Innovations in spinal cord cell type heterogeneity across vertebrate evolution

Ignatyev Y, Papadopoulos S, Soretić M, Yeung J, Lin T-Y, Tanaka EM, Peshkin L, Levine AJ, Gabitto MI, Sweeney LB. Innovations in spinal cord cell type heterogeneity across vertebrate evolution. bioRxiv, 10.1101/2025.10.09.680955.

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Author
Ignatyev, Yuri; Papadopoulos, StavrosISTA; Soretić, Mateja; Yeung, JakeISTA ; Lin, Tzi-Yang; Tanaka, Elly M; Peshkin, Leonid; Levine, Ariel J; Gabitto, Mariano I; Sweeney, Lora B.ISTA

Corresponding author has ISTA affiliation

Abstract
Vertebrates display remarkable diversity of sensorimotor behaviors, each adapted to distinct ecological and survival demands. This diversity raises fundamental questions about the evolutionary origin of motor control: do conserved spinal circuits underlie these behaviors, and how have they diverged across species. Recent studies detail spinal cell-type architecture in mammals but comparable, high-resolution atlases of the non-mammalian spinal cord are lacking. Here, we compare spinal cord cell types between fish, frogs, mice and humans, spanning ∼450 million years of evolution. Across species, we define highly conserved programs of cell type specification that segregate spinal neurons into nearly identical cardinal classes during development. This contrasts with adult stages, when spinal cell-type composition selectively diverges for excitatory neuron subpopulations. Using spatial transcriptomics, we localize this species divergence to the superficial, dorsal spinal cord, where variant neuropeptide expression defines mammalian-specific cell types. The most dorsal spinal cord thus emerges as a recently evolved hub for sensory integration in mammals, a neospinal cord analogous to the neocortex.</jats:p>
Publishing Year
Date Published
2025-10-11
Journal Title
bioRxiv
Acknowledgement
We would like to thank the members of the Sweeney Lab for discussion and support; Andrey Bydanov for technical assistance with single-cell sequencing processing; and Jay Bikoff, Nikos Konstantinides, Maria Tosches, and Graziana Gatto for comments on the manuscript. This research was supported by: Horizon Europe ERC Starting Grant 101041551 (L.B.S, Y.I., S.P.); Special Research Program (SFB) of the Austrian Science Fund (FWF) F7814-B (L.B.S., S.P., E.M.T); Austrian Science Fund (FWF) 10.55776/COE16 (L.B.S., Y.I., E.M.T.); Austrian Academy of Sciences DOC Fellowship 27229 (S.P.); ERC Advanced Grant 742046 (E.M.T.); NIH award R24 OD031956 (L.P.); and in part by the Intramural Research Program of the National Institutes of Health (NIH) through 1ZIA NS003153 to A.J.L. The contributions of the NIH author are considered Works of the United States Government. The findings and conclusions presented in this paper are those of the authors and do not necessarily reflect the views of the NIH or the U.S. Department of Health and Human Services.
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Ignatyev Y, Papadopoulos S, Soretić M, et al. Innovations in spinal cord cell type heterogeneity across vertebrate evolution. bioRxiv. doi:10.1101/2025.10.09.680955
Ignatyev, Y., Papadopoulos, S., Soretić, M., Yeung, J., Lin, T.-Y., Tanaka, E. M., … Sweeney, L. B. (n.d.). Innovations in spinal cord cell type heterogeneity across vertebrate evolution. bioRxiv. https://doi.org/10.1101/2025.10.09.680955
Ignatyev, Yuri, Stavros Papadopoulos, Mateja Soretić, Jake Yeung, Tzi-Yang Lin, Elly M Tanaka, Leonid Peshkin, Ariel J Levine, Mariano I Gabitto, and Lora B. Sweeney. “Innovations in Spinal Cord Cell Type Heterogeneity across Vertebrate Evolution.” BioRxiv, n.d. https://doi.org/10.1101/2025.10.09.680955.
Y. Ignatyev et al., “Innovations in spinal cord cell type heterogeneity across vertebrate evolution,” bioRxiv. .
Ignatyev Y, Papadopoulos S, Soretić M, Yeung J, Lin T-Y, Tanaka EM, Peshkin L, Levine AJ, Gabitto MI, Sweeney LB. Innovations in spinal cord cell type heterogeneity across vertebrate evolution. bioRxiv, 10.1101/2025.10.09.680955.
Ignatyev, Yuri, et al. “Innovations in Spinal Cord Cell Type Heterogeneity across Vertebrate Evolution.” BioRxiv, doi:10.1101/2025.10.09.680955.
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