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5080 Publications
2012 | Journal Article | IST-REx-ID: 9528
Regulation of biological accuracy, precision, and memory by plant chromatin organization
J.T. Huff, D. Zilberman, Current Opinion in Genetics and Development 22 (2012) 132–138.
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J.T. Huff, D. Zilberman, Current Opinion in Genetics and Development 22 (2012) 132–138.
2012 | Journal Article | IST-REx-ID: 2968 |
A likelihood based comparison of population histories in a parasitoid guild
K. Lohse, N.H. Barton, G. Melika, G. Stone, Molecular Ecology 21 (2012) 4605–4617.
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K. Lohse, N.H. Barton, G. Melika, G. Stone, Molecular Ecology 21 (2012) 4605–4617.
2012 | Research Data Reference | IST-REx-ID: 13075 |
Data from: A likelihood-based comparison of population histories in a parasitoid guild
K. Lohse, N.H. Barton, G. Stone, G. Melika, (2012).
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K. Lohse, N.H. Barton, G. Stone, G. Melika, (2012).
2012 | Conference Paper | IST-REx-ID: 10903
Accurate invariant checking for programs manipulating lists and arrays with infinite data
A. Bouajjani, C. Dragoi, C. Enea, M. Sighireanu, in:, Automated Technology for Verification and Analysis, Springer, Berlin, Heidelberg, 2012, pp. 167–182.
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A. Bouajjani, C. Dragoi, C. Enea, M. Sighireanu, in:, Automated Technology for Verification and Analysis, Springer, Berlin, Heidelberg, 2012, pp. 167–182.
2012 | Conference Paper | IST-REx-ID: 10905 |
Polynomial-time algorithms for energy games with special weight structures
K. Chatterjee, M.H. Henzinger, S. Krinninger, D. Nanongkai, in:, Algorithms – ESA 2012, Springer, 2012, pp. 301–312.
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K. Chatterjee, M.H. Henzinger, S. Krinninger, D. Nanongkai, in:, Algorithms – ESA 2012, Springer, 2012, pp. 301–312.
2012 | Conference Paper | IST-REx-ID: 10906 |
HSF(C): A software verifier based on Horn clauses
S. Grebenshchikov, A. Gupta, N.P. Lopes, C. Popeea, A. Rybalchenko, in:, C. Flanagan, B. König (Eds.), Tools and Algorithms for the Construction and Analysis of Systems, Springer, Berlin, Heidelberg, 2012, pp. 549–551.
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S. Grebenshchikov, A. Gupta, N.P. Lopes, C. Popeea, A. Rybalchenko, in:, C. Flanagan, B. König (Eds.), Tools and Algorithms for the Construction and Analysis of Systems, Springer, Berlin, Heidelberg, 2012, pp. 549–551.
2012 | Book Chapter | IST-REx-ID: 5745 |
Improved Single Pass Algorithms for Resolution Proof Reduction
A. Gupta, in:, Automated Technology for Verification and Analysis, Springer Berlin Heidelberg, Berlin, Heidelberg, 2012, pp. 107–121.
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A. Gupta, in:, Automated Technology for Verification and Analysis, Springer Berlin Heidelberg, Berlin, Heidelberg, 2012, pp. 107–121.
2012 | Conference Paper | IST-REx-ID: 3251 |
Ideal abstractions for well structured transition systems
D. Zufferey, T. Wies, T.A. Henzinger, in:, Springer, 2012, pp. 445–460.
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D. Zufferey, T. Wies, T.A. Henzinger, in:, Springer, 2012, pp. 445–460.
2012 | Journal Article | IST-REx-ID: 3157 |
The molecular evolution of acquired resistance to targeted EGFR blockade in colorectal cancers
L. Diaz Jr, R. Williams, J. Wu, I. Kinde, J. Hecht, J. Berlin, B. Allen, I. Božić, J. Reiter, M. Nowak, K. Kinzler, K. Oliner, B. Vogelstein, Nature 486 (2012) 537–540.
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L. Diaz Jr, R. Williams, J. Wu, I. Kinde, J. Hecht, J. Berlin, B. Allen, I. Božić, J. Reiter, M. Nowak, K. Kinzler, K. Oliner, B. Vogelstein, Nature 486 (2012) 537–540.
2012 | Journal Article | IST-REx-ID: 3260 |
Evolutionary dynamics of biological auctions
K. Chatterjee, J. Reiter, M. Nowak, Theoretical Population Biology 81 (2012) 69–80.
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K. Chatterjee, J. Reiter, M. Nowak, Theoretical Population Biology 81 (2012) 69–80.
2012 | Journal Article | IST-REx-ID: 3258 |
Active dendrites support efficient initiation of dendritic spikes in hippocampal CA3 pyramidal neurons
S. Kim, J. Guzmán, H. Hu, P.M. Jonas, Nature Neuroscience 15 (2012) 600–606.
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S. Kim, J. Guzmán, H. Hu, P.M. Jonas, Nature Neuroscience 15 (2012) 600–606.
2012 | Thesis | IST-REx-ID: 2964
Active properties of hippocampal CA3 pyramidal neuron dendrites
S. Kim, Active Properties of Hippocampal CA3 Pyramidal Neuron Dendrites, Institute of Science and Technology Austria, 2012.
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S. Kim, Active Properties of Hippocampal CA3 Pyramidal Neuron Dendrites, Institute of Science and Technology Austria, 2012.
2012 | Journal Article | IST-REx-ID: 3246
Cell adhesion in embryo morphogenesis
V. Barone, C.-P.J. Heisenberg, Current Opinion in Cell Biology 24 (2012) 148–153.
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V. Barone, C.-P.J. Heisenberg, Current Opinion in Cell Biology 24 (2012) 148–153.
2012 | Journal Article | IST-REx-ID: 12198 |
Active DNA demethylation in plant companion cells reinforces transposon methylation in gametes
C.A. Ibarra, X. Feng, V.K. Schoft, T.-F. Hsieh, R. Uzawa, J.A. Rodrigues, A. Zemach, N. Chumak, A. Machlicova, T. Nishimura, D. Rojas, R.L. Fischer, H. Tamaru, D. Zilberman, Science 337 (2012) 1360–1364.
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C.A. Ibarra, X. Feng, V.K. Schoft, T.-F. Hsieh, R. Uzawa, J.A. Rodrigues, A. Zemach, N. Chumak, A. Machlicova, T. Nishimura, D. Rojas, R.L. Fischer, H. Tamaru, D. Zilberman, Science 337 (2012) 1360–1364.
2012 | Journal Article | IST-REx-ID: 6588 |
Elementary solutions of the Bernstein problem on two intervals
F. Pausinger, Journal of Mathematical Physics, Analysis, Geometry 8 (2012) 63–78.
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F. Pausinger, Journal of Mathematical Physics, Analysis, Geometry 8 (2012) 63–78.
2012 | Conference Paper | IST-REx-ID: 3123 |
Explicit mesh surfaces for particle based fluids
J. Yu, C. Wojtan, G. Turk, C. Yap, in:, Computer Graphics Forum, Wiley, 2012, pp. 815–824.
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J. Yu, C. Wojtan, G. Turk, C. Yap, in:, Computer Graphics Forum, Wiley, 2012, pp. 815–824.
2012 | Journal Article | IST-REx-ID: 3244 |
Die Zeit des Abwartens ist vorbei!
P. Danowski, BuB - Forum Bibliothek und Information 64 (2012) 284.
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P. Danowski, BuB - Forum Bibliothek und Information 64 (2012) 284.
2012 | Journal Article | IST-REx-ID: 3243 |
Zwischen Technologie und Information
P. Danowski, Büchereiperspektiven 2012 (2012) 11.
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P. Danowski, Büchereiperspektiven 2012 (2012) 11.
2012 | Conference Paper | IST-REx-ID: 2915
Multi-modal learning for dynamic tactile sensing
O. Kroemer, C. Lampert, J. Peters, in:, Deutsches Zentrum für Luft und Raumfahrt, 2012.
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O. Kroemer, C. Lampert, J. Peters, in:, Deutsches Zentrum für Luft und Raumfahrt, 2012.
2012 | Journal Article | IST-REx-ID: 2912
On the configuration space for the shortest networks
H. Edelsbrunner, N. Strelkova, Russian Mathematical Surveys 67 (2012) 1167–1168.
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H. Edelsbrunner, N. Strelkova, Russian Mathematical Surveys 67 (2012) 1167–1168.
2012 | Conference Paper | IST-REx-ID: 3127 |
The most persistent soft-clique in a set of sampled graphs
N. Quadrianto, C. Lampert, C. Chen, in:, Proceedings of the 29th International Conference on Machine Learning, ML Research Press, 2012, pp. 211–218.
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N. Quadrianto, C. Lampert, C. Chen, in:, Proceedings of the 29th International Conference on Machine Learning, ML Research Press, 2012, pp. 211–218.
2012 | Journal Article | IST-REx-ID: 2904 |
Weak multipliers for generalized van der Corput sequences
F. Pausinger, Journal de Theorie Des Nombres Des Bordeaux 24 (2012) 729–749.
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F. Pausinger, Journal de Theorie Des Nombres Des Bordeaux 24 (2012) 729–749.
2012 | Journal Article | IST-REx-ID: 2902 |
Fractal and computational geometry for generalizing cartographic objects
H. Edelsbrunner, O. Musin, A. Ukhalov, O. Yakimova, V. Alexeev, V. Bogaevskaya, A. Gorohov, M. Preobrazhenskaya, Modeling and Analysis of Information Systems 19 (2012) 152–160.
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H. Edelsbrunner, O. Musin, A. Ukhalov, O. Yakimova, V. Alexeev, V. Bogaevskaya, A. Gorohov, M. Preobrazhenskaya, Modeling and Analysis of Information Systems 19 (2012) 152–160.
2011 | Conference Paper | IST-REx-ID: 3264
Solving recursion-free Horn clauses over LI+UIF
A. Gupta, C. Popeea, A. Rybalchenko, in:, H. Yang (Ed.), Springer, 2011, pp. 188–203.
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A. Gupta, C. Popeea, A. Rybalchenko, in:, H. Yang (Ed.), Springer, 2011, pp. 188–203.
2011 | Conference Paper | IST-REx-ID: 3266
Probabilistic joint image segmentation and labeling
A. Ion, J. Carreira, C. Sminchisescu, in:, NIPS Proceedings, Neural Information Processing Systems Foundation, 2011, pp. 1827–1835.
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A. Ion, J. Carreira, C. Sminchisescu, in:, NIPS Proceedings, Neural Information Processing Systems Foundation, 2011, pp. 1827–1835.
2011 | Journal Article | IST-REx-ID: 3269 |
Perceptual global illumination cancellation in complex projection environments
Y. Sheng, B. Cutler, C. Chen, J. Nasman, Computer Graphics Forum 30 (2011) 1261–1268.
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Y. Sheng, B. Cutler, C. Chen, J. Nasman, Computer Graphics Forum 30 (2011) 1261–1268.
2011 | Journal Article | IST-REx-ID: 3267
Hardness results for homology localization
C. Chen, D. Freedman, Discrete & Computational Geometry 45 (2011) 425–448.
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C. Chen, D. Freedman, Discrete & Computational Geometry 45 (2011) 425–448.
2011 | Journal Article | IST-REx-ID: 3288 |
Multicomponent analysis of junctional movements regulated by Myosin II isoforms at the epithelial zonula adherens
M. Smutny, S. Wu, G. Gomez, S. Mangold, A. Yap, N. Hamilton, PLoS One 6 (2011).
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M. Smutny, S. Wu, G. Gomez, S. Mangold, A. Yap, N. Hamilton, PLoS One 6 (2011).
2011 | Journal Article | IST-REx-ID: 3287
What can we learn from single molecule trajectories?
V. Ruprecht, M. Axmann, S. Wieser, G. Schuetz, Current Protein & Peptide Science 12 (2011) 714–724.
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V. Ruprecht, M. Axmann, S. Wieser, G. Schuetz, Current Protein & Peptide Science 12 (2011) 714–724.
2011 | Conference Paper | IST-REx-ID: 3302 |
Static scheduling in clouds
T.A. Henzinger, A. Singh, V. Singh, T. Wies, D. Zufferey, in:, USENIX, 2011, pp. 1–6.
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T.A. Henzinger, A. Singh, V. Singh, T. Wies, D. Zufferey, in:, USENIX, 2011, pp. 1–6.
2011 | Conference Paper | IST-REx-ID: 3301 |
Tail approximation for the chemical master equation
T.A. Henzinger, M. Mateescu, in:, Tampere International Center for Signal Processing, 2011.
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T.A. Henzinger, M. Mateescu, in:, Tampere International Center for Signal Processing, 2011.
2011 | Conference Paper | IST-REx-ID: 3299 |
Propagation models for computing biochemical reaction networks
T.A. Henzinger, M. Mateescu, in:, Springer, 2011, pp. 1–3.
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T.A. Henzinger, M. Mateescu, in:, Springer, 2011, pp. 1–3.
2011 | Conference Paper | IST-REx-ID: 3316 |
Specification-centered robustness
R. Bloem, K. Chatterjee, K. Greimel, T.A. Henzinger, B. Jobstmann, in:, 6th IEEE International Symposium on Industrial and Embedded Systems, IEEE, 2011, pp. 176–185.
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R. Bloem, K. Chatterjee, K. Greimel, T.A. Henzinger, B. Jobstmann, in:, 6th IEEE International Symposium on Industrial and Embedded Systems, IEEE, 2011, pp. 176–185.
2011 | Journal Article | IST-REx-ID: 3318 |
How the “slow” Ca(2+) buffer parvalbumin affects transmitter release in nanodomain coupling regimes at GABAergic synapses
E. Eggermann, P.M. Jonas, Nature Neuroscience 15 (2011) 20–22.
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E. Eggermann, P.M. Jonas, Nature Neuroscience 15 (2011) 20–22.
2011 | Book Chapter | IST-REx-ID: 3335 |
Alpha, Betti and the Megaparsec Universe: On the topology of the Cosmic Web
R. Van De Weygaert, G. Vegter, H. Edelsbrunner, B. Jones, P. Pranav, C. Park, W. Hellwing, B. Eldering, N. Kruithof, P. Bos, J. Hidding, J. Feldbrugge, E. Ten Have, M. Van Engelen, M. Caroli, M. Teillaud, in:, M. Gavrilova, K. Tan, M. Mostafavi (Eds.), Transactions on Computational Science XIV, Springer, 2011, pp. 60–101.
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R. Van De Weygaert, G. Vegter, H. Edelsbrunner, B. Jones, P. Pranav, C. Park, W. Hellwing, B. Eldering, N. Kruithof, P. Bos, J. Hidding, J. Feldbrugge, E. Ten Have, M. Van Engelen, M. Caroli, M. Teillaud, in:, M. Gavrilova, K. Tan, M. Mostafavi (Eds.), Transactions on Computational Science XIV, Springer, 2011, pp. 60–101.
2011 | Conference Paper | IST-REx-ID: 3329 |
Deconstructing approximate offsets
E. Berberich, D. Halperin, M. Kerber, R. Pogalnikova, in:, Proceedings of the Twenty-Seventh Annual Symposium on Computational Geometry, ACM, 2011, pp. 187–196.
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E. Berberich, D. Halperin, M. Kerber, R. Pogalnikova, in:, Proceedings of the Twenty-Seventh Annual Symposium on Computational Geometry, ACM, 2011, pp. 187–196.
2011 | Journal Article | IST-REx-ID: 3332 |
A note on the complexity of real algebraic hypersurfaces
M. Kerber, M. Sagraloff, Graphs and Combinatorics 27 (2011) 419–430.
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M. Kerber, M. Sagraloff, Graphs and Combinatorics 27 (2011) 419–430.
2011 | Conference Paper | IST-REx-ID: 3330 |
Root refinement for real polynomials
M. Kerber, M. Sagraloff, in:, Springer, 2011, pp. 209–216.
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M. Kerber, M. Sagraloff, in:, Springer, 2011, pp. 209–216.
2011 | Conference Paper | IST-REx-ID: 3328 |
A generic algebraic kernel for non linear geometric applications
E. Berberich, M. Hemmer, M. Kerber, in:, ACM, 2011, pp. 179–186.
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E. Berberich, M. Hemmer, M. Kerber, in:, ACM, 2011, pp. 179–186.
2011 | Journal Article | IST-REx-ID: 3334
Letter from the new editors-in-chief
H. Edelsbrunner, J. Pach, G. Ziegler, Discrete & Computational Geometry 45 (2011) 1–2.
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H. Edelsbrunner, J. Pach, G. Ziegler, Discrete & Computational Geometry 45 (2011) 1–2.
2011 | Journal Article | IST-REx-ID: 3353 |
A theory of synchronous relational interfaces
S. Tripakis, B. Lickly, T.A. Henzinger, E. Lee, ACM Transactions on Programming Languages and Systems (TOPLAS) 33 (2011).
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S. Tripakis, B. Lickly, T.A. Henzinger, E. Lee, ACM Transactions on Programming Languages and Systems (TOPLAS) 33 (2011).
2011 | Conference Paper | IST-REx-ID: 3355 |
Quantitative evaluation of BFT protocols
R. Halalai, T.A. Henzinger, V. Singh, in:, IEEE, 2011, pp. 255–264.
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R. Halalai, T.A. Henzinger, V. Singh, in:, IEEE, 2011, pp. 255–264.
2011 | Conference Paper | IST-REx-ID: 3350
Minimum attention controller synthesis for omega regular objectives
K. Chatterjee, R. Majumdar, in:, U. Fahrenberg, S. Tripakis (Eds.), Springer, 2011, pp. 145–159.
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K. Chatterjee, R. Majumdar, in:, U. Fahrenberg, S. Tripakis (Eds.), Springer, 2011, pp. 145–159.
2011 | Conference Paper | IST-REx-ID: 3351 |
On memoryless quantitative objectives
K. Chatterjee, L. Doyen, R. Singh, in:, O. Owe, M. Steffen, J.A. Telle (Eds.), Springer, 2011, pp. 148–159.
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K. Chatterjee, L. Doyen, R. Singh, in:, O. Owe, M. Steffen, J.A. Telle (Eds.), Springer, 2011, pp. 148–159.
2011 | Journal Article | IST-REx-ID: 3354
Qualitative concurrent parity games
K. Chatterjee, L. De Alfaro, T.A. Henzinger, ACM Transactions on Computational Logic (TOCL) 12 (2011).
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K. Chatterjee, L. De Alfaro, T.A. Henzinger, ACM Transactions on Computational Logic (TOCL) 12 (2011).
2011 | Conference Paper | IST-REx-ID: 3349 |
A reduction from parity games to simple stochastic games
K. Chatterjee, N. Fijalkow, in:, EPTCS, 2011, pp. 74–86.
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K. Chatterjee, N. Fijalkow, in:, EPTCS, 2011, pp. 74–86.
2011 | Journal Article | IST-REx-ID: 3352
Biology as reactivity
J. Fisher, D. Harel, T.A. Henzinger, Communications of the ACM 54 (2011) 72–82.
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J. Fisher, D. Harel, T.A. Henzinger, Communications of the ACM 54 (2011) 72–82.
2011 | Conference Paper | IST-REx-ID: 3362 |
Dynamic reactive modules
J. Fisher, T.A. Henzinger, D. Nickovic, N. Piterman, A. Singh, M. Vardi, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2011, pp. 404–418.
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J. Fisher, T.A. Henzinger, D. Nickovic, N. Piterman, A. Singh, M. Vardi, in:, Schloss Dagstuhl - Leibniz-Zentrum für Informatik, 2011, pp. 404–418.
2011 | Conference Paper | IST-REx-ID: 3365 |
QUASY: quantitative synthesis tool
K. Chatterjee, T.A. Henzinger, B. Jobstmann, R. Singh, in:, Springer, 2011, pp. 267–271.
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K. Chatterjee, T.A. Henzinger, B. Jobstmann, R. Singh, in:, Springer, 2011, pp. 267–271.
2011 | Conference Paper | IST-REx-ID: 3367
An output sensitive algorithm for persistent homology
C. Chen, M. Kerber, in:, ACM, 2011, pp. 207–216.
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C. Chen, M. Kerber, in:, ACM, 2011, pp. 207–216.