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6023 Publications
2025 | Published | Journal Article | IST-REx-ID: 18778 |
Mechanism of mammalian transcriptional repression by noncoding RNA
K. Tluckova, B.M. Kaczmarek, A.P. Testa Salmazo, C. Bernecky, Nature Structural & Molecular Biology 32 (2025) 607–612.
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K. Tluckova, B.M. Kaczmarek, A.P. Testa Salmazo, C. Bernecky, Nature Structural & Molecular Biology 32 (2025) 607–612.
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 20657 |
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Maximum Betti numbers of Čech complexes
H. Edelsbrunner, J. Pach, Discrete & Computational Geometry (2025).
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H. Edelsbrunner, J. Pach, Discrete & Computational Geometry (2025).
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 20670 |
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Lumen charge governs gated ion transport in β-barrel nanopores
Mayer S, Mitsioni MF, Robin P, Van Den Heuvel L, Ronceray N, Marcaida MJ, Abriata LA, Krapp LF, Anton JS, Soussou S, Jeanneret-Grosjean J, Fulciniti A, Möller A, Vacle S, Feletti L, Brinkerhoff H, Laszlo AH, Gundlach JH, Emmerich T, Dal Peraro M, Radenovic A. 2025. Lumen charge governs gated ion transport in β-barrel nanopores. Nature Nanotechnology.
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Mayer S, Mitsioni MF, Robin P, Van Den Heuvel L, Ronceray N, Marcaida MJ, Abriata LA, Krapp LF, Anton JS, Soussou S, Jeanneret-Grosjean J, Fulciniti A, Möller A, Vacle S, Feletti L, Brinkerhoff H, Laszlo AH, Gundlach JH, Emmerich T, Dal Peraro M, Radenovic A. 2025. Lumen charge governs gated ion transport in β-barrel nanopores. Nature Nanotechnology.
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 20669 |
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Quantifying the seasonal dynamics of a transitional ice cliff-pond system on a debris-covered glacier
Z. He, M. Westoby, S. REN, C. Zhao, Y. He, T. Zhang, W. Yang, Journal of Glaciology (2025).
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Z. He, M. Westoby, S. REN, C. Zhao, Y. He, T. Zhang, W. Yang, Journal of Glaciology (2025).
2025 | Published | Journal Article | IST-REx-ID: 20662 |
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Generating synthetic task-based brain fingerprints for population neuroscience using deep learning
Serin E, Ritter K, Schumann G, Banaschewski T, Marquand A, Walter H, Ogoh G, Stahl BC, Brandlistuen R, Schikowski T, Young AH, Xinyang Y, Zhang Z, Agunbiade K, Chen D, Desrivières S, Clinton N, Thompson P, Köhler V, Schwalber A, Calhoun VD, Chang X, Zhang Y, Li Y, Dai Y, Yuan J, Xia Y, Jia T, Renner P, Hese S, Spanlang B, Pearmund C, Athanasiadis AP, Petkoski S, Jirsa V, Schmitt K, Wilbertz JH, Patraskaki M, Sommer P, Heilmann-Heimbach S, Mathey CM, Miller AJ, Claus I, Nöthen MM, Hoffmann P, Forstner AJ, Pastor A, Gallego J, Itatani R, Eiroa-Orosa F, Feixas G, Slater M, Novarino G, Böttger SJ, Tschorn M, Rapp M, Ask H, Kjelkenes R, Fernandez S, Van Der Meer D, Westlye LT, Andreassen OA, Aden R, Seefried B, Nees F, Neidhart M, Stringaris A, Schwarz E, Holz N, Tost H, Meyer-Lindenberg A, Christmann N, Janson K, Schepanski K, Schütz T, Taron UH, Eils R, Roy JC, Lett TA, Kebir H, Polemiti E, Hitchen E, Jentsch M, Serin E, Bernas A, Vaidya N, Twardziok S, Ralser M, Heinz A, Schumann G. 2025. Generating synthetic task-based brain fingerprints for population neuroscience using deep learning. Communications Biology. 8, 1572.
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Serin E, Ritter K, Schumann G, Banaschewski T, Marquand A, Walter H, Ogoh G, Stahl BC, Brandlistuen R, Schikowski T, Young AH, Xinyang Y, Zhang Z, Agunbiade K, Chen D, Desrivières S, Clinton N, Thompson P, Köhler V, Schwalber A, Calhoun VD, Chang X, Zhang Y, Li Y, Dai Y, Yuan J, Xia Y, Jia T, Renner P, Hese S, Spanlang B, Pearmund C, Athanasiadis AP, Petkoski S, Jirsa V, Schmitt K, Wilbertz JH, Patraskaki M, Sommer P, Heilmann-Heimbach S, Mathey CM, Miller AJ, Claus I, Nöthen MM, Hoffmann P, Forstner AJ, Pastor A, Gallego J, Itatani R, Eiroa-Orosa F, Feixas G, Slater M, Novarino G, Böttger SJ, Tschorn M, Rapp M, Ask H, Kjelkenes R, Fernandez S, Van Der Meer D, Westlye LT, Andreassen OA, Aden R, Seefried B, Nees F, Neidhart M, Stringaris A, Schwarz E, Holz N, Tost H, Meyer-Lindenberg A, Christmann N, Janson K, Schepanski K, Schütz T, Taron UH, Eils R, Roy JC, Lett TA, Kebir H, Polemiti E, Hitchen E, Jentsch M, Serin E, Bernas A, Vaidya N, Twardziok S, Ralser M, Heinz A, Schumann G. 2025. Generating synthetic task-based brain fingerprints for population neuroscience using deep learning. Communications Biology. 8, 1572.
2025 | Published | Journal Article | IST-REx-ID: 20661 |
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Quantifying spectroscopic flux variations between JWST NIRISS and NIRSpec: Slit losses in emission line measurements of z ∼ 1-3 galaxies
N. Dalmasso, P.J. Watson, T. Treu, M. Trenti, B. Vulcani, T. Nanayakkara, M. Bradač, T. Jones, K. Boyett, X. Wang, S. Mascia, L. Pentericci, Monthly Notices of the Royal Astronomical Society 544 (2025) 1915–1925.
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N. Dalmasso, P.J. Watson, T. Treu, M. Trenti, B. Vulcani, T. Nanayakkara, M. Bradač, T. Jones, K. Boyett, X. Wang, S. Mascia, L. Pentericci, Monthly Notices of the Royal Astronomical Society 544 (2025) 1915–1925.
2025 | Published | Journal Article | IST-REx-ID: 20664 |
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Quantifying the carbon footprint of conference travel: The case of NMR meetings
L. Kapoor, N. Ruzickova, P. Zivadinovic, V. Leitner, M.A. Sisak, C.N. Mweka, J.A. Dobbelaere, G. Katsaros, P. Schanda, Magnetic Resonance 6 (2025) 243–256.
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L. Kapoor, N. Ruzickova, P. Zivadinovic, V. Leitner, M.A. Sisak, C.N. Mweka, J.A. Dobbelaere, G. Katsaros, P. Schanda, Magnetic Resonance 6 (2025) 243–256.
2025 | Published | Journal Article | IST-REx-ID: 20666 |
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Competition of light-and phonon-dressing in microwave-dressed Bose polarons
G. Koutentakis, S.I. Mistakidis, F. Grusdt, H.R. Sadeghpour, P. Schmelcher, Scipost Physics 19 (2025).
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G. Koutentakis, S.I. Mistakidis, F. Grusdt, H.R. Sadeghpour, P. Schmelcher, Scipost Physics 19 (2025).
2025 | Published | Journal Article | IST-REx-ID: 20663 |
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Angle dependence as a unifying feature of root graviresponse modules
S. Roychoudhry, K. Sageman-Furnas, H.J. Taylor, I. Showpnil, C. Wolverton, J. Friml, M.D. Bianco, S. Kepinski, Proceedings of the National Academy of Sciences of the United States of America 122 (2025) e2506400122.
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S. Roychoudhry, K. Sageman-Furnas, H.J. Taylor, I. Showpnil, C. Wolverton, J. Friml, M.D. Bianco, S. Kepinski, Proceedings of the National Academy of Sciences of the United States of America 122 (2025) e2506400122.
2025 | Research Data | IST-REx-ID: 20242 |
Data of: "Quantifying the carbon footprint of conference travel: the case of NMR meetings"
P. Schanda, (2025).
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P. Schanda, (2025).
2025 | Published | Conference Paper | IST-REx-ID: 20667
Mean estimation in high-dimensional binary timeinhomogeneous Markov Gaussian mixture models
A. El Latif Kadry, Y. Zhang, N. Weinberger, in:, 2025 IEEE International Symposium on Information Theory Proceedings, IEEE, 2025.
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A. El Latif Kadry, Y. Zhang, N. Weinberger, in:, 2025 IEEE International Symposium on Information Theory Proceedings, IEEE, 2025.
2025 | Published | Journal Article | IST-REx-ID: 20656 |
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ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin fluxes for root gravitropism
Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Kulich I, Jaillais Y, Friml J. 2025. ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin fluxes for root gravitropism. Cell. 188(22), 6138–6150.e17.
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Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Kulich I, Jaillais Y, Friml J. 2025. ABP1/ABL3-TMK1 cell-surface auxin signaling targets PIN2-mediated auxin fluxes for root gravitropism. Cell. 188(22), 6138–6150.e17.
2025 | Published | Journal Article | IST-REx-ID: 20660 |
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The JWST Emission Line Survey (JELS): The sizes and merger fraction of star-forming galaxies during the Epoch of Reionization
Stephenson HMO, Stott JP, Pirie CA, Duncan KJ, Mcleod DJ, Best PN, Brinch M, Clausen M, Cochrane RK, Dunlop JS, Flury SR, Geach JE, Hale CL, Ibar E, Li Z, Matthee JJ, Mclure RJ, Ossa-Fuentes L, Patrick AL, Sobral D, Swinbank AM. 2025. The JWST Emission Line Survey (JELS): The sizes and merger fraction of star-forming galaxies during the Epoch of Reionization. Monthly Notices of the Royal Astronomical Society. 544(2), 1412–1431.
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Stephenson HMO, Stott JP, Pirie CA, Duncan KJ, Mcleod DJ, Best PN, Brinch M, Clausen M, Cochrane RK, Dunlop JS, Flury SR, Geach JE, Hale CL, Ibar E, Li Z, Matthee JJ, Mclure RJ, Ossa-Fuentes L, Patrick AL, Sobral D, Swinbank AM. 2025. The JWST Emission Line Survey (JELS): The sizes and merger fraction of star-forming galaxies during the Epoch of Reionization. Monthly Notices of the Royal Astronomical Society. 544(2), 1412–1431.
2025 | Published | Journal Article | IST-REx-ID: 20659 |
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Developmental regulation of GABAB receptors and downstream molecules in the mouse brain
C. Aguado, R. Alfaro-Ruiz, M.L. Martínez-Poyato, A.E. Moreno-Martínez, S. García-Madrona, A. Roldán-Sastre, P. Alonso-Gómez, M. Fernández, R. Puertas-Avendaño, R. Shigemoto, K.A. Martemyanov, R. Luján, Histology and Histopathology 40 (2025) 1967–1984.
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C. Aguado, R. Alfaro-Ruiz, M.L. Martínez-Poyato, A.E. Moreno-Martínez, S. García-Madrona, A. Roldán-Sastre, P. Alonso-Gómez, M. Fernández, R. Puertas-Avendaño, R. Shigemoto, K.A. Martemyanov, R. Luján, Histology and Histopathology 40 (2025) 1967–1984.
2025 | Draft | Preprint | IST-REx-ID: 19399 |
ABP1/ABL3-TMK1 cell-surface auxin signaling directly targets PIN2-mediated auxin fluxes for root gravitropism
Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Xu T, Kulich I, Jaillais Y, Friml J. ABP1/ABL3-TMK1 cell-surface auxin signaling directly targets PIN2-mediated auxin fluxes for root gravitropism. bioRxiv, 10.1101/2022.11.30.518503.
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Rodriguez Solovey L, Fiedler L, Zou M, Giannini C, Monzer A, Vladimirtsev D, Randuch M, Yu Y, Gelová Z, Verstraeten I, Hajny J, Chen M, Tan S, Hörmayer L, Li L, Marques-Bueno MM, Quddoos Z, Molnar G, Xu T, Kulich I, Jaillais Y, Friml J. ABP1/ABL3-TMK1 cell-surface auxin signaling directly targets PIN2-mediated auxin fluxes for root gravitropism. bioRxiv, 10.1101/2022.11.30.518503.
2025 | Epub ahead of print | Journal Article | IST-REx-ID: 20655 |
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A century of theories of balancing selection
F. Ruzicka, M.K. Zwoinska, D. Goedert, H. Kokko, X. Li Richter, I.R. Moodie, S. Nilén, C. Olito, E.I. Svensson, P. Czuppon, T. Connallon, Biological Reviews (2025).
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F. Ruzicka, M.K. Zwoinska, D. Goedert, H. Kokko, X. Li Richter, I.R. Moodie, S. Nilén, C. Olito, E.I. Svensson, P. Czuppon, T. Connallon, Biological Reviews (2025).
2025 | Published | Conference Paper | IST-REx-ID: 20658 |
The mid-sphere cousin of the medial axis transform
H. Edelsbrunner, E.R. Stephenson, M.H. Thoresen, in:, 4th International Joint Conference on Discrete Geometry and Mathematical Morphology, Springer Nature, 2025, pp. 133–147.
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H. Edelsbrunner, E.R. Stephenson, M.H. Thoresen, in:, 4th International Joint Conference on Discrete Geometry and Mathematical Morphology, Springer Nature, 2025, pp. 133–147.
2025 | Published | Journal Article | IST-REx-ID: 20646 |
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Finding periodic orbits in projected quantum many-body dynamics
E. Petrova, M. Ljubotina, G. Yalniz, M. Serbyn, PRX Quantum 6 (2025).
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E. Petrova, M. Ljubotina, G. Yalniz, M. Serbyn, PRX Quantum 6 (2025).
2025 | Published | Journal Article | IST-REx-ID: 20649 |
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Escape fractions from unattenuated Lyα emitters around luminous z > 6 quasars
M. Yue, A.C. Eilers, J.J. Matthee, R.P. Naidu, R. Bordoloi, F.B. Davies, J.F. Hennawi, D. Kashino, R. Mackenzie, R.A. Simcoe, Astrophysical Journal Letters 993 (2025).
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M. Yue, A.C. Eilers, J.J. Matthee, R.P. Naidu, R. Bordoloi, F.B. Davies, J.F. Hennawi, D. Kashino, R. Mackenzie, R.A. Simcoe, Astrophysical Journal Letters 993 (2025).
2025 | Published | Conference Paper | IST-REx-ID: 20648 |
PolyQEnt: A polynomial quantified entailment solver
K. Chatterjee, A.K. Goharshady, E. Goharshady, M. Karrabi, M. Saadat, M. Seeliger, D. Zikelic, in:, 23rd International Symposium on Automated Technology for Verification and Analysis, Springer Nature, 2025, pp. 411–424.
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K. Chatterjee, A.K. Goharshady, E. Goharshady, M. Karrabi, M. Saadat, M. Seeliger, D. Zikelic, in:, 23rd International Symposium on Automated Technology for Verification and Analysis, Springer Nature, 2025, pp. 411–424.