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5055 Publications

2011 | Technical Report | IST-REx-ID: 5386 | OA
Chen, C., Freedman, D., & Lampert, C. (2011). Enforcing topological constraints in random field image segmentation. IST Austria. https://doi.org/10.15479/AT:IST-2011-0002
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2011 | Technical Report | IST-REx-ID: 5383 | OA
Wies, T., Muñiz, M., & Kuncak, V. (2011). On an efficient decision procedure for imperative tree data structures. IST Austria. https://doi.org/10.15479/AT:IST-2011-0005
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2011 | Technical Report | IST-REx-ID: 5384 | OA
Chatterjee, K., & Tracol, M. (2011). Decidable problems for probabilistic automata on infinite words. IST Austria. https://doi.org/10.15479/AT:IST-2011-0004
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2011 | Conference Paper | IST-REx-ID: 3336
Chen, C., Freedman, D., & Lampert, C. (2011). Enforcing topological constraints in random field image segmentation. In CVPR: Computer Vision and Pattern Recognition (pp. 2089–2096). Colorado Springs, CO, United States: IEEE. https://doi.org/10.1109/CVPR.2011.5995503
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2011 | Conference Paper | IST-REx-ID: 3323
Wies, T., Muñiz, M., & Kuncak, V. (2011). An efficient decision procedure for imperative tree data structures (Vol. 6803, pp. 476–491). Presented at the CADE 23: Automated Deduction , Wrocław, Poland: Springer. https://doi.org/10.1007/978-3-642-22438-6_36
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2011 | Conference Paper | IST-REx-ID: 3366 | OA
Cerny, P., Chatterjee, K., Henzinger, T. A., Radhakrishna, A., & Singh, R. (2011). Quantitative synthesis for concurrent programs. In G. Gopalakrishnan & S. Qadeer (Eds.) (Vol. 6806, pp. 243–259). Presented at the CAV: Computer Aided Verification, Snowbird, USA: Springer. https://doi.org/10.1007/978-3-642-22110-1_20
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2011 | Conference Paper | IST-REx-ID: 3345 | OA
Chatterjee, K., & Doyen, L. (2011). Energy and mean-payoff parity Markov Decision Processes (Vol. 6907, pp. 206–218). Presented at the MFCS: Mathematical Foundations of Computer Science, Warsaw, Poland: Springer. https://doi.org/10.1007/978-3-642-22993-0_21
[Preprint] View | Files available | DOI | Download Preprint (ext.) | arXiv
 
2011 | Technical Report | IST-REx-ID: 5387 | OA
Chatterjee, K., & Doyen, L. (2011). Energy and mean-payoff parity Markov decision processes. IST Austria. https://doi.org/10.15479/AT:IST-2011-0001
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2011 | Journal Article | IST-REx-ID: 6496 | OA
Park, H., Oikonomou, P., Guet, C. C., & Cluzel, P. (2011). Noise underlies switching behavior of the bacterial flagellum. Biophysical Journal. Elsevier. https://doi.org/10.1016/j.bpj.2011.09.040
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2011 | Journal Article | IST-REx-ID: 9483 | OA
Hsieh, T.-F., Shin, J., Uzawa, R., Silva, P., Cohen, S., Bauer, M. J., … Fischer, R. L. (2011). Regulation of imprinted gene expression in Arabidopsis endosperm. Proceedings of the National Academy of Sciences. National Academy of Sciences. https://doi.org/10.1073/pnas.1019273108
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2011 | Other Publication | IST-REx-ID: 9522 | OA
Zilberman, D. (2011). Balancing parental contributions in plant embryonic gene activation. Developmental Cell (Vol. 20, pp. 735–736). Elsevier. https://doi.org/10.1016/j.devcel.2011.05.018
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2011 | Conference Paper | IST-REx-ID: 9648 | OA
Gonzalez-Diaz, R., Ion, A., Jimenez, M. J., & Poyatos, R. (2011). Incremental-decremental algorithm for computing AT-models and persistent homology. In Computer Analysis of Images and Patterns (Vol. 6854, pp. 286–293). Seville, Spain: Springer Nature. https://doi.org/10.1007/978-3-642-23672-3_35
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2011 | Journal Article | IST-REx-ID: 3395
Palero, F., Abello, P., Macpherson, E., Beaumont, M., & Pascual, M. (2011). Effect of oceanographic barriers and overfishing on the population genetic structure of the European spiny lobster Palinurus elephas. Biological Journal of the Linnean Society. Wiley-Blackwell. https://doi.org/10.1111/j.1095-8312.2011.01728.x
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2011 | Research Data Reference | IST-REx-ID: 9762 | OA
Palero, F., Abello, P., Macpherson, E., Beaumont, M., & Pascual, M. (2011). Data from: Effect of oceanographic barriers and overfishing on the population genetic structure of the European spiny lobster (Palinurus elephas). IST Austria. https://doi.org/10.5061/dryad.299h8
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2011 | Conference Paper | IST-REx-ID: 9943 | OA
Sommer, C. M., Straehle, C., Köthe, U., & Hamprecht, F. A. (2011). Ilastik: Interactive learning and segmentation toolkit. In 2011 IEEE International Symposium on Biomedical Imaging: from Nano to Micro. Chicago, Illinois, USA: Institute of Electrical and Electronics Engineers. https://doi.org/10.1109/isbi.2011.5872394
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2011 | Conference Paper | IST-REx-ID: 10907
Artner, N. M., Ion, A., & Kropatsch, W. G. (2011). Spatio-temporal extraction of articulated models in a graph pyramid. In X. Jiang, M. Ferrer, & A. Torsello (Eds.), Graph-Based Representations in Pattern Recognition (Vol. 6658, pp. 215–224). Berlin, Heidelberg: Springer. https://doi.org/10.1007/978-3-642-20844-7_22
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2011 | Thesis | IST-REx-ID: 3275 | OA
Schumann, K. (2011). The role of chemotactic gradients in dendritic cell migration. Institute of Science and Technology Austria.
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2011 | Thesis | IST-REx-ID: 3273
Maître, J.-L. (2011). Mechanics of adhesion and de‐adhesion in zebrafish germ layer progenitors. Institute of Science and Technology Austria.
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2011 | Journal Article | IST-REx-ID: 3392
Soriano, S., Hons, M., Schumann, K., Kumar, V., Dennier, T., Lyck, R., … Stein, J. (2011). In vivo analysis of uropod function during physiological T cell trafficking. Journal of Immunology. American Association of Immunologists. https://doi.org/10.4049/jimmunol.1100935
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2011 | Conference Paper | IST-REx-ID: 3163
Lampert, C. (2011). Maximum margin multi-label structured prediction. Presented at the NIPS: Neural Information Processing Systems, Granada, Spain: Neural Information Processing Systems.
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2011 | Conference Poster | IST-REx-ID: 3322
Lampert, C. (2011). Maximum margin multi label structured prediction. NIPS: Neural Information Processing Systems. Neural Information Processing Systems Foundation.
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2011 | Journal Article | IST-REx-ID: 3320 | OA
Nowozin, S., & Lampert, C. (2011). Structured learning and prediction in computer vision. Foundations and Trends in Computer Graphics and Vision. Now Publishers. https://doi.org/10.1561/0600000033
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2011 | Conference Paper | IST-REx-ID: 3319
Quadrianto, N., & Lampert, C. (2011). Learning multi-view neighborhood preserving projections (pp. 425–432). Presented at the ICML: International Conference on Machine Learning, Bellevue, United States: ML Research Press.
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2011 | Journal Article | IST-REx-ID: 3373 | OA
Jahnel, M., Behrndt, M., Jannasch, A., Schaeffer, E., & Grill, S. (2011). Measuring the complete force field of an optical trap. Optics Letters. Optica Publishing Group. https://doi.org/10.1364/OL.36.001260
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2011 | Journal Article | IST-REx-ID: 3375 | OA
de Vladar, H., & Barton, N. H. (2011). The statistical mechanics of a polygenic character under stabilizing selection mutation and drift. Journal of the Royal Society Interface. The Royal Society. https://doi.org/10.1098/rsif.2010.0438
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2011 | Journal Article | IST-REx-ID: 3393 | OA
Barton, N. H., & Turelli, M. (2011). Spatial waves of advance with bistable dynamics: Cytoplasmic and genetic analogues of Allee effects. American Naturalist. The University of Chicago Press. https://doi.org/10.1086/661246
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2010 | Conference Paper | IST-REx-ID: 10908 | OA
Blanc, R., Henzinger, T. A., Hottelier, T., & Kovács, L. (2010). ABC: Algebraic Bound Computation for loops. In E. M. Clarke & A. Voronkov (Eds.), Logic for Programming, Artificial Intelligence, and Reasoning (Vol. 6355, pp. 103–118). Berlin, Heidelberg: Springer Nature. https://doi.org/10.1007/978-3-642-17511-4_7
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2010 | Journal Article | IST-REx-ID: 2409 | OA
Kupczok, A., Schmidt, H., & Von Haeseler, A. (2010). Accuracy of phylogeny reconstruction methods combining overlapping gene data sets . Algorithms for Molecular Biology. BioMed Central. https://doi.org/10.1186/1748-7188-5-37
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2010 | Conference Paper | IST-REx-ID: 10909
Chen, C., & Freedman, D. (2010). Hardness results for homology localization. In Proceedings of the 2010 Annual ACM-SIAM Symposium on Discrete Algorithms (pp. 1594–1604). Austin, TX, United States: Society for Industrial and Applied Mathematics. https://doi.org/10.1137/1.9781611973075.129
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2010 | Journal Article | IST-REx-ID: 3303 | OA
Weissman, D., Feldman, M., & Fisher, D. (2010). The rate of fitness-valley crossing in sexual populations. Genetics. Genetics Society of America. https://doi.org/10.1534/genetics.110.123240
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2010 | Journal Article | IST-REx-ID: 3604
Senn, H., Goodman, S., Swanson, G., Barton, N. H., & Pemberton, J. (2010). Investigating temporal changes in hybridisation and introgression between invasive sika (Cervus nippon) and native red deer (Cervus elaphus) on the Kintyre Peninsula, Scotland. Molecular Ecology. Wiley-Blackwell. https://doi.org/10.1111/j.1365-294X.2009.04497.x
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2010 | Conference Paper | IST-REx-ID: 3719 | OA
Feret, J., Henzinger, T. A., Koeppl, H., & Petrov, T. (2010). Lumpability abstractions of rule-based systems (Vol. 40, pp. 142–161). Presented at the MECBIC: Membrane Computing and Biologically Inspired Process Calculi, Jena, Germany: Open Publishing Association.
[Submitted Version] View | Files available | arXiv
 
2010 | Journal Article | IST-REx-ID: 3718
Guzmán, J., Schmidt, H., Franke, H., Krügel, U., Eilers, J., Illes, P., & Gerevich, Z. (2010). P2Y1 receptors inhibit long-term depression in the prefrontal cortex. Neuropharmacology. Elsevier. https://doi.org/10.1016/j.neuropharm.2010.05.013
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2010 | Journal Article | IST-REx-ID: 3783
Palero, F., González Candelas, F., & Pascual, M. (2010). Microsatelight – Pipeline to expedite microsatellite analysis. Journal of Heredity. Oxford University Press. https://doi.org/10.1093/jhered/esq111
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2010 | Conference Paper | IST-REx-ID: 3782
Chen, C., & Freedman, D. (2010). Topology noise removal for curve  and surface evolution. In Conference proceedings MCV 2010 (Vol. 6533, pp. 31–42). Beijing, China: Springer. https://doi.org/10.1007/978-3-642-18421-5_4
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2010 | Book Chapter | IST-REx-ID: 3795 | OA
Edelsbrunner, H., Morozov, D., & Patel, A. (2010). The stability of the apparent contour of an orientable 2-manifold. In Topological Data Analysis and Visualization: Theory, Algorithms and Applications (pp. 27–42). Springer. https://doi.org/10.1007/978-3-642-15014-2_3
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2010 | Conference Paper | IST-REx-ID: 3794
Lampert, C., & Krömer, O. (2010). Weakly-paired maximum covariance analysis for multimodal dimensionality reduction and transfer learning (Vol. 6312, pp. 566–579). Presented at the ECCV: European Conference on Computer Vision, Heraklion, Crete, Greece: Springer. https://doi.org/10.1007/978-3-642-15552-9_41
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2010 | Journal Article | IST-REx-ID: 3832 | OA
Guzmán, J., & Jonas, P. M. (2010). Beyond TARPs: The growing list of auxiliary AMPAR subunits. Neuron. Elsevier. https://doi.org/10.1016/j.neuron.2010.04.003
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2010 | Journal Article | IST-REx-ID: 3833
Jonas, P. M., & Hefft, S. (2010). GABA release at terminals of CCK-interneurons: synchrony, asynchrony and modulation by cannabinoid receptors (commentary on Ali & Todorova). The European Journal of Neuroscience. Wiley-Blackwell. https://doi.org/10.1111/j.1460-9568.2010.07189.x
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2010 | Conference Paper | IST-REx-ID: 3847 | OA
Didier, F., Henzinger, T. A., Mateescu, M., & Wolf, V. (2010). SABRE: A tool for the stochastic analysis of biochemical reaction networks (pp. 193–194). Presented at the QEST: Quantitative Evaluation of Systems, Williamsburg, USA: IEEE. https://doi.org/10.1109/QEST.2010.33
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2010 | Conference Paper | IST-REx-ID: 3845 | OA
Henzinger, T. A., Hottelier, T., Kovács, L., & Rybalchenko, A. (2010). Aligators for arrays (Vol. 6397, pp. 348–356). Presented at the LPAR: Logic for Programming, Artificial Intelligence, and Reasoning, Yogyakarta, Indonesia: Springer. https://doi.org/10.1007/978-3-642-16242-8_25
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2010 | Journal Article | IST-REx-ID: 3842 | OA
Didier, F., Henzinger, T. A., Mateescu, M., & Wolf, V. (2010). Fast adaptive uniformization of the chemical master equation. IET Systems Biology. Institution of Engineering and Technology. https://doi.org/10.1049/iet-syb.2010.0005
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2010 | Conference Paper | IST-REx-ID: 3848
Bendich, P., Edelsbrunner, H., Morozov, D., & Patel, A. (2010). The robustness of level sets (Vol. 6346, pp. 1–10). Presented at the ESA: European Symposium on Algorithms, Liverpool, UK: Springer. https://doi.org/10.1007/978-3-642-15775-2_1
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2010 | Conference Paper | IST-REx-ID: 3858 | OA
Chatterjee, K., & Doyen, L. (2010). The complexity of partial-observation parity games (Vol. 6397, pp. 1–14). Presented at the LPAR: Logic for Programming, Artificial Intelligence, and Reasoning, Yogyakarta, Indonesia: Springer. https://doi.org/10.1007/978-3-642-16242-8_1
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2010 | Conference Paper | IST-REx-ID: 3856 | OA
Chatterjee, K., Doyen, L., Gimbert, H., & Henzinger, T. A. (2010). Randomness for free (Vol. 6281, pp. 246–257). Presented at the MFCS: Mathematical Foundations of Computer Science, Brno, Czech Republic: Springer. https://doi.org/10.1007/978-3-642-15155-2_23
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2010 | Conference (Editor) | IST-REx-ID: 3859
Chatterjee, K., & Henzinger, T. A. (Eds.). (2010). Formal modeling and analysis of timed systems (Vol. 6246). Presented at the FORMATS: Formal Modeling and Analysis of Timed Systems, Klosterneuburg, Austria: Springer. https://doi.org/10.1007/978-3-642-15297-9
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2010 | Conference Paper | IST-REx-ID: 3866 | OA
Bloem, R., Chatterjee, K., Greimel, K., Henzinger, T. A., & Jobstmann, B. (2010). Robustness in the presence of liveness. In T. Touili, B. Cook, & P. Jackson (Eds.) (Vol. 6174, pp. 410–424). Presented at the CAV: Computer Aided Verification, Edinburgh, UK: Springer. https://doi.org/10.1007/978-3-642-14295-6_36
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2010 | Journal Article | IST-REx-ID: 3868 | OA
Chatterjee, K., De Alfaro, L., Majumdar, R., & Raman, V. (2010). Algorithms for game metrics. Logical Methods in Computer Science. International Federation of Computational Logic. https://doi.org/10.2168/LMCS-6(3:13)2010
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2010 | Journal Article | IST-REx-ID: 4134
Bridle, J., Polechova, J., Kawata, M., & Butlin, R. (2010). Why is adaptation prevented at ecological margins? New insights from individual-based simulations. Ecology Letters. Wiley-Blackwell. https://doi.org/10.1111/j.1461-0248.2010.01442.x
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2010 | Journal Article | IST-REx-ID: 4243 | OA
Barton, N. H., Etheridge, A., & Véber, A. (2010). A new model for evolution in a spatial continuum. Electronic Journal of Probability. Institute of Mathematical Statistics. https://doi.org/10.1214/EJP.v15-741
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