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48 Publications
2012 | Journal Article | IST-REx-ID: 9528
Huff JT, Zilberman D. Regulation of biological accuracy, precision, and memory by plant chromatin organization. Current Opinion in Genetics and Development. 2012;22(2):132-138. doi:10.1016/j.gde.2012.01.007
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2011 | Journal Article | IST-REx-ID: 9483 | 
Hsieh T-F, Shin J, Uzawa R, et al. Regulation of imprinted gene expression in Arabidopsis endosperm. Proceedings of the National Academy of Sciences. 2011;108(5):1755-1762. doi:10.1073/pnas.1019273108
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2011 | Other Publication | IST-REx-ID: 9522 |
Zilberman D. Balancing Parental Contributions in Plant Embryonic Gene Activation. Vol 20. Elsevier; 2011:735-736. doi:10.1016/j.devcel.2011.05.018
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2010 | Journal Article | IST-REx-ID: 9485 |
Zemach A, Kim MY, Silva P, et al. Local DNA hypomethylation activates genes in rice endosperm. Proceedings of the National Academy of Sciences. 2010;107(43):18729-18734. doi:10.1073/pnas.1009695107
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2010 | Journal Article | IST-REx-ID: 9489 |
Zemach A, Zilberman D. Evolution of eukaryotic DNA methylation and the pursuit of safer sex. Current Biology. 2010;20(17):R780-R785. doi:10.1016/j.cub.2010.07.007
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2010 | Journal Article | IST-REx-ID: 9452
Zemach A, McDaniel IE, Silva P, Zilberman D. Genome-wide evolutionary analysis of eukaryotic DNA methylation. Science. 2010;328(5980):916-919. doi:10.1126/science.1186366
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2009 | Journal Article | IST-REx-ID: 9453 |
Hsieh T-F, Ibarra CA, Silva P, et al. Genome-wide demethylation of Arabidopsis endosperm. Science. 2009;324(5933):1451-1454. doi:10.1126/science.1172417
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2008 | Journal Article | IST-REx-ID: 9537
Zilberman D. The evolving functions of DNA methylation. Current Opinion in Plant Biology. 2008;11(5):554-559. doi:10.1016/j.pbi.2008.07.004
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2008 | Journal Article | IST-REx-ID: 9457 |
Zilberman D, Coleman-Derr D, Ballinger T, Henikoff S. Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks. Nature. 2008;456(7218):125-129. doi:10.1038/nature07324
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2007 | Journal Article | IST-REx-ID: 9487 |
Penterman J, Zilberman D, Huh JH, Ballinger T, Henikoff S, Fischer RL. DNA demethylation in the Arabidopsis genome. Proceedings of the National Academy of Sciences. 2007;104(16):6752-6757. doi:10.1073/pnas.0701861104
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2007 | Other Publication | IST-REx-ID: 9504
Zilberman D. The Human Promoter Methylome. Vol 39. Nature Publishing Group; 2007:442-443. doi:10.1038/ng0407-442
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2007 | Journal Article | IST-REx-ID: 9524 |
Zilberman D, Henikoff S. Genome-wide analysis of DNA methylation patterns. Development. 2007;134(22):3959-3965. doi:10.1242/dev.001131
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2006 | Journal Article | IST-REx-ID: 9505
Zilberman D, Gehring M, Tran RK, Ballinger T, Henikoff S. Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nature Genetics. 2006;39(1):61-69. doi:10.1038/ng1929
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2005 | Journal Article | IST-REx-ID: 9491 |
Tran RK, Henikoff JG, Zilberman D, Ditt RF, Jacobsen SE, Henikoff S. DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes. Current Biology. 2005;15(2):154-159. doi:10.1016/j.cub.2005.01.008
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2005 | Journal Article | IST-REx-ID: 9514 |
Tran RK, Zilberman D, de Bustos C, et al. Chromatin and siRNA pathways cooperate to maintain DNA methylation of small transposable elements in Arabidopsis. Genome Biology. 2005;6(11). doi:10.1186/gb-2005-6-11-r90
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2005 | Journal Article | IST-REx-ID: 9529
Zilberman D, Henikoff S. Epigenetic inheritance in Arabidopsis: Selective silence. Current Opinion in Genetics and Development. 2005;15(5):557-562. doi:10.1016/j.gde.2005.07.002
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2004 | Journal Article | IST-REx-ID: 9493 |
Zilberman D, Cao X, Johansen LK, Xie Z, Carrington JC, Jacobsen SE. Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats. Current Biology. 2004;14(13):1214-1220. doi:10.1016/j.cub.2004.06.055
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2004 | Journal Article | IST-REx-ID: 9517 |
Xie Z, Johansen LK, Gustafson AM, et al. Genetic and functional diversification of small RNA pathways in plants. PLoS Biology. 2004;2(5):0642-0652. doi:10.1371/journal.pbio.0020104
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2004 | Journal Article | IST-REx-ID: 9511 |
Zilberman D, Henikoff S. Silencing of transposons in plant genomes: kick them when they’re down. Genome Biology. 2004;5(12). doi:10.1186/gb-2004-5-12-249
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2004 | Journal Article | IST-REx-ID: 9454
Chan SW-L, Zilberman D, Xie Zhixin, Johansen Lisa K., Carrington JC, Jacobsen SE. RNA silencing genes control de novo DNA methylation. Science. 2004;303(5662):1336. doi:10.1126/science.1095989
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