Thomas R Sokolowski

Tkacik Group

7 Publications

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[7]
2025 | Published | Journal Article | IST-REx-ID: 18849 | OA
Sokolowski TR, Gregor T, Bialek W, Tkačik G. Deriving a genetic regulatory network from an optimization principle. Proceedings of the National Academy of Sciences of the United States of America. 2025;122(1). doi:10.1073/pnas.2402925121
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[6]
2021 | Published | Journal Article | IST-REx-ID: 7553 | OA
Mlynarski WF, Hledik M, Sokolowski TR, Tkačik G. Statistical analysis and optimality of neural systems. Neuron. 2021;109(7):1227-1241.e5. doi:10.1016/j.neuron.2021.01.020
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS
 
[5]
2019 | Published | Journal Article | IST-REx-ID: 7422 | OA
Sokolowski TR, Paijmans J, Bossen L, et al. eGFRD in all dimensions. The Journal of Chemical Physics. 2019;150(5). doi:10.1063/1.5064867
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
[4]
2019 | Published | Conference Paper | IST-REx-ID: 7606 | OA
Hledik M, Sokolowski TR, Tkačik G. A tight upper bound on mutual information. In: IEEE Information Theory Workshop, ITW 2019. IEEE; 2019. doi:10.1109/ITW44776.2019.8989292
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 
[3]
2016 | Published | Journal Article | IST-REx-ID: 1242 | OA
Sokolowski TR, Walczak A, Bialek W, Tkačik G. Extending the dynamic range of transcription factor action by translational regulation. Physical Review E Statistical Nonlinear and Soft Matter Physics. 2016;93(2). doi:10.1103/PhysRevE.93.022404
[Preprint] View | DOI | Download Preprint (ext.)
 
[2]
2016 | Published | Journal Article | IST-REx-ID: 1244 | OA
Recouvreux P, Sokolowski TR, Grammoustianou A, Tenwolde P, Dogterom M. Chimera proteins with affinity for membranes and microtubule tips polarize in the membrane of fission yeast cells. PNAS. 2016;113(7):1811-1816. doi:10.1073/pnas.1419248113
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[1]
2015 | Published | Journal Article | IST-REx-ID: 1940 | OA
Sokolowski TR, Tkačik G. Optimizing information flow in small genetic networks. IV. Spatial coupling. Physical Review E Statistical Nonlinear and Soft Matter Physics. 2015;91(6). doi:10.1103/PhysRevE.91.062710
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7 Publications

Mark all

[7]
2025 | Published | Journal Article | IST-REx-ID: 18849 | OA
Sokolowski TR, Gregor T, Bialek W, Tkačik G. Deriving a genetic regulatory network from an optimization principle. Proceedings of the National Academy of Sciences of the United States of America. 2025;122(1). doi:10.1073/pnas.2402925121
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[6]
2021 | Published | Journal Article | IST-REx-ID: 7553 | OA
Mlynarski WF, Hledik M, Sokolowski TR, Tkačik G. Statistical analysis and optimality of neural systems. Neuron. 2021;109(7):1227-1241.e5. doi:10.1016/j.neuron.2021.01.020
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS
 
[5]
2019 | Published | Journal Article | IST-REx-ID: 7422 | OA
Sokolowski TR, Paijmans J, Bossen L, et al. eGFRD in all dimensions. The Journal of Chemical Physics. 2019;150(5). doi:10.1063/1.5064867
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
[4]
2019 | Published | Conference Paper | IST-REx-ID: 7606 | OA
Hledik M, Sokolowski TR, Tkačik G. A tight upper bound on mutual information. In: IEEE Information Theory Workshop, ITW 2019. IEEE; 2019. doi:10.1109/ITW44776.2019.8989292
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 
[3]
2016 | Published | Journal Article | IST-REx-ID: 1242 | OA
Sokolowski TR, Walczak A, Bialek W, Tkačik G. Extending the dynamic range of transcription factor action by translational regulation. Physical Review E Statistical Nonlinear and Soft Matter Physics. 2016;93(2). doi:10.1103/PhysRevE.93.022404
[Preprint] View | DOI | Download Preprint (ext.)
 
[2]
2016 | Published | Journal Article | IST-REx-ID: 1244 | OA
Recouvreux P, Sokolowski TR, Grammoustianou A, Tenwolde P, Dogterom M. Chimera proteins with affinity for membranes and microtubule tips polarize in the membrane of fission yeast cells. PNAS. 2016;113(7):1811-1816. doi:10.1073/pnas.1419248113
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[1]
2015 | Published | Journal Article | IST-REx-ID: 1940 | OA
Sokolowski TR, Tkačik G. Optimizing information flow in small genetic networks. IV. Spatial coupling. Physical Review E Statistical Nonlinear and Soft Matter Physics. 2015;91(6). doi:10.1103/PhysRevE.91.062710
[Preprint] View | DOI | Download Preprint (ext.)
 
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Citation Style: AMA

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