Please note that LibreCat no longer supports Internet Explorer versions 8 or 9 (or earlier).
We recommend upgrading to the latest Internet Explorer, Google Chrome, or Firefox.
5339 Publications
2009 | Published | Conference Paper | IST-REx-ID: 3844 | 
Henzinger TA, Kirsch C, Marques E, Sokolova A. Distributed, modular HTL. In: IEEE; 2009:171-180. doi:10.1109/RTSS.2009.9
[Submitted Version]
View
| Files available
| DOI
2009 | Published | Journal Article | IST-REx-ID: 3870 |
Chatterjee K, Henzinger TA, Horn F. Finitary winning in omega-regular games. ACM Transactions on Computational Logic (TOCL). 2009;11(1). doi:10.1145/1614431.1614432
[Submitted Version]
View
| Files available
| DOI
2009 | Published | Conference Paper | IST-REx-ID: 3871 |
Chatterjee K, Doyen L, Henzinger TA. Probabilistic weighted automata. In: Vol 5710. Springer; 2009:244-258. doi:10.1007/978-3-642-04081-8_17
[Submitted Version]
View
| Files available
| DOI
2009 | Published | Conference Paper | IST-REx-ID: 3968 |
Edelsbrunner H, Harer J. The persistent Morse complex segmentation of a 3-manifold. In: Vol 5903. Springer; 2009:36-50. doi:10.1007/978-3-642-10470-1_4
[Submitted Version]
View
| Files available
| DOI
2009 | Published | Journal Article | IST-REx-ID: 4136 |
Polechova J, Barton NH, Marion G. Species’ range: Adaptation in space and time. American Naturalist. 2009;174(5):E186-E204. doi:10.1086/605958
[Published Version]
View
| Files available
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
2008 | Published | Journal Article | IST-REx-ID: 9537
Zilberman D. The evolving functions of DNA methylation. Current Opinion in Plant Biology. 2008;11(5):554-559. doi:10.1016/j.pbi.2008.07.004
View
| DOI
| PubMed | Europe PMC
2008 | Published | Journal Article | IST-REx-ID: 9457 |
Zilberman D, Coleman-Derr D, Ballinger T, Henikoff S. Histone H2A.Z and DNA methylation are mutually antagonistic chromatin marks. Nature. 2008;456(7218):125-129. doi:10.1038/nature07324
[Submitted Version]
View
| DOI
| Download Submitted Version (ext.)
| PubMed | Europe PMC
2008 | Published | Journal Article | IST-REx-ID: 517
Barton NH. Identity and coalescence in structured populations: A commentary on “Inbreeding coefficients and coalescence times” by Montgomery Slatkin. Genetics Research. 2008;89(5-6):475-477. doi:10.1017/S0016672308009683
View
| DOI
2007 | Published | Journal Article | IST-REx-ID: 9487 |
Penterman J, Zilberman D, Huh JH, Ballinger T, Henikoff S, Fischer RL. DNA demethylation in the Arabidopsis genome. Proceedings of the National Academy of Sciences. 2007;104(16):6752-6757. doi:10.1073/pnas.0701861104
[Published Version]
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
2007 | Published | Other Publication | IST-REx-ID: 9504
Zilberman D. The Human Promoter Methylome. Vol 39. Nature Publishing Group; 2007:442-443. doi:10.1038/ng0407-442
View
| DOI
| PubMed | Europe PMC
2007 | Published | Journal Article | IST-REx-ID: 9524 |
Zilberman D, Henikoff S. Genome-wide analysis of DNA methylation patterns. Development. 2007;134(22):3959-3965. doi:10.1242/dev.001131
[Published Version]
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
2007 | Published | Journal Article | IST-REx-ID: 12201
Feng X, Dickinson HG. Packaging the male germline in plants. Trends in Genetics. 2007;23(10):503-510. doi:10.1016/j.tig.2007.08.005
View
| DOI
| PubMed | Europe PMC
2006 | Published | Journal Article | IST-REx-ID: 9505
Zilberman D, Gehring M, Tran RK, Ballinger T, Henikoff S. Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an interdependence between methylation and transcription. Nature Genetics. 2006;39(1):61-69. doi:10.1038/ng1929
View
| DOI
| PubMed | Europe PMC
2005 | Published | Journal Article | IST-REx-ID: 9491 |
Tran RK, Henikoff JG, Zilberman D, Ditt RF, Jacobsen SE, Henikoff S. DNA methylation profiling identifies CG methylation clusters in Arabidopsis genes. Current Biology. 2005;15(2):154-159. doi:10.1016/j.cub.2005.01.008
[Published Version]
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
2005 | Published | Journal Article | IST-REx-ID: 9514 |
Tran RK, Zilberman D, de Bustos C, et al. Chromatin and siRNA pathways cooperate to maintain DNA methylation of small transposable elements in Arabidopsis. Genome Biology. 2005;6(11). doi:10.1186/gb-2005-6-11-r90
[Published Version]
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
2005 | Published | Journal Article | IST-REx-ID: 9529
Zilberman D, Henikoff S. Epigenetic inheritance in Arabidopsis: Selective silence. Current Opinion in Genetics and Development. 2005;15(5):557-562. doi:10.1016/j.gde.2005.07.002
View
| DOI
| PubMed | Europe PMC
2004 | Published | Journal Article | IST-REx-ID: 9493 |
Zilberman D, Cao X, Johansen LK, Xie Z, Carrington JC, Jacobsen SE. Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats. Current Biology. 2004;14(13):1214-1220. doi:10.1016/j.cub.2004.06.055
[Published Version]
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
2004 | Published | Journal Article | IST-REx-ID: 9511 |
Zilberman D, Henikoff S. Silencing of transposons in plant genomes: kick them when they’re down. Genome Biology. 2004;5(12). doi:10.1186/gb-2004-5-12-249
[Published Version]
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
2004 | Published | Journal Article | IST-REx-ID: 9517 |
Xie Z, Johansen LK, Gustafson AM, et al. Genetic and functional diversification of small RNA pathways in plants. PLoS Biology. 2004;2(5):0642-0652. doi:10.1371/journal.pbio.0020104
[Published Version]
View
| DOI
| Download Published Version (ext.)
| PubMed | Europe PMC
2004 | Published | Journal Article | IST-REx-ID: 9454
Chan SW-L, Zilberman D, Xie Zhixin, Johansen Lisa K., Carrington JC, Jacobsen SE. RNA silencing genes control de novo DNA methylation. Science. 2004;303(5662):1336. doi:10.1126/science.1095989
View
| DOI
| PubMed | Europe PMC