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242 Publications
2024 |
Published |
Journal Article |
IST-REx-ID: 18596 |
A decoy receptor derived from alternative splicing fine-tunes cytokinin signaling in Arabidopsis
M. Králová, I. Kubalová, J. Hajný, K. Kubiasova, K. Vagaská, Z. Ge, M.C. Gallei, H. Semerádová, A. Kuchařová, M. Hönig, A. Monzer, M. Kovačik, J. Friml, O. Novák, E. Benková, Y. Ikeda, D. Zalabák, Molecular Plant 17 (2024) 1850–1865.
[Published Version]
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M. Králová, I. Kubalová, J. Hajný, K. Kubiasova, K. Vagaská, Z. Ge, M.C. Gallei, H. Semerádová, A. Kuchařová, M. Hönig, A. Monzer, M. Kovačik, J. Friml, O. Novák, E. Benková, Y. Ikeda, D. Zalabák, Molecular Plant 17 (2024) 1850–1865.
2024 |
Published |
Thesis | PhD |
IST-REx-ID: 18674 |
Image analysis for brain tissue reconstruction with super-resolution light microscopy
J. Lyudchik, Image Analysis for Brain Tissue Reconstruction with Super-Resolution Light Microscopy, Institute of Science and Technology Austria, 2024.
[Published Version]
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J. Lyudchik, Image Analysis for Brain Tissue Reconstruction with Super-Resolution Light Microscopy, Institute of Science and Technology Austria, 2024.
2024 |
Draft |
Preprint |
IST-REx-ID: 18677 |
Light-microscopy based dense connectomic reconstruction of mammalian brain tissue
M. Tavakoli, J. Lyudchik, M. Januszewski, V. Vistunou, N. Agudelo Duenas, J. Vorlaufer, C.M. Sommer, C. Kreuzinger, B. Oliveira, A. Cenameri, G. Novarino, V. Jain, J.G. Danzl, BioRxiv (n.d.).
[Preprint]
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M. Tavakoli, J. Lyudchik, M. Januszewski, V. Vistunou, N. Agudelo Duenas, J. Vorlaufer, C.M. Sommer, C. Kreuzinger, B. Oliveira, A. Cenameri, G. Novarino, V. Jain, J.G. Danzl, BioRxiv (n.d.).
2024 |
Published |
Thesis | PhD |
IST-REx-ID: 18681
Developing molecular and structural tools for studying brain architecture with super resolution expansion microscopy. LICONN: Molecularly-informed connectomics reconstruction with light microscopy
M. Tavakoli, Developing Molecular and Structural Tools for Studying Brain Architecture with Super Resolution Expansion Microscopy. LICONN: Molecularly-Informed Connectomics Reconstruction with Light Microscopy, Institute of Science and Technology Austria, 2024.
[Published Version]
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M. Tavakoli, Developing Molecular and Structural Tools for Studying Brain Architecture with Super Resolution Expansion Microscopy. LICONN: Molecularly-Informed Connectomics Reconstruction with Light Microscopy, Institute of Science and Technology Austria, 2024.
2024 |
Draft |
Preprint |
IST-REx-ID: 18688 |
Human hippocampal CA3 uses specific functional connectivity rules for efficient associative memory
J.F. Watson, V. Vargas-Barroso, R.J. Morse-Mora, A. Navas-Olive, M. Tavakoli, J.G. Danzl, M. Tomschik, K. Rössler, P.M. Jonas, BioRxiv (n.d.).
[Preprint]
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J.F. Watson, V. Vargas-Barroso, R.J. Morse-Mora, A. Navas-Olive, M. Tavakoli, J.G. Danzl, M. Tomschik, K. Rössler, P.M. Jonas, BioRxiv (n.d.).
2024 |
Draft |
Preprint |
IST-REx-ID: 18689 |
Super-resolution expansion microscopy in plant roots
M.C. Gallei, S.M. Truckenbrodt, C. Kreuzinger, S. Inumella, V. Vistunou, C.M. Sommer, M. Tavakoli, N. Agudelo Duenas, J. Vorlaufer, W. Jahr, M. Randuch, A.J. Johnson, E. Benková, J. Friml, J.G. Danzl, BioRxiv (n.d.).
[Preprint]
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M.C. Gallei, S.M. Truckenbrodt, C. Kreuzinger, S. Inumella, V. Vistunou, C.M. Sommer, M. Tavakoli, N. Agudelo Duenas, J. Vorlaufer, W. Jahr, M. Randuch, A.J. Johnson, E. Benková, J. Friml, J.G. Danzl, BioRxiv (n.d.).
2024 |
Published |
Journal Article |
IST-REx-ID: 12875 |
Multipotent progenitors instruct ontogeny of the superior colliculus
G.T. Cheung, F. Pauler, P. Koppensteiner, T. Krausgruber, C. Streicher, M. Schrammel, N.Y. Özgen, A. Ivec, C. Bock, R. Shigemoto, S. Hippenmeyer, Neuron 112 (2024) 230–246.e11.
[Published Version]
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G.T. Cheung, F. Pauler, P. Koppensteiner, T. Krausgruber, C. Streicher, M. Schrammel, N.Y. Özgen, A. Ivec, C. Bock, R. Shigemoto, S. Hippenmeyer, Neuron 112 (2024) 230–246.e11.
2024 |
Submitted |
Preprint |
IST-REx-ID: 19520 |
Spinal neuron diversity scales exponentially with swim-to-limb transformation during frog metamorphosis
D. Vijatovic, F.A. Toma, Z.P. Harrington, C.M. Sommer, R. Hauschild, A.J. Trevisan, P. Chapman, M. Julseth, S. Brenner-Morton, M.I. Gabitto, J.S. Dasen, J.B. Bikoff, L.B. Sweeney, BioRxiv (n.d.).
[Preprint]
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D. Vijatovic, F.A. Toma, Z.P. Harrington, C.M. Sommer, R. Hauschild, A.J. Trevisan, P. Chapman, M. Julseth, S. Brenner-Morton, M.I. Gabitto, J.S. Dasen, J.B. Bikoff, L.B. Sweeney, BioRxiv (n.d.).
2024 |
Published |
Journal Article |
IST-REx-ID: 14794 |
Time-lapse imaging of cortical projection neuron migration in mice using mosaic analysis with double markers
A.H. Hansen, S. Hippenmeyer, STAR Protocols 5 (2024).
[Published Version]
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A.H. Hansen, S. Hippenmeyer, STAR Protocols 5 (2024).
2024 |
Published |
Journal Article |
IST-REx-ID: 14795 |
Adhesion-induced cortical flows pattern E-cadherin-mediated cell contacts
F.N. Arslan, E.B. Hannezo, J. Merrin, M. Loose, C.-P.J. Heisenberg, Current Biology 34 (2024) 171–182.e8.
[Published Version]
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F.N. Arslan, E.B. Hannezo, J. Merrin, M. Loose, C.-P.J. Heisenberg, Current Biology 34 (2024) 171–182.e8.
2024 |
Published |
Journal Article |
IST-REx-ID: 14846 |
Friction forces determine cytoplasmic reorganization and shape changes of ascidian oocytes upon fertilization
S. Caballero Mancebo, R. Shinde, M. Bolger-Munro, M. Peruzzo, G. Szep, I. Steccari, D. Labrousse Arias, V. Zheden, J. Merrin, A. Callan-Jones, R. Voituriez, C.-P.J. Heisenberg, Nature Physics 20 (2024) 310–321.
[Published Version]
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S. Caballero Mancebo, R. Shinde, M. Bolger-Munro, M. Peruzzo, G. Szep, I. Steccari, D. Labrousse Arias, V. Zheden, J. Merrin, A. Callan-Jones, R. Voituriez, C.-P.J. Heisenberg, Nature Physics 20 (2024) 310–321.
2024 |
Published |
Journal Article |
IST-REx-ID: 15048 |
Robust axis elongation by Nodal-dependent restriction of BMP signaling
A. Schauer, K. Pranjic-Ferscha, R. Hauschild, C.-P.J. Heisenberg, Development 151 (2024) 1–18.
[Published Version]
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A. Schauer, K. Pranjic-Ferscha, R. Hauschild, C.-P.J. Heisenberg, Development 151 (2024) 1–18.
2024 |
Published |
Journal Article |
IST-REx-ID: 15250 |
Orphan lysosomal solute carrier MFSD1 facilitates highly selective dipeptide transport
D. Boytsov, G.M. Madej, G. Horn, N. Blaha, T. Köcher, H.H. Sitte, D.E. Siekhaus, C. Ziegler, W. Sandtner, M. Roblek, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).
[Published Version]
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D. Boytsov, G.M. Madej, G. Horn, N. Blaha, T. Köcher, H.H. Sitte, D.E. Siekhaus, C. Ziegler, W. Sandtner, M. Roblek, Proceedings of the National Academy of Sciences of the United States of America 121 (2024).
2024 |
Published |
Journal Article |
IST-REx-ID: 15257 |
Rapid translocation of NGR proteins driving polarization of PIN-activating D6 protein kinase during root gravitropism
I. Kulich, J. Schmid, A. Teplova, L. Qi, J. Friml, ELife 12 (2024).
[Published Version]
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I. Kulich, J. Schmid, A. Teplova, L. Qi, J. Friml, ELife 12 (2024).
2024 |
Published |
Journal Article |
IST-REx-ID: 15301 |
Mechanical forces in plant tissue matrix orient cell divisions via microtubule stabilization
L. Hörmayer, J.C. Montesinos López, N. Trozzi, L. Spona, S. Yoshida, P. Marhavá, S. Caballero Mancebo, E. Benková, C.-P.J. Heisenberg, Y. Dagdas, M. Majda, J. Friml, Developmental Cell 59 (2024) 1333–1344.e4.
[Published Version]
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L. Hörmayer, J.C. Montesinos López, N. Trozzi, L. Spona, S. Yoshida, P. Marhavá, S. Caballero Mancebo, E. Benková, C.-P.J. Heisenberg, Y. Dagdas, M. Majda, J. Friml, Developmental Cell 59 (2024) 1333–1344.e4.
2024 |
Published |
Journal Article |
IST-REx-ID: 15330 |
Role of dynamin-related proteins 2 and SH3P2 in clathrin-mediated endocytosis in Arabidopsis thaliana
N. Gnyliukh, A.J. Johnson, M. Nagel, A. Monzer, D. Babic, A. Hlavata, S. Alotaibi, E. Isono, M. Loose, J. Friml, Journal of Cell Science 137 (2024).
[Published Version]
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N. Gnyliukh, A.J. Johnson, M. Nagel, A. Monzer, D. Babic, A. Hlavata, S. Alotaibi, E. Isono, M. Loose, J. Friml, Journal of Cell Science 137 (2024).
2024 |
Published |
Journal Article |
IST-REx-ID: 15375 |
Linker histone H1 drives heterochromatin condensation via phase separation in Arabidopsis
S. He, Y. Yu, L. Wang, J. Zhang, Z. Bai, G. Li, P. Li, X. Feng, The Plant Cell 36 (2024) 1829–1843.
[Published Version]
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S. He, Y. Yu, L. Wang, J. Zhang, Z. Bai, G. Li, P. Li, X. Feng, The Plant Cell 36 (2024) 1829–1843.
2024 |
Published |
Journal Article |
IST-REx-ID: 15381 |
Hippocampal cholecystokinin-expressing interneurons regulate temporal coding and contextual learning
D.K. Rangel Guerrero, K. Balueva, U. Barayeu, P. Baracskay, I. Gridchyn, M. Nardin, C.N. Roth, P. Wulff, J.L. Csicsvari, Neuron 112 (2024) 2045–2061.e10.
[Published Version]
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D.K. Rangel Guerrero, K. Balueva, U. Barayeu, P. Baracskay, I. Gridchyn, M. Nardin, C.N. Roth, P. Wulff, J.L. Csicsvari, Neuron 112 (2024) 2045–2061.e10.
2024 |
Research Data |
IST-REx-ID: 15385 |
Shared behavioural impairments in visual perception and place avoidance across different autism models are driven by periaqueductal grey hypoexcitability in Setd5 haploinsufficient mice
L. Burnett, P. Koppensteiner, O. Symonova, T. Masson, T.A. Vega Zuniga, X. Contreras, T. Rülicke, R. Shigemoto, G. Novarino, M.A. Jösch, (2024).
[Published Version]
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L. Burnett, P. Koppensteiner, O. Symonova, T. Masson, T.A. Vega Zuniga, X. Contreras, T. Rülicke, R. Shigemoto, G. Novarino, M.A. Jösch, (2024).
2024 |
Published |
Journal Article |
IST-REx-ID: 17187 |
Protocol for quantitative reconstruction of cell lineage using mosaic analysis with double markers in mice
G.T. Cheung, C. Streicher, S. Hippenmeyer, STAR Protocols 5 (2024).
[Published Version]
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G.T. Cheung, C. Streicher, S. Hippenmeyer, STAR Protocols 5 (2024).