Please note that ISTA Research Explorer no longer supports Internet Explorer versions 8 or 9 (or earlier).
We recommend upgrading to the latest Internet Explorer, Google Chrome, or Firefox.
7712 Publications
2012 | Journal Article | IST-REx-ID: 345
Bottom-up processing of thermoelectric nanocomposites from colloidal nanocrystal building blocks: The case of Ag2Te–PbTe
D. Cadavid, M. Ibáñez, S. Gorsse, A. López, A. Cirera, J. Morante, A. Cabot, Journal of Nanoparticle Research 14 (2012).
View
| DOI
D. Cadavid, M. Ibáñez, S. Gorsse, A. López, A. Cirera, J. Morante, A. Cabot, Journal of Nanoparticle Research 14 (2012).
2012 | Journal Article | IST-REx-ID: 346
Solution-growth and optoelectronic performance of ZnO : Cl/TiO2 and ZnO : Cl/ZnxTiOy/TiO2 core–shell nanowires with tunable shell thickness
J. Fan, R. Zamani, C. Fábrega, A. Shavel, C. Flox, M. Ibáñez, T. Andreu, A. López, J. Arbiol, J. Morante, A. Cabot, Journal of Physics D: Applied Physics 45 (2012).
View
| DOI
J. Fan, R. Zamani, C. Fábrega, A. Shavel, C. Flox, M. Ibáñez, T. Andreu, A. López, J. Arbiol, J. Morante, A. Cabot, Journal of Physics D: Applied Physics 45 (2012).
2012 | Journal Article | IST-REx-ID: 347 |

Cu 2ZnGeSe 4 nanocrystals: Synthesis and thermoelectric properties
M. Ibáñez, R. Zamani, A. Lalonde, D. Cadavid, W. Li, A. Shavel, J. Arbiol, J. Morante, S. Gorsse, G.J. Snyder, A. Cabot, Journal of the American Chemical Society 134 (2012) 4060–4063.
View
| DOI
| Download None (ext.)
M. Ibáñez, R. Zamani, A. Lalonde, D. Cadavid, W. Li, A. Shavel, J. Arbiol, J. Morante, S. Gorsse, G.J. Snyder, A. Cabot, Journal of the American Chemical Society 134 (2012) 4060–4063.
2012 | Journal Article | IST-REx-ID: 377
Crystallographic control at the nanoscale to enhance functionality: Polytypic Cu2GeSe3 nanoparticles as thermoelectric materials
M. Ibáñez, R. Zamani, W. Li, D. Cadavid, S. Gorse, N. Katchoi, A. Shavel, A. López, J. Morante, J. Arbiol, A. Cabot, Chemistry of Materials 24 (2012) 4615–4622.
View
| DOI
M. Ibáñez, R. Zamani, W. Li, D. Cadavid, S. Gorse, N. Katchoi, A. Shavel, A. López, J. Morante, J. Arbiol, A. Cabot, Chemistry of Materials 24 (2012) 4615–4622.
2012 | Journal Article | IST-REx-ID: 3836
Separate compilation of hierarchical real-time programs into linear-bounded embedded machine code
A. Ghosal, D. Iercan, C. Kirsch, T.A. Henzinger, A. Sangiovanni Vincentelli, Science of Computer Programming 77 (2012) 96–112.
View
| DOI
A. Ghosal, D. Iercan, C. Kirsch, T.A. Henzinger, A. Sangiovanni Vincentelli, Science of Computer Programming 77 (2012) 96–112.
2012 | Journal Article | IST-REx-ID: 387 |

STM imaging of impurity resonances on Bi 2Se 3
Z. Alpichshev, R. Biswas, A. Balatsky, J. Analytis, J. Chu, I. Fisher, A. Kapitulnik, Physical Review Letters 108 (2012).
View
| DOI
| Download None (ext.)
Z. Alpichshev, R. Biswas, A. Balatsky, J. Analytis, J. Chu, I. Fisher, A. Kapitulnik, Physical Review Letters 108 (2012).
2012 | Journal Article | IST-REx-ID: 3846 |

A survey of stochastic ω regular games
K. Chatterjee, T.A. Henzinger, Journal of Computer and System Sciences 78 (2012) 394–413.
View
| Files available
| DOI
| Download Submitted Version (ext.)
K. Chatterjee, T.A. Henzinger, Journal of Computer and System Sciences 78 (2012) 394–413.
2012 | Journal Article | IST-REx-ID: 3118 |

Tracking surfaces with evolving topology
M. Bojsen-Hansen, H. Li, C. Wojtan, ACM Transactions on Graphics 31 (2012).
View
| Files available
| DOI
M. Bojsen-Hansen, H. Li, C. Wojtan, ACM Transactions on Graphics 31 (2012).
2012 | Journal Article | IST-REx-ID: 3248 |

Real-time detection of colored objects in multiple camera streams with off-the-shelf hardware components
C. Lampert, J. Peters, Journal of Real-Time Image Processing 7 (2012) 31–41.
View
| Files available
| DOI
C. Lampert, J. Peters, Journal of Real-Time Image Processing 7 (2012) 31–41.
2012 | Conference Paper | IST-REx-ID: 3134
Add isotropic Gaussian kernels at own risk: More and more resilient modes in higher dimensions
H. Edelsbrunner, B. Fasy, G. Rote, in:, Proceedings of the Twenty-Eighth Annual Symposium on Computational Geometry , ACM, 2012, pp. 91–100.
View
| Files available
| DOI
H. Edelsbrunner, B. Fasy, G. Rote, in:, Proceedings of the Twenty-Eighth Annual Symposium on Computational Geometry , ACM, 2012, pp. 91–100.
2012 | Conference Paper | IST-REx-ID: 10906 |

HSF(C): A software verifier based on Horn clauses
S. Grebenshchikov, A. Gupta, N.P. Lopes, C. Popeea, A. Rybalchenko, in:, C. Flanagan, B. König (Eds.), Tools and Algorithms for the Construction and Analysis of Systems, Springer, Berlin, Heidelberg, 2012, pp. 549–551.
View
| DOI
| Download Published Version (ext.)
S. Grebenshchikov, A. Gupta, N.P. Lopes, C. Popeea, A. Rybalchenko, in:, C. Flanagan, B. König (Eds.), Tools and Algorithms for the Construction and Analysis of Systems, Springer, Berlin, Heidelberg, 2012, pp. 549–551.
2012 | Conference Paper | IST-REx-ID: 10903
Accurate invariant checking for programs manipulating lists and arrays with infinite data
A. Bouajjani, C. Dragoi, C. Enea, M. Sighireanu, in:, Automated Technology for Verification and Analysis, Springer, Berlin, Heidelberg, 2012, pp. 167–182.
View
| DOI
A. Bouajjani, C. Dragoi, C. Enea, M. Sighireanu, in:, Automated Technology for Verification and Analysis, Springer, Berlin, Heidelberg, 2012, pp. 167–182.
2012 | Book Chapter | IST-REx-ID: 10896
The double-edged sword: Gaining Adenosine at the expense of ATP. How to balance the books
S. zur Nedden, A.S. Doney, B.G. Frenguelli, in:, S. Masino, D. Boison (Eds.), Adenosine, 1st ed., Springer, New York, 2012, pp. 109–129.
View
| DOI
S. zur Nedden, A.S. Doney, B.G. Frenguelli, in:, S. Masino, D. Boison (Eds.), Adenosine, 1st ed., Springer, New York, 2012, pp. 109–129.
2012 | Journal Article | IST-REx-ID: 11089
Outfits for different occasions: tissue-specific roles of Nuclear Envelope proteins
J.S. Gomez-Cavazos, M. Hetzer, Current Opinion in Cell Biology 24 (2012) 775–783.
View
| DOI
| PubMed | Europe PMC
J.S. Gomez-Cavazos, M. Hetzer, Current Opinion in Cell Biology 24 (2012) 775–783.
2012 | Journal Article | IST-REx-ID: 11091
Transient nuclear envelope rupturing during interphase in human cancer cells
J.D. Vargas, E.M. Hatch, D.J. Anderson, M. Hetzer, Nucleus 3 (2012) 88–100.
View
| DOI
| PubMed | Europe PMC
J.D. Vargas, E.M. Hatch, D.J. Anderson, M. Hetzer, Nucleus 3 (2012) 88–100.
2012 | Journal Article | IST-REx-ID: 11093 |

A change in nuclear pore complex composition regulates cell differentiation
M.A. D’Angelo, J.S. Gomez-Cavazos, A. Mei, D.H. Lackner, M. Hetzer, Developmental Cell 22 (2012) 446–458.
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
M.A. D’Angelo, J.S. Gomez-Cavazos, A. Mei, D.H. Lackner, M. Hetzer, Developmental Cell 22 (2012) 446–458.
2012 | Journal Article | IST-REx-ID: 11092
Extremely long-lived nuclear pore proteins in the rat brain
J.N. Savas, B.H. Toyama, T. Xu, J.R. Yates, M. Hetzer, Science 335 (2012) 942–942.
View
| DOI
| PubMed | Europe PMC
J.N. Savas, B.H. Toyama, T. Xu, J.R. Yates, M. Hetzer, Science 335 (2012) 942–942.
2012 | Journal Article | IST-REx-ID: 11090 |

RNP export by nuclear envelope budding
E.M. Hatch, M. Hetzer, Cell 149 (2012) 733–735.
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
E.M. Hatch, M. Hetzer, Cell 149 (2012) 733–735.
2012 | Conference Paper | IST-REx-ID: 10905
Polynomial-time algorithms for energy games with special weight structures
K. Chatterjee, M.H. Henzinger, S. Krinninger, D. Nanongkai, in:, L. Epstein, P. Ferragina (Eds.), Algorithms – ESA 2012, Springer, Berlin, Heidelberg, 2012, pp. 301–312.
View
| Files available
| DOI
| arXiv
K. Chatterjee, M.H. Henzinger, S. Krinninger, D. Nanongkai, in:, L. Epstein, P. Ferragina (Eds.), Algorithms – ESA 2012, Springer, Berlin, Heidelberg, 2012, pp. 301–312.
2012 | Journal Article | IST-REx-ID: 11751
Thermoelectric properties of Ho-doped Bi0.88Sb0.12
K.C. Lukas, G. Joshi, K.A. Modic, Z.F. Ren, C.P. Opeil, Journal of Materials Science 47 (2012) 5729–5734.
View
| DOI
| arXiv
K.C. Lukas, G. Joshi, K.A. Modic, Z.F. Ren, C.P. Opeil, Journal of Materials Science 47 (2012) 5729–5734.
2012 | Conference Paper | IST-REx-ID: 3165
An O(n2) time algorithm for alternating Büchi games
K. Chatterjee, M.H. Henzinger, in:, Proceedings of the Annual ACM-SIAM Symposium on Discrete Algorithms, SIAM, 2012, pp. 1386–1399.
View
| Files available
| DOI
K. Chatterjee, M.H. Henzinger, in:, Proceedings of the Annual ACM-SIAM Symposium on Discrete Algorithms, SIAM, 2012, pp. 1386–1399.
2012 | Conference Paper | IST-REx-ID: 10904
Strategy synthesis for multi-dimensional quantitative objectives
K. Chatterjee, M. Randour, J.-F. Raskin, in:, M. Koutny, I. Ulidowski (Eds.), CONCUR 2012 - Concurrency Theory, Springer, Berlin, Heidelberg, 2012, pp. 115–131.
View
| Files available
| DOI
| arXiv
K. Chatterjee, M. Randour, J.-F. Raskin, in:, M. Koutny, I. Ulidowski (Eds.), CONCUR 2012 - Concurrency Theory, Springer, Berlin, Heidelberg, 2012, pp. 115–131.
2012 | Journal Article | IST-REx-ID: 3242 |

Social transfer of pathogenic fungus promotes active immunisation in ant colonies
M. Konrad, M. Vyleta, F. Theis, M. Stock, S. Tragust, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, PLoS Biology 10 (2012).
View
| Files available
| DOI
M. Konrad, M. Vyleta, F. Theis, M. Stock, S. Tragust, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, PLoS Biology 10 (2012).
2012 | Research Data Reference | IST-REx-ID: 9755 |

Data from: Social transfer of pathogenic fungus promotes active immunisation in ant colonies
M. Konrad, M. Vyleta, F. Theis, M. Stock, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, (2012).
View
| Files available
| DOI
| Download Published Version (ext.)
M. Konrad, M. Vyleta, F. Theis, M. Stock, M. Klatt, V. Drescher, C. Marr, L.V. Ugelvig, S. Cremer, (2012).
2012 | Research Data Reference | IST-REx-ID: 9757 |

Data from: Ants disinfect fungus-exposed brood by oral uptake and spread of their poison
S. Tragust, B. Mitteregger, V. Barone, M. Konrad, L.V. Ugelvig, S. Cremer, (2012).
View
| Files available
| DOI
| Download Published Version (ext.)
S. Tragust, B. Mitteregger, V. Barone, M. Konrad, L.V. Ugelvig, S. Cremer, (2012).
2012 | Research Data Reference | IST-REx-ID: 9758 |

Data from: Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates
S. Aeschbacher, A. Futschik, M. Beaumont, (2012).
View
| Files available
| DOI
| Download Published Version (ext.)
S. Aeschbacher, A. Futschik, M. Beaumont, (2012).
2012 | Journal Article | IST-REx-ID: 492 |

GiA Roots: Software for the high throughput analysis of plant root system architecture
T. Galkovskyi, Y. Mileyko, A. Bucksch, B. Moore, O. Symonova, C. Price, C. Topp, A. Iyer Pascuzzi, P. Zurek, S. Fang, J. Harer, P. Benfey, J. Weitz, BMC Plant Biology 12 (2012).
View
| Files available
| DOI
T. Galkovskyi, Y. Mileyko, A. Bucksch, B. Moore, O. Symonova, C. Price, C. Topp, A. Iyer Pascuzzi, P. Zurek, S. Fang, J. Harer, P. Benfey, J. Weitz, BMC Plant Biology 12 (2012).
2012 | Journal Article | IST-REx-ID: 11964
Direct arylation of benzene with aryl bromides using high‐temperature/high‐pressure process windows: Expanding the scope of C-H activation chemistry
B. Pieber, D. Cantillo, C.O. Kappe, Chemistry – A European Journal 18 (2012) 5047–5055.
View
| DOI
| PubMed | Europe PMC
B. Pieber, D. Cantillo, C.O. Kappe, Chemistry – A European Journal 18 (2012) 5047–5055.
2012 | Journal Article | IST-REx-ID: 11963
Copper-catalyzed formation of C-O bonds by direct α-C-H bond activation of ethers using stoichiometric amounts of peroxide in batch and continuous-flow formats
G.S. Kumar, B. Pieber, K.R. Reddy, C.O. Kappe, Chemistry - A European Journal 18 (2012) 6124–6128.
View
| DOI
| PubMed | Europe PMC
G.S. Kumar, B. Pieber, K.R. Reddy, C.O. Kappe, Chemistry - A European Journal 18 (2012) 6124–6128.
2011 | Journal Article | IST-REx-ID: 2799
The onset of turbulence in pipe flow
K. Avila, D. Moxey, A. De Lózar, M. Avila, D. Barkley, B. Hof, Science 333 (2011) 192–196.
View
| DOI
K. Avila, D. Moxey, A. De Lózar, M. Avila, D. Barkley, B. Hof, Science 333 (2011) 192–196.
2011 | Journal Article | IST-REx-ID: 2800
Experimental investigation of laminar turbulent intermittency in pipe flow
D. Samanta, A. De Lózar, B. Hof, Journal of Fluid Mechanics 681 (2011) 193–204.
View
| DOI
D. Samanta, A. De Lózar, B. Hof, Journal of Fluid Mechanics 681 (2011) 193–204.
2011 | Conference Paper | IST-REx-ID: 2801
A Lagrangian approach to the interface velocity of turbulent puffs in pipe flow
M. Holzner, M. Avila, A. De Lózar, B. Hof, in:, IOP Publishing Ltd., 2011.
View
| DOI
M. Holzner, M. Avila, A. De Lózar, B. Hof, in:, IOP Publishing Ltd., 2011.
2011 | Journal Article | IST-REx-ID: 2871
Sending mixed messages: Auxin-cytokinin crosstalk in roots
A. Bishopp, E. Benková, Y. Helariutta, Current Opinion in Plant Biology 14 (2011) 10–16.
View
| DOI
A. Bishopp, E. Benková, Y. Helariutta, Current Opinion in Plant Biology 14 (2011) 10–16.
2011 | Journal Article | IST-REx-ID: 2874
Hierarchy of hormone action controlling apical hook development in Arabidopsis
J. Gallego Bartolomé, M. Arana, F. Vandenbussche, P. Žádníková, E. Minguet, V. Guardiola, D. Van Der Straeten, E. Benková, D. Alabadí, M. Blázquez, Plant Journal 67 (2011) 622–634.
View
| DOI
J. Gallego Bartolomé, M. Arana, F. Vandenbussche, P. Žádníková, E. Minguet, V. Guardiola, D. Van Der Straeten, E. Benková, D. Alabadí, M. Blázquez, Plant Journal 67 (2011) 622–634.
2011 | Journal Article | IST-REx-ID: 2897
Redundancy and the Evolution of Cis Regulatory Element Multiplicity
T. Paixao, R. Azevedo, PLoS Computational Biology 6 (2011).
View
| DOI
T. Paixao, R. Azevedo, PLoS Computational Biology 6 (2011).
2011 | Journal Article | IST-REx-ID: 2898
Sex ratio evolution under probabilistic sex determination
T. Paixao, S. Phadke, R. Azevedo, R. Zufall, Evolution; International Journal of Organic Evolution 65 (2011) 2050–2060.
View
| DOI
T. Paixao, S. Phadke, R. Azevedo, R. Zufall, Evolution; International Journal of Organic Evolution 65 (2011) 2050–2060.
2011 | Book Chapter | IST-REx-ID: 2922
Graph-cut Based Image Segmentation with Connectivity Priors
S. Vicente, V. Kolmogorov, C. Rother, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
View
S. Vicente, V. Kolmogorov, C. Rother, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
2011 | Book Chapter | IST-REx-ID: 2923
Analyzing Convex Relaxations for MAP Estimation
M.P. Kumar, V. Kolmogorov, P. Torr, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
View
M.P. Kumar, V. Kolmogorov, P. Torr, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
2011 | Book Chapter | IST-REx-ID: 2924
Bilayer Segmentation of Video
A. Criminisi, G. Cross, A. Blake, V. Kolmogorov, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
View
A. Criminisi, G. Cross, A. Blake, V. Kolmogorov, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
2011 | Book Chapter | IST-REx-ID: 2925
Interactive Foreground Extraction using graph cut
C. Rother, V. Kolmogorov, Y. Boykov, A. Blake, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
View
C. Rother, V. Kolmogorov, Y. Boykov, A. Blake, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011.
2011 | Book Chapter | IST-REx-ID: 2935
Basic graph cut algorithms
Y. Boykov, V. Kolmogorov, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011, pp. 31–50.
View
Y. Boykov, V. Kolmogorov, in:, A. Blake, P. Kohli, C. Rother (Eds.), Markov Random Fields for Vision and Image Processing, Massachusetts Institute of Technology Press, 2011, pp. 31–50.
2011 | Conference Paper | IST-REx-ID: 2960
Privacy Preserving GWAS Data Sharing
S. Fienberg, A. Slavkovic, C. Uhler, in:, IEEE, 2011.
View
| DOI
S. Fienberg, A. Slavkovic, C. Uhler, in:, IEEE, 2011.
2011 | Journal Article | IST-REx-ID: 2961 |

Detecting epistasis via Markov bases
A. Malaspinas, C. Uhler, Journal of Algebraic Statistics 2 (2011) 36–53.
View
| DOI
| Download (ext.)
A. Malaspinas, C. Uhler, Journal of Algebraic Statistics 2 (2011) 36–53.
2011 | Conference Paper | IST-REx-ID: 2975
A Framework for Practical Universally Composable Zero-Knowledge Protocols
J. Camenisch, S. Krenn, V. Shoup, in:, D. Lee, X. Wang (Eds.), Springer, 2011, pp. 449–467.
View
| DOI
| Download (ext.)
J. Camenisch, S. Krenn, V. Shoup, in:, D. Lee, X. Wang (Eds.), Springer, 2011, pp. 449–467.
2011 | Conference Paper | IST-REx-ID: 2976
Cache Games - Bringing Access-Based Cache Attacks on AES to Practice
D. Gullasch, E. Bangerter, S. Krenn, in:, IEEE, 2011, pp. 490–505.
View
| DOI
| Download (ext.)
D. Gullasch, E. Bangerter, S. Krenn, in:, IEEE, 2011, pp. 490–505.
2011 | Conference Paper | IST-REx-ID: 2977
cPLC - A Cryptographic Programming Language and Compiler
E. Bangerter, S. Krenn, M. Seifriz, U. Ultes Nitsche, in:, H. Venter, M. Coetzee, M. Loock (Eds.), IEEE, 2011.
View
| DOI
E. Bangerter, S. Krenn, M. Seifriz, U. Ultes Nitsche, in:, H. Venter, M. Coetzee, M. Loock (Eds.), IEEE, 2011.
2011 | Journal Article | IST-REx-ID: 3082
Competitive canalization of PIN dependent auxin flow from axillary buds controls pea bud outgrowth
J. Balla, P. Kalousek, V. Reinöhl, J. Friml, S. Procházka, Plant Journal 65 (2011) 571–577.
View
| DOI
J. Balla, P. Kalousek, V. Reinöhl, J. Friml, S. Procházka, Plant Journal 65 (2011) 571–577.
2011 | Journal Article | IST-REx-ID: 3083
ARF1 localizes to the golgi and the trans Golgi network
D. Robinson, D. Scheuring, S. Naramoto, J. Friml, Plant Cell 23 (2011) 846–849.
View
| DOI
D. Robinson, D. Scheuring, S. Naramoto, J. Friml, Plant Cell 23 (2011) 846–849.
2011 | Journal Article | IST-REx-ID: 3084
PIN polarity maintenance by the cell wall in Arabidopsis
E. Feraru, M. Feraru, J. Kleine Vehn, A. Martinière, G. Mouille, S. Vanneste, S. Vernhettes, J. Runions, J. Friml, Current Biology 21 (2011) 338–343.
View
| DOI
E. Feraru, M. Feraru, J. Kleine Vehn, A. Martinière, G. Mouille, S. Vanneste, S. Vernhettes, J. Runions, J. Friml, Current Biology 21 (2011) 338–343.
2011 | Journal Article | IST-REx-ID: 3085
Light-mediated polarization of the PIN3 auxin transporter for the phototropic response in Arabidopsis
Z. Ding, C. Galván Ampudia, E. Demarsy, Ł. Łangowski, J. Kleine Vehn, Y. Fan, M. Morita, M. Tasaka, C. Fankhauser, R. Offringa, J. Friml, Nature Cell Biology 13 (2011) 447–453.
View
| DOI
Z. Ding, C. Galván Ampudia, E. Demarsy, Ł. Łangowski, J. Kleine Vehn, Y. Fan, M. Morita, M. Tasaka, C. Fankhauser, R. Offringa, J. Friml, Nature Cell Biology 13 (2011) 447–453.
2011 | Journal Article | IST-REx-ID: 3086
Polar localized NPH3-like proteins regulate polarity and endocytosis of PIN-FORMED auxin efflux carriers
M. Furutani, N. Sakamoto, S. Yoshida, T. Kajiwara, H. Robert, J. Friml, M. Tasaka, Development 138 (2011) 2069–2078.
View
| DOI
M. Furutani, N. Sakamoto, S. Yoshida, T. Kajiwara, H. Robert, J. Friml, M. Tasaka, Development 138 (2011) 2069–2078.
2011 | Journal Article | IST-REx-ID: 3087
Clathrin mediates endocytosis and polar distribution of PIN auxin transporters in Arabidopsis
S. Kitakura, S. Vanneste, S. Robert, C. Löfke, T. Teichmann, H. Tanaka, J. Friml, Plant Cell 23 (2011) 1920–1931.
View
| DOI
S. Kitakura, S. Vanneste, S. Robert, C. Löfke, T. Teichmann, H. Tanaka, J. Friml, Plant Cell 23 (2011) 1920–1931.
2011 | Journal Article | IST-REx-ID: 3088
A mutually inhibitory interaction between auxin and cytokinin specifies vascular pattern in roots
A. Bishopp, H. Help, S. El Showk, D. Weijers, B. Scheres, J. Friml, E. Benková, A. Mähönen, Y. Helariutta, Current Biology 21 (2011) 917–926.
View
| DOI
A. Bishopp, H. Help, S. El Showk, D. Weijers, B. Scheres, J. Friml, E. Benková, A. Mähönen, Y. Helariutta, Current Biology 21 (2011) 917–926.
2011 | Journal Article | IST-REx-ID: 3089
Inositol trisphosphate-induced ca^2+ signaling modulates auxin transport and pin polarity
J. Zhang, S. Vanneste, P. Brewer, M. Michniewicz, P. Grones, J. Kleine Vehn, C. Löfke, T. Teichmann, A. Bielach, B. Cannoot, K. Hoyerová, X. Chen, H. Xue, E. Benková, E. Zažímalová, J. Friml, Developmental Cell 20 (2011) 855–866.
View
| DOI
J. Zhang, S. Vanneste, P. Brewer, M. Michniewicz, P. Grones, J. Kleine Vehn, C. Löfke, T. Teichmann, A. Bielach, B. Cannoot, K. Hoyerová, X. Chen, H. Xue, E. Benková, E. Zažímalová, J. Friml, Developmental Cell 20 (2011) 855–866.
2011 | Journal Article | IST-REx-ID: 3090
Cell plate restricted association of DRP1A and PIN proteins is required for cell polarity establishment in arabidopsis
J. Mravec, J. Petrášek, N. Li, S. Boeren, R. Karlova, S. Kitakura, M. Pařezová, S. Naramoto, T. Nodzyński, P. Dhonukshe, S. Bednarek, E. Zažímalová, S. De Vries, J. Friml, Current Biology 21 (2011) 1055–1060.
View
| DOI
J. Mravec, J. Petrášek, N. Li, S. Boeren, R. Karlova, S. Kitakura, M. Pařezová, S. Naramoto, T. Nodzyński, P. Dhonukshe, S. Bednarek, E. Zažímalová, S. De Vries, J. Friml, Current Biology 21 (2011) 1055–1060.
2011 | Journal Article | IST-REx-ID: 3091 |

Fleeting hormone cues get stabilized for plant organogenesis
M. Sauer, J. Friml, Molecular Systems Biology 7 (2011).
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
M. Sauer, J. Friml, Molecular Systems Biology 7 (2011).
2011 | Journal Article | IST-REx-ID: 3092 |

Feedback models for polarized auxin transport: An emerging trend
K.T. Wabnik, W. Govaerts, J. Friml, J. Kleine Vehn, Molecular BioSystems 7 (2011) 2352–2359.
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
K.T. Wabnik, W. Govaerts, J. Friml, J. Kleine Vehn, Molecular BioSystems 7 (2011) 2352–2359.
2011 | Journal Article | IST-REx-ID: 3093
Monoubiquitin dependent endocytosis of the Iron Regulated Transporter 1 IRT1 transporter controls iron uptake in plants
M. Barberon, E. Zelazny, S. Robert, G. Conéjéro, C. Curie, J. Friml, G. Vert, PNAS 108 (2011) E450–E458.
View
| DOI
M. Barberon, E. Zelazny, S. Robert, G. Conéjéro, C. Curie, J. Friml, G. Vert, PNAS 108 (2011) E450–E458.
2011 | Journal Article | IST-REx-ID: 3094
Polarization of PIN3 dependent auxin transport for hypocotyl gravitropic response in Arabidopsis thaliana
H. Rakusová, J. Gallego Bartolomé, M. Vanstraelen, H. Robert, D. Alabadí, M. Blázquez, E. Benková, J. Friml, Plant Journal 67 (2011) 817–826.
View
| DOI
H. Rakusová, J. Gallego Bartolomé, M. Vanstraelen, H. Robert, D. Alabadí, M. Blázquez, E. Benková, J. Friml, Plant Journal 67 (2011) 817–826.
2011 | Journal Article | IST-REx-ID: 3095
Auxin minimum defines a developmental window for lateral root initiation
J. Dubrovsky, S. Napsucialy Mendivil, J. Duclercq, Y. Cheng, S. Shishkova, M. Ivanchenko, J. Friml, A. Murphy, E. Benková, New Phytologist 191 (2011) 970–983.
View
| DOI
J. Dubrovsky, S. Napsucialy Mendivil, J. Duclercq, Y. Cheng, S. Shishkova, M. Ivanchenko, J. Friml, A. Murphy, E. Benková, New Phytologist 191 (2011) 970–983.
2011 | Journal Article | IST-REx-ID: 3096
Prototype cell-to-cell auxin transport mechanism by intracellular auxin compartmentalization
K.T. Wabnik, J. Kleine Vehn, W. Govaerts, J. Friml, Trends in Plant Science 16 (2011) 468–475.
View
| DOI
K.T. Wabnik, J. Kleine Vehn, W. Govaerts, J. Friml, Trends in Plant Science 16 (2011) 468–475.
2011 | Journal Article | IST-REx-ID: 3097
Cytokinin modulates endocytic trafficking of PIN1 auxin efflux carrier to control plant organogenesis
P. Marhavý, A. Bielach, L. Abas, A. Abuzeineh, J. Duclercq, H. Tanaka, M. Pařezová, J. Petrášek, J. Friml, J. Kleine Vehn, E. Benková, Developmental Cell 21 (2011) 796–804.
View
| DOI
P. Marhavý, A. Bielach, L. Abas, A. Abuzeineh, J. Duclercq, H. Tanaka, M. Pařezová, J. Petrášek, J. Friml, J. Kleine Vehn, E. Benková, Developmental Cell 21 (2011) 796–804.
2011 | Journal Article | IST-REx-ID: 3098
Recycling, clustering and endocytosis jointly maintain PIN auxin carrier polarity at the plasma membrane
J. Kleine Vehn, K.T. Wabnik, A. Martinière, Ł. Łangowski, K. Willig, S. Naramoto, J. Leitner, H. Tanaka, S. Jakobs, S. Robert, C. Luschnig, W. Govaerts, S. Hell, J. Runions, J. Friml, Molecular Systems Biology 7 (2011).
View
| DOI
J. Kleine Vehn, K.T. Wabnik, A. Martinière, Ł. Łangowski, K. Willig, S. Naramoto, J. Leitner, H. Tanaka, S. Jakobs, S. Robert, C. Luschnig, W. Govaerts, S. Hell, J. Runions, J. Friml, Molecular Systems Biology 7 (2011).
2011 | Journal Article | IST-REx-ID: 3099
Clusters of bioactive compounds target dynamic endomembrane networks in vivo
G. Drakakaki, S. Robert, A. Szatmári, M. Brown, S. Nagawa, D. Van Damme, M. Leonard, Z. Yang, T. Girke, S. Schmid, E. Russinova, J. Friml, N. Raikhel, G. Hicks, PNAS 108 (2011) 17850–17855.
View
| DOI
G. Drakakaki, S. Robert, A. Szatmári, M. Brown, S. Nagawa, D. Van Damme, M. Leonard, Z. Yang, T. Girke, S. Schmid, E. Russinova, J. Friml, N. Raikhel, G. Hicks, PNAS 108 (2011) 17850–17855.
2011 | Journal Article | IST-REx-ID: 3100 |

Developmental regulation of CYCA2s contributes to tissue-specific proliferation in Arabidopsis
S. Vanneste, F. Coppens, E. Lee, T. Donner, Z. Xie, G. Van Isterdael, S. Dhondt, F. De Winter, B. De Rybel, M. Vuylsteke, L. De Veylder, J. Friml, D. Inzé, E. Grotewold, E. Scarpella, F. Sack, G. Beemster, T. Beeckman, EMBO Journal 30 (2011) 3430–3441.
View
| DOI
| Download (ext.)
S. Vanneste, F. Coppens, E. Lee, T. Donner, Z. Xie, G. Van Isterdael, S. Dhondt, F. De Winter, B. De Rybel, M. Vuylsteke, L. De Veylder, J. Friml, D. Inzé, E. Grotewold, E. Scarpella, F. Sack, G. Beemster, T. Beeckman, EMBO Journal 30 (2011) 3430–3441.
2011 | Journal Article | IST-REx-ID: 3101 |

The AP 3 adaptor complex is required for vacuolar function in Arabidopsis
M. Zwiewka, E. Feraru, B. Möller, I. Hwang, M. Feraru, J. Kleine Vehn, D. Weijers, J. Friml, Cell Research 21 (2011) 1711–1722.
View
| DOI
| Download (ext.)
M. Zwiewka, E. Feraru, B. Möller, I. Hwang, M. Feraru, J. Kleine Vehn, D. Weijers, J. Friml, Cell Research 21 (2011) 1711–1722.
2011 | Journal Article | IST-REx-ID: 3102
Auxin Dependent cell cycle reactivation through transcriptional regulation of arabidopsis E2Fa by lateral organ boundary proteins
B. Berckmans, V. Vassileva, S. Schmid, S. Maes, B. Parizot, S. Naramoto, Z. Magyar, C. Lessa Alvim Kamei, C. Koncz, L. Bögre, G. Persiau, G. De Jaeger, J. Friml, R. Simon, T. Beeckman, L. De Veyldera, Plant Cell 23 (2011) 3671–3683.
View
| DOI
B. Berckmans, V. Vassileva, S. Schmid, S. Maes, B. Parizot, S. Naramoto, Z. Magyar, C. Lessa Alvim Kamei, C. Koncz, L. Bögre, G. Persiau, G. De Jaeger, J. Friml, R. Simon, T. Beeckman, L. De Veyldera, Plant Cell 23 (2011) 3671–3683.
2011 | Journal Article | IST-REx-ID: 3103
Clathrin-mediated endocytosis: The gateway into plant cells
X. Chen, N. Irani, J. Friml, Current Opinion in Plant Biology 14 (2011) 674–682.
View
| DOI
X. Chen, N. Irani, J. Friml, Current Opinion in Plant Biology 14 (2011) 674–682.
2011 | Journal Article | IST-REx-ID: 3138
Relationships between hippocampal sharp waves ripples and fast gamma oscillation Influence of dentate and entorhinal cortical activity
D. Sullivan, J.L. Csicsvari, K. Mizuseki, S. Montgomery, K. Diba, G. Buzsáki, Journal of Neuroscience 31 (2011) 8605–8616.
View
| DOI
D. Sullivan, J.L. Csicsvari, K. Mizuseki, S. Montgomery, K. Diba, G. Buzsáki, Journal of Neuroscience 31 (2011) 8605–8616.
2011 | Journal Article | IST-REx-ID: 3145
Site specific integrase mediated transgenesis in mice via pronuclear injection
B. Tasic, S. Hippenmeyer, C. Wang, M. Gamboa, H. Zong, Y. Chen Tsai, L. Luo, PNAS 108 (2011) 7902–7907.
View
| DOI
B. Tasic, S. Hippenmeyer, C. Wang, M. Gamboa, H. Zong, Y. Chen Tsai, L. Luo, PNAS 108 (2011) 7902–7907.
2011 | Journal Article | IST-REx-ID: 3147
Mosaic analysis with double markers reveals tumor cell of origin in glioma
C. Liu, J. Sage, M. Miller, R. Verhaak, S. Hippenmeyer, H. Vogel, O. Foreman, R. Bronson, A. Nishiyama, L. Luo, H. Zong, Cell 146 (2011) 209–221.
View
| DOI
C. Liu, J. Sage, M. Miller, R. Verhaak, S. Hippenmeyer, H. Vogel, O. Foreman, R. Bronson, A. Nishiyama, L. Luo, H. Zong, Cell 146 (2011) 209–221.
2011 | Journal Article | IST-REx-ID: 3154
Peroxiredoxin stabilization of DE-cadherin promotes primordial germ cell adhesion
M. Degennaro, T. Hurd, D.E. Siekhaus, B. Biteau, H. Jasper, R. Lehmann, Developmental Cell 20 (2011) 233–243.
View
| DOI
M. Degennaro, T. Hurd, D.E. Siekhaus, B. Biteau, H. Jasper, R. Lehmann, Developmental Cell 20 (2011) 233–243.
2011 | Conference Paper | IST-REx-ID: 3163
Maximum margin multi-label structured prediction
C. Lampert, in:, Neural Information Processing Systems, 2011.
View
| Files available
C. Lampert, in:, Neural Information Processing Systems, 2011.
2011 | Conference Paper | IST-REx-ID: 3204
Submodularity on a tree: Unifying Submodularity on a tree: Unifying L-convex and bisubmodular functions convex and bisubmodular functions
V. Kolmogorov, in:, Springer, 2011, pp. 400–411.
View
| DOI
| Download (ext.)
V. Kolmogorov, in:, Springer, 2011, pp. 400–411.
2011 | Conference Paper | IST-REx-ID: 3205
Dynamic tree block coordinate ascent
D. Tarlow, D. Batra, P. Kohli, V. Kolmogorov, in:, Omnipress, 2011, pp. 113–120.
View
| Download (ext.)
D. Tarlow, D. Batra, P. Kohli, V. Kolmogorov, in:, Omnipress, 2011, pp. 113–120.
2011 | Conference Paper | IST-REx-ID: 3206
Submodular decomposition framework for inference in associative Markov networks with global constraints
A. Osokin, D. Vetrov, V. Kolmogorov, in:, IEEE, 2011, pp. 1889–1896.
View
| DOI
| Download (ext.)
A. Osokin, D. Vetrov, V. Kolmogorov, in:, IEEE, 2011, pp. 1889–1896.
2011 | Conference Paper | IST-REx-ID: 3207
Object cosegmentation
S. Vicente, C. Rother, V. Kolmogorov, in:, IEEE, 2011, pp. 2217–2224.
View
| DOI
S. Vicente, C. Rother, V. Kolmogorov, in:, IEEE, 2011, pp. 2217–2224.
2011 | Conference Paper | IST-REx-ID: 3236
Parallel repetition for leakage resilience amplification revisited
A. Jain, K.Z. Pietrzak, in:, Springer, 2011, pp. 58–69.
View
| DOI
A. Jain, K.Z. Pietrzak, in:, Springer, 2011, pp. 58–69.
2011 | Conference Paper | IST-REx-ID: 3238
Efficient authentication from hard learning problems
E. Kiltz, K.Z. Pietrzak, D. Cash, A. Jain, D. Venturi, in:, Springer, 2011, pp. 7–26.
View
| Files available
| DOI
E. Kiltz, K.Z. Pietrzak, D. Cash, A. Jain, D. Venturi, in:, Springer, 2011, pp. 7–26.
2011 | Conference Paper | IST-REx-ID: 3239
Tamper proof circuits How to trade leakage for tamper resilience
S. Faust, K.Z. Pietrzak, D. Venturi, in:, Springer, 2011, pp. 391–402.
View
| DOI
S. Faust, K.Z. Pietrzak, D. Venturi, in:, Springer, 2011, pp. 391–402.
2011 | Conference Paper | IST-REx-ID: 3240
Leftover hash lemma revisited
B. Barak, Y. Dodis, H. Krawczyk, O. Pereira, K.Z. Pietrzak, F. Standaert, Y. Yu, in:, Springer, 2011, pp. 1–20.
View
| DOI
B. Barak, Y. Dodis, H. Krawczyk, O. Pereira, K.Z. Pietrzak, F. Standaert, Y. Yu, in:, Springer, 2011, pp. 1–20.
2011 | Conference Paper | IST-REx-ID: 3264
Solving recursion-free Horn clauses over LI+UIF
A. Gupta, C. Popeea, A. Rybalchenko, in:, H. Yang (Ed.), Springer, 2011, pp. 188–203.
View
| DOI
A. Gupta, C. Popeea, A. Rybalchenko, in:, H. Yang (Ed.), Springer, 2011, pp. 188–203.
2011 | Conference Paper | IST-REx-ID: 3266
Probabilistic joint image segmentation and labeling
A. Ion, J. Carreira, C. Sminchisescu, in:, NIPS Proceedings, Neural Information Processing Systems Foundation, 2011, pp. 1827–1835.
View
A. Ion, J. Carreira, C. Sminchisescu, in:, NIPS Proceedings, Neural Information Processing Systems Foundation, 2011, pp. 1827–1835.
2011 | Book Chapter | IST-REx-ID: 3268
Algebraic topology for computer vision
D. Freedman, C. Chen, in:, Computer Vision, Nova Science Publishers, 2011, pp. 239–268.
View
| Download None (ext.)
D. Freedman, C. Chen, in:, Computer Vision, Nova Science Publishers, 2011, pp. 239–268.
2011 | Journal Article | IST-REx-ID: 3269 |

Perceptual global illumination cancellation in complex projection environments
Y. Sheng, B. Cutler, C. Chen, J. Nasman, Computer Graphics Forum 30 (2011) 1261–1268.
View
| DOI
| Download Published Version (ext.)
Y. Sheng, B. Cutler, C. Chen, J. Nasman, Computer Graphics Forum 30 (2011) 1261–1268.
2011 | Conference Paper | IST-REx-ID: 3270
Persistent homology computation with a twist
C. Chen, M. Kerber, in:, TU Dortmund, 2011, pp. 197–200.
View
C. Chen, M. Kerber, in:, TU Dortmund, 2011, pp. 197–200.
2011 | Book Chapter | IST-REx-ID: 3271
Efficient computation of persistent homology for cubical data
H. Wagner, C. Chen, E. Vuçini, in:, R. Peikert, H. Hauser, H. Carr, R. Fuchs (Eds.), Topological Methods in Data Analysis and Visualization II, Springer, 2011, pp. 91–106.
View
| DOI
H. Wagner, C. Chen, E. Vuçini, in:, R. Peikert, H. Hauser, H. Carr, R. Fuchs (Eds.), Topological Methods in Data Analysis and Visualization II, Springer, 2011, pp. 91–106.
2011 | Thesis | IST-REx-ID: 3273
Mechanics of adhesion and de‐adhesion in zebrafish germ layer progenitors
J.-L. Maître, Mechanics of Adhesion and De‐adhesion in Zebrafish Germ Layer Progenitors, IST Austria, 2011.
View
J.-L. Maître, Mechanics of Adhesion and De‐adhesion in Zebrafish Germ Layer Progenitors, IST Austria, 2011.
2011 | Thesis | IST-REx-ID: 3275 |

The role of chemotactic gradients in dendritic cell migration
K. Schumann, The Role of Chemotactic Gradients in Dendritic Cell Migration, IST Austria, 2011.
View
| Files available
K. Schumann, The Role of Chemotactic Gradients in Dendritic Cell Migration, IST Austria, 2011.
2011 | Journal Article | IST-REx-ID: 3276 |

Fast, scalable, Bayesian spike identification for multi-electrode arrays
J. Prentice, J. Homann, K. Simmons, G. Tkačik, V. Balasubramanian, P. Nelson, PLoS One 6 (2011).
View
| Files available
| DOI
J. Prentice, J. Homann, K. Simmons, G. Tkačik, V. Balasubramanian, P. Nelson, PLoS One 6 (2011).
2011 | Journal Article | IST-REx-ID: 3278
A phylogenetic revision of the Glaucopsyche section (Lepidoptera: Lycaenidae), with special focus on the Phengaris-Maculinea clade
R. Vila, N. Pierce, D. Nash, L.V. Ugelvig, Molecular Phylogenetics and Evolution 61 (2011) 237–243.
View
| DOI
R. Vila, N. Pierce, D. Nash, L.V. Ugelvig, Molecular Phylogenetics and Evolution 61 (2011) 237–243.
2011 | Journal Article | IST-REx-ID: 3285
Spot variation fluorescence correlation spectroscopy allows for superresolution chronoscopy of confinement times in membranes
V. Ruprecht, S. Wieser, D. Marguet, G. Schuetz, Biophysical Journal 100 (2011) 2839–2845.
View
| DOI
V. Ruprecht, S. Wieser, D. Marguet, G. Schuetz, Biophysical Journal 100 (2011) 2839–2845.
2011 | Journal Article | IST-REx-ID: 3286
Cationic amphipathic peptides accumulate sialylated proteins and lipids in the plasma membrane of eukaryotic host cells
J. Weghuber, M. Aichinger, M. Brameshuber, S. Wieser, V. Ruprecht, B. Plochberger, J. Madl, A. Horner, S. Reipert, K. Lohner, T. Henics, G. Schuetz, Biochimica et Biophysica Acta (BBA) - Biomembranes 1808 (2011) 2581–2590.
View
| DOI
J. Weghuber, M. Aichinger, M. Brameshuber, S. Wieser, V. Ruprecht, B. Plochberger, J. Madl, A. Horner, S. Reipert, K. Lohner, T. Henics, G. Schuetz, Biochimica et Biophysica Acta (BBA) - Biomembranes 1808 (2011) 2581–2590.
2011 | Journal Article | IST-REx-ID: 3287
What can we learn from single molecule trajectories?
V. Ruprecht, M. Axmann, S. Wieser, G. Schuetz, Current Protein & Peptide Science 12 (2011) 714–724.
View
| DOI
V. Ruprecht, M. Axmann, S. Wieser, G. Schuetz, Current Protein & Peptide Science 12 (2011) 714–724.
2011 | Journal Article | IST-REx-ID: 3288 |

Multicomponent analysis of junctional movements regulated by Myosin II isoforms at the epithelial zonula adherens
M. Smutny, S. Wu, G. Gomez, S. Mangold, A. Yap, N. Hamilton, PLoS One 6 (2011).
View
| Files available
| DOI
M. Smutny, S. Wu, G. Gomez, S. Mangold, A. Yap, N. Hamilton, PLoS One 6 (2011).
2011 | Journal Article | IST-REx-ID: 3290 |

A general method for calculating likelihoods under the coalescent process
K. Lohse, R. Harrison, N.H. Barton, Genetics 189 (2011) 977–987.
View
| DOI
| Download Submitted Version (ext.)
K. Lohse, R. Harrison, N.H. Barton, Genetics 189 (2011) 977–987.
2011 | Conference Paper | IST-REx-ID: 3297 |

Liquid simulation with mesh-based surface tracking
C.J. Wojtan, M. Müller Fischer, T. Brochu, in:, ACM, 2011.
View
| Files available
| DOI
C.J. Wojtan, M. Müller Fischer, T. Brochu, in:, ACM, 2011.
2011 | Conference Paper | IST-REx-ID: 3298 |

Hybrid smoothed particle hydrodynamics
K. Raveendran, C.J. Wojtan, G. Turk, in:, S. Spencer (Ed.), ACM, 2011, pp. 33–42.
View
| Files available
| DOI
K. Raveendran, C.J. Wojtan, G. Turk, in:, S. Spencer (Ed.), ACM, 2011, pp. 33–42.
2011 | Conference Paper | IST-REx-ID: 3299 |

Propagation models for computing biochemical reaction networks
T.A. Henzinger, M. Mateescu, in:, Springer, 2011, pp. 1–3.
View
| Files available
| DOI
T.A. Henzinger, M. Mateescu, in:, Springer, 2011, pp. 1–3.
2011 | Conference Paper | IST-REx-ID: 3301 |

Tail approximation for the chemical master equation
T.A. Henzinger, M. Mateescu, in:, Tampere International Center for Signal Processing, 2011.
View
| Files available
T.A. Henzinger, M. Mateescu, in:, Tampere International Center for Signal Processing, 2011.