Thomas R Sokolowski

Tkacik Group

7 Publications

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[7]
2025 | Published | Journal Article | IST-REx-ID: 18849 | OA
T. R. Sokolowski, T. Gregor, W. Bialek, and G. Tkačik, “Deriving a genetic regulatory network from an optimization principle,” Proceedings of the National Academy of Sciences of the United States of America, vol. 122, no. 1. National Academy of Sciences, 2025.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[6]
2021 | Published | Journal Article | IST-REx-ID: 7553 | OA
W. F. Mlynarski, M. Hledik, T. R. Sokolowski, and G. Tkačik, “Statistical analysis and optimality of neural systems,” Neuron, vol. 109, no. 7. Cell Press, p. 1227–1241.e5, 2021.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS
 
[5]
2019 | Published | Journal Article | IST-REx-ID: 7422 | OA
T. R. Sokolowski et al., “eGFRD in all dimensions,” The Journal of Chemical Physics, vol. 150, no. 5. AIP Publishing, 2019.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
[4]
2019 | Published | Conference Paper | IST-REx-ID: 7606 | OA
M. Hledik, T. R. Sokolowski, and G. Tkačik, “A tight upper bound on mutual information,” in IEEE Information Theory Workshop, ITW 2019, Visby, Sweden, 2019.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 
[3]
2016 | Published | Journal Article | IST-REx-ID: 1242 | OA
T. R. Sokolowski, A. Walczak, W. Bialek, and G. Tkačik, “Extending the dynamic range of transcription factor action by translational regulation,” Physical Review E Statistical Nonlinear and Soft Matter Physics, vol. 93, no. 2. American Institute of Physics, 2016.
[Preprint] View | DOI | Download Preprint (ext.)
 
[2]
2016 | Published | Journal Article | IST-REx-ID: 1244 | OA
P. Recouvreux, T. R. Sokolowski, A. Grammoustianou, P. Tenwolde, and M. Dogterom, “Chimera proteins with affinity for membranes and microtubule tips polarize in the membrane of fission yeast cells,” PNAS, vol. 113, no. 7. National Academy of Sciences, pp. 1811–1816, 2016.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[1]
2015 | Published | Journal Article | IST-REx-ID: 1940 | OA
T. R. Sokolowski and G. Tkačik, “Optimizing information flow in small genetic networks. IV. Spatial coupling,” Physical Review E Statistical Nonlinear and Soft Matter Physics, vol. 91, no. 6. American Institute of Physics, 2015.
[Preprint] View | DOI | Download Preprint (ext.)
 
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7 Publications

Mark all

[7]
2025 | Published | Journal Article | IST-REx-ID: 18849 | OA
T. R. Sokolowski, T. Gregor, W. Bialek, and G. Tkačik, “Deriving a genetic regulatory network from an optimization principle,” Proceedings of the National Academy of Sciences of the United States of America, vol. 122, no. 1. National Academy of Sciences, 2025.
[Published Version] View | Files available | DOI | WoS | PubMed | Europe PMC
 
[6]
2021 | Published | Journal Article | IST-REx-ID: 7553 | OA
W. F. Mlynarski, M. Hledik, T. R. Sokolowski, and G. Tkačik, “Statistical analysis and optimality of neural systems,” Neuron, vol. 109, no. 7. Cell Press, p. 1227–1241.e5, 2021.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS
 
[5]
2019 | Published | Journal Article | IST-REx-ID: 7422 | OA
T. R. Sokolowski et al., “eGFRD in all dimensions,” The Journal of Chemical Physics, vol. 150, no. 5. AIP Publishing, 2019.
[Preprint] View | DOI | Download Preprint (ext.) | WoS | arXiv
 
[4]
2019 | Published | Conference Paper | IST-REx-ID: 7606 | OA
M. Hledik, T. R. Sokolowski, and G. Tkačik, “A tight upper bound on mutual information,” in IEEE Information Theory Workshop, ITW 2019, Visby, Sweden, 2019.
[Preprint] View | Files available | DOI | Download Preprint (ext.) | WoS | arXiv
 
[3]
2016 | Published | Journal Article | IST-REx-ID: 1242 | OA
T. R. Sokolowski, A. Walczak, W. Bialek, and G. Tkačik, “Extending the dynamic range of transcription factor action by translational regulation,” Physical Review E Statistical Nonlinear and Soft Matter Physics, vol. 93, no. 2. American Institute of Physics, 2016.
[Preprint] View | DOI | Download Preprint (ext.)
 
[2]
2016 | Published | Journal Article | IST-REx-ID: 1244 | OA
P. Recouvreux, T. R. Sokolowski, A. Grammoustianou, P. Tenwolde, and M. Dogterom, “Chimera proteins with affinity for membranes and microtubule tips polarize in the membrane of fission yeast cells,” PNAS, vol. 113, no. 7. National Academy of Sciences, pp. 1811–1816, 2016.
[Submitted Version] View | DOI | Download Submitted Version (ext.)
 
[1]
2015 | Published | Journal Article | IST-REx-ID: 1940 | OA
T. R. Sokolowski and G. Tkačik, “Optimizing information flow in small genetic networks. IV. Spatial coupling,” Physical Review E Statistical Nonlinear and Soft Matter Physics, vol. 91, no. 6. American Institute of Physics, 2015.
[Preprint] View | DOI | Download Preprint (ext.)
 
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Citation Style: IEEE

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