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7704 Publications
2017 | Journal Article | IST-REx-ID: 1336 |

Towards a runtime comparison of natural and artificial evolution
T. Paixao, J. Pérez Heredia, D. Sudholt, B. Trubenova, Algorithmica 78 (2017) 681–713.
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T. Paixao, J. Pérez Heredia, D. Sudholt, B. Trubenova, Algorithmica 78 (2017) 681–713.
2017 | Journal Article | IST-REx-ID: 1337 |

Universality for general Wigner-type matrices
O.H. Ajanki, L. Erdös, T.H. Krüger, Probability Theory and Related Fields 169 (2017) 667–727.
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O.H. Ajanki, L. Erdös, T.H. Krüger, Probability Theory and Related Fields 169 (2017) 667–727.
2017 | Journal Article | IST-REx-ID: 1338 |

From non-preemptive to preemptive scheduling using synchronization synthesis
P. Cerny, E. Clarke, T.A. Henzinger, A. Radhakrishna, L. Ryzhyk, R. Samanta, T. Tarrach, Formal Methods in System Design 50 (2017) 97–139.
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P. Cerny, E. Clarke, T.A. Henzinger, A. Radhakrishna, L. Ryzhyk, R. Samanta, T. Tarrach, Formal Methods in System Design 50 (2017) 97–139.
2017 | Journal Article | IST-REx-ID: 1351 |

Model checking the evolution of gene regulatory networks
M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, Acta Informatica 54 (2017) 765–787.
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M. Giacobbe, C.C. Guet, A. Gupta, T.A. Henzinger, T. Paixao, T. Petrov, Acta Informatica 54 (2017) 765–787.
2017 | Journal Article | IST-REx-ID: 1367 |

Adaptive physically based models in computer graphics
P. Manteaux, C.J. Wojtan, R. Narain, S. Redon, F. Faure, M. Cani, Computer Graphics Forum 36 (2017) 312–337.
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P. Manteaux, C.J. Wojtan, R. Narain, S. Redon, F. Faure, M. Cani, Computer Graphics Forum 36 (2017) 312–337.
2017 | Journal Article | IST-REx-ID: 1407 |

Temporal logic control for stochastic linear systems using abstraction refinement of probabilistic games
M. Svoreňová, J. Kretinsky, M. Chmelik, K. Chatterjee, I. Cěrná, C. Belta, Nonlinear Analysis: Hybrid Systems 23 (2017) 230–253.
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M. Svoreňová, J. Kretinsky, M. Chmelik, K. Chatterjee, I. Cěrná, C. Belta, Nonlinear Analysis: Hybrid Systems 23 (2017) 230–253.
2017 | Conference Paper | IST-REx-ID: 1000 |

PixelCNN models with auxiliary variables for natural image modeling
A. Kolesnikov, C. Lampert, in:, 34th International Conference on Machine Learning, JMLR, 2017, pp. 1905–1914.
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A. Kolesnikov, C. Lampert, in:, 34th International Conference on Machine Learning, JMLR, 2017, pp. 1905–1914.
2017 | Conference Paper | IST-REx-ID: 1001 |

CurveUps: Shaping objects from flat plates with tension-actuated curvature
R. Guseinov, E. Miguel, B. Bickel, in:, ACM, 2017.
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R. Guseinov, E. Miguel, B. Bickel, in:, ACM, 2017.
2017 | Conference Paper | IST-REx-ID: 1002 |

Functionality-aware retargeting of mechanisms to 3D shapes
R. Zhang, T. Auzinger, D. Ceylan, W. Li, B. Bickel, in:, ACM, 2017.
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R. Zhang, T. Auzinger, D. Ceylan, W. Li, B. Bickel, in:, ACM, 2017.
2017 | Conference Paper | IST-REx-ID: 1003 |

An abstraction-refinement methodology for reasoning about network games
G. Avni, S. Guha, O. Kupferman, in:, AAAI Press, 2017, pp. 70–76.
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G. Avni, S. Guha, O. Kupferman, in:, AAAI Press, 2017, pp. 70–76.
2017 | Journal Article | IST-REx-ID: 1004 |

Spatiotemporal mechanisms of root branching
K. Ötvös, E. Benková, Current Opinion in Genetics & Development 45 (2017) 82–89.
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K. Ötvös, E. Benková, Current Opinion in Genetics & Development 45 (2017) 82–89.
2017 | Journal Article | IST-REx-ID: 1007 |

Zeros of nonlinear systems with input invariances
M. Lang, E. Sontag, Automatica 81C (2017) 46–55.
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M. Lang, E. Sontag, Automatica 81C (2017) 46–55.
2017 | Conference Paper | IST-REx-ID: 1009 |

Optimizing expectation with guarantees in POMDPs
K. Chatterjee, P. Novotný, G. Pérez, J. Raskin, D. Zikelic, in:, Proceedings of the 31st AAAI Conference on Artificial Intelligence, AAAI Press, 2017, pp. 3725–3732.
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K. Chatterjee, P. Novotný, G. Pérez, J. Raskin, D. Zikelic, in:, Proceedings of the 31st AAAI Conference on Artificial Intelligence, AAAI Press, 2017, pp. 3725–3732.
2017 | Journal Article | IST-REx-ID: 1010 |

Local law for random Gram matrices
J. Alt, L. Erdös, T.H. Krüger, Electronic Journal of Probability 22 (2017).
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| arXiv
J. Alt, L. Erdös, T.H. Krüger, Electronic Journal of Probability 22 (2017).
2017 | Conference Paper | IST-REx-ID: 1011 |

Faster algorithms for weighted recursive state machines
K. Chatterjee, B. Kragl, S. Mishra, A. Pavlogiannis, in:, H. Yang (Ed.), Springer, 2017, pp. 287–313.
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K. Chatterjee, B. Kragl, S. Mishra, A. Pavlogiannis, in:, H. Yang (Ed.), Springer, 2017, pp. 287–313.
2017 | Journal Article | IST-REx-ID: 10126 |

Curvature mediated interactions in highly curved membranes
A. Vahid Belarghou, A. Šarić, T. Idema, Biophysical Journal 112 (2017).
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A. Vahid Belarghou, A. Šarić, T. Idema, Biophysical Journal 112 (2017).
2017 | Journal Article | IST-REx-ID: 1014 |

Liouville principles and a large-scale regularity theory for random elliptic operators on the half-space
J.L. Fischer, C. Raithel, SIAM Journal on Mathematical Analysis 49 (2017) 82–114.
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J.L. Fischer, C. Raithel, SIAM Journal on Mathematical Analysis 49 (2017) 82–114.
2017 | Journal Article | IST-REx-ID: 1015 |

Vortices and antivortices in two-dimensional ultracold Fermi gases
G. Bighin, L. Salasnich, Scientific Reports 7 (2017).
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G. Bighin, L. Salasnich, Scientific Reports 7 (2017).
2017 | Journal Article | IST-REx-ID: 1016
Uner Tan syndrome caused by a homozygous TUBB2B mutation affecting microtubule stability
M. Breuss, T. Nguyen, A. Srivatsan, I. Leca, G. Tian, T. Fritz, A.H. Hansen, D. Musaev, J. Mcevoy Venneri, J. Kiely, R. Rosti, E. Scott, U. Tan, R. Kolodner, N. Cowan, D. Keays, J. Gleeson, Human Molecular Genetics 26 (2017) 258–269.
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M. Breuss, T. Nguyen, A. Srivatsan, I. Leca, G. Tian, T. Fritz, A.H. Hansen, D. Musaev, J. Mcevoy Venneri, J. Kiely, R. Rosti, E. Scott, U. Tan, R. Kolodner, N. Cowan, D. Keays, J. Gleeson, Human Molecular Genetics 26 (2017) 258–269.
2017 | Journal Article | IST-REx-ID: 1017 |

Tubulins and brain development: The origins of functional specification
M. Breuss, I. Leca, T. Gstrein, A.H. Hansen, D. Keays, Molecular and Cellular Neuroscience 84 (2017) 58–67.
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M. Breuss, I. Leca, T. Gstrein, A.H. Hansen, D. Keays, Molecular and Cellular Neuroscience 84 (2017) 58–67.
2017 | Journal Article | IST-REx-ID: 10175 |

Homogenization of nonconvex unbounded singular integrals
O. Anza Hafsa, N. Clozeau, J.-P. Mandallena, Annales Mathématiques Blaise Pascal 24 (2017) 135–193.
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O. Anza Hafsa, N. Clozeau, J.-P. Mandallena, Annales Mathématiques Blaise Pascal 24 (2017) 135–193.
2017 | Journal Article | IST-REx-ID: 1018
Light regulated expression of sensor histidine kinase CKI1 controls cytokinin related development
T. Dobisova, V. Hrdinova, C. Cuesta, S. Michlickova, I. Urbankova, R. Hejatkova, P. Zadnikova, M. Pernisová, E. Benková, J. Hejátko, Plant Physiology 174 (2017) 387–404.
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T. Dobisova, V. Hrdinova, C. Cuesta, S. Michlickova, I. Urbankova, R. Hejatkova, P. Zadnikova, M. Pernisová, E. Benková, J. Hejátko, Plant Physiology 174 (2017) 387–404.
2017 | Journal Article | IST-REx-ID: 1020 |

Disordered cellulose based nanostructures for enhanced light scattering
S. Caixeiro, M. Peruzzo, O. Onelli, S. Vignolini, R. Sapienza, ACS Applied Materials and Interfaces 9 (2017) 7885–7890.
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S. Caixeiro, M. Peruzzo, O. Onelli, S. Vignolini, R. Sapienza, ACS Applied Materials and Interfaces 9 (2017) 7885–7890.
2017 | Journal Article | IST-REx-ID: 1021 |

Boundary layer turbulence in experiments on quasi Keplerian flows
J.M. Lopez Alonso, M. Avila, Journal of Fluid Mechanics 817 (2017) 21–34.
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J.M. Lopez Alonso, M. Avila, Journal of Fluid Mechanics 817 (2017) 21–34.
2017 | Journal Article | IST-REx-ID: 1022 |

The topology of the cosmic web in terms of persistent Betti numbers
P. Pranav, H. Edelsbrunner, R. Van De Weygaert, G. Vegter, M. Kerber, B. Jones, M. Wintraecken, Monthly Notices of the Royal Astronomical Society 465 (2017) 4281–4310.
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P. Pranav, H. Edelsbrunner, R. Van De Weygaert, G. Vegter, M. Kerber, B. Jones, M. Wintraecken, Monthly Notices of the Royal Astronomical Society 465 (2017) 4281–4310.
2017 | Journal Article | IST-REx-ID: 1023 |

Local law for the product of independent non-Hermitian random matrices with independent entries
Y. Nemish, Electronic Journal of Probability 22 (2017).
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Y. Nemish, Electronic Journal of Probability 22 (2017).
2017 | Journal Article | IST-REx-ID: 1025
Cell biology: Stretched divisions
C.-P.J. Heisenberg, Nature 543 (2017) 43–44.
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| DOI
C.-P.J. Heisenberg, Nature 543 (2017) 43–44.
2017 | Journal Article | IST-REx-ID: 103 |

Transport signatures of quasiparticle poisoning in a majorana island
S.M. Albrecht, E. Hansen, A.P. Higginbotham, F. Kuemmeth, T. Jespersen, J. Nygård, P. Krogstrup, J. Danon, K. Flensberg, C. Marcus, APS Physics, Physical Review Letters 118 (2017).
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S.M. Albrecht, E. Hansen, A.P. Higginbotham, F. Kuemmeth, T. Jespersen, J. Nygård, P. Krogstrup, J. Danon, K. Flensberg, C. Marcus, APS Physics, Physical Review Letters 118 (2017).
2017 | Journal Article | IST-REx-ID: 1030 |

Ein freies Bibliothekssystem für wissenschaftliche Bibliotheken – Werkstattbericht der IST Austria Library
M. Villányi, Informationspraxis 3 (2017).
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M. Villányi, Informationspraxis 3 (2017).
2017 | Journal Article | IST-REx-ID: 10369 |

Long-range organization of membrane-curving proteins
M. Simunovic, A. Šarić, J.M. Henderson, K.Y.C. Lee, G.A. Voth, ACS Central Science 3 (2017) 1246–1253.
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M. Simunovic, A. Šarić, J.M. Henderson, K.Y.C. Lee, G.A. Voth, ACS Central Science 3 (2017) 1246–1253.
2017 | Journal Article | IST-REx-ID: 10370 |

Mechanical force induces mitochondrial fission
S.C.J. Helle, Q. Feng, M.J. Aebersold, L. Hirt, R.R. Grüter, A. Vahid, A. Sirianni, S. Mostowy, J.G. Snedeker, A. Šarić, T. Idema, T. Zambelli, B. Kornmann, ELife 6 (2017).
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S.C.J. Helle, Q. Feng, M.J. Aebersold, L. Hirt, R.R. Grüter, A. Vahid, A. Sirianni, S. Mostowy, J.G. Snedeker, A. Šarić, T. Idema, T. Zambelli, B. Kornmann, ELife 6 (2017).
2017 | Journal Article | IST-REx-ID: 10373 |

Numerical evidence for thermally induced monopoles
P. Wirnsberger, D. Fijan, R.A. Lightwood, A. Šarić, C. Dellago, D. Frenkel, Proceedings of the National Academy of Sciences 114 (2017) 4911–4914.
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P. Wirnsberger, D. Fijan, R.A. Lightwood, A. Šarić, C. Dellago, D. Frenkel, Proceedings of the National Academy of Sciences 114 (2017) 4911–4914.
2017 | Journal Article | IST-REx-ID: 10374 |

Scaling behaviour and rate-determining steps in filamentous self-assembly
G. Meisl, L. Rajah, S.A.I. Cohen, M. Pfammatter, A. Šarić, E. Hellstrand, A.K. Buell, A. Aguzzi, S. Linse, M. Vendruscolo, C.M. Dobson, T.P.J. Knowles, Chemical Science 8 (2017) 7087–7097.
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G. Meisl, L. Rajah, S.A.I. Cohen, M. Pfammatter, A. Šarić, E. Hellstrand, A.K. Buell, A. Aguzzi, S. Linse, M. Vendruscolo, C.M. Dobson, T.P.J. Knowles, Chemical Science 8 (2017) 7087–7097.
2017 | Journal Article | IST-REx-ID: 10375 |

Curvature variation controls particle aggregation on fluid vesicles
A. Vahid, A. Šarić, T. Idema, Soft Matter 13 (2017) 4924–4930.
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| arXiv
A. Vahid, A. Šarić, T. Idema, Soft Matter 13 (2017) 4924–4930.
2017 | Journal Article | IST-REx-ID: 10416 |

Optimal Dyck reachability for data-dependence and Alias analysis
K. Chatterjee, B. Choudhary, A. Pavlogiannis, Proceedings of the ACM on Programming Languages 2 (2017).
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| arXiv
K. Chatterjee, B. Choudhary, A. Pavlogiannis, Proceedings of the ACM on Programming Languages 2 (2017).
2017 | Journal Article | IST-REx-ID: 10417 |

Data-centric dynamic partial order reduction
M. Chalupa, K. Chatterjee, A. Pavlogiannis, N. Sinha, K. Vaidya, Proceedings of the ACM on Programming Languages 2 (2017).
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M. Chalupa, K. Chatterjee, A. Pavlogiannis, N. Sinha, K. Vaidya, Proceedings of the ACM on Programming Languages 2 (2017).
2017 | Journal Article | IST-REx-ID: 10418 |

A new proof rule for almost-sure termination
A. Mciver, C. Morgan, B.L. Kaminski, J.P. Katoen, Proceedings of the ACM on Programming Languages 2 (2017).
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| arXiv
A. Mciver, C. Morgan, B.L. Kaminski, J.P. Katoen, Proceedings of the ACM on Programming Languages 2 (2017).
2017 | Journal Article | IST-REx-ID: 2016 |

Exact goodness-of-fit testing for the Ising model
A. Martin Del Campo Sanchez, S.A. Cepeda Humerez, C. Uhler, Scandinavian Journal of Statistics 44 (2017) 285–306.
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A. Martin Del Campo Sanchez, S.A. Cepeda Humerez, C. Uhler, Scandinavian Journal of Statistics 44 (2017) 285–306.
2017 | Journal Article | IST-REx-ID: 265
Rational curves on smooth hypersurfaces of low degree
T.D. Browning, P. Vishe, Geometric Methods in Algebra and Number Theory 11 (2017) 1657–1675.
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T.D. Browning, P. Vishe, Geometric Methods in Algebra and Number Theory 11 (2017) 1657–1675.
2017 | Journal Article | IST-REx-ID: 266 |

Forms in many variables and differing degrees
T.D. Browning, R. Heath Brown, Journal of the European Mathematical Society 19 (2017) 357–394.
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T.D. Browning, R. Heath Brown, Journal of the European Mathematical Society 19 (2017) 357–394.
2017 | Journal Article | IST-REx-ID: 267
Many cubic surfaces contain rational points
T.D. Browning, Mathematika 63 (2017) 818–839.
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| DOI
T.D. Browning, Mathematika 63 (2017) 818–839.
2017 | Journal Article | IST-REx-ID: 268 |

A transference approach to a Roth-type theorem in the squares
T.D. Browning, S. Prendiville, International Mathematics Research Notices 2017 (2017) 2219–2248.
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T.D. Browning, S. Prendiville, International Mathematics Research Notices 2017 (2017) 2219–2248.
2017 | Journal Article | IST-REx-ID: 269 |

Varieties with too many rational points
T.D. Browning, D. Loughran, Mathematische Zeitschrift 285 (2017) 1249–1267.
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| arXiv
T.D. Browning, D. Loughran, Mathematische Zeitschrift 285 (2017) 1249–1267.
2017 | Journal Article | IST-REx-ID: 270 |

Power-free values of polynomials on symmetric varieties
T.D. Browning, A. Gorodnik, Proceedings of the London Mathematical Society 114 (2017) 1044–1080.
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T.D. Browning, A. Gorodnik, Proceedings of the London Mathematical Society 114 (2017) 1044–1080.
2017 | Journal Article | IST-REx-ID: 271 |

Improvements in Birch's theorem on forms in many variables
T.D. Browning, S. Prendiville, Journal Fur Die Reine Und Angewandte Mathematik 2017 (2017) 203–234.
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T.D. Browning, S. Prendiville, Journal Fur Die Reine Und Angewandte Mathematik 2017 (2017) 203–234.
2017 | Journal Article | IST-REx-ID: 272 |

Norm forms for arbitrary number fields as products of linear polynomials
T.D. Browning, L. Matthiesen, Annales Scientifiques de l’Ecole Normale Superieure 50 (2017) 1383–1446.
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T.D. Browning, L. Matthiesen, Annales Scientifiques de l’Ecole Normale Superieure 50 (2017) 1383–1446.
2017 | Conference Paper | IST-REx-ID: 274 |

A faster approximation algorithm for the Gibbs partition function
V. Kolmogorov, in:, Proceedings of the 31st Conference On Learning Theory, PMLR, 2017, pp. 228–249.
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| arXiv
V. Kolmogorov, in:, Proceedings of the 31st Conference On Learning Theory, PMLR, 2017, pp. 228–249.
2017 | Journal Article | IST-REx-ID: 93 |

Reconfigurable re-entrant cavity for wireless coupling to an electro-optomechanical device
T. Menke, P. Burns, A.P. Higginbotham, N.S. Kampel, R. Peterson, K. Cicak, R. Simmonds, C. Regal, K. Lehnert, Review of Scientific Instruments 88 (2017).
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T. Menke, P. Burns, A.P. Higginbotham, N.S. Kampel, R. Peterson, K. Cicak, R. Simmonds, C. Regal, K. Lehnert, Review of Scientific Instruments 88 (2017).
2017 | Journal Article | IST-REx-ID: 934
Identity and dynamics of mammary stem cells during branching morphogenesis
C. Scheele, E.B. Hannezo, M. Muraro, A. Zomer, N. Langedijk, A. Van Oudenaarden, B. Simons, J. Van Rheenen, Nature 542 (2017) 313–317.
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| DOI
C. Scheele, E.B. Hannezo, M. Muraro, A. Zomer, N. Langedijk, A. Van Oudenaarden, B. Simons, J. Van Rheenen, Nature 542 (2017) 313–317.
2017 | Journal Article | IST-REx-ID: 936
RhoA regulates actin network dynamics during apical surface emergence in multiciliated epithelial cells
J. Sedzinski, E.B. Hannezo, F. Tu, M. Biro, J. Wallingford, Journal of Cell Science 130 (2017).
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J. Sedzinski, E.B. Hannezo, F. Tu, M. Biro, J. Wallingford, Journal of Cell Science 130 (2017).
2017 | Journal Article | IST-REx-ID: 937
Transmission of cytokinesis forces via E cadherin dilution and actomyosin flows
D. Pinheiro, E.B. Hannezo, S. Herszterg, F. Bosveld, I. Gaugué, M. Balakireva, Z. Wang, I. Cristo, S. Rigaud, O. Markova, Y. Bellaïche, Nature 545 (2017) 103–107.
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| DOI
D. Pinheiro, E.B. Hannezo, S. Herszterg, F. Bosveld, I. Gaugué, M. Balakireva, Z. Wang, I. Cristo, S. Rigaud, O. Markova, Y. Bellaïche, Nature 545 (2017) 103–107.
2017 | Thesis | IST-REx-ID: 938 |

Investigations into cell polarity and trafficking in the plant model Arabidopsis thaliana
M. Adamowski, Investigations into Cell Polarity and Trafficking in the Plant Model Arabidopsis Thaliana , IST Austria, 2017.
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M. Adamowski, Investigations into Cell Polarity and Trafficking in the Plant Model Arabidopsis Thaliana , IST Austria, 2017.
2017 | Journal Article | IST-REx-ID: 939 |

Waveguides with absorbing boundaries: Nonlinearity controlled by an exceptional point and solitons
B. Midya, V. Konotop, Physical Review Letters 119 (2017).
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B. Midya, V. Konotop, Physical Review Letters 119 (2017).
2017 | Journal Article | IST-REx-ID: 94 |

Breaking Lorentz reciprocity with frequency conversion and delay
E. Rosenthal, B. Chapman, A.P. Higginbotham, J. Kerckhoff, K. Lehnert, APS Physics, Physical Review Letters 119 (2017).
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| arXiv
E. Rosenthal, B. Chapman, A.P. Higginbotham, J. Kerckhoff, K. Lehnert, APS Physics, Physical Review Letters 119 (2017).
2017 | Conference Paper | IST-REx-ID: 941
JFIX: Semantics-based repair of Java programs via symbolic PathFinder
X. Le, D.H. Chu, D. Lo, C. Le Goues, W. Visser, in:, Proceedings of the 26th ACM SIGSOFT International Symposium on Software Testing and Analysis, ACM, 2017, pp. 376–379.
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X. Le, D.H. Chu, D. Lo, C. Le Goues, W. Visser, in:, Proceedings of the 26th ACM SIGSOFT International Symposium on Software Testing and Analysis, ACM, 2017, pp. 376–379.
2017 | Conference Paper | IST-REx-ID: 942
S3: Syntax- and semantic-guided repair synthesis via programming by examples
X. Le, D.H. Chu, D. Lo, C. Le Goues, W. Visser, in:, ACM, 2017, pp. 593–604.
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X. Le, D.H. Chu, D. Lo, C. Le Goues, W. Visser, in:, ACM, 2017, pp. 593–604.
2017 | Journal Article | IST-REx-ID: 943 |

Decoding of position in the developing neural tube from antiparallel morphogen gradients
M.P. Zagórski, Y. Tabata, N. Brandenberg, M. Lutolf, G. Tkačik, T. Bollenbach, J. Briscoe, A. Kicheva, Science 356 (2017) 1379–1383.
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M.P. Zagórski, Y. Tabata, N. Brandenberg, M. Lutolf, G. Tkačik, T. Bollenbach, J. Briscoe, A. Kicheva, Science 356 (2017) 1379–1383.
2017 | Journal Article | IST-REx-ID: 944
Mosaic analysis with double markers reveals distinct sequential functions of Lgl1 in neural stem cells
R.J. Beattie, M.P. Postiglione, L. Burnett, S. Laukoter, C. Streicher, F. Pauler, G. Xiao, O. Klezovitch, V. Vasioukhin, T. Ghashghaei, S. Hippenmeyer, Neuron 94 (2017) 517–533.e3.
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| DOI
R.J. Beattie, M.P. Postiglione, L. Burnett, S. Laukoter, C. Streicher, F. Pauler, G. Xiao, O. Klezovitch, V. Vasioukhin, T. Ghashghaei, S. Hippenmeyer, Neuron 94 (2017) 517–533.e3.
2017 | Journal Article | IST-REx-ID: 9445 |

DDM1 and Lsh remodelers allow methylation of DNA wrapped in nucleosomes
D.B. Lyons, D. Zilberman, ELife 6 (2017).
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D.B. Lyons, D. Zilberman, ELife 6 (2017).
2017 | Journal Article | IST-REx-ID: 945 |

Global dosage compensation is ubiquitous in Lepidoptera, but counteracted by the masculinization of the Z chromosome
A.K. Huylmans, A. Macon, B. Vicoso, Molecular Biology and Evolution 34 (2017) 2637–2649.
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A.K. Huylmans, A. Macon, B. Vicoso, Molecular Biology and Evolution 34 (2017) 2637–2649.
2017 | Journal Article | IST-REx-ID: 946 |

Live tracking of moving samples in confocal microscopy for vertically grown roots
D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, J. Friml, ELife 6 (2017).
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D. von Wangenheim, R. Hauschild, M. Fendrych, V. Barone, E. Benková, J. Friml, ELife 6 (2017).
2017 | Journal Article | IST-REx-ID: 947 |

Quantifying the entropic cost of cellular growth control
D. De Martino, F. Capuani, A. De Martino, Physical Review E Statistical Nonlinear and Soft Matter Physics 96 (2017).
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D. De Martino, F. Capuani, A. De Martino, Physical Review E Statistical Nonlinear and Soft Matter Physics 96 (2017).
2017 | Conference Paper | IST-REx-ID: 950 |

Infinite-duration bidding games
G. Avni, T.A. Henzinger, V.K. Chonev, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
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| arXiv
G. Avni, T.A. Henzinger, V.K. Chonev, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
2017 | Journal Article | IST-REx-ID: 9506 |

An evolutionary case for functional gene body methylation in plants and animals
D. Zilberman, Genome Biology 18 (2017).
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| PubMed | Europe PMC
D. Zilberman, Genome Biology 18 (2017).
2017 | Journal Article | IST-REx-ID: 951 |

Local introduction and heterogeneous spatial spread of dengue-suppressing Wolbachia through an urban population of Aedes Aegypti
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, PLoS Biology 15 (2017).
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T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, PLoS Biology 15 (2017).
2017 | Journal Article | IST-REx-ID: 952 |

Deploying dengue-suppressing Wolbachia: Robust models predict slow but effective spatial spread in Aedes aegypti
M. Turelli, N.H. Barton, Theoretical Population Biology 115 (2017) 45–60.
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M. Turelli, N.H. Barton, Theoretical Population Biology 115 (2017) 45–60.
2017 | Journal Article | IST-REx-ID: 953 |

The sources of adaptive evolution
D. Charlesworth, N.H. Barton, B. Charlesworth, Proceedings of the Royal Society of London Series B Biological Sciences 284 (2017).
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D. Charlesworth, N.H. Barton, B. Charlesworth, Proceedings of the Royal Society of London Series B Biological Sciences 284 (2017).
2017 | Journal Article | IST-REx-ID: 954 |

On the mechanistic nature of epistasis in a canonical cis-regulatory element
M. Lagator, T. Paixao, N.H. Barton, J.P. Bollback, C.C. Guet, ELife 6 (2017).
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M. Lagator, T. Paixao, N.H. Barton, J.P. Bollback, C.C. Guet, ELife 6 (2017).
2017 | Journal Article | IST-REx-ID: 955 |

Evolution of new regulatory functions on biophysically realistic fitness landscapes
T. Friedlander, R. Prizak, N.H. Barton, G. Tkačik, Nature Communications 8 (2017).
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T. Friedlander, R. Prizak, N.H. Barton, G. Tkačik, Nature Communications 8 (2017).
2017 | Journal Article | IST-REx-ID: 956 |

Gradient flow and entropy inequalities for quantum Markov semigroups with detailed balance
E. Carlen, J. Maas, Journal of Functional Analysis 273 (2017) 1810–1869.
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E. Carlen, J. Maas, Journal of Functional Analysis 273 (2017) 1810–1869.
2017 | Book Chapter | IST-REx-ID: 957
Ancestral protein reconstruction and circular permutation for improving the stability and dynamic range of FRET sensors
B. Clifton, J. Whitfield, I. Sanchez-Romero, M. Herde, C. Henneberger, H.L. Janovjak, C. Jackson, in:, V. Stein (Ed.), Synthetic Protein Switches, Springer, 2017, pp. 71–87.
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B. Clifton, J. Whitfield, I. Sanchez-Romero, M. Herde, C. Henneberger, H.L. Janovjak, C. Jackson, in:, V. Stein (Ed.), Synthetic Protein Switches, Springer, 2017, pp. 71–87.
2017 | Journal Article | IST-REx-ID: 9574 |

Resilience for the Littlewood-Offord problem
A.S. Bandeira, A. Ferber, M.A. Kwan, Electronic Notes in Discrete Mathematics 61 (2017) 93–99.
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A.S. Bandeira, A. Ferber, M.A. Kwan, Electronic Notes in Discrete Mathematics 61 (2017) 93–99.
2017 | Book Chapter | IST-REx-ID: 958
Method for developing optical sensors using a synthetic dye fluorescent protein FRET pair and computational modeling and assessment
J. Mitchell, W. Zhang, M. Herde, C. Henneberger, H.L. Janovjak, M. O’Mara, C. Jackson, in:, V. Stein (Ed.), Synthetic Protein Switches, Springer, 2017, pp. 89–99.
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| DOI
J. Mitchell, W. Zhang, M. Herde, C. Henneberger, H.L. Janovjak, M. O’Mara, C. Jackson, in:, V. Stein (Ed.), Synthetic Protein Switches, Springer, 2017, pp. 89–99.
2017 | Journal Article | IST-REx-ID: 9588 |

Resilience for the Littlewood–Offord problem
A.S. Bandeira, A. Ferber, M.A. Kwan, Advances in Mathematics 319 (2017) 292–312.
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A.S. Bandeira, A. Ferber, M.A. Kwan, Advances in Mathematics 319 (2017) 292–312.
2017 | Journal Article | IST-REx-ID: 9589 |

The average number of spanning trees in sparse graphs with given degrees
C. Greenhill, M. Isaev, M.A. Kwan, B.D. McKay, European Journal of Combinatorics 63 (2017) 6–25.
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C. Greenhill, M. Isaev, M.A. Kwan, B.D. McKay, European Journal of Combinatorics 63 (2017) 6–25.
2017 | Journal Article | IST-REx-ID: 959 |

Scales and multimodal flux distributions in stationary metabolic network models via thermodynamics
D. De Martino, Physical Review E Statistical Nonlinear and Soft Matter Physics 95 (2017) 062419.
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D. De Martino, Physical Review E Statistical Nonlinear and Soft Matter Physics 95 (2017) 062419.
2017 | Journal Article | IST-REx-ID: 9590 |

Bounded-degree spanning trees in randomly perturbed graphs
M. Krivelevich, M.A. Kwan, B. Sudakov, SIAM Journal on Discrete Mathematics 31 (2017) 155–171.
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M. Krivelevich, M.A. Kwan, B. Sudakov, SIAM Journal on Discrete Mathematics 31 (2017) 155–171.
2017 | Conference Paper | IST-REx-ID: 962
Model counting for recursively-defined strings
M. Trinh, D.H. Chu, J. Jaffar, in:, R. Majumdar, V. Kunčak (Eds.), Springer, 2017, pp. 399–418.
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M. Trinh, D.H. Chu, J. Jaffar, in:, R. Majumdar, V. Kunčak (Eds.), Springer, 2017, pp. 399–418.
2017 | Conference Paper | IST-REx-ID: 963 |

Timed network games with clocks
G. Avni, S. Guha, O. Kupferman, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
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G. Avni, S. Guha, O. Kupferman, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2017.
2017 | Journal Article | IST-REx-ID: 9660 |

The Gibbs free energy of homogeneous nucleation: From atomistic nuclei to the planar limit
B. Cheng, G.A. Tribello, M. Ceriotti, The Journal of Chemical Physics 147 (2017).
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B. Cheng, G.A. Tribello, M. Ceriotti, The Journal of Chemical Physics 147 (2017).
2017 | Journal Article | IST-REx-ID: 9661 |

Bridging the gap between atomistic and macroscopic models of homogeneous nucleation
B. Cheng, M. Ceriotti, The Journal of Chemical Physics 146 (2017).
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B. Cheng, M. Ceriotti, The Journal of Chemical Physics 146 (2017).
2017 | Research Data Reference | IST-REx-ID: 9844
Source data for figures and tables
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
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N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
2017 | Research Data Reference | IST-REx-ID: 9845
Mathematical model
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
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N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
2017 | Research Data Reference | IST-REx-ID: 9846
Supplementary methods
N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
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N. Nikolic, F. Schreiber, A. Dal Co, D. Kiviet, T. Bergmiller, S. Littmann, M. Kuypers, M. Ackermann, (2017).
2017 | Research Data Reference | IST-REx-ID: 9849
Modelling and simulation details
M. Lukacisinova, S. Novak, T. Paixao, (2017).
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M. Lukacisinova, S. Novak, T. Paixao, (2017).
2017 | Research Data Reference | IST-REx-ID: 9850
Extensions of the model
M. Lukacisinova, S. Novak, T. Paixao, (2017).
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M. Lukacisinova, S. Novak, T. Paixao, (2017).
2017 | Research Data Reference | IST-REx-ID: 9851
Heuristic prediction for multiple stresses
M. Lukacisinova, S. Novak, T. Paixao, (2017).
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M. Lukacisinova, S. Novak, T. Paixao, (2017).
2017 | Research Data Reference | IST-REx-ID: 9852
Resistance frequencies for different combination strategies
M. Lukacisinova, S. Novak, T. Paixao, (2017).
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M. Lukacisinova, S. Novak, T. Paixao, (2017).
2017 | Research Data Reference | IST-REx-ID: 9855
Supplementary appendix
M.J. Chalk, P. Masset, B. Gutkin, S. Denève, (2017).
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M.J. Chalk, P. Masset, B. Gutkin, S. Denève, (2017).
2017 | Research Data Reference | IST-REx-ID: 9856
Supporting Information concerning additional likelihood analyses and results
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
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T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
2017 | Research Data Reference | IST-REx-ID: 9857
Supporting information concerning observed wMel frequencies and analyses of habitat variables
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
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T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
2017 | Research Data Reference | IST-REx-ID: 9858
Excel file with data on mosquito densities, Wolbachia infection status and housing characteristics
T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
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| Files available
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T. Schmidt, N.H. Barton, G. Rasic, A. Turley, B. Montgomery, I. Iturbe Ormaetxe, P. Cook, P. Ryan, S. Ritchie, A. Hoffmann, S. O’Neill, M. Turelli, (2017).
2017 | Journal Article | IST-REx-ID: 988 |

Current-phase relation of ballistic graphene Josephson junctions
G. Nanda, J.L. Aguilera Servin, P. Rakyta, A. Kormányos, R. Kleiner, D. Koelle, K. Watanabe, T. Taniguchi, L. Vandersypen, S. Goswami, Nano Letters 17 (2017) 3396–3401.
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G. Nanda, J.L. Aguilera Servin, P. Rakyta, A. Kormányos, R. Kleiner, D. Koelle, K. Watanabe, T. Taniguchi, L. Vandersypen, S. Goswami, Nano Letters 17 (2017) 3396–3401.
2017 | Conference Paper | IST-REx-ID: 989
Transport based image morphing with intensity modulation
J. Maas, M. Rumpf, S. Simon, in:, F. Lauze, Y. Dong, A. Bjorholm Dahl (Eds.), Springer, 2017, pp. 563–577.
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| DOI
J. Maas, M. Rumpf, S. Simon, in:, F. Lauze, Y. Dong, A. Bjorholm Dahl (Eds.), Springer, 2017, pp. 563–577.
2017 | Journal Article | IST-REx-ID: 990 |

Divergence and evolution of assortative mating in a polygenic trait model of speciation with gene flow
H. Sachdeva, N.H. Barton, Evolution; International Journal of Organic Evolution 71 (2017) 1478–1493.
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H. Sachdeva, N.H. Barton, Evolution; International Journal of Organic Evolution 71 (2017) 1478–1493.
2017 | Journal Article | IST-REx-ID: 991
Synaptotagmins: That’s why so many
C. Chen, P.M. Jonas, Neuron 94 (2017) 694–696.
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| DOI
C. Chen, P.M. Jonas, Neuron 94 (2017) 694–696.
2017 | Thesis | IST-REx-ID: 992 |

Complexity of constraint satisfaction
M. Rolinek, Complexity of Constraint Satisfaction, IST Austria, 2017.
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M. Rolinek, Complexity of Constraint Satisfaction, IST Austria, 2017.
2017 | Journal Article | IST-REx-ID: 993 |

Subsampling scaling
A. Levina (Martius), V. Priesemann, Nature Communications 8 (2017).
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A. Levina (Martius), V. Priesemann, Nature Communications 8 (2017).
2017 | Journal Article | IST-REx-ID: 994 |

Fingerprints of angulon instabilities in the spectra of matrix-isolated molecules
I. Cherepanov, M. Lemeshko, Physical Review Materials 1 (2017).
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I. Cherepanov, M. Lemeshko, Physical Review Materials 1 (2017).
2017 | Journal Article | IST-REx-ID: 995 |

Diagrammatic approach to orbital quantum impurities interacting with a many-particle environment
G. Bighin, M. Lemeshko, Physical Review B - Condensed Matter and Materials Physics 96 (2017).
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G. Bighin, M. Lemeshko, Physical Review B - Condensed Matter and Materials Physics 96 (2017).