale motion of solid proteins using complementary 15N and 1H relaxation dispersion techniques
P. Rovó, C.A. Smith, D. Gauto, B.L. de Groot, P. Schanda, R. Linser, Journal of the American Chemical Society 141 (2019) 858–869.
[Submitted Version] View | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 8412
Conformational dynamics in the core of human Y145Stop prion protein amyloid probed by relaxation dispersion NMR
M.D. Shannon, T. Theint, D. Mukhopadhyay, K. Surewicz, W.K. Surewicz, D. Marion, P. Schanda, C.P. Jaroniec, ChemPhysChem 20 (2019) 311–317.
[Submitted Version] View | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 8411
Microsecond protein dynamics from combined Bloch-McConnell and Near-Rotary-Resonance R1p relaxation-dispersion MAS NMR
D. Marion, D.F. Gauto, I. Ayala, K. Giandoreggio-Barranco, P. Schanda, ChemPhysChem 20 (2019) 276–284.
[Submitted Version] View | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 8415 | OA
Marked length spectrum, homoclinic orbits and the geometry of open dispersing billiards
P. Bálint, J. De Simoi, V. Kaloshin, M. Leguil, Communications in Mathematical Physics 374 (2019) 1531–1575.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 8409
Studying intact bacterial peptidoglycan by proton-detected NMR spectroscopy at 100 kHz MAS frequency
C. Bougault, I. Ayala, W. Vollmer, J.-P. Simorre, P. Schanda, Journal of Structural Biology 206 (2019) 66–72.
[Submitted Version] View | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 8407
Relaxing with liquids and solids – A perspective on biomolecular dynamics
P. Schanda, Journal of Magnetic Resonance 306 (2019) 180–186.
[Submitted Version] View | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 8410 | OA
NMR for Biological Systems
P. Schanda, E.Y. Chekmenev, ChemPhysChem 20 (2019) 177–177.
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2019 | Conference Paper | IST-REx-ID: 8570 | OA
ARCH-COMP19 Category Report: Continuous and hybrid systems with linear continuous dynamics
M. Althoff, S. Bak, M. Forets, G. Frehse, N. Kochdumper, R. Ray, C. Schilling, S. Schupp, in:, EPiC Series in Computing, EasyChair, 2019, pp. 14–40.
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2019 | Journal Article | IST-REx-ID: 9016 | OA
Recognition of ASF1 by using hydrocarbon‐constrained peptides
M.M. Bakail, S. Rodriguez‐Marin, Z. Hegedüs, M.E. Perrin, F. Ochsenbein, A.J. Wilson, ChemBioChem 20 (2019) 891–895.
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2019 | Journal Article | IST-REx-ID: 9060 | OA
Activity-controlled annealing of colloidal monolayers
S. Ramananarivo, E. Ducrot, J.A. Palacci, Nature Communications 10 (2019).
[Published Version] View | Files available | DOI | PubMed | Europe PMC | arXiv
 

2019 | Journal Article | IST-REx-ID: 9460 | OA
DNA demethylation by ROS1a in rice vegetative cells promotes methylation in sperm
M.Y. Kim, A. Ono, S. Scholten, T. Kinoshita, D. Zilberman, T. Okamoto, R.L. Fischer, Proceedings of the National Academy of Sciences 116 (2019) 9652–9657.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 9689 | OA
Ab initio thermodynamics of liquid and solid water
B. Cheng, E.A. Engel, J. Behler, C. Dellago, M. Ceriotti, Proceedings of the National Academy of Sciences 116 (2019) 1110–1115.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC | arXiv
 

2019 | Journal Article | IST-REx-ID: 6819 | OA
Glyphosate does not substitute for glycine in proteins of actively dividing mammalian cells
M.N. Antoniou, A. Nicolas, R. Mesnage, M. Biserni, F.V. Rao, C.V. Martin, BMC Research Notes 12 (2019).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2019 | Research Data Reference | IST-REx-ID: 9784 | OA
MOESM1 of Glyphosate does not substitute for glycine in proteins of actively dividing mammalian cells
M.N. Antoniou, A. Nicolas, R. Mesnage, M. Biserni, F.V. Rao, C.V. Martin, (2019).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2019 | Research Data Reference | IST-REx-ID: 9839 | OA [Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2019 | Journal Article | IST-REx-ID: 8408
Aromatic ring dynamics, thermal activation, and transient conformations of a 468 kDa enzyme by specific 1H–13C labeling and fast magic-angle spinning NMR
D.F. Gauto, P. Macek, A. Barducci, H. Fraga, A. Hessel, T. Terauchi, D. Gajan, Y. Miyanoiri, J. Boisbouvier, R. Lichtenecker, M. Kainosho, P. Schanda, Journal of the American Chemical Society 141 (2019) 11183–11195.
[Submitted Version] View | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 8418 | OA
Asymptotic density of collision orbits in the Restricted Circular Planar 3 Body Problem
M. Guardia, V. Kaloshin, J. Zhang, Archive for Rational Mechanics and Analysis 233 (2019) 799–836.
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2019 | Journal Article | IST-REx-ID: 8416 | OA
On the finite dimensionality of integrable deformations of strictly convex integrable billiard tables
G. Huang, V. Kaloshin, Moscow Mathematical Journal 19 (2019) 307–327.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 8693 | OA
V. I. Arnold’s “pointwise” KAM theorem
L. Chierchia, E. Koudjinan, Regular and Chaotic Dynamics 24 (2019) 583–606.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 9018 | OA
Design on a rational basis of high-affinity peptides inhibiting the histone chaperone ASF1
Bakail MM, Gaubert A, Andreani J, Moal G, Pinna G, Boyarchuk E, Gaillard M-C, Courbeyrette R, Mann C, Thuret J-Y, Guichard B, Murciano B, Richet N, Poitou A, Frederic C, Le Du M-H, Agez M, Roelants C, Gurard-Levin ZA, Almouzni G, Cherradi N, Guerois R, Ochsenbein F. 2019. Design on a rational basis of high-affinity peptides inhibiting the histone chaperone ASF1. Cell Chemical Biology. 26(11), 1573–1585.e10.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 9530 | OA
DNA methylation is maintained with high fidelity in the honey bee germline and exhibits global non-functional fluctuations during somatic development
K.D. Harris, J.P.B. Lloyd, K. Domb, D. Zilberman, A. Zemach, Epigenetics and Chromatin 12 (2019).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2019 | Journal Article | IST-REx-ID: 9586 | OA
Anticoncentration for subgraph statistics
M.A. Kwan, B. Sudakov, T. Tran, Journal of the London Mathematical Society 99 (2019) 757–777.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 9580 | OA
Hypergraph cuts above the average
D. Conlon, J. Fox, M.A. Kwan, B. Sudakov, Israel Journal of Mathematics 233 (2019) 67–111.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 9585 | OA
Proof of a conjecture on induced subgraphs of Ramsey graphs
M.A. Kwan, B. Sudakov, Transactions of the American Mathematical Society 372 (2019) 5571–5594.
[Submitted Version] View | DOI | Download Submitted Version (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 9677 | OA
i-PI 2.0: A universal force engine for advanced molecular simulations
Kapil V, Rossi M, Marsalek O, Petraglia R, Litman Y, Spura T, Cheng B, Cuzzocrea A, Meißner RH, Wilkins DM, Helfrecht BA, Juda P, Bienvenue SP, Fang W, Kessler J, Poltavsky I, Vandenbrande S, Wieme J, Corminboeuf C, Kühne TD, Manolopoulos DE, Markland TE, Richardson JO, Tkatchenko A, Tribello GA, Van Speybroeck V, Ceriotti M. 2019. i-PI 2.0: A universal force engine for advanced molecular simulations. Computer Physics Communications. 236, 214–223.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2019 | Journal Article | IST-REx-ID: 9680 | OA
Iterative unbiasing of quasi-equilibrium sampling
F. Giberti, B. Cheng, G.A. Tribello, M. Ceriotti, Journal of Chemical Theory and Computation 16 (2019) 100–107.
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC | arXiv
 

2019 | Journal Article | IST-REx-ID: 12600 | OA
High‐resolution snowline delineation from Landsat imagery to infer snow cover controls in a Himalayan catchment
M. Girona‐Mata, E.S. Miles, S. Ragettli, F. Pellicciotti, Water Resources Research 55 (2019) 6754–6772.
[Published Version] View | DOI | Download Published Version (ext.)
 

2019 | Journal Article | IST-REx-ID: 12602 | OA
Modeling the response of the Langtang Glacier and the Hintereisferner to a changing climate since the Little Ice Age
R.R. Wijngaard, J.F. Steiner, P.D.A. Kraaijenbrink, C. Klug, S. Adhikari, A. Banerjee, F. Pellicciotti, L.P.H. van Beek, M.F.P. Bierkens, A.F. Lutz, W.W. Immerzeel, Frontiers in Earth Science 7 (2019).
[Published Version] View | DOI | Download Published Version (ext.)
 

2019 | Journal Article | IST-REx-ID: 12601 | OA
Supraglacial ice cliffs and ponds on debris-covered glaciers: Spatio-temporal distribution and characteristics
J.F. STEINER, P. BURI, E.S. MILES, S. RAGETTLI, F. Pellicciotti, Journal of Glaciology 65 (2019) 617–632.
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2019 | Journal Article | IST-REx-ID: 12192 | OA [Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2019 | Journal Article | IST-REx-ID: 12190
Natural variation in TBP-ASSOCIATED FACTOR 4b controls meiotic crossover and germline transcription in Arabidopsis
E.J. Lawrence, H. Gao, A.J. Tock, C. Lambing, A.R. Blackwell, X. Feng, I.R. Henderson, Current Biology 29 (2019) 2676–2686.e3.
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2019 | Preprint | IST-REx-ID: 8305 | OA
Bootstrapping consensus without trusted setup: fully asynchronous distributed key generation
E. Kokoris Kogias, A. Spiegelman, D. Malkhi, I. Abraham, Cryptology EPrint Archive (n.d.).
[Preprint] View | Download Preprint (ext.)
 

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