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8999 Publications


2013 | Conference Paper | IST-REx-ID: 590
Polarization dependent focusing
D. Schmid, T. Huang, R. Dirks, O. Hosten, P. Kwiat, in:, OSA, 2013.
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2013 | Journal Article | IST-REx-ID: 5920
Finiteness theorems and algorithms for permutation invariant chains of Laurent lattice ideals
C.J. Hillar, A. Martin del Campo Sanchez, Journal of Symbolic Computation 50 (2013) 314–334.
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2013 | Journal Article | IST-REx-ID: 591
Adjustable and robust methods for polarization-dependent focusing
D. Schmid, T. Huang, S. Hazrat, R. Dirks, O. Hosten, S. Quint, D. Thian, P. Kwiat, Optics Express 21 (2013) 15538–15552.
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2013 | Journal Article | IST-REx-ID: 595 | OA
Struggling to let go: A non-coding RNA directs its own extension and destruction
C. Bernecky, P. Cramer, EMBO Journal 32 (2013) 771–772.
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2013 | Journal Article | IST-REx-ID: 6128 | OA
Cross-modulation of homeostatic responses to temperature, oxygen and carbon dioxide in C. elegans
E. Kodama-Namba, L.A. Fenk, A.J. Bretscher, E. Gross, K.E. Busch, M. de Bono, PLoS Genetics 9 (2013).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 6130 | OA
Efficient genome editing in Caenorhabditis elegans by CRISPR-targeted homologous recombination
C. Chen, L.A. Fenk, M. de Bono, Nucleic Acids Research 41 (2013).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 6133 | OA
In vivo genetic dissection of O2-evoked cGMP dynamics in a Caenorhabditis elegans gas sensor
A. Couto, S. Oda, V.O. Nikolaev, Z. Soltesz, M. de Bono, Proceedings of the National Academy of Sciences 110 (2013) E3301–E3310.
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 6135
Worms under stress: C. elegans stress response and its relevance to complex human disease and aging
M. Rodriguez, L.B. Snoek, M. de Bono, J.E. Kammenga, Trends in Genetics 29 (2013) 367–374.
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2013 | Book Chapter | IST-REx-ID: 6132
Optogenetic actuation, inhibition, modulation and readout for neuronal networks generating behavior in the nematode Caenorhabditis elegans
M. de Bono, W.R. Schafer, A. Gottschalk, in:, P. Hegemann, S. Sigrist (Eds.), Optogenetics, Walter de Gruyter, 2013, pp. 61–78.
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2013 | Journal Article | IST-REx-ID: 6370
Molecular origins of the high-performance nonlinear optical susceptibility in a phenolic polyene chromophore: Electron density distributions, hydrogen bonding, and ab initio calculations
T.-C. Lin, J.M. Cole, A.P. Higginbotham, A.J. Edwards, R.O. Piltz, J. Pérez-Moreno, J.-Y. Seo, S.-C. Lee, K. Clays, O.-P. Kwon, The Journal of Physical Chemistry C 117 (2013) 9416–9430.
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2013 | Technical Report | IST-REx-ID: 6440 | OA
Replacing competition with cooperation to achieve scalable lock-free FIFO queues
T.A. Henzinger, H. Payer, A. Sezgin, Replacing Competition with Cooperation to Achieve Scalable Lock-Free FIFO Queues , IST Austria, 2013.
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 6768 | OA
A finite difference scheme for the stack filter simulating the MCM
M. Mondelli, Image Processing On Line 3 (2013) 68–111.
[Published Version] View | Files available | DOI
 

2013 | Conference Paper | IST-REx-ID: 2329 | OA
Hyperplane separation technique for multidimensional mean-payoff games
K. Chatterjee, Y. Velner, 8052 (2013) 500–515.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 7306
A stable cathode for the aprotic Li–O2 battery
M.M. Ottakam Thotiyl, S.A. Freunberger, Z. Peng, Y. Chen, Z. Liu, P.G. Bruce, Nature Materials 12 (2013) 1050–1056.
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2013 | Journal Article | IST-REx-ID: 7307
Charging a Li–O2 battery using a redox mediator
Y. Chen, S.A. Freunberger, Z. Peng, O. Fontaine, P.G. Bruce, Nature Chemistry 5 (2013) 489–494.
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2013 | Journal Article | IST-REx-ID: 7596
Arabidopsis casein kinase1 proteins CK1.3 and CK1.4 phosphorylate cryptochrome2 to regulate blue light signaling
S. Tan, C. Dai, H.-T. Liu, H.-W. Xue, The Plant Cell 25 (2013) 2618–2632.
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2013 | Journal Article | IST-REx-ID: 7595
Arabidopsis inositol 1,3,4-trisphosphate 5/6 kinase 2 is required for seed coat development
Y. Tang, S. Tan, H. Xue, Acta Biochimica et Biophysica Sinica 45 (2013) 549–560.
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2013 | Conference Paper | IST-REx-ID: 765
Randomized loose renaming in O(loglogn) time
D.-A. Alistarh, J. Aspnes, G. Giakkoupis, P. Woelfel, in:, ACM, 2013, pp. 200–209.
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2013 | Journal Article | IST-REx-ID: 7745
Partitioning of genetic variation across the genome using multimarker methods in a wild bird population
M.R. Robinson, A.W. Santure, I. DeCauwer, B.C. Sheldon, J. Slate, Molecular Ecology 22 (2013) 3963–3980.
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2013 | Journal Article | IST-REx-ID: 7746
Genomic dissection of variation in clutch size and egg mass in a wild great tit (Parus major) population
A.W. Santure, I. De Cauwer, M.R. Robinson, J. Poissant, B.C. Sheldon, J. Slate, Molecular Ecology 22 (2013) 3949–3962.
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2013 | Journal Article | IST-REx-ID: 7747 View | DOI
 

2013 | Journal Article | IST-REx-ID: 7775
Stability of jammed packings II: The transverse length scale
S.S. Schoenholz, C.P. Goodrich, O. Kogan, A.J. Liu, S.R. Nagel, Soft Matter 9 (2013).
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2013 | Journal Article | IST-REx-ID: 7774
Stability of jammed packings I: The rigidity length scale
C.P. Goodrich, W.G. Ellenbroek, A.J. Liu, Soft Matter 9 (2013).
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2013 | Journal Article | IST-REx-ID: 8030 | OA
Inhibitory synaptic plasticity: Spike timing-dependence and putative network function
T.P. Vogels, R.C. Froemke, N. Doyon, M. Gilson, J.S. Haas, R. Liu, A. Maffei, P. Miller, C.J. Wierenga, M.A. Woodin, F. Zenke, H. Sprekeler, Frontiers in Neural Circuits 7 (2013).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 811
Rac function is crucial for cell migration but is not required for spreading and focal adhesion formation
A. Steffen, M. Ladwein, G.A. Dimchev, A. Hein, L. Schwenkmezger, S. Arens, K. Ladwein, J. Holleboom, F.K. Schur, J. Small, J. Schwarz, R. Gerhard, J. Faix, T. Stradal, C. Brakebusch, K. Rottner, Journal of Cell Science 126 (2013) 4572–4588.
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2013 | Journal Article | IST-REx-ID: 812
Arp2/3 complex is essential for actin network treadmilling as well as for targeting of capping protein and cofilin
S. Koestler, A. Steffen, M. Nemethova, M. Winterhoff, N. Luo, J. Holleboom, J. Krupp, S. Jacob, M. Vinzenz, F.K. Schur, K. Schlüter, P. Gunning, C. Winkler, C. Schmeiser, J. Faix, T. Stradal, J. Small, K. Rottner, Molecular Biology of the Cell 24 (2013) 2861–2875.
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2013 | Journal Article | IST-REx-ID: 810
Determination of protein structure at 8.5Å resolution using cryo-electron tomography and sub-tomogram averaging
F.K. Schur, W. Hagen, A. De Marco, J. Briggs, Journal of Structural Biology 184 (2013) 394–400.
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2013 | Journal Article | IST-REx-ID: 8245 | OA
Trastuzumab mediates antibody-dependent cell-mediated cytotoxicity and phagocytosis to the same extent in both adjuvant and metastatic HER2/neu breast cancer patients
B. Petricevic, J. Laengle, J. Singer, M. Sachet, J. Singer, G. Steger, R. Bartsch, E. Jensen-Jarolim, M. Bergmann, Journal of Translational Medicine 11 (2013).
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2013 | Journal Article | IST-REx-ID: 827 | OA
Cytokinin cross talking during biotic and abiotic stress responses
J. O’Brien, E. Benková, Frontiers in Plant Science 4 (2013).
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 828 | OA
Systems approaches to study root architecture dynamics
C. Cuesta, K.T. Wabnik, E. Benková, Frontiers in Plant Science 4 (2013).
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 830
An integrative model of the control of ovule primordia formation
F. Galbiati, D. Sinha Roy, S. Simonini, M. Cucinotta, L. Ceccato, C. Cuesta, M. Šimášková, E. Benková, Y. Kamiuchi, M. Aida, D. Weijers, R. Simon, S. Masiero, L. Colombo, The Plant Journal for Cell and Molecular Biology 76 (2013) 446–455.
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2013 | Journal Article | IST-REx-ID: 831
Sequential induction of auxin efflux and influx carriers regulates lateral root emergence
Péret B, Middleton A, French A, Larrieu A, Bishopp A, Njo M, Wells D, Porco S, Mellor N, Band L, Casimiro I, Kleine Vehn J, Vanneste S, Sairanen I, Mallet R, Sandberg G, Ljung K, Beeckman T, Benková E, Friml J, Kramer E, King J, De Smet I, Pridmore T, Owen M, Bennett M. 2013. Sequential induction of auxin efflux and influx carriers regulates lateral root emergence. Molecular Systems Biology. 9.
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2013 | Journal Article | IST-REx-ID: 8462
Oligomeric states along the folding pathways of β2-microglobulin: Kinetics, thermodynamics, and structure
E. Rennella, T. Cutuil, P. Schanda, I. Ayala, F. Gabel, V. Forge, A. Corazza, G. Esposito, B. Brutscher, Journal of Molecular Biology 425 (2013) 2722–2736.
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2013 | Journal Article | IST-REx-ID: 899
Breen et al. reply
M. Breen, C. Kemena, P. Vlasov, C. Notredame, F. Kondrashov, Nature 497 (2013) E2–E3.
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2013 | Journal Article | IST-REx-ID: 9674
The crystal structures of sintered copper nanoparticles: A molecular dynamics study
B. Cheng, A.H.W. Ngan, International Journal of Plasticity 47 (2013) 65–79.
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2013 | Journal Article | IST-REx-ID: 9676
The sintering and densification behaviour of many copper nanoparticles: A molecular dynamics study
B. Cheng, A.H.W. Ngan, Computational Materials Science 74 (2013) 1–11.
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2013 | Journal Article | IST-REx-ID: 971 | OA
Onset of superconductivity in a voltage-biased normal-superconducting-normal microbridge
M. Serbyn, M. Skvortsov, Physical Review B - Condensed Matter and Materials Physics 87 (2013).
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2013 | Journal Article | IST-REx-ID: 972 | OA
Observation of dirac node formation and mass acquisition in a topological crystalline insulator
Y. Okada, M. Serbyn, H. Lin, D. Walkup, W. Zhou, C. Dhital, M. Neupane, S. Xu, Y. Wang, R. Sankar, F. Chou, A. Bansil, M. Hasan, S. Wilson, L. Fu, V. Madhavan, Science 341 (2013) 1496–1499.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 975 | OA
Universal slow growth of entanglement in interacting strongly disordered systems
M. Serbyn, Z. Papić, D. Abanin, Physical Review Letters 110 (2013).
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2013 | Research Data Reference | IST-REx-ID: 9749
Forgiver triumphs in alternating prisoner's dilemma
B. Zagorsky, J. Reiter, K. Chatterjee, M. Nowak, (2013).
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2944
Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates.
S. Aeschbacher, A. Futschik, M. Beaumont, Molecular Ecology 22 (2013) 987–1002.
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2013 | Journal Article | IST-REx-ID: 894
Color differences among feral pigeons (Columba livia) are not attributable to sequence variation in the coding region of the melanocortin-1 receptor gene MC1R
R. Derelle, F. Kondrashov, V. Arkhipov, H. Corbel, A. Frantz, J. Gasparini, L. Jacquin, G. Jacob, S. Thibault, E. Baudry, BMC Research Notes 6 (2013).
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2013 | Journal Article | IST-REx-ID: 9055
Living crystals of light-activated colloidal surfers
J.A. Palacci, S. Sacanna, A.P. Steinberg, D.J. Pine, P.M. Chaikin, Science 339 (2013) 936–940.
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2013 | Journal Article | IST-REx-ID: 905 | OA
Birds of Mys Shmidta, north Chukotka, Russia
V. Arkhipov, T. Noah, S. Koschkar, F. Kondrashov, Forktail (2013) 25–30.
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2013 | Journal Article | IST-REx-ID: 9153 | OA
Internal tide generation by abyssal hills using analytical theory
A. Melet, M. Nikurashin, C.J. Muller, S. Falahat, J. Nycander, P.G. Timko, B.K. Arbic, J.A. Goff, Journal of Geophysical Research: Oceans 118 (2013) 6303–6318.
[Published Version] View | DOI | Download Published Version (ext.)
 

2013 | Journal Article | IST-REx-ID: 9154 | OA [Published Version] View | DOI | Download Published Version (ext.)
 

2013 | Journal Article | IST-REx-ID: 9167 | OA
Photoactivated colloidal dockers for cargo transportation
J.A. Palacci, S. Sacanna, A. Vatchinsky, P.M. Chaikin, D.J. Pine, Journal of the American Chemical Society 135 (2013) 15978–15981.
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC | arXiv
 

2013 | Journal Article | IST-REx-ID: 921
Alignment of cellular motility forces with tissue flow as a mechanism for efficient wound healing
M. Basan, J. Elgeti, E.B. Hannezo, W. Rappel, H. Levine, PNAS 110 (2013) 2452–2459.
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2013 | Journal Article | IST-REx-ID: 9459 | OA
The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin
A. Zemach, M.Y. Kim, P.-H. Hsieh, D. Coleman-Derr, L. Eshed-Williams, K. Thao, S.L. Harmer, D. Zilberman, Cell 153 (2013) 193–205.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

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