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9078 Publications


2013 | Journal Article | IST-REx-ID: 7775
Stability of jammed packings II: The transverse length scale
S.S. Schoenholz, C.P. Goodrich, O. Kogan, A.J. Liu, S.R. Nagel, Soft Matter 9 (2013).
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2013 | Journal Article | IST-REx-ID: 7774
Stability of jammed packings I: The rigidity length scale
C.P. Goodrich, W.G. Ellenbroek, A.J. Liu, Soft Matter 9 (2013).
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2013 | Journal Article | IST-REx-ID: 8030 | OA
Inhibitory synaptic plasticity: Spike timing-dependence and putative network function
T.P. Vogels, R.C. Froemke, N. Doyon, M. Gilson, J.S. Haas, R. Liu, A. Maffei, P. Miller, C.J. Wierenga, M.A. Woodin, F. Zenke, H. Sprekeler, Frontiers in Neural Circuits 7 (2013).
[Published Version] View | Files available | DOI | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 811
Rac function is crucial for cell migration but is not required for spreading and focal adhesion formation
A. Steffen, M. Ladwein, G.A. Dimchev, A. Hein, L. Schwenkmezger, S. Arens, K. Ladwein, J. Holleboom, F.K. Schur, J. Small, J. Schwarz, R. Gerhard, J. Faix, T. Stradal, C. Brakebusch, K. Rottner, Journal of Cell Science 126 (2013) 4572–4588.
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2013 | Journal Article | IST-REx-ID: 812
Arp2/3 complex is essential for actin network treadmilling as well as for targeting of capping protein and cofilin
S. Koestler, A. Steffen, M. Nemethova, M. Winterhoff, N. Luo, J. Holleboom, J. Krupp, S. Jacob, M. Vinzenz, F.K. Schur, K. Schlüter, P. Gunning, C. Winkler, C. Schmeiser, J. Faix, T. Stradal, J. Small, K. Rottner, Molecular Biology of the Cell 24 (2013) 2861–2875.
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2013 | Journal Article | IST-REx-ID: 810
Determination of protein structure at 8.5Å resolution using cryo-electron tomography and sub-tomogram averaging
F.K. Schur, W. Hagen, A. De Marco, J. Briggs, Journal of Structural Biology 184 (2013) 394–400.
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2013 | Journal Article | IST-REx-ID: 8245 | OA
Trastuzumab mediates antibody-dependent cell-mediated cytotoxicity and phagocytosis to the same extent in both adjuvant and metastatic HER2/neu breast cancer patients
B. Petricevic, J. Laengle, J. Singer, M. Sachet, J. Singer, G. Steger, R. Bartsch, E. Jensen-Jarolim, M. Bergmann, Journal of Translational Medicine 11 (2013).
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2013 | Journal Article | IST-REx-ID: 827 | OA
Cytokinin cross talking during biotic and abiotic stress responses
J. O’Brien, E. Benková, Frontiers in Plant Science 4 (2013).
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 828 | OA
Systems approaches to study root architecture dynamics
C. Cuesta, K.T. Wabnik, E. Benková, Frontiers in Plant Science 4 (2013).
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 830
An integrative model of the control of ovule primordia formation
F. Galbiati, D. Sinha Roy, S. Simonini, M. Cucinotta, L. Ceccato, C. Cuesta, M. Šimášková, E. Benková, Y. Kamiuchi, M. Aida, D. Weijers, R. Simon, S. Masiero, L. Colombo, The Plant Journal for Cell and Molecular Biology 76 (2013) 446–455.
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2013 | Journal Article | IST-REx-ID: 831
Sequential induction of auxin efflux and influx carriers regulates lateral root emergence
Péret B, Middleton A, French A, Larrieu A, Bishopp A, Njo M, Wells D, Porco S, Mellor N, Band L, Casimiro I, Kleine Vehn J, Vanneste S, Sairanen I, Mallet R, Sandberg G, Ljung K, Beeckman T, Benková E, Friml J, Kramer E, King J, De Smet I, Pridmore T, Owen M, Bennett M. 2013. Sequential induction of auxin efflux and influx carriers regulates lateral root emergence. Molecular Systems Biology. 9.
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2013 | Journal Article | IST-REx-ID: 8461
Amplitudes and time scales of picosecond-to-microsecond motion in proteins studied by solid-state NMR: a critical evaluation of experimental approaches and application to crystalline ubiquitin
J.D. Haller, P. Schanda, Journal of Biomolecular NMR 57 (2013) 263–280.
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2013 | Journal Article | IST-REx-ID: 8462
Oligomeric states along the folding pathways of β2-microglobulin: Kinetics, thermodynamics, and structure
E. Rennella, T. Cutuil, P. Schanda, I. Ayala, F. Gabel, V. Forge, A. Corazza, G. Esposito, B. Brutscher, Journal of Molecular Biology 425 (2013) 2722–2736.
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2013 | Journal Article | IST-REx-ID: 899
Breen et al. reply
M. Breen, C. Kemena, P. Vlasov, C. Notredame, F. Kondrashov, Nature 497 (2013) E2–E3.
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2013 | Journal Article | IST-REx-ID: 9674
The crystal structures of sintered copper nanoparticles: A molecular dynamics study
B. Cheng, A.H.W. Ngan, International Journal of Plasticity 47 (2013) 65–79.
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2013 | Journal Article | IST-REx-ID: 9676
The sintering and densification behaviour of many copper nanoparticles: A molecular dynamics study
B. Cheng, A.H.W. Ngan, Computational Materials Science 74 (2013) 1–11.
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2013 | Journal Article | IST-REx-ID: 971 | OA
Onset of superconductivity in a voltage-biased normal-superconducting-normal microbridge
M. Serbyn, M. Skvortsov, Physical Review B - Condensed Matter and Materials Physics 87 (2013).
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2013 | Journal Article | IST-REx-ID: 972 | OA
Observation of dirac node formation and mass acquisition in a topological crystalline insulator
Y. Okada, M. Serbyn, H. Lin, D. Walkup, W. Zhou, C. Dhital, M. Neupane, S. Xu, Y. Wang, R. Sankar, F. Chou, A. Bansil, M. Hasan, S. Wilson, L. Fu, V. Madhavan, Science 341 (2013) 1496–1499.
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 975 | OA
Universal slow growth of entanglement in interacting strongly disordered systems
M. Serbyn, Z. Papić, D. Abanin, Physical Review Letters 110 (2013).
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2013 | Research Data Reference | IST-REx-ID: 9749
Forgiver triumphs in alternating prisoner's dilemma
B. Zagorsky, J. Reiter, K. Chatterjee, M. Nowak, (2013).
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2944
Approximate Bayesian computation for modular inference problems with many parameters: the example of migration rates.
S. Aeschbacher, A. Futschik, M. Beaumont, Molecular Ecology 22 (2013) 987–1002.
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2013 | Journal Article | IST-REx-ID: 894
Color differences among feral pigeons (Columba livia) are not attributable to sequence variation in the coding region of the melanocortin-1 receptor gene MC1R
R. Derelle, F. Kondrashov, V. Arkhipov, H. Corbel, A. Frantz, J. Gasparini, L. Jacquin, G. Jacob, S. Thibault, E. Baudry, BMC Research Notes 6 (2013).
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2013 | Journal Article | IST-REx-ID: 9055
Living crystals of light-activated colloidal surfers
J.A. Palacci, S. Sacanna, A.P. Steinberg, D.J. Pine, P.M. Chaikin, Science 339 (2013) 936–940.
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2013 | Journal Article | IST-REx-ID: 905 | OA
Birds of Mys Shmidta, north Chukotka, Russia
V. Arkhipov, T. Noah, S. Koschkar, F. Kondrashov, Forktail (2013) 25–30.
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2013 | Journal Article | IST-REx-ID: 9153 | OA
Internal tide generation by abyssal hills using analytical theory
A. Melet, M. Nikurashin, C.J. Muller, S. Falahat, J. Nycander, P.G. Timko, B.K. Arbic, J.A. Goff, Journal of Geophysical Research: Oceans 118 (2013) 6303–6318.
[Published Version] View | DOI | Download Published Version (ext.)
 

2013 | Journal Article | IST-REx-ID: 9154 | OA
Impact of convective organization on the response of tropical precipitation extremes to warming
C.J. Muller, Journal of Climate 26 (2013) 5028–5043.
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2013 | Journal Article | IST-REx-ID: 9167 | OA
Photoactivated colloidal dockers for cargo transportation
J.A. Palacci, S. Sacanna, A. Vatchinsky, P.M. Chaikin, D.J. Pine, Journal of the American Chemical Society 135 (2013) 15978–15981.
[Preprint] View | DOI | Download Preprint (ext.) | PubMed | Europe PMC | arXiv
 

2013 | Journal Article | IST-REx-ID: 921
Alignment of cellular motility forces with tissue flow as a mechanism for efficient wound healing
M. Basan, J. Elgeti, E.B. Hannezo, W. Rappel, H. Levine, PNAS 110 (2013) 2452–2459.
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2013 | Journal Article | IST-REx-ID: 9459 | OA
The Arabidopsis nucleosome remodeler DDM1 allows DNA methyltransferases to access H1-containing heterochromatin
A. Zemach, M.Y. Kim, P.-H. Hsieh, D. Coleman-Derr, L. Eshed-Williams, K. Thao, S.L. Harmer, D. Zilberman, Cell 153 (2013) 193–205.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 9481 | OA
Imprinted expression of genes and small RNA is associated with localized hypomethylation of the maternal genome in rice endosperm
J.A. Rodrigues, R. Ruan, T. Nishimura, M.K. Sharma, R. Sharma, P.C. Ronald, R.L. Fischer, D. Zilberman, Proceedings of the National Academy of Sciences 110 (2013) 7934–7939.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 9663 | OA
Thermally induced solid-solid structural transition of copper nanoparticles through direct geometrical conversion
B. Cheng, A.H.W. Ngan, The Journal of Chemical Physics 138 (2013).
[Submitted Version] View | DOI | Download Submitted Version (ext.) | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 9682
Crystal plasticity of Cu nanocrystals during collision
B. Cheng, A.H.W. Ngan, Materials Science and Engineering: A 585 (2013) 326–334.
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2013 | Journal Article | IST-REx-ID: 970 | OA
New Dirac points and multiple Landau level crossings in biased trilayer graphene
M. Serbyn, D. Abanin, Physical Review B - Condensed Matter and Materials Physics 87 (2013).
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2013 | Journal Article | IST-REx-ID: 973 | OA
Local conservation laws and the structure of the many body localized states
M. Serbyn, Z. Papić, D. Abanin, Physical Review Letters 111 (2013).
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2013 | Journal Article | IST-REx-ID: 974 | OA
Overscreened Kondo fixed point in S=1 spin liquid
M. Serbyn, T. Senthil, P. Lee, Physical Review B - Condensed Matter and Materials Physics 88 (2013).
[Preprint] View | DOI | Download Preprint (ext.) | arXiv
 

2013 | Journal Article | IST-REx-ID: 2284 | OA
Pupal cocoons affect sanitary brood care and limit fungal infections in ant colonies
S. Tragust, L.V. Ugelvig, M. Chapuisat, J. Heinze, S. Cremer, BMC Evolutionary Biology 13 (2013).
[Published Version] View | Files available | DOI
 

2013 | Journal Article | IST-REx-ID: 2277 | OA
Transformation of stimulus correlations by the retina
K. Simmons, J. Prentice, G. Tkačik, J. Homann, H. Yee, S. Palmer, P. Nelson, V. Balasubramanian, PLoS Computational Biology 9 (2013).
[Published Version] View | Files available | DOI
 

2013 | Research Data Reference | IST-REx-ID: 9754 | OA
Data from: Likelihood-based inference of population history from low coverage de novo genome assemblies
J. Hearn, G. Stone, N.H. Barton, K. Lohse, L. Bunnefeld, (2013).
[Published Version] View | Files available | DOI | Download Published Version (ext.)
 

2013 | Journal Article | IST-REx-ID: 976 | OA
Spinon-phonon interaction in algebraic spin liquids
M. Serbyn, P. Lee, Physical Review B - Condensed Matter and Materials Physics 87 (2013).
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2013 | Journal Article | IST-REx-ID: 12638 | OA
Comparison of climate change signals in CMIP3 and CMIP5 multi-model ensembles and implications for Central Asian glaciers
A.F. Lutz, W.W. Immerzeel, A. Gobiet, F. Pellicciotti, M.F.P. Bierkens, Hydrology and Earth System Sciences 17 (2013) 3661–3677.
[Published Version] View | DOI | Download Published Version (ext.)
 

2013 | Journal Article | IST-REx-ID: 12639 | OA
Sources of uncertainty in modeling the glaciohydrological response of a Karakoram watershed to climate change
S. Ragettli, F. Pellicciotti, R. Bordoy, W.W. Immerzeel, Water Resources Research 49 (2013) 6048–6066.
[Published Version] View | DOI | Download Published Version (ext.)
 

2013 | Journal Article | IST-REx-ID: 12633
An evaluation of approaches for modelling hydrological processes in high-elevation, glacierized Andean watersheds
S. Ragettli, G. Cortés, J. McPhee, F. Pellicciotti, Hydrological Processes 28 (2013) 5674–5695.
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2013 | Journal Article | IST-REx-ID: 9520 | OA
A conversation across generations: Soma-germ cell crosstalk in plants
X. Feng, D. Zilberman, H. Dickinson, Developmental Cell 24 (2013) 215–225.
[Published Version] View | DOI | Download Published Version (ext.) | PubMed | Europe PMC
 

2013 | Journal Article | IST-REx-ID: 13405
Photocontrol of electrical conductance with a nonsymmetrical azobenzene dithiol
T. Ely, S. Das, W. Li, P. Kundu, E. Tirosh, D. Cahen, A. Vilan, R. Klajn, Synlett 24 (2013) 2370–2374.
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2013 | Journal Article | IST-REx-ID: 13406
Dual-responsive nanoparticles and their self-assembly
S. Das, P. Ranjan, P.S. Maiti, G. Singh, G. Leitus, R. Klajn, Advanced Materials 25 (2013) 422–426.
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2013 | Journal Article | IST-REx-ID: 2914 | OA
Statistical thermodynamics of natural images
G. Stephens, T. Mora, G. Tkačik, W. Bialek, Physical Review Letters 110 (2013).
[Published Version] View | Files available | DOI | arXiv
 

2013 | Book Chapter | IST-REx-ID: 10900
Live Cell Imaging of Chemotactic Dendritic Cell Migration in Explanted Mouse Ear Preparations
M. Weber, M.K. Sixt, in:, A. Cardona, E. Ubogu (Eds.), Chemokines, Humana Press, Totowa, NJ, 2013, pp. 215–226.
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2013 | Book Chapter | IST-REx-ID: 5747 | OA
Automatic Linearizability Proofs of Concurrent Objects with Cooperating Updates
C. Dragoi, A. Gupta, T.A. Henzinger, in:, Computer Aided Verification, Springer Berlin Heidelberg, Berlin, Heidelberg, 2013, pp. 174–190.
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2013 | Conference Paper | IST-REx-ID: 10902
How to travel between languages
K. Chatterjee, S. Chaubal, S. Rubin, in:, 7th International Conference on Language and Automata Theory and Applications, Springer Nature, Berlin, Heidelberg, 2013, pp. 214–225.
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2013 | Conference Paper | IST-REx-ID: 10897
Persistent homology in image processing
H. Edelsbrunner, in:, Graph-Based Representations in Pattern Recognition, Springer Nature, Berlin, Heidelberg, 2013, pp. 182–183.
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